diff --git a/articles/api.html b/articles/api.html index beb252c9..31139d5c 100644 --- a/articles/api.html +++ b/articles/api.html @@ -134,7 +134,7 @@
vis_toil_TvsN(Gene = "TP53", Mode = "Violinplot", Show.P.value = FALSE, Show.P.label = FALSE)
-#> Reading cache data /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
+#> Reading cache data /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
#> Try querying data #1
#> Try querying data #2
#> Try querying data #3
@@ -185,7 +185,7 @@ Visualize Single Gen
#> Try querying data #5
#> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or
#> your internet connection or try it later!
-#> Saving data to file /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
+#> Saving data to file /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
#> More info about dataset please run following commands:
#> library(UCSCXenaTools)
#> XenaGenerate(subset = XenaDatasets == "TcgaTargetGtex_rsem_gene_tpm") %>% XenaBrowse()
@@ -207,7 +207,7 @@ Compare Gene Expres
TCGA.only = FALSE,
Cancer = "ACC"
)
-#> Reading cache data /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
+#> Reading cache data /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
#> Try querying data #1
#> Try querying data #2
#> Try querying data #3
@@ -215,7 +215,7 @@ Compare Gene Expres
#> Try querying data #5
#> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or
#> your internet connection or try it later!
-#> Saving data to file /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
+#> Saving data to file /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
#> More info about dataset please run following commands:
#> library(UCSCXenaTools)
#> XenaGenerate(subset = XenaDatasets == "TcgaTargetGtex_rsem_gene_tpm") %>% XenaBrowse()
@@ -245,7 +245,7 @@ = "OS",
values = c("grey", "#E31A1C", "#377DB8")
)
-#> Reading cache data /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
+#> Reading cache data /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
#> Try querying data #1
#> Try querying data #2
#> Try querying data #3
@@ -253,7 +253,7 @@ #> Try querying data #5
#> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or
#> your internet connection or try it later!
-#> Saving data to file /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
+#> Saving data to file /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds
#> More info about dataset please run following commands:
#> library(UCSCXenaTools)
#> XenaGenerate(subset = XenaDatasets == "TcgaTargetGtex_rsem_gene_tpm") %>% XenaBrowse()
diff --git a/index.html b/index.html
index 78df1b1f..810a857e 100644
--- a/index.html
+++ b/index.html
@@ -60,15 +60,22 @@
-
Please cite the following article when you used UCSCXenaShiny in your study:
+Please cite any of the following articles when you used UCSCXenaShiny in your study:
-Shixiang Wang#, Yi Xiong#, Longfei Zhao#, Kai Gu#, Yin Li, Fei Zhao, Jianfeng Li, Mingjie Wang, Haitao Wang, Ziyu Tao, Tao Wu, Yichao Zheng, Xuejun Li, Xue-Song Liu, UCSCXenaShiny: An R/CRAN Package for Interactive Analysis of UCSC Xena Data, Bioinformatics, 2021;, btab561, https://doi.org/10.1093/bioinformatics/btab561.
+V2
+
+- Li S, et al. UCSCXenaShiny v2: Facilitating Integrative and Personalized Oncology Omics Analysis. 2024 (In preparation)
+
+V1
+
+- Shixiang Wang#, Yi Xiong#, Longfei Zhao#, Kai Gu#, Yin Li, Fei Zhao, Jianfeng Li, Mingjie Wang, Haitao Wang, Ziyu Tao, Tao Wu, Yichao Zheng, Xuejun Li, Xue-Song Liu, UCSCXenaShiny: An R/CRAN Package for Interactive Analysis of UCSC Xena Data, Bioinformatics, 2021;, btab561, https://doi.org/10.1093/bioinformatics/btab561.
+
☁️ Use on cloud
-If you don’t want to install R and packages locally, or you have no programming experience, try using this tool on Oncoharmony Network
(<http://shiny.zhoulab.ac.cn/UCSCXenaShiny>
) or Hiplot ORG
platform (<https://shiny.hiplot.cn/ucsc-xena-shiny>
).
+If you don’t want to install R and packages locally, or you have no programming experience, try using this tool on Oncoharmony Network
(http://shiny.zhoulab.ac.cn/UCSCXenaShiny
) or Hiplot ORG
platform (https://shiny.hiplot.cn/ucsc-xena-shiny
).
We have deployed two additional apps: a basic version of V2 (https://shiny.zhoulab.ac.cn/UCSCXenaShiny_basic/
) and an archive version of V1 (https://shiny.zhoulab.ac.cn/UCSCXenaShinyV1/
, code please see v1 branch).
diff --git a/pkgdown.yml b/pkgdown.yml
index d7db4bfb..2fd8710c 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -3,7 +3,7 @@ pkgdown: 2.1.0
pkgdown_sha: ~
articles:
api: api.html
-last_built: 2024-07-28T06:03Z
+last_built: 2024-07-28T06:05Z
urls:
reference: https://openbiox.github.io/UCSCXenaShiny/reference
article: https://openbiox.github.io/UCSCXenaShiny/articles
diff --git a/search.json b/search.json
index 155fe7fc..63de9923 100644
--- a/search.json
+++ b/search.json
@@ -1 +1 @@
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YES: edit roxygen comment .R file R/. : edit .Rd file man/.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"prerequisites","dir":"","previous_headings":"","what":"Prerequisites","title":"Contributing to UCSCXenaShiny","text":"make substantial pull request, always file issue make sure someone team agrees ’s problem. ’ve found bug, create associated issue illustrate bug minimal reprex.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"pull-request-process","dir":"","previous_headings":"","what":"Pull request process","title":"Contributing to UCSCXenaShiny","text":"recommend create Git branch pull request (PR). Look Travis AppVeyor build status making changes. README contain badges continuous integration services used package. New code follow tidyverse style guide. can use styler package apply styles, please don’t restyle code nothing PR. use roxygen2, Markdown syntax, documentation. use testthat. Contributions test cases included easier accept. user-facing changes, add bullet top NEWS.md current development version header describing changes made followed GitHub username, links relevant issue(s)/PR(s).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"code-of-conduct","dir":"","previous_headings":"","what":"Code of Conduct","title":"Contributing to UCSCXenaShiny","text":"Please note UCSCXenaShiny project released Contributor Code Conduct. contributing project agree abide terms.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"see-tidyverse-development-contributing-guide","dir":"","previous_headings":"","what":"See tidyverse development contributing guide","title":"Contributing to UCSCXenaShiny","text":"details.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":null,"dir":"","previous_headings":"","what":"GNU General Public License","title":"GNU General Public License","text":"Version 3, 29 June 2007Copyright © 2007 Free Software Foundation, Inc. Everyone permitted copy distribute verbatim copies license document, changing allowed.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"preamble","dir":"","previous_headings":"","what":"Preamble","title":"GNU General Public License","text":"GNU General Public License free, copyleft license software kinds works. licenses software practical works designed take away freedom share change works. contrast, GNU General Public License intended guarantee freedom share change versions program–make sure remains free software users. , Free Software Foundation, use GNU General Public License software; applies also work released way authors. can apply programs, . speak free software, referring freedom, price. General Public Licenses designed make sure freedom distribute copies free software (charge wish), receive source code can get want , can change software use pieces new free programs, know can things. protect rights, need prevent others denying rights asking surrender rights. Therefore, certain responsibilities distribute copies software, modify : responsibilities respect freedom others. example, distribute copies program, whether gratis fee, must pass recipients freedoms received. must make sure , , receive can get source code. must show terms know rights. Developers use GNU GPL protect rights two steps: (1) assert copyright software, (2) offer License giving legal permission copy, distribute /modify . developers’ authors’ protection, GPL clearly explains warranty free software. users’ authors’ sake, GPL requires modified versions marked changed, problems attributed erroneously authors previous versions. devices designed deny users access install run modified versions software inside , although manufacturer can . fundamentally incompatible aim protecting users’ freedom change software. systematic pattern abuse occurs area products individuals use, precisely unacceptable. Therefore, designed version GPL prohibit practice products. problems arise substantially domains, stand ready extend provision domains future versions GPL, needed protect freedom users. Finally, every program threatened constantly software patents. States allow patents restrict development use software general-purpose computers, , wish avoid special danger patents applied free program make effectively proprietary. prevent , GPL assures patents used render program non-free. precise terms conditions copying, distribution modification follow.","code":""},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_0-definitions","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"0. 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Mere interaction user computer network, transfer copy, conveying. interactive user interface displays “Appropriate Legal Notices” extent includes convenient prominently visible feature (1) displays appropriate copyright notice, (2) tells user warranty work (except extent warranties provided), licensees may convey work License, view copy License. interface presents list user commands options, menu, prominent item list meets criterion.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_1-source-code","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"1. Source Code","title":"GNU General Public License","text":"“source code” work means preferred form work making modifications . “Object code” means non-source form work. “Standard Interface” means interface either official standard defined recognized standards body, , case interfaces specified particular programming language, one widely used among developers working language. “System Libraries” executable work include anything, work whole, () included normal form packaging Major Component, part Major Component, (b) serves enable use work Major Component, implement Standard Interface implementation available public source code form. “Major Component”, context, means major essential component (kernel, window system, ) specific operating system () executable work runs, compiler used produce work, object code interpreter used run . “Corresponding Source” work object code form means source code needed generate, install, (executable work) run object code modify work, including scripts control activities. However, include work’s System Libraries, general-purpose tools generally available free programs used unmodified performing activities part work. example, Corresponding Source includes interface definition files associated source files work, source code shared libraries dynamically linked subprograms work specifically designed require, intimate data communication control flow subprograms parts work. Corresponding Source need include anything users can regenerate automatically parts Corresponding Source. Corresponding Source work source code form work.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_2-basic-permissions","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"2. Basic Permissions","title":"GNU General Public License","text":"rights granted License granted term copyright Program, irrevocable provided stated conditions met. License explicitly affirms unlimited permission run unmodified Program. output running covered work covered License output, given content, constitutes covered work. License acknowledges rights fair use equivalent, provided copyright law. may make, run propagate covered works convey, without conditions long license otherwise remains force. may convey covered works others sole purpose make modifications exclusively , provide facilities running works, provided comply terms License conveying material control copyright. thus making running covered works must exclusively behalf, direction control, terms prohibit making copies copyrighted material outside relationship . Conveying circumstances permitted solely conditions stated . Sublicensing allowed; section 10 makes unnecessary.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_3-protecting-users-legal-rights-from-anti-circumvention-law","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"3. Protecting Users’ Legal Rights From Anti-Circumvention Law","title":"GNU General Public License","text":"covered work shall deemed part effective technological measure applicable law fulfilling obligations article 11 WIPO copyright treaty adopted 20 December 1996, similar laws prohibiting restricting circumvention measures. convey covered work, waive legal power forbid circumvention technological measures extent circumvention effected exercising rights License respect covered work, disclaim intention limit operation modification work means enforcing, work’s users, third parties’ legal rights forbid circumvention technological measures.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_4-conveying-verbatim-copies","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"4. 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License gives permission license work way, invalidate permission separately received . d) work interactive user interfaces, must display Appropriate Legal Notices; however, Program interactive interfaces display Appropriate Legal Notices, work need make . compilation covered work separate independent works, nature extensions covered work, combined form larger program, volume storage distribution medium, called “aggregate” compilation resulting copyright used limit access legal rights compilation’s users beyond individual works permit. Inclusion covered work aggregate cause License apply parts aggregate.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_6-conveying-non-source-forms","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"6. 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Regardless server hosts Corresponding Source, remain obligated ensure available long needed satisfy requirements. e) Convey object code using peer--peer transmission, provided inform peers object code Corresponding Source work offered general public charge subsection 6d. separable portion object code, whose source code excluded Corresponding Source System Library, need included conveying object code work. “User Product” either (1) “consumer product”, means tangible personal property normally used personal, family, household purposes, (2) anything designed sold incorporation dwelling. determining whether product consumer product, doubtful cases shall resolved favor coverage. particular product received particular user, “normally used” refers typical common use class product, regardless status particular user way particular user actually uses, expects expected use, product. product consumer product regardless whether product substantial commercial, industrial non-consumer uses, unless uses represent significant mode use product. “Installation Information” User Product means methods, procedures, authorization keys, information required install execute modified versions covered work User Product modified version Corresponding Source. information must suffice ensure continued functioning modified object code case prevented interfered solely modification made. convey object code work section , , specifically use , User Product, conveying occurs part transaction right possession use User Product transferred recipient perpetuity fixed term (regardless transaction characterized), Corresponding Source conveyed section must accompanied Installation Information. requirement apply neither third party retains ability install modified object code User Product (example, work installed ROM). requirement provide Installation Information include requirement continue provide support service, warranty, updates work modified installed recipient, User Product modified installed. Access network may denied modification materially adversely affects operation network violates rules protocols communication across network. Corresponding Source conveyed, Installation Information provided, accord section must format publicly documented (implementation available public source code form), must require special password key unpacking, reading copying.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_7-additional-terms","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"7. Additional Terms","title":"GNU General Public License","text":"“Additional permissions” terms supplement terms License making exceptions one conditions. Additional permissions applicable entire Program shall treated though included License, extent valid applicable law. additional permissions apply part Program, part may used separately permissions, entire Program remains governed License without regard additional permissions. convey copy covered work, may option remove additional permissions copy, part . (Additional permissions may written require removal certain cases modify work.) may place additional permissions material, added covered work, can give appropriate copyright permission. Notwithstanding provision License, material add covered work, may (authorized copyright holders material) supplement terms License terms: ) Disclaiming warranty limiting liability differently terms sections 15 16 License; b) Requiring preservation specified reasonable legal notices author attributions material Appropriate Legal Notices displayed works containing ; c) Prohibiting misrepresentation origin material, requiring modified versions material marked reasonable ways different original version; d) Limiting use publicity purposes names licensors authors material; e) Declining grant rights trademark law use trade names, trademarks, service marks; f) Requiring indemnification licensors authors material anyone conveys material (modified versions ) contractual assumptions liability recipient, liability contractual assumptions directly impose licensors authors. non-permissive additional terms considered “restrictions” within meaning section 10. Program received , part , contains notice stating governed License along term restriction, may remove term. license document contains restriction permits relicensing conveying License, may add covered work material governed terms license document, provided restriction survive relicensing conveying. add terms covered work accord section, must place, relevant source files, statement additional terms apply files, notice indicating find applicable terms. Additional terms, permissive non-permissive, may stated form separately written license, stated exceptions; requirements apply either way.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_8-termination","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"8. 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Therefore, modifying propagating covered work, indicate acceptance License .","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_10-automatic-licensing-of-downstream-recipients","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"10. 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Nothing License shall construed excluding limiting implied license defenses infringement may otherwise available applicable patent law.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_12-no-surrender-of-others-freedom","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"12. No Surrender of Others’ Freedom","title":"GNU General Public License","text":"conditions imposed (whether court order, agreement otherwise) contradict conditions License, excuse conditions License. convey covered work satisfy simultaneously obligations License pertinent obligations, consequence may convey . example, agree terms obligate collect royalty conveying convey Program, way satisfy terms License refrain entirely conveying Program.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_13-use-with-the-gnu-affero-general-public-license","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"13. 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Program specifies certain numbered version GNU General Public License “later version” applies , option following terms conditions either numbered version later version published Free Software Foundation. Program specify version number GNU General Public License, may choose version ever published Free Software Foundation. Program specifies proxy can decide future versions GNU General Public License can used, proxy’s public statement acceptance version permanently authorizes choose version Program. Later license versions may give additional different permissions. However, additional obligations imposed author copyright holder result choosing follow later version.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_15-disclaimer-of-warranty","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"15. Disclaimer of Warranty","title":"GNU General Public License","text":"WARRANTY PROGRAM, EXTENT PERGPLv3TED APPLICABLE LAW. EXCEPT OTHERWISE STATED WRITING COPYRIGHT HOLDERS /PARTIES PROVIDE PROGRAM “” WITHOUT WARRANTY KIND, EITHER EXPRESSED IMPLIED, INCLUDING, LIGPLv3ED , IMPLIED WARRANTIES MERCHANTABILITY FITNESS PARTICULAR PURPOSE. ENTIRE RISK QUALITY PERFORMANCE PROGRAM . PROGRAM PROVE DEFECTIVE, ASSUME COST NECESSARY SERVICING, REPAIR CORRECTION.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_16-limitation-of-liability","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"16. Limitation of Liability","title":"GNU General Public License","text":"EVENT UNLESS REQUIRED APPLICABLE LAW AGREED WRITING COPYRIGHT HOLDER, PARTY MODIFIES /CONVEYS PROGRAM PERGPLv3TED , LIABLE DAMAGES, INCLUDING GENERAL, SPECIAL, INCIDENTAL CONSEQUENTIAL DAMAGES ARISING USE INABILITY USE PROGRAM (INCLUDING LIGPLv3ED LOSS DATA DATA RENDERED INACCURATE LOSSES SUSTAINED THIRD PARTIES FAILURE PROGRAM OPERATE PROGRAMS), EVEN HOLDER PARTY ADVISED POSSIBILITY DAMAGES.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_17-interpretation-of-sections-15-and-16","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"17. Interpretation of Sections 15 and 16","title":"GNU General Public License","text":"disclaimer warranty limitation liability provided given local legal effect according terms, reviewing courts shall apply local law closely approximates absolute waiver civil liability connection Program, unless warranty assumption liability accompanies copy Program return fee. END TERMS CONDITIONS","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"how-to-apply-these-terms-to-your-new-programs","dir":"","previous_headings":"","what":"How to Apply These Terms to Your New Programs","title":"GNU General Public License","text":"develop new program, want greatest possible use public, best way achieve make free software everyone can redistribute change terms. , attach following notices program. safest attach start source file effectively state exclusion warranty; file least “copyright” line pointer full notice found. Also add information contact electronic paper mail. program terminal interaction, make output short notice like starts interactive mode: hypothetical commands show w show c show appropriate parts General Public License. course, program’s commands might different; GUI interface, use “box”. also get employer (work programmer) school, , sign “copyright disclaimer” program, necessary. information , apply follow GNU GPL, see . GNU General Public License permit incorporating program proprietary programs. program subroutine library, may consider useful permit linking proprietary applications library. want , use GNU Lesser General Public License instead License. first, please read .","code":" Copyright (C) This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see . UCSCXenaShiny Copyright (C) 2019 Openbiox XenaShiny team This program comes with ABSOLUTELY NO WARRANTY; for details type 'show w'. This is free software, and you are welcome to redistribute it under certain conditions; type 'show c' for details."},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"tutorial-book","dir":"Articles","previous_headings":"","what":"Tutorial Book","title":"Examples of Accessible Functions","text":"UCSCXenaShiny v2, provide comprehensive tutorial book introducing use datasets, functions, Shiny application.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-data","dir":"Articles","previous_headings":"","what":"Fetch Data","title":"Examples of Accessible Functions","text":"provide function retrieve multi-dimensional data including genomic, epigenomic, transcriptomic, proteomic data TCGA (note, actually contains data TCGA/TARGET/GTEx databases) CCLE Pan-Cancer dataset single identifier (e.g., gene, protein). Check parameters: TCGA gene expression data, use Xena dataset ID TcgaTargetGtex_rsem_gene_tpm includes 19131 samples tumor tissue samples normal tissue samples. expression value unit log2(tpm+0.001). Let’s check several examples.","code":"args(query_pancan_value) #> function (molecule, data_type = c(\"mRNA\", \"transcript\", \"protein\", #> \"mutation\", \"cnv\", \"methylation\", \"miRNA\", \"fusion\", \"promoter\", #> \"APOBEC\"), database = c(\"toil\", \"ccle\", \"pcawg\"), reset_id = NULL, #> opt_pancan = .opt_pancan) #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-gene-expression","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Gene Expression","title":"Examples of Accessible Functions","text":"","code":"gene_expr <- query_pancan_value(\"TP53\") #> ========================================================================================= #> UCSCXenaTools version 1.4.8 #> Project URL: https://github.com/ropensci/UCSCXenaTools #> Usages: https://cran.r-project.org/web/packages/UCSCXenaTools/vignettes/USCSXenaTools.html #> #> If you use it in published research, please cite: #> Wang et al., (2019). The UCSCXenaTools R package: a toolkit for accessing genomics data #> from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq. #> Journal of Open Source Software, 4(40), 1627, https://doi.org/10.21105/joss.01627 #> ========================================================================================= #> --Enjoy it-- #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() str(gene_expr) #> List of 2 #> $ expression: NULL #> $ unit : chr \"log2(tpm+0.001)\""},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-transcript-expression","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Transcript Expression","title":"Examples of Accessible Functions","text":"","code":"transcript_expr <- query_pancan_value(\"ENST00000000233\", data_type = \"transcript\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-gene-cnv","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Gene CNV","title":"Examples of Accessible Functions","text":"","code":"gene_cnv <- query_pancan_value(\"TP53\", data_type = \"cnv\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-gene-mutation","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Gene Mutation","title":"Examples of Accessible Functions","text":"","code":"gene_mut <- query_pancan_value(\"TP53\", data_type = \"mutation\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-mirna-mature-strand-expression","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch miRNA mature strand expression","title":"Examples of Accessible Functions","text":"","code":"miRNA_expr <- query_pancan_value(\"hsa-let-7a-2-3p\", data_type = \"miRNA\")"},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"visualize-single-gene-expression-in-pancan-dataset","dir":"Articles","previous_headings":"Data Visualization","what":"Visualize Single Gene Expression in PANCAN Dataset","title":"Examples of Accessible Functions","text":"","code":"vis_toil_TvsN(Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = FALSE, Show.P.label = FALSE) #> Reading cache data /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() #> Warning in vis_toil_TvsN(Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = #> FALSE, : No data available #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"compare-gene-expression-level-in-single-cancer-type","dir":"Articles","previous_headings":"Data Visualization","what":"Compare Gene Expression Level in Single Cancer Type","title":"Examples of Accessible Functions","text":"","code":"vis_toil_TvsN_cancer( Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = TRUE, Show.P.label = TRUE, Method = \"wilcox.test\", values = c(\"#DF2020\", \"#DDDF21\"), TCGA.only = FALSE, Cancer = \"ACC\" ) #> Reading cache data /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() #> Warning in vis_toil_TvsN_cancer(Gene = \"TP53\", Mode = \"Violinplot\", #> Show.P.value = TRUE, : No data available #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"compare-gene-expression-level-in-different-anatomic-regions","dir":"Articles","previous_headings":"Data Visualization","what":"Compare Gene Expression Level in Different Anatomic Regions","title":"Examples of Accessible Functions","text":"function needs gganatogram package, CRAN. Please install using function. Click see output","code":"if (require(\"gganatogram\")) { vis_pancan_anatomy(Gene = \"TP53\", Gender = c(\"Female\", \"Male\"), option = \"D\") }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"visualize-relationship-between-gene-expression-and-prognosis-in-the-pancan-dataset","dir":"Articles","previous_headings":"Data Visualization","what":"Visualize Relationship between Gene Expression and Prognosis in the PANCAN Dataset","title":"Examples of Accessible Functions","text":"","code":"vis_unicox_tree( Gene = \"TP53\", measure = \"OS\", values = c(\"grey\", \"#E31A1C\", \"#377DB8\") ) #> Reading cache data /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/Rtmp6P8rKK/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() #> Warning in vis_unicox_tree(Gene = \"TP53\", measure = \"OS\", values = c(\"grey\", : #> No data available #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"other-functions-and-data","dir":"Articles","previous_headings":"Data Visualization","what":"Other Functions and Data","title":"Examples of Accessible Functions","text":"exported data functions organized .","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/authors.html","id":null,"dir":"","previous_headings":"","what":"Authors","title":"Authors and Citation","text":"Shixiang Wang. Author, maintainer. Shensuo Li. Author. Yi Xiong. Author. Longfei Zhao. Author. Kai Gu. Author. Yin Li. Author. Fei Zhao. Author.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/authors.html","id":"citation","dir":"","previous_headings":"","what":"Citation","title":"Authors and Citation","text":"Wang S, Li S, Xiong Y, Zhao L, Gu K, Li Y, Zhao F (2024). UCSCXenaShiny: Interactive Analysis UCSC Xena Data. R package version 2.2.0, https://openbiox.github.io/UCSCXenaShiny/, https://github.com/openbiox/UCSCXenaShiny.","code":"@Manual{, title = {UCSCXenaShiny: Interactive Analysis of UCSC Xena Data}, author = {Shixiang Wang and Shensuo Li and Yi Xiong and Longfei Zhao and Kai Gu and Yin Li and Fei Zhao}, year = {2024}, note = {R package version 2.2.0, https://openbiox.github.io/UCSCXenaShiny/}, url = {https://github.com/openbiox/UCSCXenaShiny}, }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"ucscxenashiny-","dir":"","previous_headings":"","what":"Interactive Analysis of UCSC Xena Data","title":"Interactive Analysis of UCSC Xena Data","text":"UCSCXenaShiny R package interactively exploring UCSC Xena. mainly designed provide web app (built top {shiny} framework {UCSCXenaTools} package) downloading, analyzing visualizing datasets UCSC Xena. Please cite following article used UCSCXenaShiny study: Shixiang Wang#, Yi Xiong#, Longfei Zhao#, Kai Gu#, Yin Li, Fei Zhao, Jianfeng Li, Mingjie Wang, Haitao Wang, Ziyu Tao, Tao Wu, Yichao Zheng, Xuejun Li, Xue-Song Liu, UCSCXenaShiny: R/CRAN Package Interactive Analysis UCSC Xena Data, Bioinformatics, 2021;, btab561, https://doi.org/10.1093/bioinformatics/btab561.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"cloud-use-on-cloud","dir":"","previous_headings":"","what":"☁️ Use on cloud","title":"Interactive Analysis of UCSC Xena Data","text":"don’t want install R packages locally, programming experience, try using tool Oncoharmony Network () Hiplot ORG platform (). deployed two additional apps: basic version V2 (https://shiny.zhoulab.ac.cn/UCSCXenaShiny_basic/) archive version V1 (https://shiny.zhoulab.ac.cn/UCSCXenaShinyV1/, code please see v1 branch).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"snake-use-with-conda","dir":"","previous_headings":"","what":"🐍 Use with Conda","title":"Interactive Analysis of UCSC Xena Data","text":"Install conda-forge channel : possible list versions r-ucscxenashiny available platform :","code":"conda install -c conda-forge r-ucscxenashiny conda search r-ucscxenashiny --channel conda-forge"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"package-use-with-docker","dir":"","previous_headings":"","what":"📦 Use with Docker","title":"Interactive Analysis of UCSC Xena Data","text":"UCSCXenaShiny corresponding docker image https://hub.docker.com/r/shixiangwang/ucscxenashiny/, can install latest version : v2, docker pull GitHub ghcr.io registry also supported, e.g., docker pull ghcr.io/openbiox/ucscxenashiny:master. versions can found https://hub.docker.com/r/shixiangwang/ucscxenashiny/tags/. use specified version (e.g., 2.0.0; latest code commit auto-build tag master), run following command install: Run latest stable docker image keep background : Now find Shiny open URL http://127.0.0.1:3838 web browser. deploy docker public (cloud) Linux server, change 127.0.0.1 host IP. first time, may return failure ‘take long time respond’, please refresh web page. application failed start. Check container installed dependencies. can interactively check container: can manage deployed container following commands:","code":"docker pull shixiangwang/ucscxenashiny docker pull shixiangwang/ucscxenashiny:2.0.0 # docker pull shixiangwang/ucscxenashiny:master # For latest code, unstable docker run -d --name xenashiny -p 3838:3838 shixiangwang/ucscxenashiny docker exec xenashiny R -e 'source(system.file(\"shinyapp/utils_pkgs.R\", package = \"UCSCXenaShiny\"))' docker exec -it xenashiny /bin/bash # Stop the container docker stop xenashiny # Start the container docker start xenashiny"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"arrow_double_down-manual-installation","dir":"","previous_headings":"","what":"⏬ Manual installation","title":"Interactive Analysis of UCSC Xena Data","text":"can install stable release UCSCXenaShiny CRAN : can install development version UCSCXenaShiny Github : r-universe: dependent R packages specific Shiny application automatically installed start app_run() command. failed install UCSCXenaShiny, please check following system dependencies properly installed see Troubleshooting section specific installation issues.","code":"install.packages(\"UCSCXenaShiny\") remotes::install_github(\"openbiox/UCSCXenaShiny\") install.packages(\"UCSCXenaShiny\", repos = c(\"https://openbiox.r-universe.dev\", \"https://cran.r-project.org\"))"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"system-dependencies-installation","dir":"","previous_headings":"⏬ Manual installation","what":"System dependencies installation","title":"Interactive Analysis of UCSC Xena Data","text":"use Windows/MacOS, please skip reading sub-section. Linux distributions diverse, test installation UCSCXenaShiny common used Ubuntu/CentOS. using Linux distributions, need solve system dependencies installation problems encounter R package installation errors. However, installation system dependencies Ubuntu/CentOS good references. Please note commands execuated root. Ubuntu: CentOS:","code":"apt update -y && apt install -y libcurl4-openssl-dev libssl-dev libxml2-dev \\ libgmp3-dev libmpfr-dev yum update -y && yum install -y libcurl-devel openssl-devel libxml2-devel \\ gmp-devel mpfr-devel libjpeg-devel cairo-devel"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"beginner-usage","dir":"","previous_headings":"","what":"🔰 Usage","title":"Interactive Analysis of UCSC Xena Data","text":"First load package: Start Shiny R console (ignore just want use functions package): want deploy UCSC Xena Shiny Shiny Server, please copy App.R www/ directory shinyapp. xena.runMode top App.R recommended set \"server\" instead \"client\" (default). advanced users, examples illustrating useful functions obtain analyze data described vignette. exported data functions organized . xena.cacheDir xena.zenodoDir two options control store data. e.g., Option xena.runMode can used control way Shiny works. can ‘client’ ‘server’. can directly set app_run().","code":"library(UCSCXenaShiny) app_run() # At default, the Shiny is running under client mode # It means the data queried from remote UCSC Xena server will # be saved to temporary directory determined by R # If you frequently use this tool or deploy this tool as a web service for multiple users # It is recommended to run it with 'server' mode # i.e., # # app_run(\"server\") xena.cacheDir = \"/xena\" xena.zenodoDir = \"/xena/datasets\" options(xena.cacheDir = xena.cacheDir, xena.zenodoDir = xena.zenodoDir) options(xena.runMode = \"server\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"movie_camera-videos","dir":"","previous_headings":"","what":"🎥 Videos","title":"Interactive Analysis of UCSC Xena Data","text":"Home page: https://www.bilibili.com/video/bv1R84y1F7WT. Repository page: https://www.bilibili.com/video/bv1Mq4y1J73o. General Analysis page: https://www.bilibili.com/video/bv1p64y1U7iU. Quick PanCan Analysis page: https://www.bilibili.com/video/bv1o64y1y7jW. Genomic Signature: https://www.bilibili.com/video/bv1zB4y1c7eB. Upload custom data general analysis: https://www.bilibili.com/video/BV1pf4y1j7eP. Please note upload files must format csv/tsv (gz compression supported) files must extension tsv/txt/csv/gz.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"hammer_and_wrench-troubleshooting","dir":"","previous_headings":"","what":"🛠️ Troubleshooting","title":"Interactive Analysis of UCSC Xena Data","text":"ERROR: dependencies ‘gmp’, ‘Rmpfr’ available package ‘PMCMRplus’ ERROR: dependency ‘pairwiseComparisons’ available package ‘ggstatsplot’. operating system lacks gmp Rmpfr development libraries. installation package ‘gridtext’ non-zero exit status error info grid-renderer.h:61:94: error: matching function call ‘Rcpp::Vector<10, Rcpp::PreserveStorage>::Vector(int, bool&, const GraphicsContext&)’. older C++ version support C++11 features. error seems happen CentOS. Install newer C++ set default compiler R fix problem. Append content openning file. installation package ‘nloptr’ non-zero exit status error info libtool: link: ERROR: information variable 'AR' cru. latest version nloptr can support R>=4.0. using R3.6 issue. install older version R console can fix . Reference: https://stackoverflow.com/questions/62900525/install-lme4--cran--ubuntu package ‘pacman’ available similar. Install hand R console. package called ‘shinythemes’ similar. Install hand R cosole. Install package gganatogram failed similar. Install hand R cosole. Install package ggradar failed similar. Install hand R cosole.","code":"# Ubuntu apt install -y libgmp3-dev libmpfr-dev # CentOS yum install -y gmp-devel mpfr-devel yum install centos-release-scl yum install devtoolset-9 # If you use your non-root account to install packages, # change /root to /home/your_id in the following command mkdir -p /root/.R vi /root/.R/Makevars CXX11=/opt/rh/devtoolset-9/root/usr/bin/g++ -std=c++11 packageurl <- \"https://cran.r-project.org/src/contrib/Archive/nloptr/nloptr_1.2.1.tar.gz\" install.packages(packageurl, repos=NULL, type=\"source\") install.packages(\"pacman\") install.packages(\"shinythemes\") if (!requireNamespace(\"gganatogram\")) { library(remotes) tryCatch( remotes::install_github(\"jespermaag/gganatogram\"), error = function(e) { remotes::install_git(\"https://gitee.com/XenaShiny/gganatogram\") } ) } if (!requireNamespace(\"ggradar\")) { library(remotes) tryCatch( remotes::install_github(\"ricardo-bion/ggradar\"), error = function(e) { remotes::install_git(\"https://gitee.com/XenaShiny/ggradar\") } ) }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"writing_hand-author","dir":"","previous_headings":"","what":"✍️ Author","title":"Interactive Analysis of UCSC Xena Data","text":"Shixiang Wang Yi Xiong Shensuo Li Longfei Zhao Kai Gu Yuzhong Peng Yin Li Fei Zhao","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"page_with_curl-license","dir":"","previous_headings":"","what":"📃 LICENSE","title":"Interactive Analysis of UCSC Xena Data","text":"GPLv3 © Openbiox","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/TCGA.organ.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: Organ Data — TCGA.organ","title":"TCGA: Organ Data — TCGA.organ","text":"TCGA: Organ Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/TCGA.organ.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: Organ Data — TCGA.organ","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/TCGA.organ.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: Organ Data — TCGA.organ","text":"","code":"data(\"TCGA.organ\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/UCSCXenaShiny-package.html","id":null,"dir":"Reference","previous_headings":"","what":"Xena Shiny App — UCSCXenaShiny-package","title":"Xena Shiny App — UCSCXenaShiny-package","text":"Shiny App UCSC Xena Data Hubs. See https://github.com/openbiox/UCSCXenaShiny details.","code":""},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/UCSCXenaShiny-package.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Xena Shiny App — UCSCXenaShiny-package","text":"Maintainer: Shixiang Wang w_shixiang@163.com (ORCID) Authors: Shensuo Li lishensuo@163.com Yi Xiong neuroxiong@openbiox.com (ORCID) Longfei Zhao longfei8533@126.com (ORCID) Kai Gu gukai1212@163.com (ORCID) Yin Li yinli18@fudan.edu.cn Fei Zhao zhaofei415@mails.ucas.edu.cn","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":null,"dir":"Reference","previous_headings":"","what":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"Analyze partial correlation gene-drug association controlling tissue average expression.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"","code":"analyze_gene_drug_response_asso(gene_list, combine = FALSE)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"gene_list gene symbol list. combine TRUE, combine expression gene list gene signature.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"data.frame combine TRUE, genes combined signature. mean.diff median.diff indicate mean median normalized expression difference High IC50 cells Low IC50 cells. cutoff High Low median IC50.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"","code":"if (FALSE) { # \\dontrun{ analyze_gene_drug_response_asso(\"TP53\") analyze_gene_drug_response_asso(c(\"TP53\", \"KRAS\")) analyze_gene_drug_response_asso(c(\"TP53\", \"KRAS\"), combine = TRUE) # Visualization vis_gene_drug_response_asso(\"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":null,"dir":"Reference","previous_headings":"","what":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"Analyze Difference Drug Response (IC50 Value (uM)) Gene (Signature) High Low Expression CCLE Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"","code":"analyze_gene_drug_response_diff( gene_list, drug = \"ALL\", tissue = \"ALL\", combine = FALSE, cutpoint = c(50, 50) )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"gene_list gene symbol list. drug drug name. Check examples. tissue tissue name. Check examples. combine TRUE, combine expression gene list gene signature. cutpoint cut point (percent) High Low group, default c(50, 50).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"data.frame.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"","code":"tissue_list <- c( \"prostate\", \"central_nervous_system\", \"urinary_tract\", \"haematopoietic_and_lymphoid_tissue\", \"kidney\", \"thyroid\", \"soft_tissue\", \"skin\", \"salivary_gland\", \"ovary\", \"lung\", \"bone\", \"endometrium\", \"pancreas\", \"breast\", \"large_intestine\", \"upper_aerodigestive_tract\", \"autonomic_ganglia\", \"stomach\", \"liver\", \"biliary_tract\", \"pleura\", \"oesophagus\" ) drug_list <- c( \"AEW541\", \"Nilotinib\", \"17-AAG\", \"PHA-665752\", \"Lapatinib\", \"Nutlin-3\", \"AZD0530\", \"PF2341066\", \"L-685458\", \"ZD-6474\", \"Panobinostat\", \"Sorafenib\", \"Irinotecan\", \"Topotecan\", \"LBW242\", \"PD-0325901\", \"PD-0332991\", \"Paclitaxel\", \"AZD6244\", \"PLX4720\", \"RAF265\", \"TAE684\", \"TKI258\", \"Erlotinib\" ) target_list <- c( \"IGF1R\", \"ABL\", \"HSP90\", \"c-MET\", \"EGFR\", \"MDM2\", \"GS\", \"HDAC\", \"RTK\", \"TOP1\", \"XIAP\", \"MEK\", \"CDK4\", \"TUBB1\", \"RAF\", \"ALK\", \"FGFR\" ) if (FALSE) { # \\dontrun{ analyze_gene_drug_response_diff(\"TP53\") analyze_gene_drug_response_diff(c(\"TP53\", \"KRAS\"), drug = \"AEW541\") analyze_gene_drug_response_diff(c(\"TP53\", \"KRAS\"), tissue = \"kidney\", combine = TRUE ) # Visualization vis_gene_drug_response_diff(\"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":null,"dir":"Reference","previous_headings":"","what":"Run UCSC Xena Shiny App — app_run","title":"Run UCSC Xena Shiny App — app_run","text":"Run UCSC Xena Shiny App","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run UCSC Xena Shiny App — app_run","text":"","code":"app_run(runMode = \"client\", port = getOption(\"shiny.port\"))"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run UCSC Xena Shiny App — app_run","text":"runMode default 'client' personal user, set 'server' running server. port TCP port application listen . port specified, shiny.port option set (options(shiny.port = XX)), port used. Otherwise, use random port 3000:8000, excluding ports blocked Google Chrome considered unsafe: 3659, 4045, 5060, 5061, 6000, 6566, 6665:6669 6697. twenty random ports tried.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Run UCSC Xena Shiny App — app_run","text":"","code":"if (FALSE) { # \\dontrun{ app_run() } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":null,"dir":"Reference","previous_headings":"","what":"Run UCSC Xena Shiny App with specifc content — app_run2","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"Run UCSC Xena Shiny App specifc content","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"","code":"app_run2( runMode = \"client\", port = getOption(\"shiny.port\"), content = c(\"a\", \"s\", \"q\", \"p\", \"d\") )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"runMode default 'client' personal user, set 'server' running server. port TCP port application listen . port specified, shiny.port option set (options(shiny.port = XX)), port used. Otherwise, use random port 3000:8000, excluding ports blocked Google Chrome considered unsafe: 3659, 4045, 5060, 5061, 6000, 6566, 6665:6669 6697. twenty random ports tried. content Modules enable. : modules s: loading basic modules; q: add tpc (TCGA, PCAWG, CCLE) modules p: add tpc pipelines d: add pharmcogenomics modules","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"","code":"if (FALSE) { # \\dontrun{ app_run2(content = \"s\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":null,"dir":"Reference","previous_headings":"","what":"Show Available Hosts — available_hosts","title":"Show Available Hosts — available_hosts","text":"Show Available Hosts","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Show Available Hosts — available_hosts","text":"","code":"available_hosts()"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Show Available Hosts — available_hosts","text":"hosts","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Show Available Hosts — available_hosts","text":"","code":"available_hosts() #> [1] \"publicHub\" \"tcgaHub\" \"gdcHub\" \"icgcHub\" #> [5] \"toilHub\" \"pancanAtlasHub\" \"treehouseHub\" \"pcawgHub\" #> [9] \"atacseqHub\" \"singlecellHub\" \"kidsfirstHub\""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/calc_pw_mut_cnv.html","id":null,"dir":"Reference","previous_headings":"","what":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","title":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","text":"Prepare Mut/CNV data pathways given specific samples","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/calc_pw_mut_cnv.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","text":"","code":"calc_pw_mut_cnv(tumor_samples = NULL)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/calc_pw_mut_cnv.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","text":"tumor_samples Select specific tumor samples. Default NULL, indicating tumor samples.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":null,"dir":"Reference","previous_headings":"","what":"ABSOLUTE Result of CCLE Database — ccle_absolute","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"ABSOLUTE Result CCLE Database","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"see \"data_source\" attribute.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"","code":"data(\"ccle_absolute\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":null,"dir":"Reference","previous_headings":"","what":"Phenotype Info of CCLE Database — ccle_info","title":"Phenotype Info of CCLE Database — ccle_info","text":"Phenotype Info CCLE Database","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Phenotype Info of CCLE Database — ccle_info","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Phenotype Info of CCLE Database — ccle_info","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Phenotype Info of CCLE Database — ccle_info","text":"","code":"data(\"ccle_info\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":null,"dir":"Reference","previous_headings":"","what":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"Cleaned Phenotype Info CCLE Database grouping","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"","code":"data(\"ccle_info_fine\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/dot-opt_pancan.html","id":null,"dir":"Reference","previous_headings":"","what":"A default setting for pan-cancer studies — .opt_pancan","title":"A default setting for pan-cancer studies — .opt_pancan","text":"default setting pan-cancer studies","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/dot-opt_pancan.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"A default setting for pan-cancer studies — .opt_pancan","text":"","code":".opt_pancan"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/dot-opt_pancan.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"A default setting for pan-cancer studies — .opt_pancan","text":"object class list length 16.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":null,"dir":"Reference","previous_headings":"","what":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"Run Correlation Two Variables Support Group Variable","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"","code":"ezcor( data = NULL, split = FALSE, split_var = NULL, var1 = NULL, var2 = NULL, cor_method = \"pearson\", adjust_method = \"none\", use = \"complete\", sig_label = TRUE, verbose = TRUE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"data data.frame containing variables split whether perform correlation grouped variable, default 'FALSE' split_var character, group variable var1 character, first variable correlation var2 character, second variable correlation cor_method method=\"pearson\" default value. alternatives passed cor \"spearman\" \"kendall\" adjust_method adjustment multiple tests used? (\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\") use use=\"pairwise\" pairwise deletion cases. use=\"complete\" select just complete cases sig_label whether add symbal significance. P < 0.001,***; P < 0.01,**; P < 0.05,*; P >=0.05,\"\" verbose TRUE, print extra info.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"Yi Xiong","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":null,"dir":"Reference","previous_headings":"","what":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"Run correlation two variables batch mode support group variable","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"","code":"ezcor_batch( data, var1, var2, split = FALSE, split_var = NULL, cor_method = \"pearson\", adjust_method = \"none\", use = \"complete\", sig_label = TRUE, parallel = FALSE, verbose = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"data data.frame containing variables var1 character, first variable correlation var2 character, second variable correlation split whether perform correlation grouped variable, default 'FALSE' split_var character, group variable cor_method method=\"pearson\" default value. alternatives passed cor \"spearman\" \"kendall\" adjust_method adjustment multiple tests used? (\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\") use use=\"pairwise\" pairwise deletion cases. use=\"complete\" select just complete cases sig_label whether add symbal significance. P < 0.001,***; P < 0.01,**; P < 0.05,*; P >=0.05,\"\" parallel TRUE, parallel computation furrr package. verbose TRUE, print extra info.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"Yi Xiong, Shixiang Wang","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Run partial correlation — ezcor_partial_cor","title":"Run partial correlation — ezcor_partial_cor","text":"Run partial correlation","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run partial correlation — ezcor_partial_cor","text":"","code":"ezcor_partial_cor( data = NULL, split = FALSE, split_var = NULL, var1 = NULL, var2 = NULL, var3 = NULL, cor_method = \"pearson\", sig_label = TRUE, ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run partial correlation — ezcor_partial_cor","text":"data data.frame containing variables split whether perform correlation grouped variable, default 'FALSE' split_var character, group variable var1 character, first variable correlation var2 character, second variable correlation var3 character character vector, third variable correlation cor_method method=\"pearson\" default value. alternatives passed cor \"spearman\" \"kendall\" sig_label whether add symbal significance. P < 0.001,\"\"; P < 0.01,\"\"; P < 0.05,\"\"; P >=0.05,\"\" ... arguments passed methods","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Run partial correlation — ezcor_partial_cor","text":"data.frame","code":""},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Run partial correlation — ezcor_partial_cor","text":"Yi Xiong","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"Identifier includes gene/probe etc.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"","code":"get_ccle_cn_value(identifier) get_ccle_gene_value(identifier, norm = c(\"rpkm\", \"nc\")) get_ccle_protein_value(identifier) get_ccle_mutation_status(identifier) get_pancan_value( identifier, subtype = NULL, dataset = NULL, host = available_hosts(), samples = NULL, ... ) get_pancan_gene_value(identifier, norm = c(\"tpm\", \"fpkm\", \"nc\")) get_pancan_transcript_value(identifier, norm = c(\"tpm\", \"fpkm\", \"isopct\")) get_pancan_protein_value(identifier) get_pancan_mutation_status(identifier) get_pancan_cn_value(identifier, gistic2 = TRUE, use_thresholded_data = FALSE) get_pancan_methylation_value( identifier, type = c(\"450K\", \"27K\"), rule_out = NULL, aggr = c(\"NA\", \"mean\", \"Q0\", \"Q25\", \"Q50\", \"Q75\", \"Q100\") ) get_pancan_miRNA_value(identifier) get_pcawg_gene_value(identifier) get_pcawg_fusion_value(identifier) get_pcawg_promoter_value(identifier, type = c(\"raw\", \"relative\", \"outlier\")) get_pcawg_miRNA_value(identifier, norm = c(\"TMM\", \"UQ\")) get_pcawg_APOBEC_mutagenesis_value( identifier = c(\"tCa_MutLoad_MinEstimate\", \"APOBECtCa_enrich\", \"A3A_or_A3B\", \"APOBEC_tCa_enrich_quartile\", \"APOBECrtCa_enrich\", \"APOBECytCa_enrich\", \"APOBECytCa_enrich-APOBECrtCa_enrich\", \"BH_Fisher_p-value_tCa\", \"ntca+tgan\", \"rtCa_to_G+rtCa_to_T\", \"rtca+tgay\", \"tCa_to_G+tCa_to_T\", \"ytCa_rtCa_BH_Fisher_p-value\", \"ytCa_rtCa_Fisher_p-value\", \"ytCa_to_G+ytCa_to_T\", \"ytca+tgar\") )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"identifier length-1 character representing gene symbol, ensembl gene id, probe id. Gene symbol highly recommended. norm normalization method. subtype length-1 chracter representing regular expression matching DataSubtype column UCSCXenaTools::XenaData. dataset length-1 chracter representing regular expression matching XenaDatasets UCSCXenaTools::XenaData. host character vector representing host name(s), e.g. \"toilHub\". samples character vector representing samples want returned. ... parameters. gistic2 TRUE (default), use GISTIC2 data. use_thresholded_data TRUE, use GISTIC2-thresholded value. type methylation type, one \"450K\" \"27K\". function get_pcawg_promoter_value, can one \"raw\", \"relative\", \"outlier\". rule_out methylation sites rule analyzing. aggr apporaches aggregate methylation data, default 'NA', case, mean value obtained gene-level methylation. Allowed value one c(\"NA\", \"mean\", \"Q0\", \"Q25\", \"Q50\", \"Q75\", \"Q100\"). , Q50 median.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"named vector list.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"functions","dir":"Reference","previous_headings":"","what":"Functions","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"get_ccle_cn_value(): Fetch copy number value CCLE dataset get_ccle_gene_value(): Fetch gene expression value CCLE dataset get_ccle_protein_value(): Fetch gene protein expression value CCLE dataset get_ccle_mutation_status(): Fetch gene mutation info CCLE dataset get_pancan_value(): Fetch identifier value pan-cancer dataset get_pancan_gene_value(): Fetch gene expression value pan-cancer dataset get_pancan_transcript_value(): Fetch gene transcript expression value pan-cancer dataset get_pancan_protein_value(): Fetch protein expression value pan-cancer dataset get_pancan_mutation_status(): Fetch mutation status value pan-cancer dataset get_pancan_cn_value(): Fetch gene copy number value pan-cancer dataset processed GISTIC 2.0 get_pancan_methylation_value(): Fetch gene expression value CCLE dataset get_pancan_miRNA_value(): Fetch miRNA expression value pan-cancer dataset get_pcawg_gene_value(): Fetch specimen-level gene expression value PCAWG cohort get_pcawg_fusion_value(): Fetch specimen-level gene fusion value PCAWG cohort get_pcawg_promoter_value(): Fetch specimen-level gene promoter activity value PCAWG cohort get_pcawg_miRNA_value(): Fetch specimen-level miRNA value PCAWG cohort get_pcawg_APOBEC_mutagenesis_value(): Fetch specimen-level gene fusion value PCAWG cohort","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"","code":"if (FALSE) { # \\dontrun{ # Fetch TP53 expression value from pan-cancer dataset t1 <- get_pancan_value(\"TP53\", dataset = \"TcgaTargetGtex_rsem_isoform_tpm\", host = \"toilHub\" ) t2 <- get_pancan_gene_value(\"TP53\") t3 <- get_pancan_protein_value(\"AKT\") t4 <- get_pancan_mutation_status(\"TP53\") t5 <- get_pancan_cn_value(\"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":null,"dir":"Reference","previous_headings":"","what":"Keep Only Columns Used for Sample Selection — keep_cat_cols","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"Keep Columns Used Sample Selection","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"","code":"keep_cat_cols(x, keep_sam_cols = TRUE, return_idx = TRUE)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"x data.frame many columns. keep_sam_cols TRUE (default), keep columns pattern 'sample', 'patient', etc. return_idx TRUE (default), return index 5 () columns, useful Shiny.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"data.frame list.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":null,"dir":"Reference","previous_headings":"","what":"Load Dataset Provided by This Package — load_data","title":"Load Dataset Provided by This Package — load_data","text":"Load data builtin Zenodo. Option xena.zenodoDir can used set default path storing extra data Zenodo, e.g., options(xena.zenodoDir = \"/home/xxx/dataset\").","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Load Dataset Provided by This Package — load_data","text":"","code":"load_data(name)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Load Dataset Provided by This Package — load_data","text":"name dataset name. one Builtin datasets: ccle_absolute: CCLE ABSOLUTE result. ccle_info: CCLE information. ccle_info_fine: cleaned CCLE information TPC analysis. pcawg_info: PCAWG information. pcawg_info_fine: cleaned PCAWG information TPC analysis. pcawg_purity: PCAWG tumor purity, ploidy WGD data. tcga_clinical: TCGA clinical data. tcga_clinical_fine: cleaned TCGA information TPC analysis. tcga_genome_instability: TCGA genome instability data. tcga_gtex: TCGA GTEX sample info. tcga_purity: TCGA tumor purity data. tcga_subtypes: TCGA subtypes data. tcga_surv: TCGA survival data. TCGA.organ: TCGA organ data. toil_info: Toil hub information. Remote datasets stored Zenodo: pcawg_promoter_id: PCAWG promoter identifiers. transcript_identifier: Common transcript identifiers. ccle_expr_and_drug_response: CCLE expression drug response data. ccle_drug_response_extend: CCLE drug response extended data. pancan_MSI: Pan-cancer MSI data. tcga_chr_alteration: TCGA chromosome alteration data. tcga_MSI: TCGA MSI data. tcga_pan_immune_signature: TCGA pan-cancer immune signature. tcga_stemness: TCGA tumor stemness data. tcga_TIL: TCGA TIL data. tcga_PW: ssGSEA scores HALLMARK, KEGG, IOBR terms TCGA samples. tcga_PW_meta: metadata annotation HALLMARK, KEGG, IOBR terms. tcga_tmb: TCGA TMB data. tcga_armcalls: TCGA arm alteration calls Aneuploidy data. tcga_dna_repair: TCGA DNA repair data. pancancer_conserved_immune_subtype: Pan-cancer conserved immune subtypes. pcawg_TIL: PCAWG TIL data. pcawg_PW: ssGSEA scores HALLMARK, KEGG, IOBR terms PCAWG samples. ...","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Load Dataset Provided by This Package — load_data","text":"dataset, typically data.frame.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Load Dataset Provided by This Package — load_data","text":"","code":"data1 <- load_data(\"tcga_surv\") data1 #> sample OS OS.time DSS DSS.time DFI DFI.time PFI PFI.time #> 1 TCGA-OR-A5J1-01 1 1355 1 1355 1 754 1 754 #> 2 TCGA-OR-A5J2-01 1 1677 1 1677 NA NA 1 289 #> 3 TCGA-OR-A5J3-01 0 2091 0 2091 1 53 1 53 #> 4 TCGA-OR-A5J5-01 1 365 1 365 NA NA 1 50 #> 5 TCGA-OR-A5J6-01 0 2703 0 2703 0 2703 0 2703 #> 6 TCGA-OR-A5J7-01 1 490 1 490 NA NA 1 162 #> 7 TCGA-OR-A5J8-01 1 579 1 579 1 530 1 530 #> 8 TCGA-OR-A5J9-01 0 1352 0 1352 1 414 1 414 #> 9 TCGA-OR-A5JA-01 1 922 1 922 NA NA 1 922 #> 10 TCGA-OR-A5JB-01 1 551 NA 551 NA NA 0 551 #> 11 TCGA-OR-A5JC-01 1 1750 NA 1750 NA NA 0 1750 #> 12 TCGA-OR-A5JD-01 0 3038 0 3038 0 3038 0 3038 #> 13 TCGA-OR-A5JE-01 1 2105 1 2105 NA NA 1 477 #> 14 TCGA-OR-A5JF-01 0 2015 0 2015 0 2015 0 2015 #> 15 TCGA-OR-A5JG-01 1 541 1 541 NA NA 1 541 #> 16 TCGA-OR-A5JI-01 0 2331 0 2331 0 2331 0 2331 #> 17 TCGA-OR-A5JJ-01 1 490 1 490 NA NA 1 490 #> 18 TCGA-OR-A5JK-01 0 1497 0 1497 NA NA 0 1497 #> 19 TCGA-OR-A5JL-01 0 2056 0 2056 0 2056 0 2056 #> 20 TCGA-OR-A5JM-01 1 562 1 562 NA NA 1 72 #> 21 TCGA-OR-A5JO-01 0 1194 0 1194 0 1194 0 1194 #> 22 TCGA-OR-A5JP-01 0 464 0 464 0 464 0 464 #> 23 TCGA-OR-A5JQ-01 0 1103 0 1103 0 1103 0 1103 #> 24 TCGA-OR-A5JR-01 0 3688 0 3688 0 3688 0 3688 #> 25 TCGA-OR-A5JS-01 0 383 0 383 NA NA 1 166 #> 26 TCGA-OR-A5JT-01 0 907 0 907 NA NA 0 907 #> 27 TCGA-OR-A5JV-01 0 2023 0 2023 0 2023 1 953 #> 28 TCGA-OR-A5JW-01 0 2202 0 2202 0 2202 0 2202 #> 29 TCGA-OR-A5JX-01 0 950 0 950 NA NA 0 950 #> 30 TCGA-OR-A5JY-01 1 552 1 552 NA NA 1 75 #> 31 TCGA-OR-A5JZ-01 0 822 0 822 NA NA 1 247 #> 32 TCGA-OR-A5K0-01 0 1029 0 1029 NA NA 1 659 #> 33 TCGA-OR-A5K1-01 0 3289 0 3289 1 826 1 826 #> 34 TCGA-OR-A5K3-01 0 3465 0 3465 0 3465 0 3465 #> 35 TCGA-OR-A5K4-01 0 1082 0 1082 0 1082 0 1082 #> 36 TCGA-OR-A5K5-01 1 498 1 498 NA NA 1 108 #> 37 TCGA-OR-A5K6-01 0 1493 0 1493 1 391 1 391 #> 38 TCGA-OR-A5K8-01 0 749 0 749 0 749 0 749 #> 39 TCGA-OR-A5K9-01 1 344 1 344 NA NA 1 236 #> 40 TCGA-OR-A5KO-01 0 1414 0 1414 NA NA 1 541 #> 41 TCGA-OR-A5KT-01 0 2895 0 2895 1 2099 1 2099 #> 42 TCGA-OR-A5KU-01 0 4673 0 4673 0 4673 0 4673 #> 43 TCGA-OR-A5KV-01 0 3878 0 3878 1 1116 1 1116 #> 44 TCGA-OR-A5KW-01 0 2076 0 2076 0 2076 0 2076 #> 45 TCGA-OR-A5KX-01 0 1364 0 1364 NA NA 1 62 #> 46 TCGA-OR-A5KY-01 1 391 1 391 NA NA 1 178 #> 47 TCGA-OR-A5KZ-01 1 125 1 125 NA NA 1 36 #> 48 TCGA-OR-A5L3-01 0 4628 0 4628 0 4628 0 4628 #> 49 TCGA-OR-A5L4-01 0 967 0 967 0 967 0 967 #> 50 TCGA-OR-A5L5-01 0 1317 0 1317 0 1317 0 1317 #> 51 TCGA-OR-A5L6-01 0 861 0 861 0 861 0 861 #> 52 TCGA-OR-A5L8-01 0 885 0 885 0 885 0 885 #> 53 TCGA-OR-A5L9-01 0 871 0 871 0 871 0 871 #> 54 TCGA-OR-A5LA-01 0 719 0 719 0 719 0 719 #> 55 TCGA-OR-A5LB-01 1 1204 1 1204 NA NA 1 611 #> 56 TCGA-OR-A5LC-01 1 159 1 159 NA NA 1 50 #> 57 TCGA-OR-A5LD-01 1 1197 1 1197 NA NA 1 444 #> 58 TCGA-OR-A5LE-01 1 662 1 662 NA NA 1 265 #> 59 TCGA-OR-A5LG-01 0 1589 0 1589 1 1393 1 1393 #> 60 TCGA-OR-A5LH-01 1 2385 1 2385 NA NA 1 2385 #> 61 TCGA-OR-A5LJ-01 1 1105 1 1105 NA NA 1 98 #> 62 TCGA-OR-A5LK-01 0 2740 0 2740 0 2740 0 2740 #> 63 TCGA-OR-A5LL-01 1 1613 1 1613 1 213 1 213 #> 64 TCGA-OR-A5LM-01 0 1858 0 1858 0 1858 0 1858 #> 65 TCGA-OR-A5LN-01 0 2342 0 2342 0 2342 0 2342 #> 66 TCGA-OR-A5LO-01 1 2405 1 2405 1 153 1 153 #> 67 TCGA-OR-A5LP-01 0 1857 0 1857 0 1857 0 1857 #> 68 TCGA-OR-A5LS-01 0 1096 0 1096 0 1096 0 1096 #> 69 TCGA-OR-A5LT-01 0 549 0 549 0 549 0 549 #> 70 TCGA-OU-A5PI-01 0 1171 0 1171 NA NA 1 351 #> 71 TCGA-P6-A5OF-01 1 207 1 207 NA NA 1 143 #> 72 TCGA-P6-A5OG-01 1 383 1 383 NA NA 1 11 #> 73 TCGA-PA-A5YG-01 0 756 0 756 0 756 0 756 #> 74 TCGA-PK-A5H8-01 0 3623 0 3623 0 3623 0 3623 #> 75 TCGA-PK-A5H9-01 0 616 0 616 0 616 0 616 #> 76 TCGA-PK-A5HA-01 0 1201 0 1201 0 1201 0 1201 #> 77 TCGA-PK-A5HB-01 0 1293 0 1293 NA NA 1 213 #> 78 TCGA-2F-A9KO-01 1 734 1 734 NA NA 1 651 #> 79 TCGA-2F-A9KP-01 1 364 1 364 NA NA 1 343 #> 80 TCGA-2F-A9KQ-01 0 2886 0 2886 0 2886 0 2886 #> 81 TCGA-2F-A9KR-01 1 3183 1 3183 1 3086 1 3086 #> 82 TCGA-2F-A9KT-01 0 3314 0 3314 0 3314 0 3314 #> 83 TCGA-2F-A9KW-01 1 254 1 254 NA NA 1 85 #> 84 TCGA-4Z-AA7M-01 0 495 0 495 0 495 0 495 #> 85 TCGA-4Z-AA7N-01 1 1367 0 1367 0 1367 0 1367 #> 86 TCGA-4Z-AA7O-01 0 512 0 512 0 512 0 512 #> 87 TCGA-4Z-AA7Q-01 1 510 0 510 NA NA 0 510 #> 88 TCGA-4Z-AA7R-01 1 522 1 522 NA NA 1 353 #> 89 TCGA-4Z-AA7S-01 1 1064 0 1064 NA NA 0 1064 #> 90 TCGA-4Z-AA7W-01 0 840 0 840 1 760 1 760 #> 91 TCGA-4Z-AA7Y-01 0 1522 0 1522 0 1522 0 1522 #> 92 TCGA-4Z-AA80-01 1 19 0 19 NA NA 0 19 #> 93 TCGA-4Z-AA81-01 1 1270 0 1270 0 1270 0 1270 #> 94 TCGA-4Z-AA82-01 1 1556 1 1556 NA NA 1 1150 #> 95 TCGA-4Z-AA83-01 0 2024 0 2024 0 2024 0 2024 #> 96 TCGA-4Z-AA84-01 0 460 0 460 NA NA 0 460 #> 97 TCGA-4Z-AA86-01 1 311 1 311 NA NA 1 136 #> 98 TCGA-4Z-AA87-01 0 1454 0 1454 NA NA 1 221 #> 99 TCGA-4Z-AA89-01 0 1029 0 1029 NA NA 1 648 #> 100 TCGA-5N-A9KI-01 1 76 0 76 0 76 0 76 #> 101 TCGA-5N-A9KM-01 1 530 1 530 1 276 1 276 #> 102 TCGA-BL-A0C8-01 0 1219 0 1219 1 630 1 630 #> 103 TCGA-BL-A13I-01 1 223 1 223 NA NA 1 216 #> 104 TCGA-BL-A13J-01 1 81 1 81 NA NA 1 81 #> 105 TCGA-BL-A13J-11 1 81 1 81 NA NA 1 81 #> 106 TCGA-BL-A3JM-01 1 205 1 205 NA NA 1 111 #> 107 TCGA-BL-A5ZZ-01 0 377 0 377 1 242 1 242 #> 108 TCGA-BT-A0S7-01 1 200 1 200 NA NA 1 200 #> 109 TCGA-BT-A0YX-01 1 400 1 400 NA NA 1 326 #> 110 TCGA-BT-A20J-01 1 579 1 579 NA NA 1 254 #> 111 TCGA-BT-A20N-01 1 795 1 795 NA NA 1 795 #> 112 TCGA-BT-A20N-11 1 795 1 795 NA NA 1 795 #> 113 TCGA-BT-A20O-01 1 370 1 370 NA NA 1 315 #> 114 TCGA-BT-A20P-01 1 544 NA 544 NA NA 0 544 #> 115 TCGA-BT-A20Q-01 1 593 1 593 NA NA 1 593 #> 116 TCGA-BT-A20Q-11 1 593 1 593 NA NA 1 593 #> 117 TCGA-BT-A20R-01 1 154 NA 154 NA NA 0 154 #> 118 TCGA-BT-A20R-11 1 154 NA 154 NA NA 0 154 #> 119 TCGA-BT-A20T-01 1 453 1 453 NA NA 1 314 #> 120 TCGA-BT-A20U-01 1 455 0 455 0 455 0 455 #> 121 TCGA-BT-A20U-11 1 455 0 455 0 455 0 455 #> 122 TCGA-BT-A20V-01 1 154 NA 154 NA NA 0 154 #> 123 TCGA-BT-A20W-01 1 254 0 254 0 254 0 254 #> 124 TCGA-BT-A20W-11 1 254 0 254 0 254 0 254 #> 125 TCGA-BT-A20X-01 1 251 1 251 NA NA 1 251 #> 126 TCGA-BT-A2LA-01 0 522 0 522 0 522 0 522 #> 127 TCGA-BT-A2LA-11 0 522 0 522 0 522 0 522 #> 128 TCGA-BT-A2LB-01 1 492 0 492 0 492 0 492 #> 129 TCGA-BT-A2LB-11 1 492 0 492 0 492 0 492 #> 130 TCGA-BT-A2LD-01 1 623 1 623 NA NA 1 555 #> 131 TCGA-BT-A3PH-01 1 142 1 142 NA NA 1 142 #> 132 TCGA-BT-A3PJ-01 0 789 0 789 0 789 0 789 #> 133 TCGA-BT-A3PK-01 1 303 1 303 NA NA 1 303 #> 134 TCGA-BT-A42C-01 0 873 0 873 0 873 0 873 #> 135 TCGA-BT-A42E-01 0 1108 0 1108 0 1108 0 1108 #> 136 TCGA-BT-A42F-01 0 864 0 864 NA NA 0 864 #> 137 TCGA-C4-A0EZ-01 1 273 1 273 NA NA 1 273 #> 138 TCGA-C4-A0F0-01 0 59 0 59 NA NA 0 59 #> 139 TCGA-C4-A0F1-01 0 89 0 89 NA NA 0 89 #> 140 TCGA-C4-A0F6-01 0 700 0 700 NA NA 0 700 #> 141 TCGA-C4-A0F7-01 1 62 1 62 NA NA 1 62 #> 142 TCGA-CF-A1HR-01 0 389 0 389 1 294 1 294 #> 143 TCGA-CF-A1HS-01 0 382 0 382 1 133 1 133 #> 144 TCGA-CF-A27C-01 0 425 0 425 0 425 0 425 #> 145 TCGA-CF-A3MF-01 0 383 0 383 0 383 0 383 #> 146 TCGA-CF-A3MG-01 0 369 0 369 0 369 0 369 #> 147 TCGA-CF-A3MH-01 0 398 0 398 0 398 0 398 #> 148 TCGA-CF-A3MI-01 0 370 0 370 0 370 0 370 #> 149 TCGA-CF-A47S-01 0 333 0 333 0 333 0 333 #> 150 TCGA-CF-A47T-01 1 385 1 385 1 139 1 139 #> 151 TCGA-CF-A47V-01 0 379 0 379 0 379 0 379 #> 152 TCGA-CF-A47W-01 0 368 0 368 0 368 0 368 #> 153 TCGA-CF-A47X-01 0 384 0 384 0 384 0 384 #> 154 TCGA-CF-A47Y-01 0 373 0 373 0 373 0 373 #> 155 TCGA-CF-A5U8-01 0 399 0 399 0 399 0 399 #> 156 TCGA-CF-A5UA-01 0 365 0 365 0 365 0 365 #> 157 TCGA-CF-A7I0-01 0 368 0 368 0 368 0 368 #> 158 TCGA-CF-A8HX-01 0 345 0 345 0 345 0 345 #> 159 TCGA-CF-A8HY-01 0 345 0 345 0 345 0 345 #> 160 TCGA-CF-A9FF-01 0 361 0 361 0 361 0 361 #> 161 TCGA-CF-A9FH-01 0 0 0 0 0 0 0 0 #> 162 TCGA-CF-A9FL-01 1 565 1 565 1 322 1 322 #> 163 TCGA-CF-A9FM-01 0 398 0 398 0 398 0 398 #> 164 TCGA-CU-A0YN-01 1 393 NA 393 NA NA 0 393 #> 165 TCGA-CU-A0YN-11 1 393 NA 393 NA NA 0 393 #> 166 TCGA-CU-A0YO-01 1 149 1 149 NA NA 1 118 #> 167 TCGA-CU-A0YR-01 1 460 1 460 NA NA 1 219 #> 168 TCGA-CU-A0YR-11 1 460 1 460 NA NA 1 219 #> 169 TCGA-CU-A3KJ-01 0 562 0 562 NA NA 1 166 #> 170 TCGA-CU-A3QU-01 0 158 0 158 NA NA 0 158 #> 171 TCGA-CU-A3YL-01 0 906 0 906 1 370 1 370 #> 172 TCGA-CU-A5W6-01 1 56 0 56 0 56 0 56 #> 173 TCGA-CU-A72E-01 1 413 1 413 NA NA 1 256 #> 174 TCGA-DK-A1A3-01 1 665 1 665 NA NA 1 665 #> 175 TCGA-DK-A1A5-01 1 65 0 65 0 65 0 65 #> 176 TCGA-DK-A1A6-01 0 2020 0 2020 NA NA 0 2020 #> 177 TCGA-DK-A1A7-01 0 560 0 560 NA NA 1 112 #> 178 TCGA-DK-A1AA-01 0 578 0 578 0 578 0 578 #> 179 TCGA-DK-A1AB-01 1 508 NA 508 NA NA 1 364 #> 180 TCGA-DK-A1AC-01 0 3981 0 3981 0 3981 0 3981 #> 181 TCGA-DK-A1AD-01 0 3420 0 3420 NA NA 0 3420 #> 182 TCGA-DK-A1AE-01 0 491 0 491 NA NA 1 211 #> 183 TCGA-DK-A1AF-01 0 536 0 536 NA NA 1 283 #> 184 TCGA-DK-A1AG-01 0 475 0 475 0 475 0 475 #> 185 TCGA-DK-A2HX-01 1 1420 0 1420 NA NA 0 1420 #> 186 TCGA-DK-A2I1-01 0 546 0 546 0 546 0 546 #> 187 TCGA-DK-A2I2-01 1 237 1 237 NA NA 1 163 #> 188 TCGA-DK-A2I4-01 0 4343 0 4343 0 4343 0 4343 #> 189 TCGA-DK-A2I6-01 0 2656 0 2656 NA NA 0 2656 #> 190 TCGA-DK-A3IK-01 1 146 0 146 NA NA 0 146 #> 191 TCGA-DK-A3IL-01 1 413 0 413 NA NA 0 413 #> 192 TCGA-DK-A3IM-01 1 248 1 248 1 201 1 201 #> 193 TCGA-DK-A3IN-01 1 250 0 250 0 250 0 250 #> 194 TCGA-DK-A3IQ-01 1 539 1 539 1 250 1 250 #> 195 TCGA-DK-A3IS-01 0 1529 0 1529 0 1529 0 1529 #> 196 TCGA-DK-A3IT-01 0 648 0 648 0 648 0 648 #> 197 TCGA-DK-A3IU-01 1 706 1 706 1 462 1 462 #> 198 TCGA-DK-A3IV-01 1 294 1 294 NA NA 1 212 #> 199 TCGA-DK-A3WW-01 0 633 0 633 0 633 0 633 #> 200 TCGA-DK-A3WX-01 1 321 1 321 NA NA 1 167 #> 201 TCGA-DK-A3WY-01 0 4967 0 4967 0 4967 0 4967 #> 202 TCGA-DK-A3X1-01 0 2009 0 2009 0 2009 0 2009 #> 203 TCGA-DK-A3X2-01 1 547 1 547 NA NA 1 533 #> 204 TCGA-DK-A6AV-01 0 1952 0 1952 0 1952 0 1952 #> 205 TCGA-DK-A6AW-01 0 1621 0 1621 0 1621 0 1621 #> 206 TCGA-DK-A6B0-01 0 2330 0 2330 0 2330 0 2330 #> 207 TCGA-DK-A6B1-01 0 2049 0 2049 0 2049 0 2049 #> 208 TCGA-DK-A6B2-01 0 477 0 477 NA NA 1 268 #> 209 TCGA-DK-A6B5-01 0 1542 0 1542 NA NA 0 1542 #> 210 TCGA-DK-A6B6-01 0 1115 0 1115 0 1115 0 1115 #> 211 TCGA-DK-AA6L-01 1 1163 1 1163 NA NA 1 920 #> 212 TCGA-DK-AA6M-01 0 1582 0 1582 NA NA 0 1582 #> 213 TCGA-DK-AA6P-01 0 457 0 457 NA NA 1 16 #> 214 TCGA-DK-AA6Q-01 1 413 1 413 NA NA 1 285 #> 215 TCGA-DK-AA6R-01 0 5041 0 5041 NA NA 1 4907 #> 216 TCGA-DK-AA6S-01 0 5050 0 5050 1 539 1 539 #> 217 TCGA-DK-AA6T-01 0 572 0 572 0 572 0 572 #> 218 TCGA-DK-AA6U-01 0 578 0 578 0 578 0 578 #> 219 TCGA-DK-AA6W-01 1 415 1 415 NA NA 1 379 #> 220 TCGA-DK-AA6X-01 0 467 0 467 NA NA 0 467 #> 221 TCGA-DK-AA71-01 0 415 0 415 NA NA 0 415 #> 222 TCGA-DK-AA74-01 0 1708 0 1708 0 1708 0 1708 #> 223 TCGA-DK-AA75-01 1 340 1 340 NA NA 1 328 #> 224 TCGA-DK-AA76-01 0 366 0 366 0 366 0 366 #> 225 TCGA-DK-AA77-01 0 618 0 618 NA NA 1 467 #> 226 TCGA-E5-A2PC-01 0 1326 0 1326 NA NA 0 1326 #> 227 TCGA-E5-A4TZ-01 1 467 1 467 NA NA 1 435 #> 228 TCGA-E5-A4U1-01 0 1181 0 1181 1 705 1 705 #> 229 TCGA-E7-A3X6-01 1 904 1 904 1 369 1 369 #> 230 TCGA-E7-A3Y1-01 0 163 0 163 0 163 0 163 #> 231 TCGA-E7-A4IJ-01 1 674 1 674 1 620 1 620 #> 232 TCGA-E7-A4XJ-01 1 68 0 68 0 68 0 68 #> 233 TCGA-E7-A519-01 0 508 0 508 0 508 0 508 #> 234 TCGA-E7-A541-01 1 778 0 778 0 778 0 778 #> 235 TCGA-E7-A5KE-01 0 17 0 17 NA NA 0 17 #> 236 TCGA-E7-A5KF-01 0 20 0 20 NA NA 0 20 #> 237 TCGA-E7-A677-01 0 820 0 820 0 820 0 820 #> 238 TCGA-E7-A678-01 0 798 0 798 0 798 0 798 #> 239 TCGA-E7-A6MD-01 0 129 0 129 NA NA 0 129 #> 240 TCGA-E7-A6ME-01 0 731 0 731 0 731 0 731 #> 241 TCGA-E7-A6MF-01 0 750 0 750 0 750 0 750 #> 242 TCGA-E7-A7DU-01 0 28 0 28 0 28 0 28 #> 243 TCGA-E7-A7DV-01 0 37 0 37 NA NA 0 37 #> 244 TCGA-E7-A7PW-01 0 416 0 416 1 174 1 174 #> 245 TCGA-E7-A7XN-01 0 428 0 428 NA NA 1 190 #> 246 TCGA-E7-A85H-01 0 394 0 394 0 394 0 394 #> 247 TCGA-E7-A8O7-01 0 466 0 466 0 466 0 466 #> 248 TCGA-E7-A8O8-01 0 13 0 13 0 13 0 13 #> 249 TCGA-E7-A97P-01 1 437 0 437 0 437 0 437 #> 250 TCGA-E7-A97Q-01 1 246 1 246 NA NA 1 246 #> 251 TCGA-FD-A3B3-01 1 974 0 974 0 974 0 974 #> 252 TCGA-FD-A3B4-01 1 510 1 510 1 359 1 359 #> 253 TCGA-FD-A3B5-01 1 272 1 272 NA NA 1 272 #> 254 TCGA-FD-A3B6-01 1 1005 0 1005 0 1005 0 1005 #> 255 TCGA-FD-A3B7-01 1 122 1 122 NA NA 1 110 #> 256 TCGA-FD-A3B8-01 0 384 0 384 0 384 0 384 #> 257 TCGA-FD-A3N5-01 1 685 1 685 NA NA 1 346 #> 258 TCGA-FD-A3N6-01 0 851 0 851 0 851 0 851 #> 259 TCGA-FD-A3NA-01 0 1845 0 1845 0 1845 1 1338 #> 260 TCGA-FD-A3SJ-01 1 739 1 739 NA NA 1 281 #> 261 TCGA-FD-A3SL-01 1 712 1 712 NA NA 1 260 #> 262 TCGA-FD-A3SM-01 1 547 1 547 NA NA 1 144 #> 263 TCGA-FD-A3SN-01 0 887 0 887 NA NA 1 110 #> 264 TCGA-FD-A3SO-01 1 168 1 168 NA NA 1 143 #> 265 TCGA-FD-A3SP-01 0 783 0 783 0 783 0 783 #> 266 TCGA-FD-A3SQ-01 1 1423 1 1423 NA NA 1 991 #> 267 TCGA-FD-A3SR-01 1 602 1 602 NA NA 1 372 #> 268 TCGA-FD-A3SS-01 1 391 1 391 NA NA 1 220 #> 269 TCGA-FD-A43N-01 0 699 0 699 NA NA 0 699 #> 270 TCGA-FD-A43P-01 0 832 0 832 0 832 0 832 #> 271 TCGA-FD-A43S-01 0 455 0 455 0 455 0 455 #> 272 TCGA-FD-A43U-01 0 636 0 636 NA NA 1 497 #> 273 TCGA-FD-A43X-01 0 110 0 110 0 110 0 110 #> 274 TCGA-FD-A43Y-01 1 474 0 474 0 474 0 474 #> 275 TCGA-FD-A5BR-01 0 813 0 813 0 813 0 813 #> 276 TCGA-FD-A5BS-01 0 1639 0 1639 0 1639 0 1639 #> 277 TCGA-FD-A5BT-01 1 328 0 328 NA NA 0 328 #> 278 TCGA-FD-A5BU-01 0 588 0 588 0 588 0 588 #> 279 TCGA-FD-A5BV-01 1 163 1 163 NA NA 1 134 #> 280 TCGA-FD-A5BX-01 1 173 1 173 NA NA 1 99 #> 281 TCGA-FD-A5BY-01 0 251 0 251 0 251 0 251 #> 282 TCGA-FD-A5BZ-01 1 835 1 835 NA NA 1 533 #> 283 TCGA-FD-A5C0-01 1 550 1 550 NA NA 1 27 #> 284 TCGA-FD-A5C1-01 0 1792 0 1792 0 1792 0 1792 #> 285 TCGA-FD-A62N-01 0 82 0 82 0 82 0 82 #> 286 TCGA-FD-A62O-01 1 216 0 216 NA NA 0 216 #> 287 TCGA-FD-A62P-01 1 191 1 191 NA NA 1 191 #> 288 TCGA-FD-A62S-01 1 406 1 406 NA NA 1 306 #> 289 TCGA-FD-A6TA-01 0 1912 0 1912 NA NA 0 1912 #> 290 TCGA-FD-A6TB-01 0 572 0 572 0 572 0 572 #> 291 TCGA-FD-A6TC-01 0 187 0 187 0 187 0 187 #> 292 TCGA-FD-A6TD-01 1 386 0 386 0 386 0 386 #> 293 TCGA-FD-A6TE-01 0 376 0 376 NA NA 1 321 #> 294 TCGA-FD-A6TF-01 1 69 0 69 NA NA 0 69 #> 295 TCGA-FD-A6TG-01 1 93 0 93 NA NA 0 93 #> 296 TCGA-FD-A6TH-01 1 131 1 131 NA NA 1 126 #> 297 TCGA-FD-A6TI-01 1 294 0 294 NA NA 0 294 #> 298 TCGA-FD-A6TK-01 0 330 0 330 0 330 0 330 #> 299 TCGA-FJ-A3Z7-01 0 945 0 945 NA NA 0 945 #> 300 TCGA-FJ-A3Z9-01 1 385 0 385 0 385 0 385 #> 301 TCGA-FJ-A3ZE-01 1 324 1 324 NA NA 1 152 #> 302 TCGA-FJ-A3ZF-01 0 524 0 524 0 524 0 524 #> 303 TCGA-FJ-A871-01 1 272 1 272 NA NA 1 106 #> 304 TCGA-FT-A3EE-01 1 99 0 99 NA NA 0 99 #> 305 TCGA-FT-A61P-01 0 337 0 337 NA NA 0 337 #> 306 TCGA-G2-A2EC-01 1 696 1 696 NA NA 1 679 #> 307 TCGA-G2-A2EF-01 0 1884 0 1884 NA NA 0 1884 #> 308 TCGA-G2-A2EJ-01 0 1460 0 1460 1 910 1 910 #> 309 TCGA-G2-A2EK-01 0 485 0 485 NA NA 1 485 #> 310 TCGA-G2-A2EL-01 1 819 1 819 NA NA 1 105 #> 311 TCGA-G2-A2EO-01 1 1804 0 1804 0 1804 0 1804 #> 312 TCGA-G2-A2ES-01 1 1004 1 1004 NA NA 1 897 #> 313 TCGA-G2-A3IB-01 1 220 1 220 NA NA 1 220 #> 314 TCGA-G2-A3IE-01 1 612 1 612 NA NA 1 612 #> 315 TCGA-G2-A3VY-01 0 536 0 536 NA NA 0 536 #> 316 TCGA-G2-AA3B-01 0 2008 0 2008 0 2008 0 2008 #> 317 TCGA-G2-AA3C-01 1 211 1 211 NA NA 1 211 #> 318 TCGA-G2-AA3D-01 0 2139 0 2139 NA NA 0 2139 #> 319 TCGA-G2-AA3F-01 0 893 0 893 NA NA 0 893 #> 320 TCGA-GC-A3BM-01 1 651 1 651 NA NA 1 651 #> 321 TCGA-GC-A3BM-11 1 651 1 651 NA NA 1 651 #> 322 TCGA-GC-A3I6-01 1 630 1 630 NA NA 1 546 #> 323 TCGA-GC-A3OO-01 0 481 0 481 0 481 0 481 #> 324 TCGA-GC-A3RB-01 0 582 0 582 0 582 0 582 #> 325 TCGA-GC-A3RC-01 0 484 0 484 0 484 0 484 #> 326 TCGA-GC-A3RD-01 0 428 0 428 0 428 0 428 #> 327 TCGA-GC-A3WC-01 0 540 0 540 0 540 0 540 #> 328 TCGA-GC-A3WC-11 0 540 0 540 0 540 0 540 #> 329 TCGA-GC-A3YS-01 0 758 0 758 NA NA 0 758 #> 330 TCGA-GC-A4ZW-01 0 15 0 15 NA NA 0 15 #> 331 TCGA-GC-A6I1-01 1 272 0 272 0 272 0 272 #> 332 TCGA-GC-A6I3-01 0 423 0 423 NA NA 0 423 #> 333 TCGA-GC-A6I3-11 0 423 0 423 NA NA 0 423 #> 334 TCGA-GD-A2C5-01 0 812 0 812 NA NA 1 214 #> 335 TCGA-GD-A2C5-11 0 812 0 812 NA NA 1 214 #> 336 TCGA-GD-A3OP-01 0 64 0 64 NA NA 0 64 #> 337 TCGA-GD-A3OP-11 0 64 0 64 NA NA 0 64 #> 338 TCGA-GD-A3OQ-01 0 95 0 95 NA NA 0 95 #> 339 TCGA-GD-A3OQ-11 0 95 0 95 NA NA 0 95 #> 340 TCGA-GD-A3OS-01 0 638 0 638 NA NA 1 223 #> 341 TCGA-GD-A6C6-01 0 67 0 67 0 67 0 67 #> 342 TCGA-GD-A76B-01 0 224 0 224 0 224 0 224 #> 343 TCGA-GU-A42P-01 1 332 0 332 NA NA 0 332 #> 344 TCGA-GU-A42Q-01 1 344 0 344 0 344 0 344 #> 345 TCGA-GU-A42R-01 1 577 1 577 NA NA 1 91 #> 346 TCGA-GU-A762-01 1 232 1 232 NA NA 1 232 #> 347 TCGA-GU-A763-01 0 997 0 997 NA NA 1 303 #> 348 TCGA-GU-A764-01 0 610 0 610 0 610 0 610 #> 349 TCGA-GU-A766-01 0 480 0 480 NA NA 0 480 #> 350 TCGA-GU-A767-01 1 144 1 144 NA NA 1 144 #> 351 TCGA-GU-AATO-01 1 324 1 324 NA NA 1 324 #> 352 TCGA-GU-AATP-01 0 1003 0 1003 NA NA 1 596 #> 353 TCGA-GU-AATQ-01 1 213 1 213 NA NA 1 213 #> 354 TCGA-GV-A3JV-01 1 434 1 434 NA NA 1 134 #> 355 TCGA-GV-A3JW-01 0 649 0 649 NA NA 1 271 #> 356 TCGA-GV-A3JX-01 0 581 0 581 0 581 0 581 #> 357 TCGA-GV-A3JZ-01 0 603 0 603 NA NA 0 603 #> 358 TCGA-GV-A3QF-01 1 617 0 617 NA NA 0 617 #> 359 TCGA-GV-A3QG-01 1 NA 1 NA NA NA 1 84 #> 360 TCGA-GV-A3QH-01 1 258 0 258 NA NA 1 125 #> 361 TCGA-GV-A3QI-01 0 1110 0 1110 1 768 1 768 #> 362 TCGA-GV-A3QK-01 0 832 0 832 NA NA 0 832 #> 363 TCGA-GV-A40E-01 1 261 1 261 NA NA 1 219 #> 364 TCGA-GV-A40G-01 0 580 0 580 0 580 0 580 #> 365 TCGA-GV-A6ZA-01 0 691 0 691 0 691 0 691 #> 366 TCGA-H4-A2HO-01 0 46 0 46 0 46 0 46 #> 367 TCGA-H4-A2HQ-01 0 590 0 590 NA NA 1 318 #> 368 TCGA-HQ-A2OE-01 0 1174 0 1174 NA NA 0 1174 #> 369 TCGA-HQ-A2OF-01 0 1947 0 1947 1 907 1 907 #> 370 TCGA-HQ-A5ND-01 1 274 1 274 NA NA 1 84 #> 371 TCGA-HQ-A5NE-01 1 370 1 370 1 211 1 211 #> 372 TCGA-K4-A3WS-01 0 761 0 761 0 761 0 761 #> 373 TCGA-K4-A3WU-01 0 105 0 105 NA NA 0 105 #> 374 TCGA-K4-A3WV-01 0 646 0 646 NA NA 0 646 #> 375 TCGA-K4-A3WV-11 0 646 0 646 NA NA 0 646 #> 376 TCGA-K4-A4AB-01 0 84 0 84 NA NA 0 84 #> 377 TCGA-K4-A4AC-01 1 278 1 278 NA NA 1 170 #> 378 TCGA-K4-A54R-01 0 842 0 842 0 842 0 842 #> 379 TCGA-K4-A54R-11 0 842 0 842 0 842 0 842 #> 380 TCGA-K4-A5RH-01 0 276 0 276 NA NA 1 196 #> 381 TCGA-K4-A5RI-01 1 356 1 356 NA NA 1 236 #> 382 TCGA-K4-A5RI-11 1 356 1 356 NA NA 1 236 #> 383 TCGA-K4-A5RJ-01 0 539 0 539 0 539 0 539 #> 384 TCGA-K4-A6FZ-01 0 55 0 55 0 55 0 55 #> 385 TCGA-K4-A6MB-01 0 469 0 469 NA NA 0 469 #> 386 TCGA-K4-A83P-01 0 495 0 495 NA NA 1 70 #> 387 TCGA-K4-AAQO-01 0 359 0 359 NA NA 0 359 #> 388 TCGA-KQ-A41N-01 0 1604 0 1604 0 1604 0 1604 #> 389 TCGA-KQ-A41O-01 0 1538 0 1538 NA NA 0 1538 #> 390 TCGA-KQ-A41P-01 0 1094 0 1094 NA NA 1 178 #> 391 TCGA-KQ-A41Q-01 0 1429 0 1429 NA NA 1 1314 #> 392 TCGA-KQ-A41R-01 0 1350 0 1350 0 1350 0 1350 #> 393 TCGA-KQ-A41S-01 0 35 0 35 0 35 0 35 #> 394 TCGA-LC-A66R-01 0 466 0 466 NA NA 0 466 #> 395 TCGA-LT-A5Z6-01 0 474 0 474 0 474 0 474 #> 396 TCGA-LT-A8JT-01 0 641 0 641 0 641 0 641 #> 397 TCGA-MV-A51V-01 0 410 0 410 0 410 0 410 #> 398 TCGA-PQ-A6FI-01 0 372 0 372 0 372 0 372 #> 399 TCGA-PQ-A6FN-01 0 507 0 507 NA NA 0 507 #> 400 TCGA-R3-A69X-01 0 433 0 433 0 433 0 433 #> 401 TCGA-S5-A6DX-01 1 56 1 56 NA NA 1 56 #> 402 TCGA-S5-AA26-01 0 503 0 503 0 503 0 503 #> 403 TCGA-SY-A9G0-01 1 1008 0 1008 NA NA 0 1008 #> 404 TCGA-SY-A9G5-01 0 1186 0 1186 0 1186 0 1186 #> 405 TCGA-UY-A78K-01 1 536 NA 536 NA NA 0 536 #> 406 TCGA-UY-A78L-01 0 1127 0 1127 NA NA 1 355 #> 407 TCGA-UY-A78M-01 1 690 1 690 NA NA 1 690 #> 408 TCGA-UY-A78N-01 1 2641 1 2641 NA NA 1 2472 #> 409 TCGA-UY-A78O-01 0 2312 0 2312 0 2312 0 2312 #> 410 TCGA-UY-A78P-01 0 2380 0 2380 0 2380 0 2380 #> 411 TCGA-UY-A8OB-01 0 2109 0 2109 NA NA 0 2109 #> 412 TCGA-UY-A8OC-01 1 92 1 92 NA NA 1 32 #> 413 TCGA-UY-A8OD-01 0 3432 0 3432 0 3432 0 3432 #> 414 TCGA-UY-A9PA-01 0 1072 0 1072 0 1072 0 1072 #> 415 TCGA-UY-A9PB-01 0 899 0 899 0 899 0 899 #> 416 TCGA-UY-A9PD-01 0 542 0 542 0 542 0 542 #> 417 TCGA-UY-A9PE-01 0 189 0 189 NA NA 1 473 #> 418 TCGA-UY-A9PF-01 0 117 0 117 NA NA 0 117 #> 419 TCGA-UY-A9PH-01 0 1561 0 1561 0 1561 0 1561 #> 420 TCGA-XF-A8HB-01 0 1370 0 1370 0 1370 0 1370 #> 421 TCGA-XF-A8HC-01 1 200 NA 200 NA NA 0 200 #> 422 TCGA-XF-A8HD-01 0 2964 0 2964 0 2964 0 2964 #> 423 TCGA-XF-A8HE-01 0 3817 0 3817 0 3817 0 3817 #> 424 TCGA-XF-A8HF-01 1 2954 0 2954 0 2954 0 2954 #> 425 TCGA-XF-A8HG-01 1 467 1 467 1 398 1 398 #> 426 TCGA-XF-A8HH-01 1 57 1 57 NA NA 1 57 #> 427 TCGA-XF-A8HI-01 1 544 1 544 NA NA 1 468 #> 428 TCGA-XF-A9SH-01 1 1971 1 1971 NA NA 1 547 #> 429 TCGA-XF-A9SI-01 0 2423 0 2423 0 2423 0 2423 #> 430 TCGA-XF-A9SJ-01 1 98 1 98 NA NA 1 98 #> 431 TCGA-XF-A9SK-01 1 486 1 486 NA NA 1 382 #> 432 TCGA-XF-A9SL-01 1 2020 0 2020 NA NA 0 2020 #> 433 TCGA-XF-A9SM-01 0 1048 0 1048 0 1048 0 1048 #> 434 TCGA-XF-A9SP-01 1 454 1 454 NA NA 1 310 #> 435 TCGA-XF-A9ST-01 1 128 NA 128 NA NA 0 128 #> 436 TCGA-XF-A9SU-01 1 182 1 182 NA NA 1 103 #> 437 TCGA-XF-A9SV-01 1 388 1 388 NA NA 1 237 #> 438 TCGA-XF-A9SW-01 1 362 1 362 NA NA 1 362 #> 439 TCGA-XF-A9SX-01 1 719 1 719 NA NA 1 475 #> 440 TCGA-XF-A9SY-01 0 640 0 640 NA NA 1 168 #> 441 TCGA-XF-A9SZ-01 1 859 1 859 NA NA 1 854 #> 442 TCGA-XF-A9T0-01 0 799 0 799 0 799 0 799 #> 443 TCGA-XF-A9T2-01 1 575 NA 575 NA NA 0 575 #> 444 TCGA-XF-A9T3-01 0 68 0 68 NA NA 0 68 #> 445 TCGA-XF-A9T4-01 1 495 1 495 NA NA 1 182 #> 446 TCGA-XF-A9T5-01 0 2027 0 2027 NA NA 1 664 #> 447 TCGA-XF-A9T6-01 0 64 0 64 NA NA 0 64 #> 448 TCGA-XF-A9T8-01 1 418 NA 418 NA NA 0 418 #> 449 TCGA-XF-AAME-01 1 2828 1 2828 NA NA 1 1651 #> 450 TCGA-XF-AAMG-01 0 3364 0 3364 0 3364 0 3364 #> 451 TCGA-XF-AAMH-01 1 344 1 344 NA NA 1 313 #> 452 TCGA-XF-AAMJ-01 1 1670 0 1670 0 1670 0 1670 #> 453 TCGA-XF-AAML-01 1 232 0 232 0 232 0 232 #> 454 TCGA-XF-AAMQ-01 0 2177 0 2177 0 2177 0 2177 #> 455 TCGA-XF-AAMR-01 0 2790 0 2790 0 2790 0 2790 #> 456 TCGA-XF-AAMT-01 1 90 1 90 NA NA 1 90 #> 457 TCGA-XF-AAMW-01 1 253 1 253 NA NA 1 253 #> 458 TCGA-XF-AAMX-01 1 206 0 206 0 206 0 206 #> 459 TCGA-XF-AAMY-01 0 3011 0 3011 1 637 1 637 #> 460 TCGA-XF-AAMZ-01 1 1348 1 1348 NA NA 1 1344 #> 461 TCGA-XF-AAN0-01 1 1718 1 1718 NA NA 1 603 #> 462 TCGA-XF-AAN1-01 1 941 1 941 NA NA 1 650 #> 463 TCGA-XF-AAN2-01 1 1869 0 1869 0 1869 0 1869 #> 464 TCGA-XF-AAN3-01 0 2625 0 2625 NA NA 0 2625 #> 465 TCGA-XF-AAN4-01 1 823 0 823 0 823 0 823 #> 466 TCGA-XF-AAN5-01 0 2293 0 2293 0 2293 0 2293 #> 467 TCGA-XF-AAN7-01 1 565 1 565 NA NA 1 321 #> 468 TCGA-XF-AAN8-01 1 118 NA 118 NA NA 0 118 #> 469 TCGA-YC-A89H-01 0 573 0 573 0 573 0 573 #> 470 TCGA-YC-A8S6-01 0 293 0 293 0 293 0 293 #> 471 TCGA-YC-A9TC-01 1 20 1 20 NA NA 1 20 #> 472 TCGA-YF-AA3L-01 0 364 0 364 0 364 0 364 #> 473 TCGA-YF-AA3M-01 0 415 0 415 1 381 1 381 #> 474 TCGA-ZF-A9R0-01 1 680 1 680 NA NA 1 559 #> 475 TCGA-ZF-A9R1-01 0 773 0 773 NA NA 1 758 #> 476 TCGA-ZF-A9R2-01 0 642 0 642 0 642 0 642 #> 477 TCGA-ZF-A9R3-01 1 949 1 949 1 917 1 917 #> 478 TCGA-ZF-A9R4-01 0 921 0 921 0 921 0 921 #> 479 TCGA-ZF-A9R5-01 0 1090 0 1090 0 1090 0 1090 #> 480 TCGA-ZF-A9R7-01 0 665 0 665 0 665 0 665 #> 481 TCGA-ZF-A9R9-01 1 864 1 864 NA NA 1 629 #> 482 TCGA-ZF-A9RC-01 0 2868 0 2868 0 2868 0 2868 #> 483 TCGA-ZF-A9RE-01 1 106 1 106 NA NA 1 106 #> 484 TCGA-ZF-A9RF-01 0 1949 0 1949 1 1565 1 1565 #> 485 TCGA-ZF-A9RL-01 0 2703 0 2703 1 1064 1 1064 #> 486 TCGA-ZF-A9RM-01 0 1455 0 1455 0 1455 0 1455 #> 487 TCGA-ZF-A9RN-01 1 615 1 615 NA NA 1 516 #> 488 TCGA-ZF-AA4N-01 1 88 1 88 NA NA 1 88 #> 489 TCGA-ZF-AA4R-01 1 1036 1 1036 NA NA 1 750 #> 490 TCGA-ZF-AA4T-01 1 599 1 599 NA NA 1 511 #> 491 TCGA-ZF-AA4U-01 1 262 1 262 NA NA 1 199 #> 492 TCGA-ZF-AA4V-01 0 1806 0 1806 0 1806 0 1806 #> 493 TCGA-ZF-AA4W-01 0 1830 0 1830 1 1679 1 1679 #> 494 TCGA-ZF-AA4X-01 0 2044 0 2044 1 1665 1 1665 #> 495 TCGA-ZF-AA51-01 0 1714 0 1714 0 1714 0 1714 #> 496 TCGA-ZF-AA52-01 1 1077 NA 1077 NA NA 0 1077 #> 497 TCGA-ZF-AA53-01 0 1761 0 1761 0 1761 0 1761 #> 498 TCGA-ZF-AA54-01 1 590 NA 590 NA NA 0 590 #> 499 TCGA-ZF-AA56-01 1 259 1 259 NA NA 1 248 #> 500 TCGA-ZF-AA58-01 0 1649 0 1649 NA NA 0 1649 #> 501 TCGA-ZF-AA5H-01 0 897 0 897 NA NA 1 177 #> 502 TCGA-ZF-AA5N-01 1 168 1 168 NA NA 1 168 #> 503 TCGA-ZF-AA5P-01 0 372 0 372 NA NA 0 372 #> 504 TCGA-3C-AAAU-01 0 4047 0 4047 1 1808 1 1808 #> 505 TCGA-3C-AALI-01 0 4005 0 4005 0 4005 0 4005 #> 506 TCGA-3C-AALJ-01 0 1474 0 1474 0 1474 0 1474 #> 507 TCGA-3C-AALK-01 0 1448 0 1448 NA NA 0 1448 #> 508 TCGA-4H-AAAK-01 0 348 0 348 0 348 0 348 #> 509 TCGA-5L-AAT0-01 0 1477 0 1477 NA NA 0 1477 #> 510 TCGA-5L-AAT1-01 0 1471 0 1471 NA NA 0 1471 #> 511 TCGA-5T-A9QA-01 0 303 0 303 NA NA 0 303 #> 512 TCGA-A1-A0SB-01 0 259 0 259 0 259 0 259 #> 513 TCGA-A1-A0SD-01 0 437 0 437 0 437 0 437 #> 514 TCGA-A1-A0SE-01 0 1321 0 1321 0 1321 0 1321 #> 515 TCGA-A1-A0SF-01 0 1463 0 1463 0 1463 0 1463 #> 516 TCGA-A1-A0SG-01 0 434 0 434 0 434 0 434 #> 517 TCGA-A1-A0SH-01 0 1437 0 1437 0 1437 0 1437 #> 518 TCGA-A1-A0SI-01 0 635 0 635 0 635 0 635 #> 519 TCGA-A1-A0SJ-01 0 416 0 416 0 416 0 416 #> 520 TCGA-A1-A0SK-01 1 967 1 967 NA NA 1 967 #> 521 TCGA-A1-A0SM-01 0 242 0 242 0 242 0 242 #> 522 TCGA-A1-A0SN-01 0 1196 0 1196 0 1196 0 1196 #> 523 TCGA-A1-A0SO-01 0 852 0 852 0 852 0 852 #> 524 TCGA-A1-A0SP-01 0 584 0 584 0 584 0 584 #> 525 TCGA-A1-A0SQ-01 0 554 0 554 0 554 0 554 #> 526 TCGA-A2-A04N-01 0 4354 0 4354 0 4354 0 4354 #> 527 TCGA-A2-A04P-01 1 548 1 548 NA NA 1 102 #> 528 TCGA-A2-A04Q-01 0 2385 0 2385 0 2385 0 2385 #> 529 TCGA-A2-A04R-01 0 3709 0 3709 0 3709 0 3709 #> 530 TCGA-A2-A04T-01 0 2246 0 2246 0 2246 0 2246 #> 531 TCGA-A2-A04U-01 0 2654 0 2654 0 2654 0 2654 #> 532 TCGA-A2-A04V-01 1 1920 1 1920 1 1470 1 1470 #> 533 TCGA-A2-A04W-01 0 3102 0 3102 0 3102 0 3102 #> 534 TCGA-A2-A04X-01 0 1686 0 1686 0 1686 0 1686 #> 535 TCGA-A2-A04Y-01 0 1099 0 1099 0 1099 0 1099 #> 536 TCGA-A2-A0CK-01 0 4159 0 4159 1 1364 1 1364 #> 537 TCGA-A2-A0CL-01 0 3015 0 3015 NA NA 0 3015 #> 538 TCGA-A2-A0CM-01 1 754 1 754 1 382 1 382 #> 539 TCGA-A2-A0CO-01 1 3492 0 3492 NA NA 0 3492 #> 540 TCGA-A2-A0CP-01 0 2813 0 2813 0 2813 0 2813 #> 541 TCGA-A2-A0CQ-01 0 2695 0 2695 0 2695 0 2695 #> 542 TCGA-A2-A0CR-01 0 3283 0 3283 NA NA 0 3283 #> 543 TCGA-A2-A0CS-01 1 2348 0 2348 NA NA 0 2348 #> 544 TCGA-A2-A0CT-01 0 2289 0 2289 0 2289 0 2289 #> 545 TCGA-A2-A0CU-01 1 158 0 158 NA NA 0 158 #> 546 TCGA-A2-A0CV-01 0 3011 0 3011 0 3011 0 3011 #> 547 TCGA-A2-A0CW-01 0 3283 0 3283 0 3283 0 3283 #> 548 TCGA-A2-A0CX-01 0 1728 0 1728 0 1728 0 1728 #> 549 TCGA-A2-A0CY-01 0 1673 0 1673 0 1673 0 1673 #> 550 TCGA-A2-A0CZ-01 0 1616 0 1616 NA NA 0 1616 #> 551 TCGA-A2-A0D0-01 0 2048 0 2048 0 2048 0 2048 #> 552 TCGA-A2-A0D1-01 0 1051 0 1051 0 1051 0 1051 #> 553 TCGA-A2-A0D2-01 0 1027 0 1027 0 1027 0 1027 #> 554 TCGA-A2-A0D3-01 0 1873 0 1873 0 1873 0 1873 #> 555 TCGA-A2-A0D4-01 0 767 0 767 0 767 0 767 #> 556 TCGA-A2-A0EM-01 0 3094 0 3094 0 3094 0 3094 #> 557 TCGA-A2-A0EN-01 0 4088 0 4088 0 4088 0 4088 #> 558 TCGA-A2-A0EO-01 0 2442 0 2442 NA NA 0 2442 #> 559 TCGA-A2-A0EP-01 0 3603 0 3603 0 3603 0 3603 #> 560 TCGA-A2-A0EQ-01 0 2426 0 2426 0 2426 0 2426 #> 561 TCGA-A2-A0ER-01 0 2263 0 2263 0 2263 0 2263 #> 562 TCGA-A2-A0ES-01 0 2190 0 2190 0 2190 0 2190 #> 563 TCGA-A2-A0ET-01 0 1066 0 1066 0 1066 0 1066 #> 564 TCGA-A2-A0EU-01 0 1043 0 1043 0 1043 0 1043 #> 565 TCGA-A2-A0EV-01 0 968 0 968 0 968 0 968 #> 566 TCGA-A2-A0EW-01 1 1884 1 1884 NA NA 1 1353 #> 567 TCGA-A2-A0EX-01 0 752 0 752 0 752 0 752 #> 568 TCGA-A2-A0EY-01 0 1925 0 1925 0 1925 0 1925 #> 569 TCGA-A2-A0ST-01 0 3017 0 3017 0 3017 0 3017 #> 570 TCGA-A2-A0SU-01 0 1662 0 1662 0 1662 0 1662 #> 571 TCGA-A2-A0SV-01 1 825 1 825 NA NA 1 825 #> 572 TCGA-A2-A0SW-01 1 1365 1 1365 NA NA 1 653 #> 573 TCGA-A2-A0SX-01 0 1534 0 1534 1 1239 1 1239 #> 574 TCGA-A2-A0SY-01 0 1347 0 1347 0 1347 0 1347 #> 575 TCGA-A2-A0T0-01 0 533 0 533 0 533 0 533 #> 576 TCGA-A2-A0T1-01 0 521 0 521 0 521 0 521 #> 577 TCGA-A2-A0T2-01 1 255 1 255 NA NA 1 255 #> 578 TCGA-A2-A0T3-01 0 1516 0 1516 0 1516 0 1516 #> 579 TCGA-A2-A0T4-01 0 624 0 624 0 624 0 624 #> 580 TCGA-A2-A0T5-01 0 531 0 531 0 531 0 531 #> 581 TCGA-A2-A0T6-01 0 575 0 575 0 575 0 575 #> 582 TCGA-A2-A0T7-01 0 631 0 631 0 631 0 631 #> 583 TCGA-A2-A0YC-01 0 990 0 990 NA NA 1 756 #> 584 TCGA-A2-A0YD-01 0 769 0 769 0 769 0 769 #> 585 TCGA-A2-A0YE-01 0 554 0 554 0 554 0 554 #> 586 TCGA-A2-A0YF-01 0 1535 0 1535 0 1535 0 1535 #> 587 TCGA-A2-A0YG-01 0 666 0 666 0 666 0 666 #> 588 TCGA-A2-A0YH-01 0 659 0 659 0 659 0 659 #> 589 TCGA-A2-A0YI-01 0 1505 0 1505 0 1505 0 1505 #> 590 TCGA-A2-A0YJ-01 0 566 0 566 1 559 1 559 #> 591 TCGA-A2-A0YK-01 0 588 0 588 NA NA 0 588 #> 592 TCGA-A2-A0YL-01 0 1474 0 1474 0 1474 0 1474 #> 593 TCGA-A2-A0YM-01 0 965 0 965 0 965 0 965 #> 594 TCGA-A2-A0YT-01 1 723 0 723 0 723 0 723 #> 595 TCGA-A2-A1FV-01 0 714 0 714 0 714 0 714 #> 596 TCGA-A2-A1FW-01 0 528 0 528 0 528 0 528 #> 597 TCGA-A2-A1FX-01 0 1847 0 1847 0 1847 0 1847 #> 598 TCGA-A2-A1FZ-01 0 683 0 683 0 683 0 683 #> 599 TCGA-A2-A1G0-01 0 616 0 616 0 616 0 616 #> 600 TCGA-A2-A1G1-01 0 584 0 584 0 584 0 584 #> 601 TCGA-A2-A1G4-01 0 595 0 595 0 595 0 595 #> 602 TCGA-A2-A1G6-01 0 501 0 501 0 501 0 501 #> 603 TCGA-A2-A259-01 0 1596 0 1596 NA NA 0 1596 #> 604 TCGA-A2-A25A-01 0 3276 0 3276 0 3276 0 3276 #> 605 TCGA-A2-A25B-01 0 1291 0 1291 NA NA 1 1290 #> 606 TCGA-A2-A25C-01 0 523 0 523 0 523 0 523 #> 607 TCGA-A2-A25D-01 0 552 0 552 NA NA 0 552 #> 608 TCGA-A2-A25E-01 0 3204 0 3204 1 2989 1 2989 #> 609 TCGA-A2-A25F-01 0 322 0 322 0 322 0 322 #> 610 TCGA-A2-A3KC-01 0 1102 0 1102 0 1102 0 1102 #> 611 TCGA-A2-A3KD-01 0 1206 0 1206 NA NA 0 1206 #> 612 TCGA-A2-A3XS-01 1 1032 1 1032 1 682 1 682 #> 613 TCGA-A2-A3XT-01 0 2770 0 2770 0 2770 0 2770 #> 614 TCGA-A2-A3XU-01 1 912 1 912 1 574 1 574 #> 615 TCGA-A2-A3XV-01 0 996 0 996 0 996 0 996 #> 616 TCGA-A2-A3XW-01 0 1712 0 1712 0 1712 0 1712 #> 617 TCGA-A2-A3XX-01 1 1439 0 1439 0 1439 0 1439 #> 618 TCGA-A2-A3XY-01 1 1093 1 1093 1 802 1 802 #> 619 TCGA-A2-A3XZ-01 0 1532 0 1532 0 1532 0 1532 #> 620 TCGA-A2-A3Y0-01 0 1546 0 1546 NA NA 0 1546 #> 621 TCGA-A2-A4RW-01 0 222 0 222 0 222 0 222 #> 622 TCGA-A2-A4RX-01 0 742 0 742 0 742 0 742 #> 623 TCGA-A2-A4RY-01 0 648 0 648 0 648 0 648 #> 624 TCGA-A2-A4S0-01 0 706 0 706 0 706 0 706 #> 625 TCGA-A2-A4S1-01 0 820 0 820 0 820 0 820 #> 626 TCGA-A2-A4S2-01 0 643 0 643 0 643 0 643 #> 627 TCGA-A2-A4S3-01 0 666 0 666 0 666 0 666 #> 628 TCGA-A7-A0CD-01 0 1165 0 1165 0 1165 0 1165 #> 629 TCGA-A7-A0CE-01 0 1074 0 1074 0 1074 0 1074 #> 630 TCGA-A7-A0CE-11 0 1074 0 1074 0 1074 0 1074 #> 631 TCGA-A7-A0CG-01 0 1043 0 1043 NA NA 0 1043 #> 632 TCGA-A7-A0CH-01 0 1079 0 1079 0 1079 0 1079 #> 633 TCGA-A7-A0CH-11 0 1079 0 1079 0 1079 0 1079 #> 634 TCGA-A7-A0CJ-01 0 931 0 931 NA NA 0 931 #> 635 TCGA-A7-A0D9-01 0 1139 0 1139 0 1139 0 1139 #> 636 TCGA-A7-A0D9-11 0 1139 0 1139 0 1139 0 1139 #> 637 TCGA-A7-A0DA-01 0 1085 0 1085 0 1085 0 1085 #> 638 TCGA-A7-A0DB-11 0 1007 0 1007 NA NA 0 1007 #> 639 TCGA-A7-A0DB-01 0 1007 0 1007 NA NA 0 1007 #> 640 TCGA-A7-A0DC-01 0 906 0 906 0 906 0 906 #> 641 TCGA-A7-A0DC-11 0 906 0 906 0 906 0 906 #> 642 TCGA-A7-A13D-01 0 965 0 965 0 965 0 965 #> 643 TCGA-A7-A13E-11 1 614 1 614 1 556 1 556 #> 644 TCGA-A7-A13E-01 1 614 1 614 1 556 1 556 #> 645 TCGA-A7-A13F-01 0 765 0 765 0 765 0 765 #> 646 TCGA-A7-A13F-11 0 765 0 765 0 765 0 765 #> 647 TCGA-A7-A13G-01 0 718 0 718 0 718 1 586 #> 648 TCGA-A7-A13G-11 0 718 0 718 0 718 1 586 #> 649 TCGA-A7-A13H-01 0 899 0 899 0 899 1 795 #> 650 TCGA-A7-A26E-01 0 954 0 954 0 954 0 954 #> 651 TCGA-A7-A26F-01 0 738 0 738 0 738 0 738 #> 652 TCGA-A7-A26G-01 0 722 0 722 0 722 0 722 #> 653 TCGA-A7-A26H-01 0 724 0 724 1 291 1 291 #> 654 TCGA-A7-A26I-01 0 661 0 661 0 661 0 661 #> 655 TCGA-A7-A26J-01 0 627 0 627 0 627 0 627 #> 656 TCGA-A7-A2KD-01 0 679 0 679 0 679 0 679 #> 657 TCGA-A7-A3IY-01 0 345 0 345 0 345 0 345 #> 658 TCGA-A7-A3IZ-01 0 322 0 322 0 322 0 322 #> 659 TCGA-A7-A3J0-01 0 313 0 313 0 313 0 313 #> 660 TCGA-A7-A3J1-01 0 343 0 343 0 343 0 343 #> 661 TCGA-A7-A3RF-01 0 408 0 408 1 174 1 174 #> 662 TCGA-A7-A425-01 0 447 0 447 1 419 1 419 #> 663 TCGA-A7-A426-01 0 364 0 364 0 364 0 364 #> 664 TCGA-A7-A4SA-01 0 454 0 454 0 454 0 454 #> 665 TCGA-A7-A4SB-01 0 418 0 418 0 418 0 418 #> 666 TCGA-A7-A4SC-01 0 446 0 446 0 446 0 446 #> 667 TCGA-A7-A4SD-01 0 441 0 441 0 441 0 441 #> 668 TCGA-A7-A4SE-01 0 644 0 644 0 644 0 644 #> 669 TCGA-A7-A4SF-01 0 545 0 545 NA NA 0 545 #> 670 TCGA-A7-A56D-01 0 448 0 448 0 448 0 448 #> 671 TCGA-A7-A5ZV-01 0 368 0 368 0 368 0 368 #> 672 TCGA-A7-A5ZW-01 0 326 0 326 0 326 0 326 #> 673 TCGA-A7-A5ZX-01 0 336 0 336 NA NA 0 336 #> 674 TCGA-A7-A6VV-01 0 313 0 313 0 313 0 313 #> 675 TCGA-A7-A6VW-01 0 285 0 285 NA NA 0 285 #> 676 TCGA-A7-A6VX-01 0 317 0 317 0 317 0 317 #> 677 TCGA-A7-A6VY-01 0 266 0 266 0 266 0 266 #> 678 TCGA-A8-A06N-01 0 0 0 0 0 0 0 0 #> 679 TCGA-A8-A06O-01 0 396 0 396 0 396 0 396 #> 680 TCGA-A8-A06P-01 0 396 0 396 0 396 0 396 #> 681 TCGA-A8-A06Q-01 0 31 0 31 0 31 0 31 #> 682 TCGA-A8-A06R-01 0 547 0 547 0 547 0 547 #> 683 TCGA-A8-A06T-01 0 1614 0 1614 0 1614 0 1614 #> 684 TCGA-A8-A06U-01 1 883 0 883 0 883 0 883 #> 685 TCGA-A8-A06X-01 1 943 0 943 0 943 0 943 #> 686 TCGA-A8-A06Y-01 0 791 0 791 1 791 1 791 #> 687 TCGA-A8-A06Z-01 0 31 0 31 NA NA 0 31 #> 688 TCGA-A8-A075-01 0 518 0 518 0 518 0 518 #> 689 TCGA-A8-A076-01 0 1642 0 1642 0 1642 0 1642 #> 690 TCGA-A8-A079-01 0 274 0 274 0 274 0 274 #> 691 TCGA-A8-A07B-01 0 1308 0 1308 0 1308 0 1308 #> 692 TCGA-A8-A07C-01 0 1034 0 1034 0 1034 0 1034 #> 693 TCGA-A8-A07E-01 0 608 0 608 0 608 0 608 #> 694 TCGA-A8-A07F-01 0 577 0 577 0 577 0 577 #> 695 TCGA-A8-A07G-01 0 577 0 577 0 577 0 577 #> 696 TCGA-A8-A07I-01 0 426 0 426 0 426 0 426 #> 697 TCGA-A8-A07J-01 0 365 0 365 0 365 0 365 #> 698 TCGA-A8-A07L-01 0 975 0 975 0 975 0 975 #> 699 TCGA-A8-A07O-01 0 304 0 304 0 304 0 304 #> 700 TCGA-A8-A07P-01 0 334 0 334 0 334 0 334 #> 701 TCGA-A8-A07R-01 0 273 0 273 NA NA 0 273 #> 702 TCGA-A8-A07S-01 0 243 0 243 NA NA 0 243 #> 703 TCGA-A8-A07U-01 0 760 0 760 0 760 0 760 #> 704 TCGA-A8-A07W-01 0 304 0 304 NA NA 0 304 #> 705 TCGA-A8-A07Z-01 0 1371 0 1371 0 1371 0 1371 #> 706 TCGA-A8-A081-01 0 0 0 0 0 0 0 0 #> 707 TCGA-A8-A082-01 0 549 0 549 0 549 0 549 #> 708 TCGA-A8-A083-01 0 0 0 0 0 0 0 0 #> 709 TCGA-A8-A084-01 0 458 0 458 NA NA 0 458 #> 710 TCGA-A8-A085-01 0 1124 0 1124 0 1124 0 1124 #> 711 TCGA-A8-A086-01 0 396 0 396 0 396 0 396 #> 712 TCGA-A8-A08A-01 0 30 0 30 0 30 0 30 #> 713 TCGA-A8-A08B-01 0 1156 0 1156 0 1156 0 1156 #> 714 TCGA-A8-A08C-01 0 881 0 881 0 881 0 881 #> 715 TCGA-A8-A08F-01 0 1004 0 1004 0 1004 0 1004 #> 716 TCGA-A8-A08G-01 0 607 0 607 0 607 0 607 #> 717 TCGA-A8-A08H-01 0 0 0 0 0 0 0 0 #> 718 TCGA-A8-A08I-01 0 365 0 365 0 365 0 365 #> 719 TCGA-A8-A08J-01 1 1127 1 1127 NA NA 1 1127 #> 720 TCGA-A8-A08L-01 1 304 0 304 0 304 0 304 #> 721 TCGA-A8-A08O-01 0 943 0 943 NA NA 1 762 #> 722 TCGA-A8-A08P-01 0 943 0 943 0 943 0 943 #> 723 TCGA-A8-A08R-01 0 30 0 30 0 30 0 30 #> 724 TCGA-A8-A08S-01 0 1004 0 1004 0 1004 0 1004 #> 725 TCGA-A8-A08T-01 1 3409 1 3409 NA NA 1 2557 #> 726 TCGA-A8-A08X-01 0 1308 0 1308 1 366 1 366 #> 727 TCGA-A8-A08Z-01 0 1217 0 1217 0 1217 0 1217 #> 728 TCGA-A8-A090-01 0 0 0 0 0 0 0 0 #> 729 TCGA-A8-A091-01 0 1004 0 1004 1 243 1 243 #> 730 TCGA-A8-A092-01 0 942 0 942 0 942 0 942 #> 731 TCGA-A8-A093-01 0 546 0 546 0 546 0 546 #> 732 TCGA-A8-A094-01 0 0 0 0 0 0 0 0 #> 733 TCGA-A8-A095-01 0 1277 0 1277 0 1277 0 1277 #> 734 TCGA-A8-A096-01 0 0 0 0 0 0 0 0 #> 735 TCGA-A8-A097-01 0 365 0 365 0 365 0 365 #> 736 TCGA-A8-A099-01 0 304 0 304 NA NA 0 304 #> 737 TCGA-A8-A09A-01 0 304 0 304 NA NA 0 304 #> 738 TCGA-A8-A09B-01 0 365 0 365 0 365 0 365 #> 739 TCGA-A8-A09C-01 0 31 0 31 NA NA 0 31 #> 740 TCGA-A8-A09D-01 0 1522 0 1522 0 1522 0 1522 #> 741 TCGA-A8-A09E-01 0 1492 0 1492 NA NA 0 1492 #> 742 TCGA-A8-A09G-01 0 0 0 0 0 0 0 0 #> 743 TCGA-A8-A09I-01 0 1371 0 1371 0 1371 0 1371 #> 744 TCGA-A8-A09K-01 0 912 0 912 0 912 0 912 #> 745 TCGA-A8-A09M-01 0 1006 0 1006 0 1006 0 1006 #> 746 TCGA-A8-A09N-01 0 31 0 31 0 31 0 31 #> 747 TCGA-A8-A09Q-01 0 761 0 761 NA NA 0 761 #> 748 TCGA-A8-A09R-01 0 273 0 273 0 273 0 273 #> 749 TCGA-A8-A09T-01 0 579 0 579 0 579 0 579 #> 750 TCGA-A8-A09V-01 0 457 0 457 0 457 0 457 #> 751 TCGA-A8-A09W-01 0 30 0 30 NA NA 0 30 #> 752 TCGA-A8-A09X-01 1 426 NA 426 NA NA 0 426 #> 753 TCGA-A8-A09Z-01 0 0 0 0 NA NA 0 0 #> 754 TCGA-A8-A0A1-01 0 365 0 365 0 365 0 365 #> 755 TCGA-A8-A0A2-01 0 579 0 579 0 579 0 579 #> 756 TCGA-A8-A0A4-01 0 396 0 396 0 396 0 396 #> 757 TCGA-A8-A0A6-01 0 640 0 640 0 640 0 640 #> 758 TCGA-A8-A0A7-01 0 30 0 30 0 30 0 30 #> 759 TCGA-A8-A0A9-01 0 822 0 822 0 822 0 822 #> 760 TCGA-A8-A0AB-01 0 518 0 518 0 518 0 518 #> 761 TCGA-A8-A0AD-01 0 1157 0 1157 0 1157 0 1157 #> 762 TCGA-AC-A23C-01 0 585 0 585 0 585 0 585 #> 763 TCGA-AC-A23E-01 0 698 0 698 0 698 0 698 #> 764 TCGA-AC-A23G-01 0 2248 0 2248 0 2248 0 2248 #> 765 TCGA-AC-A23H-01 1 174 1 174 NA NA 1 174 #> 766 TCGA-AC-A23H-11 1 174 1 174 NA NA 1 174 #> 767 TCGA-AC-A2B8-01 0 677 0 677 0 677 1 654 #> 768 TCGA-AC-A2BK-01 0 2222 0 2222 0 2222 0 2222 #> 769 TCGA-AC-A2BM-01 0 3022 0 3022 0 3022 0 3022 #> 770 TCGA-AC-A2FB-01 0 1234 0 1234 0 1234 0 1234 #> 771 TCGA-AC-A2FB-11 0 1234 0 1234 0 1234 0 1234 #> 772 TCGA-AC-A2FE-01 1 2636 1 2636 1 766 1 766 #> 773 TCGA-AC-A2FF-01 0 2759 0 2759 0 2759 0 2759 #> 774 TCGA-AC-A2FF-11 0 2759 0 2759 0 2759 0 2759 #> 775 TCGA-AC-A2FG-01 0 1853 0 1853 0 1853 0 1853 #> 776 TCGA-AC-A2FK-01 0 2650 0 2650 0 2650 0 2650 #> 777 TCGA-AC-A2FM-01 1 792 1 792 1 780 1 780 #> 778 TCGA-AC-A2FM-11 1 792 1 792 1 780 1 780 #> 779 TCGA-AC-A2FO-01 0 2255 0 2255 0 2255 0 2255 #> 780 TCGA-AC-A2QH-01 0 1005 0 1005 0 1005 0 1005 #> 781 TCGA-AC-A2QI-01 0 588 0 588 0 588 0 588 #> 782 TCGA-AC-A2QJ-01 1 446 1 446 1 237 1 237 #> 783 TCGA-AC-A3BB-01 0 987 0 987 0 987 0 987 #> 784 TCGA-AC-A3EH-01 1 197 0 197 0 197 0 197 #> 785 TCGA-AC-A3HN-01 0 496 0 496 0 496 0 496 #> 786 TCGA-AC-A3OD-01 0 451 0 451 0 451 0 451 #> 787 TCGA-AC-A3QP-01 0 675 0 675 0 675 0 675 #> 788 TCGA-AC-A3QQ-01 0 734 0 734 NA NA 0 734 #> 789 TCGA-AC-A3TM-01 0 762 0 762 0 762 0 762 #> 790 TCGA-AC-A3TN-01 0 456 0 456 0 456 0 456 #> 791 TCGA-AC-A3W5-01 0 504 0 504 NA NA 0 504 #> 792 TCGA-AC-A3W6-01 0 602 0 602 0 602 0 602 #> 793 TCGA-AC-A3W7-01 0 471 0 471 0 471 0 471 #> 794 TCGA-AC-A3YI-01 0 707 0 707 0 707 0 707 #> 795 TCGA-AC-A3YJ-01 0 754 0 754 0 754 0 754 #> 796 TCGA-AC-A4ZE-01 0 890 0 890 0 890 0 890 #> 797 TCGA-AC-A5EH-01 0 511 0 511 0 511 0 511 #> 798 TCGA-AC-A5XS-01 0 588 0 588 0 588 0 588 #> 799 TCGA-AC-A5XU-01 0 455 0 455 0 455 0 455 #> 800 TCGA-AC-A62V-01 1 348 1 348 NA NA 1 348 #> 801 TCGA-AC-A62X-01 0 417 0 417 0 417 0 417 #> 802 TCGA-AC-A62Y-01 0 530 0 530 NA NA 0 530 #> 803 TCGA-AC-A6IV-01 0 568 0 568 0 568 0 568 #> 804 TCGA-AC-A6IW-01 0 413 0 413 0 413 0 413 #> 805 TCGA-AC-A6IX-06 0 373 0 373 0 373 0 373 #> 806 TCGA-AC-A6IX-01 0 373 0 373 0 373 0 373 #> 807 TCGA-AC-A6NO-01 0 51 0 51 0 51 0 51 #> 808 TCGA-AC-A7VB-01 0 250 0 250 0 250 0 250 #> 809 TCGA-AC-A7VC-01 0 1 0 1 0 1 0 1 #> 810 TCGA-AC-A8OP-01 0 614 0 614 0 614 0 614 #> 811 TCGA-AC-A8OQ-01 0 34 0 34 0 34 0 34 #> 812 TCGA-AC-A8OR-01 0 40 0 40 0 40 0 40 #> 813 TCGA-AC-A8OS-01 0 70 0 70 0 70 0 70 #> 814 TCGA-AN-A03X-01 0 10 0 10 0 10 0 10 #> 815 TCGA-AN-A03Y-01 0 10 0 10 0 10 0 10 #> 816 TCGA-AN-A041-01 0 7 0 7 0 7 0 7 #> 817 TCGA-AN-A046-01 0 10 0 10 0 10 0 10 #> 818 TCGA-AN-A049-01 0 19 0 19 NA NA 0 19 #> 819 TCGA-AN-A04A-01 0 90 0 90 NA NA 0 90 #> 820 TCGA-AN-A04C-01 0 54 0 54 NA NA 0 54 #> 821 TCGA-AN-A04D-01 0 52 0 52 NA NA 0 52 #> 822 TCGA-AN-A0AJ-01 0 303 0 303 0 303 0 303 #> 823 TCGA-AN-A0AK-01 0 224 0 224 0 224 0 224 #> 824 TCGA-AN-A0AL-01 0 227 0 227 0 227 0 227 #> 825 TCGA-AN-A0AM-01 0 5 0 5 0 5 0 5 #> 826 TCGA-AN-A0AR-01 0 10 0 10 0 10 0 10 #> 827 TCGA-AN-A0AS-01 0 10 0 10 0 10 0 10 #> 828 TCGA-AN-A0AT-01 0 10 0 10 0 10 0 10 #> 829 TCGA-AN-A0FD-01 0 196 0 196 0 196 0 196 #> 830 TCGA-AN-A0FF-01 0 172 0 172 0 172 0 172 #> 831 TCGA-AN-A0FJ-01 0 242 0 242 NA NA 0 242 #> 832 TCGA-AN-A0FK-01 0 213 0 213 0 213 0 213 #> 833 TCGA-AN-A0FL-01 0 231 0 231 0 231 0 231 #> 834 TCGA-AN-A0FN-01 0 218 0 218 0 218 0 218 #> 835 TCGA-AN-A0FS-01 0 210 0 210 0 210 0 210 #> 836 TCGA-AN-A0FT-01 0 214 0 214 0 214 0 214 #> 837 TCGA-AN-A0FV-01 0 10 0 10 0 10 0 10 #> 838 TCGA-AN-A0FW-01 0 11 0 11 0 11 0 11 #> 839 TCGA-AN-A0FX-01 0 10 0 10 0 10 0 10 #> 840 TCGA-AN-A0FY-01 0 10 0 10 0 10 0 10 #> 841 TCGA-AN-A0FZ-01 0 10 0 10 0 10 0 10 #> 842 TCGA-AN-A0G0-01 0 16 0 16 0 16 0 16 #> 843 TCGA-AN-A0XL-01 0 163 0 163 0 163 0 163 #> 844 TCGA-AN-A0XN-01 0 10 0 10 0 10 0 10 #> 845 TCGA-AN-A0XO-01 0 375 0 375 0 375 0 375 #> 846 TCGA-AN-A0XP-01 0 9 0 9 0 9 0 9 #> 847 TCGA-AN-A0XR-01 0 10 0 10 0 10 0 10 #> 848 TCGA-AN-A0XS-01 0 10 0 10 0 10 0 10 #> 849 TCGA-AN-A0XT-01 0 10 0 10 0 10 0 10 #> 850 TCGA-AN-A0XU-01 0 10 0 10 0 10 0 10 #> 851 TCGA-AN-A0XV-01 0 162 0 162 0 162 0 162 #> 852 TCGA-AN-A0XW-01 0 170 0 170 0 170 0 170 #> 853 TCGA-AO-A03L-01 0 2442 0 2442 0 2442 0 2442 #> 854 TCGA-AO-A03M-01 0 1866 0 1866 0 1866 0 1866 #> 855 TCGA-AO-A03N-01 0 2031 0 2031 1 1645 1 1645 #> 856 TCGA-AO-A03O-01 1 2483 0 2483 0 2483 0 2483 #> 857 TCGA-AO-A03P-01 1 2911 1 2911 NA NA 1 1922 #> 858 TCGA-AO-A03R-01 0 2091 0 2091 0 2091 0 2091 #> 859 TCGA-AO-A03T-01 0 2124 0 2124 0 2124 0 2124 #> 860 TCGA-AO-A03U-01 1 1793 0 1793 0 1793 1 1614 #> 861 TCGA-AO-A03V-01 0 1351 0 1351 0 1351 0 1351 #> 862 TCGA-AO-A0J2-01 0 997 0 997 0 997 0 997 #> 863 TCGA-AO-A0J3-01 0 651 0 651 0 651 0 651 #> 864 TCGA-AO-A0J4-01 0 1587 0 1587 0 1587 0 1587 #> 865 TCGA-AO-A0J5-01 1 792 1 792 NA NA 1 792 #> 866 TCGA-AO-A0J6-01 0 1140 0 1140 0 1140 0 1140 #> 867 TCGA-AO-A0J7-01 0 618 0 618 0 618 0 618 #> 868 TCGA-AO-A0J8-01 0 680 0 680 0 680 0 680 #> 869 TCGA-AO-A0J9-01 0 1613 0 1613 1 1066 1 1066 #> 870 TCGA-AO-A0JA-01 0 655 0 655 1 143 1 143 #> 871 TCGA-AO-A0JB-01 0 1542 0 1542 0 1542 0 1542 #> 872 TCGA-AO-A0JC-01 0 1547 0 1547 0 1547 0 1547 #> 873 TCGA-AO-A0JD-01 0 2190 0 2190 0 2190 0 2190 #> 874 TCGA-AO-A0JE-01 0 2335 0 2335 NA NA 0 2335 #> 875 TCGA-AO-A0JF-01 0 1980 0 1980 0 1980 0 1980 #> 876 TCGA-AO-A0JG-01 0 798 0 798 NA NA 0 798 #> 877 TCGA-AO-A0JI-01 0 1528 0 1528 0 1528 0 1528 #> 878 TCGA-AO-A0JJ-01 0 1887 0 1887 0 1887 0 1887 #> 879 TCGA-AO-A0JL-01 0 1683 0 1683 0 1683 0 1683 #> 880 TCGA-AO-A0JM-01 0 2184 0 2184 0 2184 0 2184 #> 881 TCGA-AO-A124-01 0 3506 0 3506 0 3506 0 3506 #> 882 TCGA-AO-A125-01 0 3456 0 3456 0 3456 0 3456 #> 883 TCGA-AO-A126-01 0 3307 0 3307 1 267 1 267 #> 884 TCGA-AO-A128-01 0 3248 0 3248 0 3248 0 3248 #> 885 TCGA-AO-A129-01 0 3286 0 3286 0 3286 0 3286 #> 886 TCGA-AO-A12A-01 0 3112 0 3112 NA NA 0 3112 #> 887 TCGA-AO-A12B-01 0 2989 0 2989 0 2989 0 2989 #> 888 TCGA-AO-A12C-01 0 2372 0 2372 0 2372 0 2372 #> 889 TCGA-AO-A12D-01 0 2515 0 2515 0 2515 0 2515 #> 890 TCGA-AO-A12E-01 0 2142 0 2142 0 2142 0 2142 #> 891 TCGA-AO-A12F-01 0 1842 0 1842 0 1842 0 1842 #> 892 TCGA-AO-A12G-01 0 1639 0 1639 0 1639 0 1639 #> 893 TCGA-AO-A12H-01 0 1234 0 1234 0 1234 0 1234 #> 894 TCGA-AO-A1KO-01 0 622 0 622 0 622 0 622 #> 895 TCGA-AO-A1KP-01 0 2953 0 2953 0 2953 0 2953 #> 896 TCGA-AO-A1KQ-01 0 1882 0 1882 0 1882 0 1882 #> 897 TCGA-AO-A1KR-01 0 2513 0 2513 0 2513 0 2513 #> 898 TCGA-AO-A1KS-01 0 350 0 350 0 350 0 350 #> 899 TCGA-AO-A1KT-01 0 541 0 541 0 541 0 541 #> 900 TCGA-AQ-A04H-01 0 754 0 754 0 754 0 754 #> 901 TCGA-AQ-A04J-01 0 819 0 819 0 819 0 819 #> 902 TCGA-AQ-A04L-01 0 3957 0 3957 0 3957 0 3957 #> 903 TCGA-AQ-A0Y5-01 1 172 0 172 0 172 0 172 #> 904 TCGA-AQ-A1H2-01 0 475 0 475 0 475 0 475 #> 905 TCGA-AQ-A1H3-01 0 989 0 989 0 989 0 989 #> 906 TCGA-AQ-A54N-01 0 78 0 78 0 78 0 78 #> 907 TCGA-AQ-A54O-01 0 1001 0 1001 0 1001 0 1001 #> 908 TCGA-AQ-A7U7-01 1 584 0 584 0 584 0 584 #> 909 TCGA-AR-A0TP-01 0 4275 0 4275 0 4275 0 4275 #> 910 TCGA-AR-A0TQ-01 0 2991 0 2991 0 2991 0 2991 #> 911 TCGA-AR-A0TR-01 1 160 NA 160 0 160 0 160 #> 912 TCGA-AR-A0TS-01 0 2558 0 2558 0 2558 0 2558 #> 913 TCGA-AR-A0TT-01 0 3316 0 3316 0 3316 0 3316 #> 914 TCGA-AR-A0TU-01 0 709 0 709 0 709 0 709 #> 915 TCGA-AR-A0TV-01 0 2288 0 2288 0 2288 0 2288 #> 916 TCGA-AR-A0TW-01 0 3009 0 3009 1 739 1 739 #> 917 TCGA-AR-A0TX-01 0 1972 0 1972 0 1972 0 1972 #> 918 TCGA-AR-A0TY-01 1 1699 1 1699 1 544 1 544 #> 919 TCGA-AR-A0TZ-01 1 3262 NA 3262 1 1313 1 1313 #> 920 TCGA-AR-A0U0-01 0 1988 0 1988 0 1988 0 1988 #> 921 TCGA-AR-A0U2-01 1 2551 1 2551 1 1609 1 1609 #> 922 TCGA-AR-A0U3-01 0 4080 0 4080 0 4080 0 4080 #> 923 TCGA-AR-A0U4-01 0 3261 0 3261 0 3261 0 3261 #> 924 TCGA-AR-A1AH-01 0 3807 0 3807 0 3807 1 1136 #> 925 TCGA-AR-A1AI-01 0 3296 0 3296 1 588 1 588 #> 926 TCGA-AR-A1AJ-01 0 3072 0 3072 0 3072 0 3072 #> 927 TCGA-AR-A1AK-01 0 3159 0 3159 0 3159 0 3159 #> 928 TCGA-AR-A1AL-01 0 2971 0 2971 0 2971 0 2971 #> 929 TCGA-AR-A1AM-01 0 2991 0 2991 0 2991 0 2991 #> 930 TCGA-AR-A1AN-01 0 2920 0 2920 0 2920 0 2920 #> 931 TCGA-AR-A1AO-01 0 2618 0 2618 0 2618 0 2618 #> 932 TCGA-AR-A1AP-01 0 2856 0 2856 0 2856 0 2856 #> 933 TCGA-AR-A1AQ-01 0 3021 0 3021 0 3021 0 3021 #> 934 TCGA-AR-A1AR-01 1 524 1 524 1 268 1 268 #> 935 TCGA-AR-A1AS-01 0 1150 0 1150 0 1150 0 1150 #> 936 TCGA-AR-A1AT-01 1 1272 NA 1272 0 1272 0 1272 #> 937 TCGA-AR-A1AU-01 0 2868 0 2868 0 2868 0 2868 #> 938 TCGA-AR-A1AV-01 0 1864 0 1864 0 1864 0 1864 #> 939 TCGA-AR-A1AW-01 0 2632 0 2632 0 2632 0 2632 #> 940 TCGA-AR-A1AX-01 0 2629 0 2629 0 2629 0 2629 #> 941 TCGA-AR-A1AY-01 0 1026 0 1026 0 1026 0 1026 #> 942 TCGA-AR-A24H-01 0 4894 0 4894 0 4894 0 4894 #> 943 TCGA-AR-A24K-01 0 1548 0 1548 0 1548 0 1548 #> 944 TCGA-AR-A24L-01 1 2866 1 2866 1 1414 1 1414 #> 945 TCGA-AR-A24M-01 0 3660 0 3660 0 3660 0 3660 #> 946 TCGA-AR-A24N-01 0 3035 0 3035 0 3035 0 3035 #> 947 TCGA-AR-A24O-01 0 3607 0 3607 1 2561 1 2561 #> 948 TCGA-AR-A24P-01 0 84 0 84 0 84 0 84 #> 949 TCGA-AR-A24Q-01 0 3172 0 3172 0 3172 0 3172 #> 950 TCGA-AR-A24R-01 0 3430 0 3430 0 3430 0 3430 #> 951 TCGA-AR-A24S-01 0 2976 0 2976 0 2976 0 2976 #> 952 TCGA-AR-A24T-01 0 3202 0 3202 0 3202 0 3202 #> 953 TCGA-AR-A24U-01 0 3128 0 3128 0 3128 0 3128 #> 954 TCGA-AR-A24V-01 0 3203 0 3203 0 3203 0 3203 #> 955 TCGA-AR-A24W-01 0 1550 0 1550 0 1550 0 1550 #> 956 TCGA-AR-A24X-01 0 3004 0 3004 0 3004 0 3004 #> 957 TCGA-AR-A24Z-01 0 3001 0 3001 0 3001 0 3001 #> 958 TCGA-AR-A250-01 0 2707 0 2707 0 2707 0 2707 #> 959 TCGA-AR-A251-01 0 3030 0 3030 0 3030 0 3030 #> 960 TCGA-AR-A252-01 0 2838 0 2838 0 2838 0 2838 #> 961 TCGA-AR-A254-01 0 2605 0 2605 0 2605 0 2605 #> 962 TCGA-AR-A255-01 0 2161 0 2161 0 2161 0 2161 #> 963 TCGA-AR-A256-01 1 2854 NA 2854 1 1640 1 1640 #> 964 TCGA-AR-A2LE-01 0 5062 0 5062 0 5062 1 4203 #> 965 TCGA-AR-A2LH-01 1 616 NA 616 1 434 1 434 #> 966 TCGA-AR-A2LJ-01 0 2632 0 2632 0 2632 0 2632 #> 967 TCGA-AR-A2LK-01 1 1649 NA 1649 1 1304 1 1304 #> 968 TCGA-AR-A2LL-01 0 2012 0 2012 0 2012 0 2012 #> 969 TCGA-AR-A2LM-01 0 1935 0 1935 0 1935 0 1935 #> 970 TCGA-AR-A2LN-01 0 1161 0 1161 0 1161 0 1161 #> 971 TCGA-AR-A2LO-01 0 1198 0 1198 0 1198 0 1198 #> 972 TCGA-AR-A2LQ-01 0 1233 0 1233 0 1233 0 1233 #> 973 TCGA-AR-A2LR-01 0 1742 0 1742 0 1742 0 1742 #> 974 TCGA-AR-A5QM-01 0 2231 0 2231 NA NA 1 968 #> 975 TCGA-AR-A5QN-01 0 1013 0 1013 NA NA 0 1013 #> 976 TCGA-AR-A5QP-01 0 1185 0 1185 NA NA 0 1185 #> 977 TCGA-AR-A5QQ-01 1 322 1 322 NA NA 1 301 #> 978 TCGA-B6-A0I1-01 1 2361 0 2361 1 1120 1 1120 #> 979 TCGA-B6-A0I2-01 0 4361 0 4361 NA NA 0 4361 #> 980 TCGA-B6-A0I5-01 0 8556 0 8556 0 8556 0 8556 #> 981 TCGA-B6-A0I6-01 1 991 1 991 1 859 1 859 #> 982 TCGA-B6-A0I8-01 1 749 1 749 NA NA 1 746 #> 983 TCGA-B6-A0I9-01 1 362 1 362 NA NA 1 362 #> 984 TCGA-B6-A0IA-01 0 8391 0 8391 0 8391 0 8391 #> 985 TCGA-B6-A0IB-01 1 3941 1 3941 NA NA 1 2717 #> 986 TCGA-B6-A0IC-01 1 1542 0 1542 0 1542 0 1542 #> 987 TCGA-B6-A0IE-01 1 1993 1 1993 1 834 1 834 #> 988 TCGA-B6-A0IG-01 1 4456 1 4456 NA NA 1 4456 #> 989 TCGA-B6-A0IH-01 1 3418 NA 3418 0 3418 0 3418 #> 990 TCGA-B6-A0IJ-01 0 7106 0 7106 0 7106 0 7106 #> 991 TCGA-B6-A0IK-01 1 571 1 571 1 489 1 489 #> 992 TCGA-B6-A0IM-01 1 3873 0 3873 0 3873 0 3873 #> 993 TCGA-B6-A0IN-01 1 2573 1 2573 1 1412 1 1412 #> 994 TCGA-B6-A0IO-01 0 5042 0 5042 0 5042 0 5042 #> 995 TCGA-B6-A0IP-01 1 3926 0 3926 0 3926 0 3926 #> 996 TCGA-B6-A0IQ-01 0 4285 0 4285 0 4285 0 4285 #> 997 TCGA-B6-A0RE-01 0 7777 0 7777 0 7777 0 7777 #> 998 TCGA-B6-A0RG-01 0 2082 0 2082 0 2082 0 2082 #> 999 TCGA-B6-A0RH-01 1 6456 0 6456 1 2165 1 2165 #> 1000 TCGA-B6-A0RI-01 0 7126 0 7126 1 1100 1 1100 #> 1001 TCGA-B6-A0RL-01 1 2469 0 2469 0 2469 0 2469 #> 1002 TCGA-B6-A0RM-01 1 2373 0 2373 NA NA 0 2373 #> 1003 TCGA-B6-A0RN-01 0 8008 0 8008 0 8008 0 8008 #> 1004 TCGA-B6-A0RO-01 0 4929 0 4929 0 4929 0 4929 #> 1005 TCGA-B6-A0RP-01 1 3126 1 3126 1 2787 1 2787 #> 1006 TCGA-B6-A0RQ-01 1 4267 0 4267 0 4267 0 4267 #> 1007 TCGA-B6-A0RS-01 1 3063 1 3063 1 2041 1 2041 #> 1008 TCGA-B6-A0RT-01 0 2721 0 2721 NA NA 0 2721 #> 1009 TCGA-B6-A0RU-01 0 8605 0 8605 1 3076 1 3076 #> 1010 TCGA-B6-A0RV-01 0 5156 0 5156 0 5156 0 5156 #> 1011 TCGA-B6-A0WS-01 1 2965 0 2965 NA NA 0 2965 #> 1012 TCGA-B6-A0WT-01 0 5739 0 5739 1 3862 1 3862 #> 1013 TCGA-B6-A0WV-01 1 2417 0 2417 0 2417 0 2417 #> 1014 TCGA-B6-A0WW-01 1 558 1 558 1 447 1 447 #> 1015 TCGA-B6-A0WX-01 1 639 1 639 1 563 1 563 #> 1016 TCGA-B6-A0WY-01 1 3461 1 3461 1 2011 1 2011 #> 1017 TCGA-B6-A0WZ-01 0 6292 0 6292 0 6292 1 5117 #> 1018 TCGA-B6-A0X0-01 1 3945 NA 3945 0 3945 0 3945 #> 1019 TCGA-B6-A0X1-01 1 7455 0 7455 1 490 1 490 #> 1020 TCGA-B6-A0X4-01 1 860 1 860 1 716 1 716 #> 1021 TCGA-B6-A0X5-01 1 2097 1 2097 1 1343 1 1343 #> 1022 TCGA-B6-A0X7-01 1 1781 0 1781 NA NA 1 1104 #> 1023 TCGA-B6-A1KC-01 0 1326 0 1326 0 1326 0 1326 #> 1024 TCGA-B6-A1KF-01 0 3088 0 3088 0 3088 0 3088 #> 1025 TCGA-B6-A1KI-01 0 2236 0 2236 0 2236 0 2236 #> 1026 TCGA-B6-A1KN-01 0 4233 0 4233 0 4233 0 4233 #> 1027 TCGA-B6-A2IU-01 0 5176 0 5176 0 5176 1 4224 #> 1028 TCGA-B6-A3ZX-01 1 1152 1 1152 NA NA 1 994 #> 1029 TCGA-B6-A400-01 0 215 0 215 0 215 0 215 #> 1030 TCGA-B6-A401-01 0 2596 0 2596 0 2596 0 2596 #> 1031 TCGA-B6-A402-01 0 2281 0 2281 1 1516 1 1516 #> 1032 TCGA-B6-A408-01 0 2072 0 2072 0 2072 0 2072 #> 1033 TCGA-B6-A409-01 1 573 1 573 1 456 1 456 #> 1034 TCGA-B6-A40B-01 0 3152 0 3152 0 3152 0 3152 #> 1035 TCGA-B6-A40C-01 0 2164 0 2164 0 2164 0 2164 #> 1036 TCGA-BH-A0AU-01 0 1914 0 1914 0 1914 0 1914 #> 1037 TCGA-BH-A0AU-11 0 1914 0 1914 0 1914 0 1914 #> 1038 TCGA-BH-A0AV-01 0 1820 0 1820 0 1820 0 1820 #> 1039 TCGA-BH-A0AW-01 0 622 0 622 0 622 0 622 #> 1040 TCGA-BH-A0AY-11 0 777 0 777 0 777 0 777 #> 1041 TCGA-BH-A0AZ-01 0 1919 0 1919 0 1919 0 1919 #> 1042 TCGA-BH-A0AZ-11 0 1919 0 1919 0 1919 0 1919 #> 1043 TCGA-BH-A0B0-01 0 2477 0 2477 0 2477 0 2477 #> 1044 TCGA-BH-A0B1-01 0 1148 0 1148 0 1148 0 1148 #> 1045 TCGA-BH-A0B3-01 0 1203 0 1203 0 1203 0 1203 #> 1046 TCGA-BH-A0B3-11 0 1203 0 1203 0 1203 0 1203 #> 1047 TCGA-BH-A0B4-01 0 1191 0 1191 0 1191 0 1191 #> 1048 TCGA-BH-A0B5-01 0 2136 0 2136 NA NA 0 2136 #> 1049 TCGA-BH-A0B5-11 0 2136 0 2136 NA NA 0 2136 #> 1050 TCGA-BH-A0B6-01 0 2483 0 2483 0 2483 0 2483 #> 1051 TCGA-BH-A0B7-01 0 2559 0 2559 0 2559 0 2559 #> 1052 TCGA-BH-A0B7-11 0 2559 0 2559 0 2559 0 2559 #> 1053 TCGA-BH-A0B8-01 0 1569 0 1569 0 1569 0 1569 #> 1054 TCGA-BH-A0B8-11 0 1569 0 1569 0 1569 0 1569 #> 1055 TCGA-BH-A0B9-01 0 1572 0 1572 0 1572 0 1572 #> 1056 TCGA-BH-A0BA-01 0 1132 0 1132 0 1132 0 1132 #> 1057 TCGA-BH-A0BA-11 0 1132 0 1132 0 1132 0 1132 #> 1058 TCGA-BH-A0BC-01 0 974 0 974 0 974 0 974 #> 1059 TCGA-BH-A0BC-11 0 974 0 974 0 974 0 974 #> 1060 TCGA-BH-A0BD-01 0 554 0 554 0 554 0 554 #> 1061 TCGA-BH-A0BF-01 1 1324 0 1324 0 1324 0 1324 #> 1062 TCGA-BH-A0BG-01 0 1871 0 1871 0 1871 0 1871 #> 1063 TCGA-BH-A0BJ-01 0 660 0 660 0 660 0 660 #> 1064 TCGA-BH-A0BJ-11 0 660 0 660 0 660 0 660 #> 1065 TCGA-BH-A0BL-01 0 2278 0 2278 0 2278 0 2278 #> 1066 TCGA-BH-A0BM-01 0 1876 0 1876 0 1876 0 1876 #> 1067 TCGA-BH-A0BM-11 0 1876 0 1876 0 1876 0 1876 #> 1068 TCGA-BH-A0BO-01 0 2197 0 2197 0 2197 0 2197 #> 1069 TCGA-BH-A0BP-01 1 2296 0 2296 0 2296 0 2296 #> 1070 TCGA-BH-A0BQ-01 0 2255 0 2255 1 1709 1 1709 #> 1071 TCGA-BH-A0BQ-11 0 2255 0 2255 1 1709 1 1709 #> 1072 TCGA-BH-A0BR-01 0 2330 0 2330 0 2330 0 2330 #> 1073 TCGA-BH-A0BS-01 0 2612 0 2612 0 2612 0 2612 #> 1074 TCGA-BH-A0BS-11 0 2612 0 2612 0 2612 0 2612 #> 1075 TCGA-BH-A0BT-01 0 2365 0 2365 0 2365 0 2365 #> 1076 TCGA-BH-A0BT-11 0 2365 0 2365 0 2365 0 2365 #> 1077 TCGA-BH-A0BV-01 0 1519 0 1519 0 1519 0 1519 #> 1078 TCGA-BH-A0BV-11 0 1519 0 1519 0 1519 0 1519 #> 1079 TCGA-BH-A0BW-01 0 2371 0 2371 0 2371 0 2371 #> 1080 TCGA-BH-A0BW-11 0 2371 0 2371 0 2371 0 2371 #> 1081 TCGA-BH-A0BZ-01 0 2255 0 2255 0 2255 0 2255 #> 1082 TCGA-BH-A0BZ-11 0 2255 0 2255 0 2255 0 2255 #> 1083 TCGA-BH-A0C0-01 0 1270 0 1270 0 1270 0 1270 #> 1084 TCGA-BH-A0C0-11 0 1270 0 1270 0 1270 0 1270 #> 1085 TCGA-BH-A0C1-01 1 1411 1 1411 1 1123 1 1123 #> 1086 TCGA-BH-A0C3-01 0 2709 0 2709 1 2674 1 2674 #> 1087 TCGA-BH-A0C3-11 0 2709 0 2709 1 2674 1 2674 #> 1088 TCGA-BH-A0C7-01 0 2767 0 2767 0 2767 0 2767 #> 1089 TCGA-BH-A0DD-01 0 2486 0 2486 0 2486 0 2486 #> 1090 TCGA-BH-A0DD-11 0 2486 0 2486 0 2486 0 2486 #> 1091 TCGA-BH-A0DE-01 0 2372 0 2372 0 2372 0 2372 #> 1092 TCGA-BH-A0DG-01 0 2041 0 2041 0 2041 0 2041 #> 1093 TCGA-BH-A0DG-11 0 2041 0 2041 0 2041 0 2041 #> 1094 TCGA-BH-A0DH-01 0 1156 0 1156 0 1156 0 1156 #> 1095 TCGA-BH-A0DH-11 0 1156 0 1156 0 1156 0 1156 #> 1096 TCGA-BH-A0DI-01 0 912 0 912 0 912 0 912 #> 1097 TCGA-BH-A0DK-01 0 423 0 423 0 423 0 423 #> 1098 TCGA-BH-A0DK-11 0 423 0 423 0 423 0 423 #> 1099 TCGA-BH-A0DL-01 0 2381 0 2381 0 2381 0 2381 #> 1100 TCGA-BH-A0DL-11 0 2381 0 2381 0 2381 0 2381 #> 1101 TCGA-BH-A0DO-01 0 1644 0 1644 0 1644 0 1644 #> 1102 TCGA-BH-A0DO-11 0 1644 0 1644 0 1644 0 1644 #> 1103 TCGA-BH-A0DP-01 0 476 0 476 0 476 0 476 #> 1104 TCGA-BH-A0DP-11 0 476 0 476 0 476 0 476 #> 1105 TCGA-BH-A0DQ-01 0 98 0 98 0 98 0 98 #> 1106 TCGA-BH-A0DQ-11 0 98 0 98 0 98 0 98 #> 1107 TCGA-BH-A0DS-01 0 78 0 78 0 78 0 78 #> 1108 TCGA-BH-A0DT-01 0 2403 0 2403 0 2403 0 2403 #> 1109 TCGA-BH-A0DT-11 0 2403 0 2403 0 2403 0 2403 #> 1110 TCGA-BH-A0DV-01 0 2064 0 2064 0 2064 0 2064 #> 1111 TCGA-BH-A0DV-11 0 2064 0 2064 0 2064 0 2064 #> 1112 TCGA-BH-A0DX-01 0 2156 0 2156 0 2156 0 2156 #> 1113 TCGA-BH-A0DZ-01 0 495 0 495 0 495 0 495 #> 1114 TCGA-BH-A0DZ-11 0 495 0 495 0 495 0 495 #> 1115 TCGA-BH-A0E0-01 0 134 0 134 0 134 0 134 #> 1116 TCGA-BH-A0E0-11 0 134 0 134 0 134 0 134 #> 1117 TCGA-BH-A0E1-01 0 477 0 477 0 477 0 477 #> 1118 TCGA-BH-A0E1-11 0 477 0 477 0 477 0 477 #> 1119 TCGA-BH-A0E2-01 0 435 0 435 0 435 0 435 #> 1120 TCGA-BH-A0E6-01 0 293 0 293 0 293 0 293 #> 1121 TCGA-BH-A0E7-01 0 1363 0 1363 0 1363 0 1363 #> 1122 TCGA-BH-A0E9-01 0 2489 0 2489 0 2489 0 2489 #> 1123 TCGA-BH-A0EA-01 1 991 0 991 0 991 0 991 #> 1124 TCGA-BH-A0EB-01 0 745 0 745 0 745 0 745 #> 1125 TCGA-BH-A0EE-01 0 943 0 943 0 943 0 943 #> 1126 TCGA-BH-A0EI-01 0 1926 0 1926 0 1926 0 1926 #> 1127 TCGA-BH-A0GY-01 0 923 0 923 0 923 0 923 #> 1128 TCGA-BH-A0GZ-01 0 328 0 328 0 328 0 328 #> 1129 TCGA-BH-A0H0-01 0 461 0 461 0 461 0 461 #> 1130 TCGA-BH-A0H3-01 0 1928 0 1928 0 1928 0 1928 #> 1131 TCGA-BH-A0H5-01 0 1620 0 1620 0 1620 0 1620 #> 1132 TCGA-BH-A0H5-11 0 1620 0 1620 0 1620 0 1620 #> 1133 TCGA-BH-A0H6-01 0 747 0 747 0 747 0 747 #> 1134 TCGA-BH-A0H7-01 0 702 0 702 0 702 0 702 #> 1135 TCGA-BH-A0H7-11 0 702 0 702 0 702 0 702 #> 1136 TCGA-BH-A0H9-01 0 1247 0 1247 0 1247 0 1247 #> 1137 TCGA-BH-A0H9-11 0 1247 0 1247 0 1247 0 1247 #> 1138 TCGA-BH-A0HA-01 0 1611 0 1611 0 1611 0 1611 #> 1139 TCGA-BH-A0HA-11 0 1611 0 1611 0 1611 0 1611 #> 1140 TCGA-BH-A0HB-01 0 806 0 806 0 806 0 806 #> 1141 TCGA-BH-A0HF-01 0 727 0 727 0 727 0 727 #> 1142 TCGA-BH-A0HI-01 0 620 0 620 0 620 0 620 #> 1143 TCGA-BH-A0HK-01 0 178 0 178 0 178 0 178 #> 1144 TCGA-BH-A0HK-11 0 178 0 178 0 178 0 178 #> 1145 TCGA-BH-A0HL-01 0 72 0 72 0 72 0 72 #> 1146 TCGA-BH-A0HN-01 0 516 0 516 0 516 0 516 #> 1147 TCGA-BH-A0HO-01 0 76 0 76 0 76 0 76 #> 1148 TCGA-BH-A0HP-01 0 414 0 414 0 414 0 414 #> 1149 TCGA-BH-A0HQ-01 0 1121 0 1121 0 1121 0 1121 #> 1150 TCGA-BH-A0HU-01 0 392 0 392 0 392 0 392 #> 1151 TCGA-BH-A0HW-01 0 1561 0 1561 0 1561 0 1561 #> 1152 TCGA-BH-A0HX-01 0 829 0 829 0 829 0 829 #> 1153 TCGA-BH-A0HY-01 0 1545 0 1545 0 1545 0 1545 #> 1154 TCGA-BH-A0RX-01 0 170 0 170 0 170 0 170 #> 1155 TCGA-BH-A0W3-01 0 728 0 728 NA NA 0 728 #> 1156 TCGA-BH-A0W4-01 0 759 0 759 NA NA 0 759 #> 1157 TCGA-BH-A0W5-01 0 1288 0 1288 0 1288 0 1288 #> 1158 TCGA-BH-A0W7-01 0 1363 0 1363 0 1363 0 1363 #> 1159 TCGA-BH-A0WA-01 0 701 0 701 0 701 0 701 #> 1160 TCGA-BH-A18F-01 0 1001 0 1001 0 1001 0 1001 #> 1161 TCGA-BH-A18G-01 0 149 0 149 0 149 0 149 #> 1162 TCGA-BH-A18H-01 0 652 0 652 0 652 0 652 #> 1163 TCGA-BH-A18I-01 0 1093 0 1093 0 1093 0 1093 #> 1164 TCGA-BH-A18J-01 1 612 1 612 NA NA 1 612 #> 1165 TCGA-BH-A18J-11 1 612 1 612 NA NA 1 612 #> 1166 TCGA-BH-A18K-01 1 2763 1 2763 NA NA 1 2763 #> 1167 TCGA-BH-A18K-11 1 2763 1 2763 NA NA 1 2763 #> 1168 TCGA-BH-A18L-01 1 811 NA 811 0 811 0 811 #> 1169 TCGA-BH-A18L-11 1 811 NA 811 0 811 0 811 #> 1170 TCGA-BH-A18M-01 1 2207 NA 2207 0 2207 0 2207 #> 1171 TCGA-BH-A18M-11 1 2207 NA 2207 0 2207 0 2207 #> 1172 TCGA-BH-A18N-01 1 1148 NA 1148 0 1148 0 1148 #> 1173 TCGA-BH-A18N-11 1 1148 NA 1148 0 1148 0 1148 #> 1174 TCGA-BH-A18P-01 1 921 1 921 NA NA 1 921 #> 1175 TCGA-BH-A18P-11 1 921 1 921 NA NA 1 921 #> 1176 TCGA-BH-A18Q-01 1 1692 NA 1692 0 1692 0 1692 #> 1177 TCGA-BH-A18Q-11 1 1692 NA 1692 0 1692 0 1692 #> 1178 TCGA-BH-A18R-01 1 1142 0 1142 0 1142 0 1142 #> 1179 TCGA-BH-A18R-11 1 1142 0 1142 0 1142 0 1142 #> 1180 TCGA-BH-A18S-01 1 2009 0 2009 0 2009 0 2009 #> 1181 TCGA-BH-A18S-11 1 2009 0 2009 0 2009 0 2009 #> 1182 TCGA-BH-A18T-01 1 224 1 224 NA NA 1 224 #> 1183 TCGA-BH-A18U-01 1 1563 0 1563 0 1563 0 1563 #> 1184 TCGA-BH-A18U-11 1 1563 0 1563 0 1563 0 1563 #> 1185 TCGA-BH-A18V-06 1 1556 NA 1556 0 1556 0 1556 #> 1186 TCGA-BH-A18V-01 1 1556 NA 1556 0 1556 0 1556 #> 1187 TCGA-BH-A18V-11 1 1556 NA 1556 0 1556 0 1556 #> 1188 TCGA-BH-A1EN-01 1 2127 0 2127 0 2127 0 2127 #> 1189 TCGA-BH-A1EN-11 1 2127 0 2127 0 2127 0 2127 #> 1190 TCGA-BH-A1EO-01 1 2798 0 2798 NA NA 0 2798 #> 1191 TCGA-BH-A1EO-11 1 2798 0 2798 NA NA 0 2798 #> 1192 TCGA-BH-A1ES-06 1 3462 1 3462 NA NA 1 3462 #> 1193 TCGA-BH-A1ES-01 1 3462 1 3462 NA NA 1 3462 #> 1194 TCGA-BH-A1ET-01 1 2520 0 2520 NA NA 0 2520 #> 1195 TCGA-BH-A1ET-11 1 2520 0 2520 NA NA 0 2520 #> 1196 TCGA-BH-A1EU-01 1 1286 0 1286 NA NA 0 1286 #> 1197 TCGA-BH-A1EU-11 1 1286 0 1286 NA NA 0 1286 #> 1198 TCGA-BH-A1EV-01 1 365 1 365 NA NA 1 365 #> 1199 TCGA-BH-A1EV-11 1 365 1 365 NA NA 1 365 #> 1200 TCGA-BH-A1EW-01 1 1694 1 1694 NA NA 1 1694 #> 1201 TCGA-BH-A1EW-11 1 1694 1 1694 NA NA 1 1694 #> 1202 TCGA-BH-A1EX-01 1 1508 1 1508 NA NA 1 1508 #> 1203 TCGA-BH-A1EY-01 1 538 1 538 NA NA 1 396 #> 1204 TCGA-BH-A1F0-01 1 785 1 785 NA NA 1 785 #> 1205 TCGA-BH-A1F0-11 1 785 1 785 NA NA 1 785 #> 1206 TCGA-BH-A1F2-01 1 959 0 959 NA NA 0 959 #> 1207 TCGA-BH-A1F2-11 1 959 0 959 NA NA 0 959 #> 1208 TCGA-BH-A1F5-01 1 2712 0 2712 NA NA 0 2712 #> 1209 TCGA-BH-A1F6-01 1 2965 NA 2965 NA NA 0 2965 #> 1210 TCGA-BH-A1F6-11 1 2965 NA 2965 NA NA 0 2965 #> 1211 TCGA-BH-A1F8-01 1 763 1 763 NA NA 1 763 #> 1212 TCGA-BH-A1F8-11 1 763 1 763 NA NA 1 763 #> 1213 TCGA-BH-A1FB-01 1 3669 1 3669 NA NA 1 3669 #> 1214 TCGA-BH-A1FB-11 1 3669 1 3669 NA NA 1 3669 #> 1215 TCGA-BH-A1FC-01 1 3472 0 3472 NA NA 0 3472 #> 1216 TCGA-BH-A1FC-11 1 3472 0 3472 NA NA 0 3472 #> 1217 TCGA-BH-A1FD-01 1 1009 1 1009 NA NA 1 1009 #> 1218 TCGA-BH-A1FD-11 1 1009 1 1009 NA NA 1 1009 #> 1219 TCGA-BH-A1FE-06 1 2273 1 2273 NA NA 1 2273 #> 1220 TCGA-BH-A1FE-01 1 2273 1 2273 NA NA 1 2273 #> 1221 TCGA-BH-A1FE-11 1 2273 1 2273 NA NA 1 2273 #> 1222 TCGA-BH-A1FG-01 1 3736 NA 3736 NA NA 0 3736 #> 1223 TCGA-BH-A1FG-11 1 3736 NA 3736 NA NA 0 3736 #> 1224 TCGA-BH-A1FH-01 1 1034 1 1034 NA NA 1 1034 #> 1225 TCGA-BH-A1FH-11 1 1034 1 1034 NA NA 1 1034 #> 1226 TCGA-BH-A1FJ-01 1 1927 NA 1927 NA NA 0 1927 #> 1227 TCGA-BH-A1FJ-11 1 1927 NA 1927 NA NA 0 1927 #> 1228 TCGA-BH-A1FL-01 1 1673 1 1673 NA NA 1 1673 #> 1229 TCGA-BH-A1FM-01 1 1388 NA 1388 NA NA 0 1388 #> 1230 TCGA-BH-A1FM-11 1 1388 NA 1388 NA NA 0 1388 #> 1231 TCGA-BH-A1FN-01 1 2192 1 2192 NA NA 1 2192 #> 1232 TCGA-BH-A1FN-11 1 2192 1 2192 NA NA 1 2192 #> 1233 TCGA-BH-A1FR-01 1 1642 1 1642 NA NA 1 1642 #> 1234 TCGA-BH-A1FR-11 1 1642 1 1642 NA NA 1 1642 #> 1235 TCGA-BH-A1FU-01 1 1688 1 1688 NA NA 1 1688 #> 1236 TCGA-BH-A1FU-11 1 1688 1 1688 NA NA 1 1688 #> 1237 TCGA-BH-A201-01 0 856 0 856 NA NA 0 856 #> 1238 TCGA-BH-A202-01 0 795 0 795 NA NA 0 795 #> 1239 TCGA-BH-A203-01 1 1174 1 1174 NA NA 1 1174 #> 1240 TCGA-BH-A203-11 1 1174 1 1174 NA NA 1 1174 #> 1241 TCGA-BH-A204-01 1 2534 NA 2534 NA NA 0 2534 #> 1242 TCGA-BH-A204-11 1 2534 NA 2534 NA NA 0 2534 #> 1243 TCGA-BH-A208-01 1 1759 0 1759 NA NA 0 1759 #> 1244 TCGA-BH-A208-11 1 1759 0 1759 NA NA 0 1759 #> 1245 TCGA-BH-A209-01 1 3959 0 3959 NA NA 0 3959 #> 1246 TCGA-BH-A209-11 1 3959 0 3959 NA NA 0 3959 #> 1247 TCGA-BH-A28O-01 0 1120 0 1120 0 1120 0 1120 #> 1248 TCGA-BH-A28Q-01 0 1119 0 1119 NA NA 0 1119 #> 1249 TCGA-BH-A2L8-01 0 612 0 612 0 612 0 612 #> 1250 TCGA-BH-A42T-01 1 320 0 320 0 320 0 320 #> 1251 TCGA-BH-A42U-01 0 3364 0 3364 0 3364 0 3364 #> 1252 TCGA-BH-A42V-01 0 635 0 635 0 635 0 635 #> 1253 TCGA-BH-A5IZ-01 0 567 0 567 0 567 0 567 #> 1254 TCGA-BH-A5J0-01 0 715 0 715 0 715 0 715 #> 1255 TCGA-BH-A6R8-01 0 293 0 293 0 293 0 293 #> 1256 TCGA-BH-A6R9-01 0 160 0 160 0 160 0 160 #> 1257 TCGA-BH-A8FY-01 1 295 0 295 0 295 0 295 #> 1258 TCGA-BH-A8FZ-01 0 574 0 574 0 574 0 574 #> 1259 TCGA-BH-A8G0-01 0 662 0 662 0 662 0 662 #> 1260 TCGA-BH-AB28-01 0 287 0 287 0 287 0 287 #> 1261 TCGA-C8-A12K-01 0 0 0 0 0 0 0 0 #> 1262 TCGA-C8-A12L-01 0 363 0 363 0 363 0 363 #> 1263 TCGA-C8-A12M-01 0 358 0 358 0 358 0 358 #> 1264 TCGA-C8-A12N-01 0 358 0 358 0 358 0 358 #> 1265 TCGA-C8-A12O-01 0 385 0 385 0 385 0 385 #> 1266 TCGA-C8-A12P-01 0 358 0 358 0 358 0 358 #> 1267 TCGA-C8-A12Q-01 1 385 1 385 NA NA 1 385 #> 1268 TCGA-C8-A12T-01 0 0 0 0 0 0 0 0 #> 1269 TCGA-C8-A12U-01 0 385 0 385 0 385 0 385 #> 1270 TCGA-C8-A12V-01 0 385 0 385 NA NA 0 385 #> 1271 TCGA-C8-A12W-01 0 385 0 385 0 385 0 385 #> 1272 TCGA-C8-A12X-01 0 385 0 385 0 385 0 385 #> 1273 TCGA-C8-A12Y-01 0 1476 0 1476 0 1476 0 1476 #> 1274 TCGA-C8-A12Z-01 0 382 0 382 0 382 0 382 #> 1275 TCGA-C8-A130-01 0 370 0 370 0 370 0 370 #> 1276 TCGA-C8-A131-01 0 411 0 411 0 411 0 411 #> 1277 TCGA-C8-A132-01 0 383 0 383 0 383 0 383 #> 1278 TCGA-C8-A133-01 0 0 0 0 0 0 0 0 #> 1279 TCGA-C8-A134-01 0 383 0 383 0 383 0 383 #> 1280 TCGA-C8-A135-01 0 393 0 393 0 393 0 393 #> 1281 TCGA-C8-A137-01 0 379 0 379 1 136 1 136 #> 1282 TCGA-C8-A138-01 0 380 0 380 0 380 0 380 #> 1283 TCGA-C8-A1HE-01 0 375 0 375 0 375 0 375 #> 1284 TCGA-C8-A1HG-01 0 345 0 345 0 345 0 345 #> 1285 TCGA-C8-A1HI-01 0 343 0 343 0 343 0 343 #> 1286 TCGA-C8-A1HJ-01 0 5 0 5 0 5 0 5 #> 1287 TCGA-C8-A1HK-01 0 366 0 366 0 366 0 366 #> 1288 TCGA-C8-A1HL-01 0 317 0 317 0 317 0 317 #> 1289 TCGA-C8-A1HM-01 0 375 0 375 0 375 0 375 #> 1290 TCGA-C8-A1HN-01 0 394 0 394 0 394 0 394 #> 1291 TCGA-C8-A1HO-01 0 375 0 375 0 375 0 375 #> 1292 TCGA-C8-A26V-01 0 616 0 616 0 616 0 616 #> 1293 TCGA-C8-A26W-01 0 381 0 381 0 381 0 381 #> 1294 TCGA-C8-A26X-01 0 376 0 376 0 376 0 376 #> 1295 TCGA-C8-A26Y-01 0 394 0 394 0 394 0 394 #> 1296 TCGA-C8-A26Z-01 0 470 0 470 0 470 0 470 #> 1297 TCGA-C8-A273-01 0 513 0 513 0 513 0 513 #> 1298 TCGA-C8-A274-01 0 508 0 508 0 508 0 508 #> 1299 TCGA-C8-A275-01 0 1 0 1 0 1 0 1 #> 1300 TCGA-C8-A278-01 0 297 0 297 0 297 0 297 #> 1301 TCGA-C8-A27A-01 0 747 0 747 0 747 0 747 #> 1302 TCGA-C8-A27B-01 0 439 0 439 0 439 0 439 #> 1303 TCGA-C8-A3M7-01 1 1034 1 1034 1 1034 1 1034 #> 1304 TCGA-C8-A3M8-01 0 394 0 394 0 394 0 394 #> 1305 TCGA-C8-A8HP-01 0 396 0 396 0 396 0 396 #> 1306 TCGA-C8-A8HQ-01 0 380 0 380 0 380 0 380 #> 1307 TCGA-C8-A8HR-01 0 408 0 408 0 408 0 408 #> 1308 TCGA-D8-A13Y-01 0 1728 0 1728 0 1728 0 1728 #> 1309 TCGA-D8-A13Z-01 0 635 0 635 0 635 0 635 #> 1310 TCGA-D8-A140-01 0 403 0 403 0 403 0 403 #> 1311 TCGA-D8-A141-01 0 626 0 626 0 626 0 626 #> 1312 TCGA-D8-A142-01 0 425 0 425 0 425 0 425 #> 1313 TCGA-D8-A143-01 0 431 0 431 0 431 0 431 #> 1314 TCGA-D8-A145-01 0 410 0 410 0 410 0 410 #> 1315 TCGA-D8-A146-01 0 643 0 643 0 643 0 643 #> 1316 TCGA-D8-A147-01 0 584 0 584 0 584 0 584 #> 1317 TCGA-D8-A1J8-01 0 431 0 431 0 431 0 431 #> 1318 TCGA-D8-A1J9-01 0 532 0 532 0 532 0 532 #> 1319 TCGA-D8-A1JA-01 0 502 0 502 1 431 1 431 #> 1320 TCGA-D8-A1JB-01 0 1688 0 1688 0 1688 0 1688 #> 1321 TCGA-D8-A1JC-01 0 480 0 480 0 480 0 480 #> 1322 TCGA-D8-A1JD-01 0 552 0 552 0 552 0 552 #> 1323 TCGA-D8-A1JE-01 0 575 0 575 0 575 0 575 #> 1324 TCGA-D8-A1JF-01 0 366 0 366 0 366 0 366 #> 1325 TCGA-D8-A1JG-01 0 1612 0 1612 0 1612 0 1612 #> 1326 TCGA-D8-A1JH-01 0 426 0 426 0 426 0 426 #> 1327 TCGA-D8-A1JI-01 0 577 0 577 0 577 0 577 #> 1328 TCGA-D8-A1JJ-01 0 611 0 611 0 611 0 611 #> 1329 TCGA-D8-A1JK-01 0 612 0 612 0 612 0 612 #> 1330 TCGA-D8-A1JL-01 0 611 0 611 0 611 0 611 #> 1331 TCGA-D8-A1JM-01 0 590 0 590 0 590 0 590 #> 1332 TCGA-D8-A1JN-01 0 620 0 620 0 620 0 620 #> 1333 TCGA-D8-A1JP-01 0 639 0 639 0 639 0 639 #> 1334 TCGA-D8-A1JS-01 0 371 0 371 0 371 0 371 #> 1335 TCGA-D8-A1JT-01 0 405 0 405 0 405 0 405 #> 1336 TCGA-D8-A1JU-01 0 447 0 447 0 447 0 447 #> 1337 TCGA-D8-A1X5-01 0 565 0 565 0 565 0 565 #> 1338 TCGA-D8-A1X6-01 0 541 0 541 0 541 0 541 #> 1339 TCGA-D8-A1X7-01 0 509 0 509 0 509 0 509 #> 1340 TCGA-D8-A1X8-01 0 783 0 783 0 783 0 783 #> 1341 TCGA-D8-A1X9-01 0 727 0 727 NA NA 0 727 #> 1342 TCGA-D8-A1XA-01 0 839 0 839 0 839 0 839 #> 1343 TCGA-D8-A1XB-01 0 552 0 552 0 552 0 552 #> 1344 TCGA-D8-A1XC-01 1 377 1 377 NA NA 1 377 #> 1345 TCGA-D8-A1XD-01 0 522 0 522 0 522 0 522 #> 1346 TCGA-D8-A1XF-01 0 463 0 463 NA NA 0 463 #> 1347 TCGA-D8-A1XG-01 0 448 0 448 0 448 0 448 #> 1348 TCGA-D8-A1XJ-01 0 664 0 664 0 664 0 664 #> 1349 TCGA-D8-A1XK-01 0 441 0 441 0 441 0 441 #> 1350 TCGA-D8-A1XL-01 0 606 0 606 0 606 0 606 #> 1351 TCGA-D8-A1XM-01 0 538 0 538 0 538 0 538 #> 1352 TCGA-D8-A1XO-01 0 1682 0 1682 0 1682 0 1682 #> 1353 TCGA-D8-A1XQ-01 0 499 0 499 0 499 0 499 #> 1354 TCGA-D8-A1XR-01 0 482 0 482 0 482 0 482 #> 1355 TCGA-D8-A1XS-01 0 496 0 496 0 496 0 496 #> 1356 TCGA-D8-A1XT-01 0 506 0 506 0 506 0 506 #> 1357 TCGA-D8-A1XU-01 0 395 0 395 0 395 0 395 #> 1358 TCGA-D8-A1XV-01 0 461 0 461 0 461 0 461 #> 1359 TCGA-D8-A1XW-01 0 1309 0 1309 0 1309 0 1309 #> 1360 TCGA-D8-A1XY-01 0 503 0 503 NA NA 0 503 #> 1361 TCGA-D8-A1XZ-01 0 466 0 466 0 466 0 466 #> 1362 TCGA-D8-A1Y0-01 0 472 0 472 NA NA 0 472 #> 1363 TCGA-D8-A1Y1-01 1 302 1 302 NA NA 1 302 #> 1364 TCGA-D8-A1Y2-01 0 433 0 433 0 433 0 433 #> 1365 TCGA-D8-A1Y3-01 0 430 0 430 0 430 0 430 #> 1366 TCGA-D8-A27E-01 0 530 0 530 0 530 0 530 #> 1367 TCGA-D8-A27F-01 0 488 0 488 0 488 0 488 #> 1368 TCGA-D8-A27G-01 0 409 0 409 0 409 0 409 #> 1369 TCGA-D8-A27H-01 0 397 0 397 0 397 0 397 #> 1370 TCGA-D8-A27I-01 0 439 0 439 0 439 0 439 #> 1371 TCGA-D8-A27K-01 0 1461 0 1461 0 1461 0 1461 #> 1372 TCGA-D8-A27L-01 0 499 0 499 0 499 0 499 #> 1373 TCGA-D8-A27M-01 0 410 0 410 0 410 0 410 #> 1374 TCGA-D8-A27N-01 0 519 0 519 0 519 0 519 #> 1375 TCGA-D8-A27P-01 0 49 0 49 0 49 0 49 #> 1376 TCGA-D8-A27R-01 0 307 0 307 0 307 0 307 #> 1377 TCGA-D8-A27T-01 0 398 0 398 0 398 0 398 #> 1378 TCGA-D8-A27V-01 0 381 0 381 0 381 0 381 #> 1379 TCGA-D8-A27W-01 0 373 0 373 0 373 0 373 #> 1380 TCGA-D8-A3Z5-01 0 1015 0 1015 0 1015 0 1015 #> 1381 TCGA-D8-A3Z6-01 0 563 0 563 0 563 0 563 #> 1382 TCGA-D8-A4Z1-01 0 659 0 659 0 659 0 659 #> 1383 TCGA-D8-A73U-01 0 492 0 492 0 492 0 492 #> 1384 TCGA-D8-A73W-01 1 385 1 385 1 21 1 21 #> 1385 TCGA-D8-A73X-01 0 767 0 767 0 767 0 767 #> 1386 TCGA-E2-A105-01 0 1308 0 1308 0 1308 0 1308 #> 1387 TCGA-E2-A106-01 0 2541 0 2541 0 2541 0 2541 #> 1388 TCGA-E2-A107-01 0 1047 0 1047 0 1047 0 1047 #> 1389 TCGA-E2-A109-01 0 1417 0 1417 0 1417 0 1417 #> 1390 TCGA-E2-A10A-01 0 1229 0 1229 1 75 1 75 #> 1391 TCGA-E2-A10B-01 0 1141 0 1141 NA NA 1 195 #> 1392 TCGA-E2-A10C-01 0 1220 0 1220 0 1220 0 1220 #> 1393 TCGA-E2-A10E-01 0 865 0 865 0 865 0 865 #> 1394 TCGA-E2-A10F-01 0 878 0 878 0 878 0 878 #> 1395 TCGA-E2-A14N-01 0 1434 0 1434 0 1434 0 1434 #> 1396 TCGA-E2-A14O-01 0 1359 0 1359 0 1359 0 1359 #> 1397 TCGA-E2-A14P-01 0 1246 0 1246 0 1246 0 1246 #> 1398 TCGA-E2-A14Q-01 0 1163 0 1163 0 1163 0 1163 #> 1399 TCGA-E2-A14R-01 0 1174 0 1174 0 1174 1 971 #> 1400 TCGA-E2-A14S-01 0 1009 0 1009 0 1009 0 1009 #> 1401 TCGA-E2-A14T-01 0 2311 0 2311 0 2311 0 2311 #> 1402 TCGA-E2-A14U-01 0 1318 0 1318 0 1318 0 1318 #> 1403 TCGA-E2-A14V-01 0 1042 0 1042 0 1042 0 1042 #> 1404 TCGA-E2-A14W-01 0 974 0 974 0 974 0 974 #> 1405 TCGA-E2-A14X-01 0 972 0 972 0 972 0 972 #> 1406 TCGA-E2-A14Y-01 0 2109 0 2109 0 2109 0 2109 #> 1407 TCGA-E2-A14Z-01 1 563 1 563 1 188 1 188 #> 1408 TCGA-E2-A150-01 0 1935 0 1935 0 1935 0 1935 #> 1409 TCGA-E2-A152-01 0 2128 0 2128 1 54 1 54 #> 1410 TCGA-E2-A153-01 0 707 0 707 0 707 0 707 #> 1411 TCGA-E2-A153-11 0 707 0 707 0 707 0 707 #> 1412 TCGA-E2-A154-01 0 591 0 591 0 591 0 591 #> 1413 TCGA-E2-A155-01 0 640 0 640 0 640 0 640 #> 1414 TCGA-E2-A156-01 0 726 0 726 0 726 0 726 #> 1415 TCGA-E2-A158-01 0 450 0 450 0 450 0 450 #> 1416 TCGA-E2-A158-11 0 450 0 450 0 450 0 450 #> 1417 TCGA-E2-A159-01 0 762 0 762 0 762 0 762 #> 1418 TCGA-E2-A15A-06 0 710 0 710 0 710 0 710 #> 1419 TCGA-E2-A15A-01 0 710 0 710 0 710 0 710 #> 1420 TCGA-E2-A15C-01 0 694 0 694 0 694 0 694 #> 1421 TCGA-E2-A15D-01 0 526 0 526 0 526 0 526 #> 1422 TCGA-E2-A15E-06 0 630 0 630 0 630 0 630 #> 1423 TCGA-E2-A15E-01 0 630 0 630 0 630 0 630 #> 1424 TCGA-E2-A15F-01 0 658 0 658 0 658 0 658 #> 1425 TCGA-E2-A15G-01 0 554 0 554 0 554 0 554 #> 1426 TCGA-E2-A15H-01 0 393 0 393 0 393 0 393 #> 1427 TCGA-E2-A15I-01 0 1692 0 1692 0 1692 0 1692 #> 1428 TCGA-E2-A15I-11 0 1692 0 1692 0 1692 0 1692 #> 1429 TCGA-E2-A15J-01 0 1640 0 1640 0 1640 0 1640 #> 1430 TCGA-E2-A15K-06 0 275 0 275 0 275 0 275 #> 1431 TCGA-E2-A15K-01 0 275 0 275 0 275 0 275 #> 1432 TCGA-E2-A15K-11 0 275 0 275 0 275 0 275 #> 1433 TCGA-E2-A15L-01 0 626 0 626 0 626 0 626 #> 1434 TCGA-E2-A15M-01 1 336 0 336 0 336 0 336 #> 1435 TCGA-E2-A15M-11 1 336 0 336 0 336 0 336 #> 1436 TCGA-E2-A15O-01 0 1545 0 1545 1 1210 1 1210 #> 1437 TCGA-E2-A15P-01 0 595 0 595 0 595 0 595 #> 1438 TCGA-E2-A15R-01 0 1732 0 1732 0 1732 0 1732 #> 1439 TCGA-E2-A15S-01 0 428 0 428 0 428 0 428 #> 1440 TCGA-E2-A15T-01 0 1563 0 1563 0 1563 0 1563 #> 1441 TCGA-E2-A1AZ-01 0 2329 0 2329 0 2329 0 2329 #> 1442 TCGA-E2-A1B0-01 0 1631 0 1631 0 1631 0 1631 #> 1443 TCGA-E2-A1B1-01 0 2653 0 2653 0 2653 0 2653 #> 1444 TCGA-E2-A1B4-01 1 1004 0 1004 0 1004 0 1004 #> 1445 TCGA-E2-A1B5-01 0 984 0 984 0 984 0 984 #> 1446 TCGA-E2-A1B6-01 0 867 0 867 0 867 0 867 #> 1447 TCGA-E2-A1BC-01 0 501 0 501 NA NA 0 501 #> 1448 TCGA-E2-A1BC-11 0 501 0 501 NA NA 0 501 #> 1449 TCGA-E2-A1BD-01 0 1133 0 1133 0 1133 0 1133 #> 1450 TCGA-E2-A1IE-01 0 2362 0 2362 1 1810 1 1810 #> 1451 TCGA-E2-A1IF-01 0 1138 0 1138 0 1138 0 1138 #> 1452 TCGA-E2-A1IG-01 0 2140 0 2140 0 2140 0 2140 #> 1453 TCGA-E2-A1IG-11 0 2140 0 2140 0 2140 0 2140 #> 1454 TCGA-E2-A1IH-01 0 1026 0 1026 0 1026 0 1026 #> 1455 TCGA-E2-A1II-01 0 1025 0 1025 0 1025 0 1025 #> 1456 TCGA-E2-A1IJ-01 0 865 0 865 0 865 0 865 #> 1457 TCGA-E2-A1IK-01 0 1800 0 1800 0 1800 0 1800 #> 1458 TCGA-E2-A1IL-01 0 118 0 118 0 118 0 118 #> 1459 TCGA-E2-A1IN-01 0 675 0 675 0 675 0 675 #> 1460 TCGA-E2-A1IO-01 0 1855 0 1855 0 1855 0 1855 #> 1461 TCGA-E2-A1IU-01 0 337 0 337 0 337 0 337 #> 1462 TCGA-E2-A1L6-01 0 1648 0 1648 0 1648 0 1648 #> 1463 TCGA-E2-A1L7-01 0 1836 0 1836 1 1619 1 1619 #> 1464 TCGA-E2-A1L7-11 0 1836 0 1836 1 1619 1 1619 #> 1465 TCGA-E2-A1L8-01 0 2240 0 2240 0 2240 0 2240 #> 1466 TCGA-E2-A1L9-01 0 598 0 598 0 598 0 598 #> 1467 TCGA-E2-A1LA-01 0 748 0 748 0 748 0 748 #> 1468 TCGA-E2-A1LB-01 0 2306 0 2306 0 2306 0 2306 #> 1469 TCGA-E2-A1LB-11 0 2306 0 2306 0 2306 0 2306 #> 1470 TCGA-E2-A1LE-01 1 879 1 879 1 361 1 361 #> 1471 TCGA-E2-A1LG-01 0 1523 0 1523 0 1523 0 1523 #> 1472 TCGA-E2-A1LH-01 0 3247 0 3247 0 3247 0 3247 #> 1473 TCGA-E2-A1LH-11 0 3247 0 3247 0 3247 0 3247 #> 1474 TCGA-E2-A1LI-01 0 3121 0 3121 NA NA 0 3121 #> 1475 TCGA-E2-A1LK-01 1 266 1 266 1 155 1 155 #> 1476 TCGA-E2-A1LL-01 0 1309 0 1309 1 1303 1 1303 #> 1477 TCGA-E2-A1LS-01 0 1604 0 1604 0 1604 0 1604 #> 1478 TCGA-E2-A1LS-11 0 1604 0 1604 0 1604 0 1604 #> 1479 TCGA-E2-A2P5-01 1 821 1 821 1 597 1 597 #> 1480 TCGA-E2-A2P6-01 0 1051 0 1051 0 1051 0 1051 #> 1481 TCGA-E2-A3DX-01 0 1325 0 1325 NA NA 0 1325 #> 1482 TCGA-E2-A56Z-01 0 252 0 252 0 252 0 252 #> 1483 TCGA-E2-A570-01 0 931 0 931 0 931 0 931 #> 1484 TCGA-E2-A572-01 0 1208 0 1208 0 1208 0 1208 #> 1485 TCGA-E2-A573-01 0 1062 0 1062 0 1062 0 1062 #> 1486 TCGA-E2-A574-01 0 1179 0 1179 0 1179 0 1179 #> 1487 TCGA-E2-A576-01 0 1043 0 1043 0 1043 0 1043 #> 1488 TCGA-E2-A9RU-01 0 538 0 538 0 538 0 538 #> 1489 TCGA-E9-A1N3-01 0 1059 0 1059 0 1059 0 1059 #> 1490 TCGA-E9-A1N4-01 0 1000 0 1000 0 1000 0 1000 #> 1491 TCGA-E9-A1N4-11 0 1000 0 1000 0 1000 0 1000 #> 1492 TCGA-E9-A1N5-01 0 1120 0 1120 0 1120 0 1120 #> 1493 TCGA-E9-A1N5-11 0 1120 0 1120 0 1120 0 1120 #> 1494 TCGA-E9-A1N6-01 1 678 1 678 1 443 1 443 #> 1495 TCGA-E9-A1N6-11 1 678 1 678 1 443 1 443 #> 1496 TCGA-E9-A1N8-01 0 1039 0 1039 0 1039 0 1039 #> 1497 TCGA-E9-A1N9-01 0 1101 0 1101 0 1101 0 1101 #> 1498 TCGA-E9-A1N9-11 0 1101 0 1101 0 1101 0 1101 #> 1499 TCGA-E9-A1NA-01 0 1112 0 1112 0 1112 0 1112 #> 1500 TCGA-E9-A1NA-11 0 1112 0 1112 0 1112 0 1112 #> 1501 TCGA-E9-A1NC-01 0 1203 0 1203 0 1203 0 1203 #> 1502 TCGA-E9-A1ND-01 0 1266 0 1266 0 1266 0 1266 #> 1503 TCGA-E9-A1ND-11 0 1266 0 1266 0 1266 0 1266 #> 1504 TCGA-E9-A1NE-01 0 1088 0 1088 0 1088 0 1088 #> 1505 TCGA-E9-A1NF-01 1 1072 1 1072 1 90 1 90 #> 1506 TCGA-E9-A1NF-11 1 1072 1 1072 1 90 1 90 #> 1507 TCGA-E9-A1NG-01 1 786 0 786 0 786 0 786 #> 1508 TCGA-E9-A1NG-11 1 786 0 786 0 786 0 786 #> 1509 TCGA-E9-A1NH-01 0 576 0 576 0 576 0 576 #> 1510 TCGA-E9-A1NI-01 0 300 0 300 0 300 0 300 #> 1511 TCGA-E9-A1QZ-01 0 755 0 755 0 755 0 755 #> 1512 TCGA-E9-A1R0-01 0 860 0 860 NA NA 0 860 #> 1513 TCGA-E9-A1R2-01 0 1063 0 1063 NA NA 0 1063 #> 1514 TCGA-E9-A1R3-01 0 78 0 78 0 78 0 78 #> 1515 TCGA-E9-A1R4-01 0 186 0 186 0 186 0 186 #> 1516 TCGA-E9-A1R5-01 0 92 0 92 0 92 0 92 #> 1517 TCGA-E9-A1R6-01 0 339 0 339 0 339 0 339 #> 1518 TCGA-E9-A1R7-01 0 1467 0 1467 0 1467 0 1467 #> 1519 TCGA-E9-A1R7-11 0 1467 0 1467 0 1467 0 1467 #> 1520 TCGA-E9-A1RA-01 0 1369 0 1369 0 1369 0 1369 #> 1521 TCGA-E9-A1RB-01 1 976 0 976 0 976 0 976 #> 1522 TCGA-E9-A1RB-11 1 976 0 976 0 976 0 976 #> 1523 TCGA-E9-A1RC-01 0 1224 0 1224 0 1224 0 1224 #> 1524 TCGA-E9-A1RC-11 0 1224 0 1224 0 1224 0 1224 #> 1525 TCGA-E9-A1RD-01 0 34 0 34 0 34 0 34 #> 1526 TCGA-E9-A1RD-11 0 34 0 34 0 34 0 34 #> 1527 TCGA-E9-A1RE-01 0 1419 0 1419 0 1419 0 1419 #> 1528 TCGA-E9-A1RF-01 0 200 0 200 0 200 0 200 #> 1529 TCGA-E9-A1RF-11 0 200 0 200 0 200 0 200 #> 1530 TCGA-E9-A1RG-01 0 647 0 647 0 647 0 647 #> 1531 TCGA-E9-A1RH-01 0 1417 0 1417 0 1417 0 1417 #> 1532 TCGA-E9-A1RH-11 0 1417 0 1417 0 1417 0 1417 #> 1533 TCGA-E9-A1RI-01 0 1449 0 1449 0 1449 0 1449 #> 1534 TCGA-E9-A1RI-11 0 1449 0 1449 0 1449 0 1449 #> 1535 TCGA-E9-A226-01 1 1048 1 1048 1 790 1 790 #> 1536 TCGA-E9-A227-01 0 975 0 975 0 975 0 975 #> 1537 TCGA-E9-A228-01 0 1285 0 1285 0 1285 0 1285 #> 1538 TCGA-E9-A229-01 0 1148 0 1148 0 1148 0 1148 #> 1539 TCGA-E9-A22A-01 0 1189 0 1189 0 1189 0 1189 #> 1540 TCGA-E9-A22B-01 0 1167 0 1167 0 1167 0 1167 #> 1541 TCGA-E9-A22D-01 0 1248 0 1248 0 1248 0 1248 #> 1542 TCGA-E9-A22E-01 0 1269 0 1269 0 1269 0 1269 #> 1543 TCGA-E9-A22G-01 0 1239 0 1239 0 1239 0 1239 #> 1544 TCGA-E9-A22H-01 0 1232 0 1232 0 1232 0 1232 #> 1545 TCGA-E9-A243-01 0 612 0 612 1 305 1 305 #> 1546 TCGA-E9-A244-01 0 21 0 21 0 21 0 21 #> 1547 TCGA-E9-A245-01 0 26 0 26 0 26 0 26 #> 1548 TCGA-E9-A247-01 0 1186 0 1186 0 1186 0 1186 #> 1549 TCGA-E9-A248-01 0 59 0 59 0 59 0 59 #> 1550 TCGA-E9-A249-01 0 217 0 217 0 217 0 217 #> 1551 TCGA-E9-A24A-01 0 747 0 747 0 747 0 747 #> 1552 TCGA-E9-A295-01 0 375 0 375 0 375 0 375 #> 1553 TCGA-E9-A2JS-01 1 904 1 904 1 524 1 524 #> 1554 TCGA-E9-A2JT-01 0 288 0 288 0 288 0 288 #> 1555 TCGA-E9-A3HO-01 0 1158 0 1158 0 1158 0 1158 #> 1556 TCGA-E9-A3Q9-01 0 1001 0 1001 0 1001 0 1001 #> 1557 TCGA-E9-A3QA-01 0 918 0 918 0 918 0 918 #> 1558 TCGA-E9-A3X8-01 0 926 0 926 0 926 0 926 #> 1559 TCGA-E9-A54X-01 0 727 0 727 0 727 0 727 #> 1560 TCGA-E9-A54Y-01 0 725 0 725 0 725 0 725 #> 1561 TCGA-E9-A5FK-01 0 812 0 812 0 812 0 812 #> 1562 TCGA-E9-A5FL-01 0 24 0 24 0 24 0 24 #> 1563 TCGA-E9-A5UO-01 0 785 0 785 0 785 0 785 #> 1564 TCGA-E9-A5UP-01 0 803 0 803 0 803 0 803 #> 1565 TCGA-E9-A6HE-01 0 847 0 847 0 847 0 847 #> 1566 TCGA-EW-A1IW-01 0 371 0 371 0 371 0 371 #> 1567 TCGA-EW-A1IX-01 0 1208 0 1208 0 1208 0 1208 #> 1568 TCGA-EW-A1IY-01 0 258 0 258 0 258 0 258 #> 1569 TCGA-EW-A1IZ-01 0 554 0 554 0 554 0 554 #> 1570 TCGA-EW-A1J1-01 0 575 0 575 0 575 0 575 #> 1571 TCGA-EW-A1J2-01 0 403 0 403 0 403 0 403 #> 1572 TCGA-EW-A1J3-01 0 504 0 504 0 504 0 504 #> 1573 TCGA-EW-A1J5-01 0 477 0 477 0 477 0 477 #> 1574 TCGA-EW-A1J6-01 0 875 0 875 0 875 0 875 #> 1575 TCGA-EW-A1OV-01 0 789 0 789 0 789 0 789 #> 1576 TCGA-EW-A1OW-01 0 694 0 694 0 694 0 694 #> 1577 TCGA-EW-A1OX-01 0 911 0 911 0 911 0 911 #> 1578 TCGA-EW-A1OY-01 0 908 0 908 0 908 0 908 #> 1579 TCGA-EW-A1OZ-01 0 1229 0 1229 0 1229 0 1229 #> 1580 TCGA-EW-A1P0-01 0 1251 0 1251 1 1094 1 1094 #> 1581 TCGA-EW-A1P1-01 0 1210 0 1210 1 1014 1 1014 #> 1582 TCGA-EW-A1P3-01 0 1611 0 1611 0 1611 0 1611 #> 1583 TCGA-EW-A1P4-01 0 907 0 907 0 907 0 907 #> 1584 TCGA-EW-A1P5-01 0 703 0 703 0 703 0 703 #> 1585 TCGA-EW-A1P6-01 0 562 0 562 NA NA 0 562 #> 1586 TCGA-EW-A1P7-01 0 915 0 915 1 729 1 729 #> 1587 TCGA-EW-A1P8-01 1 239 1 239 1 207 1 207 #> 1588 TCGA-EW-A1PA-01 0 575 0 575 0 575 0 575 #> 1589 TCGA-EW-A1PB-01 0 608 0 608 0 608 0 608 #> 1590 TCGA-EW-A1PC-01 0 187 0 187 0 187 0 187 #> 1591 TCGA-EW-A1PD-01 0 424 0 424 0 424 0 424 #> 1592 TCGA-EW-A1PE-01 0 320 0 320 0 320 0 320 #> 1593 TCGA-EW-A1PF-01 0 439 0 439 0 439 0 439 #> 1594 TCGA-EW-A1PG-01 0 1051 0 1051 0 1051 0 1051 #> 1595 TCGA-EW-A1PH-01 0 607 0 607 0 607 0 607 #> 1596 TCGA-EW-A2FR-01 0 1673 0 1673 0 1673 0 1673 #> 1597 TCGA-EW-A2FS-01 0 1604 0 1604 0 1604 0 1604 #> 1598 TCGA-EW-A2FV-01 0 788 0 788 0 788 0 788 #> 1599 TCGA-EW-A2FW-01 0 672 0 672 0 672 0 672 #> 1600 TCGA-EW-A3E8-01 0 1035 0 1035 0 1035 0 1035 #> 1601 TCGA-EW-A3U0-01 0 532 0 532 0 532 0 532 #> 1602 TCGA-EW-A423-01 0 533 0 533 0 533 0 533 #> 1603 TCGA-EW-A424-01 0 715 0 715 0 715 0 715 #> 1604 TCGA-EW-A6S9-01 0 463 0 463 NA NA 0 463 #> 1605 TCGA-EW-A6SA-01 0 510 0 510 0 510 0 510 #> 1606 TCGA-EW-A6SB-01 0 760 0 760 0 760 0 760 #> 1607 TCGA-EW-A6SC-01 0 952 0 952 0 952 0 952 #> 1608 TCGA-EW-A6SD-01 0 1010 0 1010 0 1010 0 1010 #> 1609 TCGA-GI-A2C8-01 0 225 0 225 0 225 0 225 #> 1610 TCGA-GI-A2C8-11 0 225 0 225 0 225 0 225 #> 1611 TCGA-GI-A2C9-01 0 3342 0 3342 0 3342 0 3342 #> 1612 TCGA-GI-A2C9-11 0 3342 0 3342 0 3342 0 3342 #> 1613 TCGA-GM-A2D9-01 1 1812 1 1812 1 536 1 536 #> 1614 TCGA-GM-A2DA-01 1 6593 1 6593 1 3014 1 3014 #> 1615 TCGA-GM-A2DB-01 0 2406 0 2406 0 2406 0 2406 #> 1616 TCGA-GM-A2DC-01 0 2535 0 2535 0 2535 0 2535 #> 1617 TCGA-GM-A2DD-01 0 2282 0 2282 0 2282 0 2282 #> 1618 TCGA-GM-A2DF-01 0 2155 0 2155 0 2155 0 2155 #> 1619 TCGA-GM-A2DH-01 0 2193 0 2193 0 2193 0 2193 #> 1620 TCGA-GM-A2DI-01 0 2590 0 2590 0 2590 0 2590 #> 1621 TCGA-GM-A2DK-01 0 2645 0 2645 0 2645 0 2645 #> 1622 TCGA-GM-A2DL-01 0 3519 0 3519 0 3519 0 3519 #> 1623 TCGA-GM-A2DM-01 0 3226 0 3226 0 3226 0 3226 #> 1624 TCGA-GM-A2DN-01 0 3091 0 3091 0 3091 0 3091 #> 1625 TCGA-GM-A2DO-01 0 2596 0 2596 0 2596 0 2596 #> 1626 TCGA-GM-A3NW-01 0 3361 0 3361 0 3361 0 3361 #> 1627 TCGA-GM-A3NY-01 0 1162 0 1162 0 1162 0 1162 #> 1628 TCGA-GM-A3XG-01 0 1330 0 1330 0 1330 0 1330 #> 1629 TCGA-GM-A3XL-01 0 2108 0 2108 0 2108 0 2108 #> 1630 TCGA-GM-A3XN-01 0 2019 0 2019 0 2019 0 2019 #> 1631 TCGA-GM-A4E0-01 0 2191 0 2191 0 2191 0 2191 #> 1632 TCGA-GM-A5PV-01 0 412 0 412 0 412 0 412 #> 1633 TCGA-GM-A5PX-01 0 551 0 551 0 551 0 551 #> 1634 TCGA-HN-A2NL-01 0 79 0 79 0 79 0 79 #> 1635 TCGA-HN-A2OB-01 1 1900 1 1900 1 1543 1 1543 #> 1636 TCGA-JL-A3YW-01 0 360 0 360 0 360 0 360 #> 1637 TCGA-JL-A3YX-01 0 352 0 352 0 352 0 352 #> 1638 TCGA-LD-A66U-01 0 646 0 646 0 646 0 646 #> 1639 TCGA-LD-A74U-01 0 402 0 402 0 402 0 402 #> 1640 TCGA-LD-A7W5-01 0 216 0 216 NA NA 0 216 #> 1641 TCGA-LD-A7W6-01 0 404 0 404 0 404 0 404 #> 1642 TCGA-LD-A9QF-01 0 323 0 323 0 323 0 323 #> 1643 TCGA-LL-A440-01 0 759 0 759 0 759 0 759 #> 1644 TCGA-LL-A441-01 0 996 0 996 0 996 0 996 #> 1645 TCGA-LL-A442-01 0 889 0 889 0 889 0 889 #> 1646 TCGA-LL-A50Y-01 0 762 0 762 0 762 0 762 #> 1647 TCGA-LL-A5YL-01 0 519 0 519 0 519 0 519 #> 1648 TCGA-LL-A5YM-01 0 466 0 466 1 258 1 258 #> 1649 TCGA-LL-A5YN-01 0 447 0 447 0 447 0 447 #> 1650 TCGA-LL-A5YO-01 0 440 0 440 0 440 0 440 #> 1651 TCGA-LL-A5YP-01 0 450 0 450 0 450 0 450 #> 1652 TCGA-LL-A6FP-01 0 677 0 677 0 677 0 677 #> 1653 TCGA-LL-A6FQ-01 0 80 0 80 0 80 0 80 #> 1654 TCGA-LL-A6FR-01 0 489 0 489 0 489 0 489 #> 1655 TCGA-LL-A73Y-01 0 477 0 477 0 477 0 477 #> 1656 TCGA-LL-A73Z-01 1 227 1 227 NA NA 1 192 #> 1657 TCGA-LL-A740-01 0 441 0 441 0 441 0 441 #> 1658 TCGA-LL-A7SZ-01 0 594 0 594 0 594 0 594 #> 1659 TCGA-LL-A7T0-01 0 376 0 376 0 376 0 376 #> 1660 TCGA-LL-A8F5-01 0 596 0 596 0 596 0 596 #> 1661 TCGA-LL-A9Q3-01 0 532 0 532 0 532 0 532 #> 1662 TCGA-LQ-A4E4-01 0 849 0 849 NA NA 1 681 #> 1663 TCGA-MS-A51U-01 0 681 0 681 0 681 0 681 #> 1664 TCGA-OK-A5Q2-01 0 64 0 64 0 64 0 64 #> 1665 TCGA-OL-A5D6-01 1 1104 0 1104 0 1104 0 1104 #> 1666 TCGA-OL-A5D7-01 0 1780 0 1780 0 1780 0 1780 #> 1667 TCGA-OL-A5D8-01 0 973 0 973 NA NA 0 973 #> 1668 TCGA-OL-A5DA-01 0 1783 0 1783 0 1783 0 1783 #> 1669 TCGA-OL-A5RU-01 0 1219 0 1219 0 1219 0 1219 #> 1670 TCGA-OL-A5RV-01 0 1062 0 1062 0 1062 0 1062 #> 1671 TCGA-OL-A5RW-01 0 1106 0 1106 0 1106 0 1106 #> 1672 TCGA-OL-A5RX-01 0 878 0 878 0 878 0 878 #> 1673 TCGA-OL-A5RY-01 0 752 0 752 0 752 0 752 #> 1674 TCGA-OL-A5RZ-01 0 679 0 679 0 679 0 679 #> 1675 TCGA-OL-A5S0-01 0 620 0 620 0 620 0 620 #> 1676 TCGA-OL-A66H-01 0 NA 0 NA 0 NA 0 NA #> 1677 TCGA-OL-A66I-01 0 714 0 714 0 714 0 714 #> 1678 TCGA-OL-A66J-01 0 1996 0 1996 0 1996 0 1996 #> 1679 TCGA-OL-A66K-01 1 1275 0 1275 0 1275 0 1275 #> 1680 TCGA-OL-A66L-01 0 1301 0 1301 0 1301 0 1301 #> 1681 TCGA-OL-A66N-01 0 792 0 792 0 792 0 792 #> 1682 TCGA-OL-A66O-01 0 528 0 528 0 528 0 528 #> 1683 TCGA-OL-A66P-01 0 428 0 428 0 428 0 428 #> 1684 TCGA-OL-A6VO-01 0 858 0 858 0 858 0 858 #> 1685 TCGA-OL-A6VQ-01 0 600 0 600 0 600 0 600 #> 1686 TCGA-OL-A6VR-01 0 1220 0 1220 0 1220 0 1220 #> 1687 TCGA-OL-A97C-01 0 271 0 271 NA NA 1 275 #> 1688 TCGA-PE-A5DC-01 1 1430 0 1430 NA NA 0 1430 #> 1689 TCGA-PE-A5DD-01 0 1953 0 1953 0 1953 0 1953 #> 1690 TCGA-PE-A5DE-01 0 2645 0 2645 NA NA 0 2645 #> 1691 TCGA-PL-A8LV-01 0 0 0 0 NA NA 0 0 #> 1692 TCGA-PL-A8LX-01 0 5 0 5 NA NA 0 5 #> 1693 TCGA-PL-A8LY-01 0 8 0 8 NA NA 0 8 #> 1694 TCGA-PL-A8LZ-01 0 302 0 302 NA NA 0 302 #> 1695 TCGA-S3-A6ZF-01 0 572 0 572 0 572 0 572 #> 1696 TCGA-S3-A6ZG-01 0 562 0 562 0 562 0 562 #> 1697 TCGA-S3-A6ZH-01 0 641 0 641 0 641 0 641 #> 1698 TCGA-S3-AA0Z-01 0 629 0 629 0 629 0 629 #> 1699 TCGA-S3-AA10-01 0 586 0 586 0 586 0 586 #> 1700 TCGA-S3-AA11-01 0 421 0 421 0 421 0 421 #> 1701 TCGA-S3-AA12-01 0 574 0 574 0 574 0 574 #> 1702 TCGA-S3-AA14-01 0 529 0 529 0 529 0 529 #> 1703 TCGA-S3-AA15-01 0 525 0 525 0 525 0 525 #> 1704 TCGA-S3-AA17-01 0 424 0 424 0 424 0 424 #> 1705 TCGA-UL-AAZ6-01 0 518 0 518 NA NA 0 518 #> 1706 TCGA-UU-A93S-01 1 116 1 116 NA NA 1 116 #> 1707 TCGA-V7-A7HQ-01 0 2033 0 2033 0 2033 0 2033 #> 1708 TCGA-W8-A86G-01 0 347 0 347 0 347 0 347 #> 1709 TCGA-WT-AB41-01 0 1611 0 1611 0 1611 0 1611 #> 1710 TCGA-WT-AB44-01 0 883 0 883 0 883 0 883 #> 1711 TCGA-XX-A899-01 0 467 0 467 0 467 0 467 #> 1712 TCGA-XX-A89A-01 0 488 0 488 0 488 0 488 #> 1713 TCGA-Z7-A8R5-01 0 3287 0 3287 NA NA 1 181 #> 1714 TCGA-Z7-A8R6-01 0 3256 0 3256 0 3256 0 3256 #> 1715 TCGA-2W-A8YY-01 0 533 0 533 0 533 0 533 #> 1716 TCGA-4J-AA1J-01 0 542 0 542 0 542 0 542 #> 1717 TCGA-BI-A0VR-01 0 1505 0 1505 NA NA 0 1505 #> 1718 TCGA-BI-A0VS-01 0 1735 0 1735 0 1735 0 1735 #> 1719 TCGA-BI-A20A-01 0 720 0 720 0 720 0 720 #> 1720 TCGA-C5-A0TN-01 1 348 1 348 NA NA 1 62 #> 1721 TCGA-C5-A1BE-01 1 2094 1 2094 1 1674 1 1674 #> 1722 TCGA-C5-A1BF-01 1 570 1 570 1 93 1 93 #> 1723 TCGA-C5-A1BI-01 0 1112 0 1112 0 1112 0 1112 #> 1724 TCGA-C5-A1BJ-01 0 4385 0 4385 0 4385 0 4385 #> 1725 TCGA-C5-A1BK-01 0 5385 0 5385 0 5385 0 5385 #> 1726 TCGA-C5-A1BL-01 0 5271 0 5271 0 5271 0 5271 #> 1727 TCGA-C5-A1BM-01 1 2520 0 2520 0 2520 0 2520 #> 1728 TCGA-C5-A1BN-01 1 166 1 166 NA NA 1 166 #> 1729 TCGA-C5-A1BQ-01 1 604 1 604 NA NA 0 604 #> 1730 TCGA-C5-A1M5-01 1 2052 1 2052 1 693 1 693 #> 1731 TCGA-C5-A1M6-01 1 955 1 955 1 316 1 316 #> 1732 TCGA-C5-A1M7-01 0 1409 0 1409 0 1409 0 1409 #> 1733 TCGA-C5-A1M8-01 0 919 0 919 0 919 0 919 #> 1734 TCGA-C5-A1M9-01 1 1065 1 1065 1 555 1 555 #> 1735 TCGA-C5-A1ME-01 0 1756 0 1756 0 1756 0 1756 #> 1736 TCGA-C5-A1MF-01 0 1617 0 1617 0 1617 0 1617 #> 1737 TCGA-C5-A1MH-01 1 1186 1 1186 1 178 1 178 #> 1738 TCGA-C5-A1MI-01 1 1083 1 1083 1 805 1 805 #> 1739 TCGA-C5-A1MJ-01 1 14 0 14 NA NA 0 14 #> 1740 TCGA-C5-A1MK-01 1 74 1 74 NA NA 1 74 #> 1741 TCGA-C5-A1ML-01 1 636 1 636 NA NA 1 636 #> 1742 TCGA-C5-A1MN-01 1 1245 0 1245 0 1245 0 1245 #> 1743 TCGA-C5-A1MP-01 0 109 0 109 0 109 0 109 #> 1744 TCGA-C5-A1MQ-01 0 1031 0 1031 0 1031 0 1031 #> 1745 TCGA-C5-A2LS-01 0 1345 0 1345 0 1345 0 1345 #> 1746 TCGA-C5-A2LT-01 0 2226 0 2226 0 2226 0 2226 #> 1747 TCGA-C5-A2LV-01 0 2234 0 2234 0 2234 0 2234 #> 1748 TCGA-C5-A2LX-01 0 2526 0 2526 0 2526 0 2526 #> 1749 TCGA-C5-A2LY-01 0 2383 0 2383 0 2383 0 2383 #> 1750 TCGA-C5-A2LZ-01 1 3046 1 3046 1 2893 1 2893 #> 1751 TCGA-C5-A2M1-01 0 1169 0 1169 0 1169 0 1169 #> 1752 TCGA-C5-A2M2-01 1 1011 NA 1011 NA NA 0 1011 #> 1753 TCGA-C5-A3HD-01 0 1582 0 1582 0 1582 0 1582 #> 1754 TCGA-C5-A3HE-01 0 548 0 548 NA NA 1 252 #> 1755 TCGA-C5-A3HF-01 1 543 1 543 NA NA 1 450 #> 1756 TCGA-C5-A3HL-01 0 621 0 621 0 621 0 621 #> 1757 TCGA-C5-A7CG-01 0 6408 0 6408 NA NA 0 6408 #> 1758 TCGA-C5-A7CH-01 0 4694 0 4694 NA NA 0 4694 #> 1759 TCGA-C5-A7CJ-01 1 3097 0 3097 NA NA 0 3097 #> 1760 TCGA-C5-A7CK-01 1 4086 0 4086 NA NA 0 4086 #> 1761 TCGA-C5-A7CL-01 1 471 1 471 NA NA 1 471 #> 1762 TCGA-C5-A7CM-01 0 619 0 619 0 619 0 619 #> 1763 TCGA-C5-A7CO-01 0 4482 0 4482 0 4482 0 4482 #> 1764 TCGA-C5-A7UC-01 1 523 0 523 NA NA 0 523 #> 1765 TCGA-C5-A7UE-01 0 4738 0 4738 0 4738 0 4738 #> 1766 TCGA-C5-A7UH-01 0 3988 0 3988 NA NA 0 3988 #> 1767 TCGA-C5-A7UI-01 1 2888 0 2888 NA NA 0 2888 #> 1768 TCGA-C5-A7X3-01 1 284 0 284 NA NA 0 284 #> 1769 TCGA-C5-A7X5-01 1 414 1 414 NA NA 1 414 #> 1770 TCGA-C5-A7X8-01 0 83 0 83 NA NA 0 83 #> 1771 TCGA-C5-A7XC-01 0 1551 0 1551 NA NA 0 1551 #> 1772 TCGA-C5-A8XH-01 1 1394 0 1394 NA NA 0 1394 #> 1773 TCGA-C5-A8XI-01 0 254 0 254 NA NA 0 254 #> 1774 TCGA-C5-A8XJ-01 0 4467 0 4467 NA NA 0 4467 #> 1775 TCGA-C5-A8XK-01 0 3039 0 3039 NA NA 0 3039 #> 1776 TCGA-C5-A8YQ-01 1 715 1 715 NA NA 1 715 #> 1777 TCGA-C5-A8YR-01 1 837 NA 837 NA NA 1 272 #> 1778 TCGA-C5-A8YT-01 1 633 1 633 NA NA 1 633 #> 1779 TCGA-C5-A8ZZ-01 0 636 0 636 NA NA 0 636 #> 1780 TCGA-C5-A901-01 0 518 0 518 NA NA 0 518 #> 1781 TCGA-C5-A902-01 0 149 0 149 NA NA 0 149 #> 1782 TCGA-C5-A905-01 0 4879 0 4879 NA NA 0 4879 #> 1783 TCGA-C5-A907-01 0 448 0 448 NA NA 0 448 #> 1784 TCGA-DG-A2KH-01 0 34 0 34 NA NA 0 34 #> 1785 TCGA-DG-A2KJ-01 0 2893 0 2893 0 2893 0 2893 #> 1786 TCGA-DG-A2KK-01 0 2496 0 2496 0 2496 0 2496 #> 1787 TCGA-DG-A2KL-01 0 1367 0 1367 0 1367 0 1367 #> 1788 TCGA-DG-A2KM-01 0 1946 0 1946 0 1946 0 1946 #> 1789 TCGA-DR-A0ZL-01 0 2669 0 2669 0 2669 0 2669 #> 1790 TCGA-DR-A0ZM-01 0 1791 0 1791 0 1791 0 1791 #> 1791 TCGA-DS-A0VK-01 1 1118 1 1118 NA NA 1 209 #> 1792 TCGA-DS-A0VL-01 0 81 0 81 0 81 0 81 #> 1793 TCGA-DS-A0VM-01 0 3589 0 3589 1 868 1 868 #> 1794 TCGA-DS-A0VN-01 0 3609 0 3609 0 3609 0 3609 #> 1795 TCGA-DS-A1O9-01 1 266 1 266 NA NA 1 266 #> 1796 TCGA-DS-A1OA-01 1 879 1 879 NA NA 1 379 #> 1797 TCGA-DS-A1OB-01 1 861 1 861 1 652 1 652 #> 1798 TCGA-DS-A1OC-01 0 376 0 376 0 376 0 376 #> 1799 TCGA-DS-A1OD-01 0 3874 0 3874 0 3874 0 3874 #> 1800 TCGA-DS-A3LQ-01 0 699 0 699 0 699 0 699 #> 1801 TCGA-DS-A5RQ-01 0 512 0 512 0 512 0 512 #> 1802 TCGA-DS-A7WF-01 1 492 1 492 NA NA 1 321 #> 1803 TCGA-DS-A7WH-01 0 533 0 533 0 533 0 533 #> 1804 TCGA-DS-A7WI-01 1 252 1 252 1 206 1 206 #> 1805 TCGA-EA-A1QS-01 0 1203 0 1203 0 1203 0 1203 #> 1806 TCGA-EA-A1QT-01 0 1243 0 1243 0 1243 0 1243 #> 1807 TCGA-EA-A3HQ-01 0 1136 0 1136 0 1136 0 1136 #> 1808 TCGA-EA-A3HR-01 0 940 0 940 0 940 0 940 #> 1809 TCGA-EA-A3HS-01 0 959 0 959 0 959 0 959 #> 1810 TCGA-EA-A3HT-01 0 954 0 954 0 954 0 954 #> 1811 TCGA-EA-A3HU-01 0 1013 0 1013 0 1013 0 1013 #> 1812 TCGA-EA-A3QD-01 0 397 0 397 0 397 0 397 #> 1813 TCGA-EA-A3QE-01 0 761 0 761 0 761 0 761 #> 1814 TCGA-EA-A3Y4-01 0 1122 0 1122 0 1122 0 1122 #> 1815 TCGA-EA-A410-01 0 803 0 803 0 803 0 803 #> 1816 TCGA-EA-A411-01 0 747 0 747 0 747 0 747 #> 1817 TCGA-EA-A439-01 0 965 0 965 1 316 1 316 #> 1818 TCGA-EA-A43B-01 0 791 0 791 0 791 0 791 #> 1819 TCGA-EA-A44S-01 0 369 0 369 NA NA 0 369 #> 1820 TCGA-EA-A4BA-01 0 755 0 755 0 755 0 755 #> 1821 TCGA-EA-A50E-01 1 227 1 227 NA NA 1 208 #> 1822 TCGA-EA-A556-01 0 453 0 453 0 453 0 453 #> 1823 TCGA-EA-A5FO-01 0 815 0 815 0 815 0 815 #> 1824 TCGA-EA-A5O9-01 0 788 0 788 0 788 0 788 #> 1825 TCGA-EA-A5ZD-01 0 830 0 830 0 830 0 830 #> 1826 TCGA-EA-A5ZE-01 0 829 0 829 1 425 1 425 #> 1827 TCGA-EA-A5ZF-01 0 828 0 828 1 440 1 440 #> 1828 TCGA-EA-A6QX-01 0 730 0 730 0 730 0 730 #> 1829 TCGA-EA-A78R-01 0 410 0 410 0 410 0 410 #> 1830 TCGA-EA-A97N-01 0 11 0 11 0 11 0 11 #> 1831 TCGA-EK-A2GZ-01 0 383 0 383 NA NA 0 383 #> 1832 TCGA-EK-A2H0-01 0 1847 0 1847 0 1847 0 1847 #> 1833 TCGA-EK-A2H1-01 0 799 0 799 NA NA 0 799 #> 1834 TCGA-EK-A2IP-01 0 202 0 202 NA NA 0 202 #> 1835 TCGA-EK-A2IR-01 0 3442 0 3442 0 3442 0 3442 #> 1836 TCGA-EK-A2PG-01 0 46 0 46 NA NA 0 46 #> 1837 TCGA-EK-A2PI-01 0 586 0 586 NA NA 0 586 #> 1838 TCGA-EK-A2PK-01 0 12 0 12 NA NA 0 12 #> 1839 TCGA-EK-A2PL-01 0 13 0 13 NA NA 0 13 #> 1840 TCGA-EK-A2PM-01 0 18 0 18 NA NA 0 18 #> 1841 TCGA-EK-A2R7-01 0 27 0 27 NA NA 0 27 #> 1842 TCGA-EK-A2R8-01 0 44 0 44 NA NA 0 44 #> 1843 TCGA-EK-A2R9-01 0 4 0 4 NA NA 0 4 #> 1844 TCGA-EK-A2RA-01 0 1246 0 1246 NA NA 0 1246 #> 1845 TCGA-EK-A2RB-01 0 9 0 9 NA NA 0 9 #> 1846 TCGA-EK-A2RC-01 0 129 0 129 NA NA 0 129 #> 1847 TCGA-EK-A2RE-01 0 57 0 57 NA NA 0 57 #> 1848 TCGA-EK-A2RJ-01 0 53 0 53 NA NA 0 53 #> 1849 TCGA-EK-A2RK-01 0 13 0 13 NA NA 0 13 #> 1850 TCGA-EK-A2RL-01 1 1453 1 1453 NA NA 1 1143 #> 1851 TCGA-EK-A2RM-01 0 50 0 50 NA NA 0 50 #> 1852 TCGA-EK-A2RN-01 0 71 0 71 NA NA 0 71 #> 1853 TCGA-EK-A2RO-01 0 2 0 2 NA NA 0 2 #> 1854 TCGA-EK-A3GJ-01 0 3 0 3 NA NA 0 3 #> 1855 TCGA-EK-A3GK-01 0 15 0 15 NA NA 0 15 #> 1856 TCGA-EK-A3GM-01 0 0 0 0 NA NA 0 0 #> 1857 TCGA-EK-A3GN-01 0 27 0 27 NA NA 0 27 #> 1858 TCGA-EX-A1H5-01 0 619 0 619 0 619 0 619 #> 1859 TCGA-EX-A1H6-01 0 241 0 241 0 241 0 241 #> 1860 TCGA-EX-A3L1-01 0 463 0 463 0 463 0 463 #> 1861 TCGA-EX-A449-01 0 447 0 447 NA NA 0 447 #> 1862 TCGA-EX-A69L-01 0 602 0 602 0 602 0 602 #> 1863 TCGA-EX-A69M-01 1 253 0 253 0 253 1 77 #> 1864 TCGA-EX-A8YF-01 0 473 0 473 1 396 1 396 #> 1865 TCGA-FU-A23K-01 0 372 0 372 0 372 0 372 #> 1866 TCGA-FU-A23L-01 0 725 0 725 0 725 0 725 #> 1867 TCGA-FU-A2QG-01 0 579 0 579 0 579 0 579 #> 1868 TCGA-FU-A3EO-01 0 490 0 490 0 490 0 490 #> 1869 TCGA-FU-A3EO-11 0 490 0 490 0 490 0 490 #> 1870 TCGA-FU-A3HY-01 0 954 0 954 0 954 0 954 #> 1871 TCGA-FU-A3HZ-01 0 1103 0 1103 0 1103 0 1103 #> 1872 TCGA-FU-A3NI-01 1 638 0 638 NA NA 0 638 #> 1873 TCGA-FU-A3TQ-01 0 795 0 795 0 795 0 795 #> 1874 TCGA-FU-A3TX-01 0 45 0 45 NA NA 0 45 #> 1875 TCGA-FU-A3WB-01 0 491 0 491 0 491 0 491 #> 1876 TCGA-FU-A3YQ-01 0 861 0 861 0 861 0 861 #> 1877 TCGA-FU-A40J-01 0 426 0 426 0 426 0 426 #> 1878 TCGA-FU-A57G-01 0 1078 0 1078 0 1078 0 1078 #> 1879 TCGA-FU-A5XV-01 0 321 0 321 0 321 0 321 #> 1880 TCGA-FU-A770-01 0 34 0 34 NA NA 0 34 #> 1881 TCGA-GH-A9DA-01 0 540 0 540 0 540 0 540 #> 1882 TCGA-HG-A2PA-01 1 773 1 773 NA NA 1 773 #> 1883 TCGA-HM-A3JJ-01 1 659 1 659 1 385 1 385 #> 1884 TCGA-HM-A3JJ-11 1 659 1 659 1 385 1 385 #> 1885 TCGA-HM-A3JK-01 0 632 0 632 0 632 0 632 #> 1886 TCGA-HM-A4S6-01 0 454 0 454 0 454 0 454 #> 1887 TCGA-HM-A6W2-06 0 287 0 287 NA NA 0 287 #> 1888 TCGA-HM-A6W2-01 0 287 0 287 NA NA 0 287 #> 1889 TCGA-IR-A3L7-01 0 4483 0 4483 0 4483 0 4483 #> 1890 TCGA-IR-A3LA-01 0 4172 0 4172 0 4172 0 4172 #> 1891 TCGA-IR-A3LB-01 1 2032 1 2032 1 317 1 317 #> 1892 TCGA-IR-A3LC-01 0 3935 0 3935 0 3935 0 3935 #> 1893 TCGA-IR-A3LF-01 0 2949 0 2949 0 2949 0 2949 #> 1894 TCGA-IR-A3LH-01 0 2394 0 2394 0 2394 0 2394 #> 1895 TCGA-IR-A3LI-01 0 2493 0 2493 NA NA 0 2493 #> 1896 TCGA-IR-A3LK-01 1 908 1 908 1 574 1 574 #> 1897 TCGA-IR-A3LL-01 0 1106 0 1106 0 1106 0 1106 #> 1898 TCGA-JW-A5VG-01 0 834 0 834 0 834 0 834 #> 1899 TCGA-JW-A5VH-01 1 100 1 100 NA NA 1 94 #> 1900 TCGA-JW-A5VI-01 0 747 0 747 1 558 1 558 #> 1901 TCGA-JW-A5VJ-01 0 652 0 652 NA NA 1 267 #> 1902 TCGA-JW-A5VK-01 0 623 0 623 0 623 0 623 #> 1903 TCGA-JW-A5VL-01 0 474 0 474 0 474 0 474 #> 1904 TCGA-JW-A69B-01 0 863 0 863 0 863 0 863 #> 1905 TCGA-JW-A852-01 1 252 1 252 0 252 1 153 #> 1906 TCGA-JW-AAVH-01 0 552 0 552 0 552 0 552 #> 1907 TCGA-JX-A3PZ-01 1 642 1 642 1 491 1 491 #> 1908 TCGA-JX-A3Q0-01 0 6375 0 6375 0 6375 0 6375 #> 1909 TCGA-JX-A3Q8-01 0 1357 0 1357 0 1357 0 1357 #> 1910 TCGA-JX-A5QV-01 0 636 0 636 0 636 0 636 #> 1911 TCGA-LP-A4AU-01 0 343 0 343 NA NA 0 343 #> 1912 TCGA-LP-A4AV-01 0 0 0 0 NA NA 0 0 #> 1913 TCGA-LP-A4AW-01 0 27 0 27 NA NA 0 27 #> 1914 TCGA-LP-A4AX-01 0 380 0 380 0 380 0 380 #> 1915 TCGA-LP-A5U2-01 0 9 0 9 0 9 0 9 #> 1916 TCGA-LP-A5U3-01 0 25 0 25 0 25 0 25 #> 1917 TCGA-LP-A7HU-01 0 406 0 406 0 406 0 406 #> 1918 TCGA-MA-AA3W-01 0 685 0 685 0 685 0 685 #> 1919 TCGA-MA-AA3X-01 0 617 0 617 0 617 0 617 #> 1920 TCGA-MA-AA3Y-01 0 542 0 542 0 542 0 542 #> 1921 TCGA-MA-AA3Z-01 0 595 0 595 0 595 0 595 #> 1922 TCGA-MA-AA41-01 0 279 0 279 NA NA 0 279 #> 1923 TCGA-MA-AA42-01 0 259 0 259 0 259 0 259 #> 1924 TCGA-MA-AA43-01 0 346 0 346 0 346 0 346 #> 1925 TCGA-MU-A51Y-01 0 854 0 854 0 854 0 854 #> 1926 TCGA-MU-A5YI-01 0 1053 0 1053 NA NA 1 630 #> 1927 TCGA-MU-A8JM-01 0 607 0 607 0 607 0 607 #> 1928 TCGA-MY-A5BD-01 0 1667 0 1667 NA NA 0 1667 #> 1929 TCGA-MY-A5BE-01 0 1066 0 1066 0 1066 0 1066 #> 1930 TCGA-MY-A5BF-01 0 634 0 634 NA NA 0 634 #> 1931 TCGA-MY-A5BF-11 0 634 0 634 NA NA 0 634 #> 1932 TCGA-MY-A913-01 0 524 0 524 0 524 0 524 #> 1933 TCGA-PN-A8MA-01 0 90 0 90 NA NA 0 90 #> 1934 TCGA-Q1-A5R1-01 0 474 0 474 0 474 0 474 #> 1935 TCGA-Q1-A5R2-01 0 499 0 499 NA NA 0 499 #> 1936 TCGA-Q1-A5R3-01 0 485 0 485 0 485 0 485 #> 1937 TCGA-Q1-A6DT-01 1 275 1 275 NA NA 1 275 #> 1938 TCGA-Q1-A6DV-01 0 491 0 491 0 491 0 491 #> 1939 TCGA-Q1-A6DW-01 0 534 0 534 NA NA 0 534 #> 1940 TCGA-Q1-A73O-01 0 428 0 428 0 428 0 428 #> 1941 TCGA-Q1-A73P-01 0 483 0 483 0 483 0 483 #> 1942 TCGA-Q1-A73Q-01 0 284 0 284 NA NA 0 284 #> 1943 TCGA-Q1-A73R-01 0 567 0 567 0 567 0 567 #> 1944 TCGA-Q1-A73S-01 0 688 0 688 0 688 0 688 #> 1945 TCGA-R2-A69V-01 0 596 0 596 0 596 0 596 #> 1946 TCGA-RA-A741-01 0 444 0 444 0 444 0 444 #> 1947 TCGA-UC-A7PD-01 1 355 1 355 1 202 1 202 #> 1948 TCGA-UC-A7PF-01 1 2859 NA 2859 NA NA 0 2859 #> 1949 TCGA-UC-A7PG-06 1 370 1 370 NA NA 1 370 #> 1950 TCGA-UC-A7PG-01 1 370 1 370 NA NA 1 370 #> 1951 TCGA-UC-A7PI-01 0 2114 0 2114 1 778 1 778 #> 1952 TCGA-VS-A8EB-01 1 305 1 305 NA NA 1 305 #> 1953 TCGA-VS-A8EC-01 0 1415 0 1415 0 1415 0 1415 #> 1954 TCGA-VS-A8EG-01 0 1386 0 1386 0 1386 0 1386 #> 1955 TCGA-VS-A8EH-01 0 986 0 986 0 986 0 986 #> 1956 TCGA-VS-A8EI-01 0 729 0 729 0 729 0 729 #> 1957 TCGA-VS-A8EJ-01 1 607 1 607 NA NA 1 607 #> 1958 TCGA-VS-A8EK-01 1 829 1 829 NA NA 1 829 #> 1959 TCGA-VS-A8EL-01 0 1992 0 1992 0 1992 0 1992 #> 1960 TCGA-VS-A8Q8-01 1 978 1 978 NA NA 1 488 #> 1961 TCGA-VS-A8Q9-01 0 1630 0 1630 0 1630 0 1630 #> 1962 TCGA-VS-A8QA-01 0 1099 0 1099 0 1099 0 1099 #> 1963 TCGA-VS-A8QC-01 1 350 1 350 NA NA 1 263 #> 1964 TCGA-VS-A8QF-01 0 1800 0 1800 0 1800 0 1800 #> 1965 TCGA-VS-A8QH-01 1 1210 1 1210 NA NA 1 1210 #> 1966 TCGA-VS-A8QM-01 1 951 1 951 NA NA 1 951 #> 1967 TCGA-VS-A94W-01 0 1243 0 1243 0 1243 0 1243 #> 1968 TCGA-VS-A94X-01 1 506 1 506 NA NA 1 506 #> 1969 TCGA-VS-A94Y-01 1 144 1 144 NA NA 1 144 #> 1970 TCGA-VS-A94Z-01 0 1015 0 1015 0 1015 0 1015 #> 1971 TCGA-VS-A950-01 0 1221 0 1221 NA NA 0 1221 #> 1972 TCGA-VS-A952-01 0 1778 0 1778 0 1778 0 1778 #> 1973 TCGA-VS-A953-01 1 477 1 477 NA NA 1 477 #> 1974 TCGA-VS-A954-01 0 1714 0 1714 0 1714 0 1714 #> 1975 TCGA-VS-A957-01 0 1688 0 1688 0 1688 0 1688 #> 1976 TCGA-VS-A958-01 0 1525 0 1525 0 1525 0 1525 #> 1977 TCGA-VS-A959-01 0 1561 0 1561 0 1561 0 1561 #> 1978 TCGA-VS-A9U5-01 0 1535 0 1535 0 1535 0 1535 #> 1979 TCGA-VS-A9U6-01 0 1320 0 1320 NA NA 1 711 #> 1980 TCGA-VS-A9U7-01 0 1472 0 1472 0 1472 0 1472 #> 1981 TCGA-VS-A9UB-01 0 911 0 911 0 911 0 911 #> 1982 TCGA-VS-A9UC-01 0 825 0 825 NA NA 0 825 #> 1983 TCGA-VS-A9UD-01 0 739 0 739 0 739 0 739 #> 1984 TCGA-VS-A9UH-01 0 1427 0 1427 NA NA 0 1427 #> 1985 TCGA-VS-A9UI-01 1 1372 0 1372 0 1372 0 1372 #> 1986 TCGA-VS-A9UJ-01 1 52 1 52 NA NA 1 52 #> 1987 TCGA-VS-A9UL-01 1 442 1 442 NA NA 1 336 #> 1988 TCGA-VS-A9UM-01 1 829 0 829 NA NA 0 829 #> 1989 TCGA-VS-A9UO-01 0 1456 0 1456 0 1456 0 1456 #> 1990 TCGA-VS-A9UP-01 0 1444 0 1444 1 352 1 352 #> 1991 TCGA-VS-A9UQ-01 0 1263 0 1263 1 561 1 561 #> 1992 TCGA-VS-A9UR-01 0 793 0 793 1 675 1 675 #> 1993 TCGA-VS-A9UT-01 0 482 0 482 0 482 0 482 #> 1994 TCGA-VS-A9UU-01 0 442 0 442 0 442 0 442 #> 1995 TCGA-VS-A9UV-01 1 104 1 104 NA NA 1 104 #> 1996 TCGA-VS-A9UY-01 1 555 1 555 NA NA 1 412 #> 1997 TCGA-VS-A9UZ-01 0 2044 0 2044 0 2044 0 2044 #> 1998 TCGA-VS-A9V0-01 0 573 0 573 1 475 1 475 #> 1999 TCGA-VS-A9V1-01 1 157 1 157 NA NA 1 58 #> 2000 TCGA-VS-A9V2-01 0 555 0 555 0 555 0 555 #> 2001 TCGA-VS-A9V3-01 0 540 0 540 NA NA 1 456 #> 2002 TCGA-VS-A9V4-01 1 132 1 132 NA NA 1 100 #> 2003 TCGA-VS-A9V5-01 1 494 1 494 NA NA 1 494 #> 2004 TCGA-VS-AA62-01 1 469 1 469 NA NA 1 469 #> 2005 TCGA-WL-A834-01 0 791 0 791 NA NA 0 791 #> 2006 TCGA-XS-A8TJ-01 0 890 0 890 0 890 0 890 #> 2007 TCGA-ZJ-A8QO-01 0 0 0 0 NA NA 0 0 #> 2008 TCGA-ZJ-A8QQ-01 0 2056 0 2056 0 2056 0 2056 #> 2009 TCGA-ZJ-A8QR-01 1 582 NA 582 NA NA 0 582 #> 2010 TCGA-ZJ-AAX4-01 0 21 0 21 NA NA 0 21 #> 2011 TCGA-ZJ-AAX8-01 0 0 0 0 NA NA 0 0 #> 2012 TCGA-ZJ-AAXA-01 0 43 0 43 NA NA 0 43 #> 2013 TCGA-ZJ-AAXB-01 0 0 0 0 NA NA 0 0 #> 2014 TCGA-ZJ-AAXD-01 0 0 0 0 NA NA 0 0 #> 2015 TCGA-ZJ-AAXF-01 0 0 0 0 NA NA 0 0 #> 2016 TCGA-ZJ-AAXI-01 0 0 0 0 NA NA 0 0 #> 2017 TCGA-ZJ-AAXJ-01 0 0 0 0 NA NA 0 0 #> 2018 TCGA-ZJ-AAXN-01 0 0 0 0 NA NA 0 0 #> 2019 TCGA-ZJ-AAXT-01 0 0 0 0 NA NA 0 0 #> 2020 TCGA-ZJ-AAXU-01 0 5 0 5 NA NA 0 5 #> 2021 TCGA-ZJ-AB0H-01 0 0 0 0 NA NA 0 0 #> 2022 TCGA-ZJ-AB0I-01 0 0 0 0 NA NA 0 0 #> 2023 TCGA-ZX-AA5X-01 0 119 0 119 NA NA 0 119 #> 2024 TCGA-3X-AAV9-01 1 339 1 339 1 216 1 216 #> 2025 TCGA-3X-AAVA-01 1 445 1 445 1 264 1 264 #> 2026 TCGA-3X-AAVB-01 0 402 0 402 NA NA 0 402 #> 2027 TCGA-3X-AAVC-01 0 709 0 709 0 709 0 709 #> 2028 TCGA-3X-AAVE-01 0 650 0 650 0 650 0 650 #> 2029 TCGA-4G-AAZO-01 0 1177 0 1177 NA NA 1 424 #> 2030 TCGA-4G-AAZT-01 0 420 0 420 0 420 0 420 #> 2031 TCGA-W5-AA2G-01 0 1976 0 1976 0 1976 0 1976 #> 2032 TCGA-W5-AA2H-01 0 1077 0 1077 0 1077 0 1077 #> 2033 TCGA-W5-AA2I-01 1 1939 1 1939 0 1939 1 217 #> 2034 TCGA-W5-AA2I-11 1 1939 1 1939 0 1939 1 217 #> 2035 TCGA-W5-AA2O-01 1 640 1 640 1 215 1 215 #> 2036 TCGA-W5-AA2Q-01 0 50 0 50 0 50 0 50 #> 2037 TCGA-W5-AA2Q-11 0 50 0 50 0 50 0 50 #> 2038 TCGA-W5-AA2R-01 0 1542 0 1542 0 1542 0 1542 #> 2039 TCGA-W5-AA2R-11 0 1542 0 1542 0 1542 0 1542 #> 2040 TCGA-W5-AA2T-01 1 1220 1 1220 1 295 1 295 #> 2041 TCGA-W5-AA2U-01 1 627 1 627 0 627 1 95 #> 2042 TCGA-W5-AA2U-11 1 627 1 627 0 627 1 95 #> 2043 TCGA-W5-AA2W-01 1 924 1 924 NA NA 1 237 #> 2044 TCGA-W5-AA2X-01 1 271 NA 271 NA NA 0 271 #> 2045 TCGA-W5-AA2X-11 1 271 NA 271 NA NA 0 271 #> 2046 TCGA-W5-AA2Z-01 0 1614 0 1614 NA NA 0 1614 #> 2047 TCGA-W5-AA30-01 0 1153 0 1153 0 1153 0 1153 #> 2048 TCGA-W5-AA30-11 0 1153 0 1153 0 1153 0 1153 #> 2049 TCGA-W5-AA31-01 0 10 0 10 0 10 0 10 #> 2050 TCGA-W5-AA31-11 0 10 0 10 0 10 0 10 #> 2051 TCGA-W5-AA33-01 0 1449 0 1449 0 1449 0 1449 #> 2052 TCGA-W5-AA34-01 1 555 1 555 1 40 1 40 #> 2053 TCGA-W5-AA34-11 1 555 1 555 1 40 1 40 #> 2054 TCGA-W5-AA36-01 1 1402 1 1402 NA NA 1 362 #> 2055 TCGA-W5-AA38-01 0 1471 0 1471 1 377 1 377 #> 2056 TCGA-W5-AA39-01 1 170 1 170 NA NA 1 170 #> 2057 TCGA-W6-AA0S-01 0 808 0 808 1 549 1 549 #> 2058 TCGA-WD-A7RX-01 1 21 0 21 NA NA 0 21 #> 2059 TCGA-YR-A95A-01 1 26 1 26 NA NA 1 17 #> 2060 TCGA-ZD-A8I3-01 1 169 1 169 1 59 1 59 #> 2061 TCGA-ZH-A8Y1-01 1 385 1 385 NA NA 1 49 #> 2062 TCGA-ZH-A8Y2-01 1 701 1 701 1 198 1 198 #> 2063 TCGA-ZH-A8Y4-01 1 741 1 741 NA NA 1 281 #> 2064 TCGA-ZH-A8Y5-01 0 1229 0 1229 NA NA 1 242 #> 2065 TCGA-ZH-A8Y6-01 0 519 0 519 0 519 0 519 #> 2066 TCGA-ZH-A8Y8-01 0 602 0 602 0 602 0 602 #> 2067 TCGA-ZU-A8S4-01 1 98 1 98 1 72 1 72 #> 2068 TCGA-ZU-A8S4-11 1 98 1 98 1 72 1 72 #> 2069 TCGA-3L-AA1B-01 0 475 0 475 0 475 0 475 #> 2070 TCGA-4N-A93T-01 0 146 0 146 NA NA 0 146 #> 2071 TCGA-4T-AA8H-01 0 385 0 385 0 385 0 385 #> 2072 TCGA-5M-AAT4-01 1 49 1 49 NA NA 1 49 #> 2073 TCGA-5M-AAT6-01 1 290 1 290 NA NA 1 219 #> 2074 TCGA-5M-AATE-01 0 1200 0 1200 NA NA 1 810 #> 2075 TCGA-A6-2671-11 1 1331 1 1331 NA NA 1 535 #> 2076 TCGA-A6-2672-01 0 1419 0 1419 0 1419 0 1419 #> 2077 TCGA-A6-2674-01 0 1331 0 1331 NA NA 1 735 #> 2078 TCGA-A6-2675-01 0 1321 0 1321 0 1321 0 1321 #> 2079 TCGA-A6-2675-11 0 1321 0 1321 0 1321 0 1321 #> 2080 TCGA-A6-2677-01 1 740 0 740 NA NA 0 740 #> 2081 TCGA-A6-2678-11 0 1286 0 1286 0 1286 0 1286 #> 2082 TCGA-A6-2679-11 0 1366 0 1366 0 1366 0 1366 #> 2083 TCGA-A6-2680-11 0 1068 0 1068 0 1068 0 1068 #> 2084 TCGA-A6-2682-01 1 424 1 424 NA NA 1 381 #> 2085 TCGA-A6-2682-11 1 424 1 424 NA NA 1 381 #> 2086 TCGA-A6-2683-11 1 504 1 504 NA NA 1 300 #> 2087 TCGA-A6-2684-01 0 1127 0 1127 NA NA 1 976 #> 2088 TCGA-A6-2684-11 0 1127 0 1127 NA NA 1 976 #> 2089 TCGA-A6-2685-01 0 1133 0 1133 NA NA 1 948 #> 2090 TCGA-A6-2685-11 0 1133 0 1133 NA NA 1 948 #> 2091 TCGA-A6-2686-01 1 1126 0 1126 0 1126 0 1126 #> 2092 TCGA-A6-2686-11 1 1126 0 1126 0 1126 0 1126 #> 2093 TCGA-A6-3809-01 0 996 0 996 NA NA 0 996 #> 2094 TCGA-A6-3810-01 0 1111 0 1111 0 1111 0 1111 #> 2095 TCGA-A6-4105-01 1 442 0 442 NA NA 1 364 #> 2096 TCGA-A6-5656-01 0 1001 0 1001 0 1001 0 1001 #> 2097 TCGA-A6-5657-01 0 962 0 962 0 962 0 962 #> 2098 TCGA-A6-5659-01 0 926 0 926 0 926 0 926 #> 2099 TCGA-A6-5659-11 0 926 0 926 0 926 0 926 #> 2100 TCGA-A6-5660-01 0 888 0 888 0 888 0 888 #> 2101 TCGA-A6-5661-01 0 1020 0 1020 0 1020 0 1020 #> 2102 TCGA-A6-5662-01 0 718 0 718 NA NA 1 495 #> 2103 TCGA-A6-5662-11 0 718 0 718 NA NA 1 495 #> 2104 TCGA-A6-5664-01 0 672 0 672 NA NA 1 183 #> 2105 TCGA-A6-5665-01 0 671 0 671 NA NA 1 529 #> 2106 TCGA-A6-5665-11 0 671 0 671 NA NA 1 529 #> 2107 TCGA-A6-5666-01 0 995 0 995 1 509 1 509 #> 2108 TCGA-A6-5667-01 0 887 0 887 0 887 0 887 #> 2109 TCGA-A6-5667-11 0 887 0 887 0 887 0 887 #> 2110 TCGA-A6-6137-01 0 824 0 824 0 824 0 824 #> 2111 TCGA-A6-6138-01 0 685 0 685 NA NA 0 685 #> 2112 TCGA-A6-6140-01 0 734 0 734 0 734 0 734 #> 2113 TCGA-A6-6141-01 0 255 0 255 NA NA 0 255 #> 2114 TCGA-A6-6142-01 0 763 0 763 NA NA 1 654 #> 2115 TCGA-A6-6648-01 0 766 0 766 NA NA 1 686 #> 2116 TCGA-A6-6649-01 0 735 0 735 0 735 0 735 #> 2117 TCGA-A6-6650-01 0 627 0 627 NA NA 0 627 #> 2118 TCGA-A6-6651-01 0 662 0 662 NA NA 0 662 #> 2119 TCGA-A6-6652-01 0 751 0 751 NA NA 0 751 #> 2120 TCGA-A6-6653-01 0 742 0 742 0 742 0 742 #> 2121 TCGA-A6-6654-01 0 726 0 726 0 726 0 726 #> 2122 TCGA-A6-6780-01 0 612 0 612 0 612 0 612 #> 2123 TCGA-A6-6781-01 0 598 0 598 0 598 0 598 #> 2124 TCGA-A6-6782-01 0 617 0 617 0 617 0 617 #> 2125 TCGA-A6-A565-01 1 494 1 494 NA NA 1 301 #> 2126 TCGA-A6-A566-01 1 758 1 758 NA NA 1 257 #> 2127 TCGA-A6-A567-01 1 1881 1 1881 NA NA 1 612 #> 2128 TCGA-A6-A56B-01 1 1711 0 1711 1 1678 1 1678 #> 2129 TCGA-A6-A5ZU-01 0 293 0 293 0 293 0 293 #> 2130 TCGA-AA-3489-01 1 214 1 214 NA NA 1 214 #> 2131 TCGA-AA-3489-11 1 214 1 214 NA NA 1 214 #> 2132 TCGA-AA-3492-01 1 92 0 92 NA NA 0 92 #> 2133 TCGA-AA-3495-01 0 1127 0 1127 0 1127 0 1127 #> 2134 TCGA-AA-3496-01 0 31 0 31 NA NA 0 31 #> 2135 TCGA-AA-3496-11 0 31 0 31 NA NA 0 31 #> 2136 TCGA-AA-3502-01 0 1065 0 1065 0 1065 0 1065 #> 2137 TCGA-AA-3506-01 0 1765 0 1765 NA NA 0 1765 #> 2138 TCGA-AA-3509-01 0 1915 0 1915 0 1915 0 1915 #> 2139 TCGA-AA-3511-01 0 212 0 212 1 59 1 59 #> 2140 TCGA-AA-3511-11 0 212 0 212 1 59 1 59 #> 2141 TCGA-AA-3514-11 0 31 0 31 NA NA 0 31 #> 2142 TCGA-AA-3516-11 1 396 1 396 NA NA 1 396 #> 2143 TCGA-AA-3517-11 0 1186 0 1186 1 821 1 821 #> 2144 TCGA-AA-3518-11 0 31 0 31 NA NA 0 31 #> 2145 TCGA-AA-3520-11 0 731 0 731 NA NA 0 731 #> 2146 TCGA-AA-3522-11 0 1127 0 1127 0 1127 0 1127 #> 2147 TCGA-AA-3525-11 0 245 0 245 NA NA 0 245 #> 2148 TCGA-AA-3526-01 0 580 0 580 0 580 0 580 #> 2149 TCGA-AA-3527-11 0 0 0 0 NA NA 0 0 #> 2150 TCGA-AA-3531-11 0 1035 0 1035 0 1035 0 1035 #> 2151 TCGA-AA-3534-11 0 882 0 882 0 882 0 882 #> 2152 TCGA-AA-3655-01 0 1856 0 1856 0 1856 0 1856 #> 2153 TCGA-AA-3655-11 0 1856 0 1856 0 1856 0 1856 #> 2154 TCGA-AA-3660-01 0 2375 0 2375 0 2375 0 2375 #> 2155 TCGA-AA-3660-11 0 2375 0 2375 0 2375 0 2375 #> 2156 TCGA-AA-3662-01 0 184 0 184 NA NA 0 184 #> 2157 TCGA-AA-3662-11 0 184 0 184 NA NA 0 184 #> 2158 TCGA-AA-3663-01 0 212 0 212 0 212 0 212 #> 2159 TCGA-AA-3663-11 0 212 0 212 0 212 0 212 #> 2160 TCGA-AA-3675-01 0 1431 0 1431 0 1431 0 1431 #> 2161 TCGA-AA-3685-01 0 1127 0 1127 0 1127 0 1127 #> 2162 TCGA-AA-3697-01 0 2587 0 2587 NA NA 0 2587 #> 2163 TCGA-AA-3697-11 0 2587 0 2587 NA NA 0 2587 #> 2164 TCGA-AA-3712-01 0 0 0 0 NA NA 0 0 #> 2165 TCGA-AA-3712-11 0 0 0 0 NA NA 0 0 #> 2166 TCGA-AA-3713-01 0 579 0 579 NA NA 0 579 #> 2167 TCGA-AA-3713-11 0 579 0 579 NA NA 0 579 #> 2168 TCGA-AA-A01P-01 1 1158 1 1158 NA NA 1 762 #> 2169 TCGA-AA-A01X-01 0 791 0 791 NA NA 1 791 #> 2170 TCGA-AA-A01Z-01 0 1126 0 1126 NA NA 1 1126 #> 2171 TCGA-AA-A02K-01 1 426 1 426 NA NA 1 306 #> 2172 TCGA-AA-A02Y-01 0 1216 0 1216 0 1216 0 1216 #> 2173 TCGA-AD-5900-01 0 370 0 370 0 370 0 370 #> 2174 TCGA-AD-6548-01 0 650 0 650 0 650 0 650 #> 2175 TCGA-AD-6888-01 1 472 1 472 1 343 1 343 #> 2176 TCGA-AD-6889-01 1 2532 0 2532 1 1516 1 1516 #> 2177 TCGA-AD-6890-01 0 746 0 746 0 746 0 746 #> 2178 TCGA-AD-6895-01 0 763 0 763 0 763 0 763 #> 2179 TCGA-AD-6899-01 1 176 0 176 0 176 0 176 #> 2180 TCGA-AD-6901-01 1 682 1 682 1 468 1 468 #> 2181 TCGA-AD-6963-01 0 834 0 834 0 834 0 834 #> 2182 TCGA-AD-6964-01 1 331 1 331 NA NA 1 325 #> 2183 TCGA-AD-6965-01 0 805 0 805 1 648 1 648 #> 2184 TCGA-AD-A5EJ-01 0 0 0 0 NA NA 0 0 #> 2185 TCGA-AD-A5EK-01 0 500 0 500 0 500 0 500 #> 2186 TCGA-AM-5820-01 0 14 0 14 NA NA 0 14 #> 2187 TCGA-AM-5821-01 0 28 0 28 NA NA 0 28 #> 2188 TCGA-AU-3779-01 0 441 0 441 NA NA 0 441 #> 2189 TCGA-AU-6004-01 0 824 0 824 NA NA 0 824 #> 2190 TCGA-AY-5543-01 0 1004 0 1004 NA NA 0 1004 #> 2191 TCGA-AY-6196-01 0 6 0 6 NA NA 0 6 #> 2192 TCGA-AY-6197-01 0 652 0 652 0 652 0 652 #> 2193 TCGA-AY-6386-01 0 542 0 542 0 542 0 542 #> 2194 TCGA-AY-A54L-01 0 525 0 525 1 396 1 396 #> 2195 TCGA-AY-A69D-01 0 543 0 543 0 543 0 543 #> 2196 TCGA-AY-A71X-01 0 588 0 588 0 588 0 588 #> 2197 TCGA-AY-A8YK-01 0 573 0 573 NA NA 0 573 #> 2198 TCGA-AZ-4313-01 0 2310 0 2310 0 2310 0 2310 #> 2199 TCGA-AZ-4315-01 0 1776 0 1776 NA NA 0 1776 #> 2200 TCGA-AZ-4323-01 1 43 1 43 NA NA 1 43 #> 2201 TCGA-AZ-4614-01 1 172 1 172 NA NA 1 172 #> 2202 TCGA-AZ-4615-01 0 1002 0 1002 NA NA 1 688 #> 2203 TCGA-AZ-4616-01 1 156 1 156 NA NA 1 156 #> 2204 TCGA-AZ-4682-01 1 680 1 680 NA NA 1 680 #> 2205 TCGA-AZ-4684-01 0 1977 0 1977 NA NA 1 411 #> 2206 TCGA-AZ-5403-01 1 1910 1 1910 NA NA 1 304 #> 2207 TCGA-AZ-5407-01 0 2683 0 2683 0 2683 0 2683 #> 2208 TCGA-AZ-6598-01 1 1503 0 1503 0 1503 0 1503 #> 2209 TCGA-AZ-6598-11 1 1503 0 1503 0 1503 0 1503 #> 2210 TCGA-AZ-6599-01 1 206 0 206 0 206 0 206 #> 2211 TCGA-AZ-6599-11 1 206 0 206 0 206 0 206 #> 2212 TCGA-AZ-6600-01 1 368 1 368 NA NA 1 368 #> 2213 TCGA-AZ-6600-11 1 368 1 368 NA NA 1 368 #> 2214 TCGA-AZ-6601-01 1 3042 1 3042 NA NA 1 2270 #> 2215 TCGA-AZ-6601-11 1 3042 1 3042 NA NA 1 2270 #> 2216 TCGA-AZ-6603-01 1 899 0 899 0 899 0 899 #> 2217 TCGA-AZ-6603-11 1 899 0 899 0 899 0 899 #> 2218 TCGA-AZ-6605-01 1 159 0 159 NA NA 0 159 #> 2219 TCGA-AZ-6605-11 1 159 0 159 NA NA 0 159 #> 2220 TCGA-AZ-6606-01 1 357 1 357 NA NA 1 357 #> 2221 TCGA-AZ-6607-01 1 97 1 97 NA NA 1 97 #> 2222 TCGA-AZ-6608-01 1 59 NA 59 NA NA 0 59 #> 2223 TCGA-CA-5254-01 0 386 0 386 0 386 0 386 #> 2224 TCGA-CA-5255-01 0 376 0 376 0 376 0 376 #> 2225 TCGA-CA-5256-01 0 379 0 379 0 379 0 379 #> 2226 TCGA-CA-5796-01 0 377 0 377 0 377 0 377 #> 2227 TCGA-CA-5797-01 0 383 0 383 0 383 0 383 #> 2228 TCGA-CA-6715-01 0 383 0 383 0 383 0 383 #> 2229 TCGA-CA-6716-01 0 371 0 371 0 371 0 371 #> 2230 TCGA-CA-6717-01 0 388 0 388 0 388 0 388 #> 2231 TCGA-CA-6718-01 1 306 1 306 1 207 1 207 #> 2232 TCGA-CA-6719-01 0 435 0 435 NA NA 1 354 #> 2233 TCGA-CK-4947-01 0 534 0 534 NA NA 1 21 #> 2234 TCGA-CK-4948-01 0 4502 0 4502 0 4502 0 4502 #> 2235 TCGA-CK-4950-01 0 2599 0 2599 0 2599 0 2599 #> 2236 TCGA-CK-4951-01 1 2134 0 2134 NA NA 1 480 #> 2237 TCGA-CK-4952-01 0 475 0 475 NA NA 0 475 #> 2238 TCGA-CK-5912-01 1 1493 0 1493 0 1493 0 1493 #> 2239 TCGA-CK-5913-01 0 1561 0 1561 0 1561 0 1561 #> 2240 TCGA-CK-5914-01 0 669 0 669 NA NA 0 669 #> 2241 TCGA-CK-5915-01 0 0 0 0 NA NA 0 0 #> 2242 TCGA-CK-5916-01 1 643 1 643 NA NA 1 292 #> 2243 TCGA-CK-6746-01 0 0 0 0 NA NA 0 0 #> 2244 TCGA-CK-6747-01 0 2523 0 2523 0 2523 0 2523 #> 2245 TCGA-CK-6748-01 0 61 0 61 NA NA 0 61 #> 2246 TCGA-CK-6751-01 0 3780 0 3780 NA NA 0 3780 #> 2247 TCGA-CM-4743-01 0 701 0 701 0 701 0 701 #> 2248 TCGA-CM-4744-01 0 609 0 609 0 609 0 609 #> 2249 TCGA-CM-4747-01 0 761 0 761 NA NA 0 761 #> 2250 TCGA-CM-4751-01 0 822 0 822 0 822 0 822 #> 2251 TCGA-CM-5344-01 0 670 0 670 NA NA 0 670 #> 2252 TCGA-CM-5348-01 0 699 0 699 NA NA 0 699 #> 2253 TCGA-CM-5349-01 0 915 0 915 NA NA 0 915 #> 2254 TCGA-CM-5860-01 0 974 0 974 NA NA 0 974 #> 2255 TCGA-CM-5861-01 0 457 0 457 NA NA 1 335 #> 2256 TCGA-CM-5862-01 1 153 1 153 NA NA 1 31 #> 2257 TCGA-CM-5863-01 0 457 0 457 NA NA 0 457 #> 2258 TCGA-CM-5864-01 0 457 0 457 NA NA 0 457 #> 2259 TCGA-CM-5868-01 0 518 0 518 NA NA 0 518 #> 2260 TCGA-CM-6161-01 0 457 0 457 NA NA 0 457 #> 2261 TCGA-CM-6162-01 0 365 0 365 NA NA 0 365 #> 2262 TCGA-CM-6163-01 0 427 0 427 NA NA 0 427 #> 2263 TCGA-CM-6164-01 0 883 0 883 NA NA 0 883 #> 2264 TCGA-CM-6165-01 0 488 0 488 NA NA 0 488 #> 2265 TCGA-CM-6166-01 0 669 0 669 NA NA 0 669 #> 2266 TCGA-CM-6167-01 0 456 0 456 NA NA 0 456 #> 2267 TCGA-CM-6168-01 0 395 0 395 NA NA 0 395 #> 2268 TCGA-CM-6169-01 0 396 0 396 NA NA 0 396 #> 2269 TCGA-CM-6170-01 0 457 0 457 NA NA 0 457 #> 2270 TCGA-CM-6171-01 0 427 0 427 NA NA 0 427 #> 2271 TCGA-CM-6172-01 0 335 0 335 NA NA 0 335 #> 2272 TCGA-CM-6674-01 0 394 0 394 NA NA 0 394 #> 2273 TCGA-CM-6675-01 0 397 0 397 NA NA 1 337 #> 2274 TCGA-CM-6676-01 0 337 0 337 NA NA 0 337 #> 2275 TCGA-CM-6677-01 0 337 0 337 NA NA 0 337 #> 2276 TCGA-CM-6678-01 0 335 0 335 NA NA 1 0 #> 2277 TCGA-CM-6679-01 0 306 0 306 NA NA 0 306 #> 2278 TCGA-CM-6680-01 0 366 0 366 NA NA 0 366 #> 2279 TCGA-D5-5537-01 1 1381 1 1381 1 722 1 722 #> 2280 TCGA-D5-5538-01 1 1661 1 1661 NA NA 1 1007 #> 2281 TCGA-D5-5539-01 0 596 0 596 NA NA 1 579 #> 2282 TCGA-D5-5540-01 0 1706 0 1706 0 1706 0 1706 #> 2283 TCGA-D5-5541-01 0 1701 0 1701 0 1701 0 1701 #> 2284 TCGA-D5-6529-01 0 614 0 614 NA NA 1 386 #> 2285 TCGA-D5-6530-01 0 621 0 621 NA NA 0 621 #> 2286 TCGA-D5-6531-01 0 540 0 540 NA NA 0 540 #> 2287 TCGA-D5-6532-01 0 555 0 555 NA NA 0 555 #> 2288 TCGA-D5-6533-01 0 775 0 775 0 775 0 775 #> 2289 TCGA-D5-6534-01 0 1316 0 1316 0 1316 0 1316 #> 2290 TCGA-D5-6535-01 0 460 0 460 NA NA 0 460 #> 2291 TCGA-D5-6536-01 0 543 0 543 NA NA 1 493 #> 2292 TCGA-D5-6537-01 1 146 1 146 NA NA 1 123 #> 2293 TCGA-D5-6538-01 0 521 0 521 NA NA 0 521 #> 2294 TCGA-D5-6539-01 0 380 0 380 NA NA 0 380 #> 2295 TCGA-D5-6540-01 0 491 0 491 NA NA 0 491 #> 2296 TCGA-D5-6541-01 0 474 0 474 NA NA 0 474 #> 2297 TCGA-D5-6898-01 0 229 0 229 NA NA 0 229 #> 2298 TCGA-D5-6920-01 0 377 0 377 NA NA 0 377 #> 2299 TCGA-D5-6922-01 0 308 0 308 NA NA 0 308 #> 2300 TCGA-D5-6923-01 0 378 0 378 NA NA 0 378 #> 2301 TCGA-D5-6924-01 0 435 0 435 NA NA 0 435 #> 2302 TCGA-D5-6926-01 0 275 0 275 NA NA 0 275 #> 2303 TCGA-D5-6927-01 0 287 0 287 NA NA 0 287 #> 2304 TCGA-D5-6928-01 0 354 0 354 NA NA 0 354 #> 2305 TCGA-D5-6929-01 0 408 0 408 NA NA 0 408 #> 2306 TCGA-D5-6930-01 0 406 0 406 NA NA 0 406 #> 2307 TCGA-D5-6931-01 0 365 0 365 NA NA 0 365 #> 2308 TCGA-D5-6932-01 0 346 0 346 NA NA 0 346 #> 2309 TCGA-D5-7000-01 0 312 0 312 NA NA 0 312 #> 2310 TCGA-DM-A0X9-01 0 3641 0 3641 NA NA 0 3641 #> 2311 TCGA-DM-A0XD-01 1 743 NA 743 NA NA 1 484 #> 2312 TCGA-DM-A0XF-01 1 1162 NA 1162 NA NA 0 1162 #> 2313 TCGA-DM-A1D0-01 0 3974 0 3974 NA NA 0 3974 #> 2314 TCGA-DM-A1D4-01 1 2821 NA 2821 NA NA 1 1920 #> 2315 TCGA-DM-A1D7-01 1 405 NA 405 NA NA 1 80 #> 2316 TCGA-DM-A1D8-01 1 383 NA 383 NA NA 0 383 #> 2317 TCGA-DM-A1D9-01 0 4270 0 4270 NA NA 0 4270 #> 2318 TCGA-DM-A1DA-01 1 228 NA 228 NA NA 0 228 #> 2319 TCGA-DM-A1DB-01 1 1348 NA 1348 NA NA 0 1348 #> 2320 TCGA-DM-A1HA-01 0 4000 0 4000 NA NA 0 4000 #> 2321 TCGA-DM-A1HB-01 0 4126 0 4126 NA NA 0 4126 #> 2322 TCGA-DM-A280-01 1 236 NA 236 NA NA 0 236 #> 2323 TCGA-DM-A282-01 0 4233 0 4233 NA NA 0 4233 #> 2324 TCGA-DM-A285-01 1 179 NA 179 NA NA 0 179 #> 2325 TCGA-DM-A288-01 1 427 NA 427 NA NA 1 320 #> 2326 TCGA-DM-A28A-01 1 805 NA 805 NA NA 0 805 #> 2327 TCGA-DM-A28C-01 1 2475 NA 2475 NA NA 1 1929 #> 2328 TCGA-DM-A28E-01 0 3648 0 3648 NA NA 0 3648 #> 2329 TCGA-DM-A28F-01 1 1094 NA 1094 NA NA 0 1094 #> 2330 TCGA-DM-A28G-01 1 1849 NA 1849 NA NA 0 1849 #> 2331 TCGA-DM-A28H-01 0 3561 0 3561 NA NA 1 484 #> 2332 TCGA-DM-A28K-01 0 2988 0 2988 NA NA 0 2988 #> 2333 TCGA-DM-A28M-01 0 2895 0 2895 NA NA 0 2895 #> 2334 TCGA-F4-6459-01 1 262 0 262 NA NA 0 262 #> 2335 TCGA-F4-6460-01 1 972 1 972 1 313 1 313 #> 2336 TCGA-F4-6461-01 1 338 1 338 NA NA 1 288 #> 2337 TCGA-F4-6463-01 0 1087 0 1087 0 1087 0 1087 #> 2338 TCGA-F4-6569-01 0 1087 0 1087 0 1087 0 1087 #> 2339 TCGA-F4-6570-01 1 188 0 188 NA NA 0 188 #> 2340 TCGA-F4-6703-01 0 1456 0 1456 0 1456 0 1456 #> 2341 TCGA-F4-6704-01 0 47 0 47 NA NA 0 47 #> 2342 TCGA-F4-6704-11 0 47 0 47 NA NA 0 47 #> 2343 TCGA-F4-6805-01 0 1047 0 1047 0 1047 0 1047 #> 2344 TCGA-F4-6806-01 0 1260 0 1260 1 336 1 336 #> 2345 TCGA-F4-6807-01 0 1309 0 1309 0 1309 0 1309 #> 2346 TCGA-F4-6808-01 0 1024 0 1024 0 1024 0 1024 #> 2347 TCGA-F4-6809-01 1 403 1 403 NA NA 1 403 #> 2348 TCGA-F4-6854-01 0 16 0 16 0 16 0 16 #> 2349 TCGA-F4-6855-01 0 1442 0 1442 0 1442 0 1442 #> 2350 TCGA-F4-6856-01 0 1074 0 1074 0 1074 0 1074 #> 2351 TCGA-G4-6293-01 0 4051 0 4051 0 4051 0 4051 #> 2352 TCGA-G4-6294-01 1 858 1 858 NA NA 1 517 #> 2353 TCGA-G4-6295-01 0 254 0 254 NA NA 0 254 #> 2354 TCGA-G4-6297-01 0 2506 0 2506 NA NA 1 439 #> 2355 TCGA-G4-6298-01 1 715 1 715 NA NA 1 291 #> 2356 TCGA-G4-6299-01 0 2268 0 2268 NA NA 0 2268 #> 2357 TCGA-G4-6302-01 1 2047 0 2047 NA NA 0 2047 #> 2358 TCGA-G4-6303-01 1 2003 1 2003 NA NA 1 872 #> 2359 TCGA-G4-6304-01 0 1631 0 1631 NA NA 1 859 #> 2360 TCGA-G4-6306-01 0 1359 0 1359 NA NA 0 1359 #> 2361 TCGA-G4-6307-01 0 1674 0 1674 NA NA 0 1674 #> 2362 TCGA-G4-6309-01 0 2600 0 2600 1 2176 1 2176 #> 2363 TCGA-G4-6310-01 0 1935 0 1935 0 1935 0 1935 #> 2364 TCGA-G4-6311-01 0 1199 0 1199 NA NA 0 1199 #> 2365 TCGA-G4-6314-01 0 1093 0 1093 NA NA 1 38 #> 2366 TCGA-G4-6315-01 0 1883 0 1883 NA NA 0 1883 #> 2367 TCGA-G4-6317-02 0 1095 0 1095 NA NA 1 592 #> 2368 TCGA-G4-6317-01 0 1095 0 1095 NA NA 1 592 #> 2369 TCGA-G4-6320-01 0 804 0 804 NA NA 0 804 #> 2370 TCGA-G4-6321-01 0 672 0 672 NA NA 0 672 #> 2371 TCGA-G4-6322-01 0 792 0 792 NA NA 1 789 #> 2372 TCGA-G4-6586-01 0 1089 0 1089 NA NA 0 1089 #> 2373 TCGA-G4-6588-01 0 796 0 796 NA NA 0 796 #> 2374 TCGA-G4-6625-01 0 2792 0 2792 NA NA 1 2564 #> 2375 TCGA-G4-6626-01 1 1422 0 1422 NA NA 0 1422 #> 2376 TCGA-G4-6627-01 0 2275 0 2275 1 1003 1 1003 #> 2377 TCGA-G4-6628-01 0 2424 0 2424 0 2424 0 2424 #> 2378 TCGA-NH-A50T-01 0 553 0 553 0 553 0 553 #> 2379 TCGA-NH-A50U-01 1 334 1 334 NA NA 1 276 #> 2380 TCGA-NH-A50V-01 0 588 0 588 0 588 0 588 #> 2381 TCGA-NH-A5IV-01 0 588 0 588 0 588 0 588 #> 2382 TCGA-NH-A6GA-01 1 302 1 302 NA NA 1 6 #> 2383 TCGA-NH-A6GB-01 0 476 0 476 NA NA 0 476 #> 2384 TCGA-NH-A6GC-01 0 389 0 389 NA NA 0 389 #> 2385 TCGA-NH-A8F7-06 0 543 0 543 NA NA 0 543 #> 2386 TCGA-NH-A8F7-01 0 543 0 543 NA NA 0 543 #> 2387 TCGA-NH-A8F8-01 1 511 1 511 NA NA 1 511 #> 2388 TCGA-QG-A5YV-01 0 1301 0 1301 0 1301 0 1301 #> 2389 TCGA-QG-A5YW-01 0 896 0 896 0 896 0 896 #> 2390 TCGA-QG-A5YX-01 0 1003 0 1003 0 1003 0 1003 #> 2391 TCGA-QG-A5Z1-01 1 256 0 256 NA NA 0 256 #> 2392 TCGA-QG-A5Z2-01 0 952 0 952 0 952 0 952 #> 2393 TCGA-QL-A97D-01 0 666 0 666 0 666 0 666 #> 2394 TCGA-RU-A8FL-01 0 1177 0 1177 NA NA 1 256 #> 2395 TCGA-SS-A7HO-01 0 1829 0 1829 1 506 1 506 #> 2396 TCGA-T9-A92H-01 0 362 0 362 1 81 1 81 #> 2397 TCGA-WS-AB45-01 0 2130 0 2130 0 2130 0 2130 #> 2398 TCGA-FA-8693-01 0 132 0 132 0 132 0 132 #> 2399 TCGA-FA-A4BB-01 0 132 0 132 NA NA 0 132 #> 2400 TCGA-FA-A4XK-01 1 708 0 708 0 708 0 708 #> 2401 TCGA-FA-A6HN-01 1 58 0 58 NA NA 0 58 #> 2402 TCGA-FA-A6HO-01 0 749 0 749 1 739 1 739 #> 2403 TCGA-FA-A7DS-01 0 719 0 719 0 719 0 719 #> 2404 TCGA-FA-A7Q1-01 1 248 0 248 0 248 0 248 #> 2405 TCGA-FA-A82F-01 0 427 0 427 0 427 0 427 #> 2406 TCGA-FA-A86F-01 0 553 0 553 NA NA 1 150 #> 2407 TCGA-FF-8041-01 0 1081 0 1081 0 1081 0 1081 #> 2408 TCGA-FF-8042-01 0 946 0 946 0 946 0 946 #> 2409 TCGA-FF-8043-01 0 965 0 965 0 965 0 965 #> 2410 TCGA-FF-8046-01 0 751 0 751 0 751 0 751 #> 2411 TCGA-FF-8047-01 0 126 0 126 NA NA 1 24 #> 2412 TCGA-FF-8061-01 0 832 0 832 0 832 0 832 #> 2413 TCGA-FF-8062-01 0 679 0 679 0 679 0 679 #> 2414 TCGA-FF-A7CQ-01 0 298 0 298 NA NA 1 255 #> 2415 TCGA-FF-A7CR-01 1 313 1 313 NA NA 1 290 #> 2416 TCGA-FF-A7CW-01 0 791 0 791 0 791 0 791 #> 2417 TCGA-FF-A7CX-01 0 385 0 385 NA NA 0 385 #> 2418 TCGA-G8-6324-01 1 1252 1 1252 NA NA 1 338 #> 2419 TCGA-G8-6325-01 0 1581 0 1581 NA NA 0 1581 #> 2420 TCGA-G8-6326-01 0 2131 0 2131 NA NA 0 2131 #> 2421 TCGA-G8-6906-01 1 6425 0 6425 1 6383 1 6383 #> 2422 TCGA-G8-6907-01 1 595 1 595 NA NA 1 279 #> 2423 TCGA-G8-6909-01 1 3553 0 3553 0 3553 0 3553 #> 2424 TCGA-G8-6914-01 0 5980 0 5980 1 3669 1 3669 #> 2425 TCGA-GR-7351-01 0 4578 0 4578 0 4578 0 4578 #> 2426 TCGA-GR-7353-01 0 2983 0 2983 0 2983 0 2983 #> 2427 TCGA-GR-A4D4-01 0 1581 0 1581 NA NA 0 1581 #> 2428 TCGA-GR-A4D5-01 0 1299 0 1299 NA NA 0 1299 #> 2429 TCGA-GR-A4D6-01 0 1334 0 1334 0 1334 0 1334 #> 2430 TCGA-GR-A4D9-01 0 1739 0 1739 NA NA 1 1218 #> 2431 TCGA-GS-A9TQ-01 0 982 0 982 0 982 0 982 #> 2432 TCGA-GS-A9TT-01 0 1163 0 1163 NA NA 0 1163 #> 2433 TCGA-GS-A9TU-01 0 3897 0 3897 0 3897 0 3897 #> 2434 TCGA-GS-A9TV-01 0 730 0 730 0 730 0 730 #> 2435 TCGA-GS-A9TW-01 0 1617 0 1617 0 1617 0 1617 #> 2436 TCGA-GS-A9TX-01 0 1373 0 1373 0 1373 0 1373 #> 2437 TCGA-GS-A9TY-01 0 3333 0 3333 1 3255 1 3255 #> 2438 TCGA-GS-A9TZ-01 0 765 0 765 NA NA 0 765 #> 2439 TCGA-GS-A9U3-01 0 3394 0 3394 0 3394 0 3394 #> 2440 TCGA-GS-A9U4-01 1 391 1 391 NA NA 1 106 #> 2441 TCGA-RQ-A68N-01 0 788 0 788 NA NA 0 788 #> 2442 TCGA-RQ-A6JB-01 0 1 0 1 NA NA 0 1 #> 2443 TCGA-RQ-AAAT-01 0 17 0 17 0 17 0 17 #> 2444 TCGA-VB-A8QN-01 0 0 0 0 NA NA 0 0 #> 2445 TCGA-2H-A9GF-01 1 784 1 784 NA NA 1 172 #> 2446 TCGA-2H-A9GG-01 1 610 1 610 NA NA 1 504 #> 2447 TCGA-2H-A9GH-01 1 951 1 951 NA NA 1 800 #> 2448 TCGA-2H-A9GI-01 1 435 1 435 NA NA 1 400 #> 2449 TCGA-2H-A9GJ-01 1 1781 1 1781 NA NA 1 1261 #> 2450 TCGA-2H-A9GK-01 1 232 1 232 NA NA 1 113 #> 2451 TCGA-2H-A9GL-01 1 180 1 180 NA NA 1 109 #> 2452 TCGA-2H-A9GM-01 1 424 1 424 NA NA 1 367 #> 2453 TCGA-2H-A9GN-01 1 272 1 272 NA NA 1 242 #> 2454 TCGA-2H-A9GO-01 1 494 1 494 NA NA 1 362 #> 2455 TCGA-2H-A9GQ-01 1 128 1 128 NA NA 1 112 #> 2456 TCGA-2H-A9GR-01 1 987 1 987 NA NA 1 987 #> 2457 TCGA-IC-A6RE-01 0 234 0 234 0 234 0 234 #> 2458 TCGA-IC-A6RE-11 0 234 0 234 0 234 0 234 #> 2459 TCGA-IC-A6RF-01 0 477 0 477 1 293 1 293 #> 2460 TCGA-IC-A6RF-11 0 477 0 477 1 293 1 293 #> 2461 TCGA-IG-A3I8-01 0 1012 0 1012 0 1012 0 1012 #> 2462 TCGA-IG-A3I8-11 0 1012 0 1012 0 1012 0 1012 #> 2463 TCGA-IG-A3QL-01 0 1071 0 1071 0 1071 0 1071 #> 2464 TCGA-IG-A3Y9-01 1 26 0 26 0 26 0 26 #> 2465 TCGA-IG-A3YA-01 0 632 0 632 0 632 0 632 #> 2466 TCGA-IG-A3YB-01 0 80 0 80 0 80 0 80 #> 2467 TCGA-IG-A3YC-01 0 612 0 612 NA NA 1 542 #> 2468 TCGA-IG-A4P3-01 1 567 1 567 NA NA 1 567 #> 2469 TCGA-IG-A4QS-01 1 118 0 118 0 118 0 118 #> 2470 TCGA-IG-A4QT-01 1 283 0 283 0 283 0 283 #> 2471 TCGA-IG-A50L-01 0 16 0 16 NA NA 0 16 #> 2472 TCGA-IG-A51D-01 0 518 0 518 NA NA 0 518 #> 2473 TCGA-IG-A5B8-01 1 24 0 24 NA NA 0 24 #> 2474 TCGA-IG-A5S3-01 0 712 0 712 0 712 0 712 #> 2475 TCGA-IG-A625-01 1 390 0 390 NA NA 0 390 #> 2476 TCGA-IG-A6QS-01 1 303 0 303 0 303 0 303 #> 2477 TCGA-IG-A7DP-01 0 452 0 452 0 452 0 452 #> 2478 TCGA-IG-A8O2-01 1 142 0 142 0 142 0 142 #> 2479 TCGA-IG-A97H-01 0 441 0 441 0 441 0 441 #> 2480 TCGA-IG-A97I-01 0 370 0 370 0 370 0 370 #> 2481 TCGA-JY-A6F8-01 0 3714 0 3714 0 3714 0 3714 #> 2482 TCGA-JY-A6FA-01 1 1361 1 1361 NA NA 1 477 #> 2483 TCGA-JY-A6FB-01 0 1837 0 1837 0 1837 0 1837 #> 2484 TCGA-JY-A6FD-01 0 2069 0 2069 0 2069 0 2069 #> 2485 TCGA-JY-A6FE-01 1 112 1 112 NA NA 1 55 #> 2486 TCGA-JY-A6FG-01 1 1263 0 1263 NA NA 0 1263 #> 2487 TCGA-JY-A6FH-01 0 1441 0 1441 NA NA 1 749 #> 2488 TCGA-JY-A938-01 0 1060 0 1060 1 493 1 493 #> 2489 TCGA-JY-A939-01 0 660 0 660 NA NA 0 660 #> 2490 TCGA-JY-A93C-01 0 705 0 705 1 652 1 652 #> 2491 TCGA-JY-A93D-01 1 960 1 960 1 732 1 732 #> 2492 TCGA-JY-A93E-01 0 767 0 767 NA NA 0 767 #> 2493 TCGA-JY-A93F-01 0 731 0 731 0 731 0 731 #> 2494 TCGA-KH-A6WC-01 0 191 0 191 0 191 0 191 #> 2495 TCGA-L5-A43C-01 0 96 0 96 NA NA 0 96 #> 2496 TCGA-L5-A43C-11 0 96 0 96 NA NA 0 96 #> 2497 TCGA-L5-A43E-01 0 920 0 920 0 920 1 885 #> 2498 TCGA-L5-A43H-01 1 9 1 9 NA NA 1 9 #> 2499 TCGA-L5-A43I-01 1 556 0 556 0 556 0 556 #> 2500 TCGA-L5-A43J-01 1 131 1 131 NA NA 1 98 #> 2501 TCGA-L5-A43M-01 0 272 0 272 NA NA 0 272 #> 2502 TCGA-L5-A4OE-01 1 730 NA 730 0 730 0 730 #> 2503 TCGA-L5-A4OF-01 1 801 NA 801 0 801 0 801 #> 2504 TCGA-L5-A4OF-11 1 801 NA 801 0 801 0 801 #> 2505 TCGA-L5-A4OG-01 0 143 0 143 NA NA 0 143 #> 2506 TCGA-L5-A4OG-11 0 143 0 143 NA NA 0 143 #> 2507 TCGA-L5-A4OH-01 0 992 0 992 0 992 0 992 #> 2508 TCGA-L5-A4OI-01 0 608 0 608 NA NA 1 267 #> 2509 TCGA-L5-A4OJ-01 0 639 0 639 0 639 0 639 #> 2510 TCGA-L5-A4OJ-11 0 639 0 639 0 639 0 639 #> 2511 TCGA-L5-A4OM-01 1 1458 0 1458 0 1458 0 1458 #> 2512 TCGA-L5-A4OM-11 1 1458 0 1458 0 1458 0 1458 #> 2513 TCGA-L5-A4ON-01 1 558 0 558 0 558 0 558 #> 2514 TCGA-L5-A4OO-01 0 101 0 101 NA NA 0 101 #> 2515 TCGA-L5-A4OO-11 0 101 0 101 NA NA 0 101 #> 2516 TCGA-L5-A4OP-01 0 218 0 218 NA NA 0 218 #> 2517 TCGA-L5-A4OQ-01 1 42 1 42 NA NA 1 29 #> 2518 TCGA-L5-A4OQ-11 1 42 1 42 NA NA 1 29 #> 2519 TCGA-L5-A4OR-01 1 96 0 96 0 96 0 96 #> 2520 TCGA-L5-A4OR-11 1 96 0 96 0 96 0 96 #> 2521 TCGA-L5-A4OS-01 0 1782 0 1782 NA NA 0 1782 #> 2522 TCGA-L5-A4OT-01 1 149 1 149 NA NA 1 149 #> 2523 TCGA-L5-A4OU-01 0 882 0 882 NA NA 0 882 #> 2524 TCGA-L5-A4OW-01 1 217 0 217 0 217 0 217 #> 2525 TCGA-L5-A4OX-01 1 226 0 226 0 226 0 226 #> 2526 TCGA-L5-A88S-01 0 471 0 471 0 471 0 471 #> 2527 TCGA-L5-A88T-01 0 694 0 694 0 694 0 694 #> 2528 TCGA-L5-A88V-01 0 79 0 79 NA NA 0 79 #> 2529 TCGA-L5-A88W-01 1 764 1 764 NA NA 1 315 #> 2530 TCGA-L5-A88Y-01 0 11 0 11 NA NA 0 11 #> 2531 TCGA-L5-A88Z-01 0 225 0 225 NA NA 0 225 #> 2532 TCGA-L5-A891-01 0 114 0 114 NA NA 0 114 #> 2533 TCGA-L5-A893-01 0 92 0 92 NA NA 0 92 #> 2534 TCGA-L5-A8NE-01 0 1688 0 1688 NA NA 0 1688 #> 2535 TCGA-L5-A8NF-01 1 81 0 81 NA NA 0 81 #> 2536 TCGA-L5-A8NG-01 0 1094 0 1094 NA NA 0 1094 #> 2537 TCGA-L5-A8NH-01 1 393 0 393 NA NA 0 393 #> 2538 TCGA-L5-A8NI-01 1 410 1 410 NA NA 1 401 #> 2539 TCGA-L5-A8NJ-01 0 501 0 501 NA NA 1 396 #> 2540 TCGA-L5-A8NK-01 0 412 0 412 NA NA 1 325 #> 2541 TCGA-L5-A8NL-01 0 402 0 402 NA NA 0 402 #> 2542 TCGA-L5-A8NM-01 1 236 0 236 NA NA 0 236 #> 2543 TCGA-L5-A8NN-01 0 167 0 167 NA NA 0 167 #> 2544 TCGA-L5-A8NQ-01 1 650 1 650 NA NA 1 337 #> 2545 TCGA-L5-A8NR-01 0 265 0 265 NA NA 1 265 #> 2546 TCGA-L5-A8NS-01 0 408 0 408 NA NA 1 300 #> 2547 TCGA-L5-A8NT-01 0 825 0 825 NA NA 1 825 #> 2548 TCGA-L5-A8NU-01 1 2532 0 2532 NA NA 0 2532 #> 2549 TCGA-L5-A8NV-01 1 1599 1 1599 NA NA 1 1252 #> 2550 TCGA-L5-A8NW-01 1 1402 1 1402 NA NA 1 1147 #> 2551 TCGA-L7-A56G-01 1 330 1 330 NA NA 1 270 #> 2552 TCGA-L7-A6VZ-01 0 315 0 315 0 315 0 315 #> 2553 TCGA-LN-A49K-01 1 180 0 180 0 180 0 180 #> 2554 TCGA-LN-A49L-01 1 318 0 318 0 318 0 318 #> 2555 TCGA-LN-A49M-01 0 385 0 385 0 385 0 385 #> 2556 TCGA-LN-A49N-01 0 378 0 378 0 378 0 378 #> 2557 TCGA-LN-A49O-01 0 408 0 408 1 193 1 193 #> 2558 TCGA-LN-A49P-01 0 375 0 375 1 320 1 320 #> 2559 TCGA-LN-A49R-01 0 407 0 407 0 407 0 407 #> 2560 TCGA-LN-A49S-01 0 400 0 400 1 49 1 49 #> 2561 TCGA-LN-A49V-01 0 383 0 383 0 383 0 383 #> 2562 TCGA-LN-A49W-01 0 403 0 403 0 403 0 403 #> 2563 TCGA-LN-A49X-01 0 384 0 384 0 384 0 384 #> 2564 TCGA-LN-A49Y-01 0 379 0 379 1 90 1 90 #> 2565 TCGA-LN-A4A1-01 0 383 0 383 1 205 1 205 #> 2566 TCGA-LN-A4A2-01 0 380 0 380 0 380 0 380 #> 2567 TCGA-LN-A4A3-01 0 388 0 388 0 388 0 388 #> 2568 TCGA-LN-A4A4-01 0 383 0 383 0 383 0 383 #> 2569 TCGA-LN-A4A5-01 1 681 1 681 1 224 1 224 #> 2570 TCGA-LN-A4A6-01 0 391 0 391 1 158 1 158 #> 2571 TCGA-LN-A4A9-01 1 351 1 351 1 274 1 274 #> 2572 TCGA-LN-A4MQ-01 0 375 0 375 1 25 1 25 #> 2573 TCGA-LN-A4MR-01 0 402 0 402 1 226 1 226 #> 2574 TCGA-LN-A5U5-01 1 136 1 136 NA NA 1 136 #> 2575 TCGA-LN-A5U6-01 0 375 0 375 0 375 0 375 #> 2576 TCGA-LN-A5U7-01 0 768 0 768 1 535 1 535 #> 2577 TCGA-LN-A7HV-01 0 320 0 320 0 320 0 320 #> 2578 TCGA-LN-A7HW-01 0 365 0 365 1 97 1 97 #> 2579 TCGA-LN-A7HX-01 0 372 0 372 0 372 0 372 #> 2580 TCGA-LN-A7HY-01 0 366 0 366 1 88 1 88 #> 2581 TCGA-LN-A7HZ-01 0 401 0 401 1 117 1 117 #> 2582 TCGA-LN-A8HZ-01 0 375 0 375 0 375 0 375 #> 2583 TCGA-LN-A8I0-01 0 407 0 407 1 57 1 57 #> 2584 TCGA-LN-A8I1-01 0 401 0 401 0 401 0 401 #> 2585 TCGA-LN-A9FO-01 0 4 0 4 NA NA 0 4 #> 2586 TCGA-LN-A9FP-01 0 366 0 366 1 290 1 290 #> 2587 TCGA-LN-A9FQ-01 0 391 0 391 1 82 1 82 #> 2588 TCGA-LN-A9FR-01 0 373 0 373 0 373 0 373 #> 2589 TCGA-M9-A5M8-01 0 1007 0 1007 0 1007 0 1007 #> 2590 TCGA-Q9-A6FU-01 1 157 1 157 NA NA 1 99 #> 2591 TCGA-Q9-A6FW-01 0 238 0 238 0 238 0 238 #> 2592 TCGA-R6-A6DN-01 1 243 1 243 NA NA 1 199 #> 2593 TCGA-R6-A6DQ-01 1 231 1 231 NA NA 1 231 #> 2594 TCGA-R6-A6KZ-01 1 154 1 154 NA NA 1 154 #> 2595 TCGA-R6-A6L4-01 1 496 1 496 NA NA 1 160 #> 2596 TCGA-R6-A6L6-01 1 214 1 214 NA NA 1 214 #> 2597 TCGA-R6-A6XG-01 0 1168 0 1168 1 572 1 572 #> 2598 TCGA-R6-A6XQ-01 1 193 1 193 NA NA 1 193 #> 2599 TCGA-R6-A6Y0-01 0 1641 0 1641 NA NA 0 1641 #> 2600 TCGA-R6-A6Y2-01 1 283 1 283 NA NA 1 102 #> 2601 TCGA-R6-A8W5-01 1 480 1 480 NA NA 1 336 #> 2602 TCGA-R6-A8W8-01 1 88 1 88 NA NA 1 88 #> 2603 TCGA-R6-A8WC-01 0 70 0 70 NA NA 0 70 #> 2604 TCGA-R6-A8WG-01 1 386 1 386 NA NA 1 107 #> 2605 TCGA-RE-A7BO-01 1 213 0 213 NA NA 0 213 #> 2606 TCGA-S8-A6BV-01 0 609 0 609 NA NA 1 267 #> 2607 TCGA-S8-A6BW-01 0 620 0 620 0 620 0 620 #> 2608 TCGA-V5-A7RB-01 1 161 0 161 NA NA 0 161 #> 2609 TCGA-V5-A7RC-06 1 104 1 104 NA NA 1 88 #> 2610 TCGA-V5-A7RC-01 1 104 1 104 NA NA 1 88 #> 2611 TCGA-V5-A7RE-01 0 500 0 500 NA NA 1 294 #> 2612 TCGA-V5-A7RE-11 0 500 0 500 NA NA 1 294 #> 2613 TCGA-V5-AASV-01 0 467 0 467 NA NA 1 322 #> 2614 TCGA-V5-AASW-01 0 282 0 282 NA NA 1 282 #> 2615 TCGA-V5-AASX-01 0 273 0 273 NA NA 1 273 #> 2616 TCGA-V5-AASX-11 0 273 0 273 NA NA 1 273 #> 2617 TCGA-VR-A8EO-01 0 785 0 785 0 785 0 785 #> 2618 TCGA-VR-A8EP-01 0 824 0 824 NA NA 1 242 #> 2619 TCGA-VR-A8EQ-01 1 694 1 694 NA NA 1 694 #> 2620 TCGA-VR-A8ER-01 1 378 1 378 NA NA 1 378 #> 2621 TCGA-VR-A8ET-01 1 47 0 47 NA NA 0 47 #> 2622 TCGA-VR-A8EU-01 1 557 1 557 NA NA 1 557 #> 2623 TCGA-VR-A8EW-01 1 247 1 247 NA NA 1 247 #> 2624 TCGA-VR-A8EX-01 1 855 1 855 NA NA 1 855 #> 2625 TCGA-VR-A8EY-01 0 1025 0 1025 0 1025 0 1025 #> 2626 TCGA-VR-A8Q7-01 0 1590 0 1590 0 1590 0 1590 #> 2627 TCGA-VR-AA4D-01 1 1405 1 1405 NA NA 1 832 #> 2628 TCGA-VR-AA4G-01 0 549 0 549 0 549 0 549 #> 2629 TCGA-VR-AA7B-01 0 342 0 342 NA NA 1 207 #> 2630 TCGA-VR-AA7D-01 1 279 1 279 NA NA 1 244 #> 2631 TCGA-VR-AA7I-01 1 484 1 484 NA NA 1 484 #> 2632 TCGA-X8-AAAR-01 0 554 0 554 0 554 0 554 #> 2633 TCGA-XP-A8T6-01 1 763 0 763 0 763 0 763 #> 2634 TCGA-XP-A8T8-01 0 437 0 437 0 437 0 437 #> 2635 TCGA-Z6-A8JD-01 0 104 0 104 0 104 0 104 #> 2636 TCGA-Z6-A8JE-01 0 64 0 64 0 64 0 64 #> 2637 TCGA-Z6-A9VB-01 0 40 0 40 0 40 0 40 #> 2638 TCGA-Z6-AAPN-01 0 81 0 81 0 81 0 81 #> 2639 TCGA-ZR-A9CJ-01 1 600 1 600 NA NA 1 163 #> 2640 TCGA-02-0047-01 1 448 1 448 NA NA 1 57 #> 2641 TCGA-02-0055-01 1 76 1 76 NA NA 1 6 #> 2642 TCGA-02-2483-01 0 466 0 466 NA NA 0 466 #> 2643 TCGA-02-2485-01 0 470 0 470 NA NA 1 186 #> 2644 TCGA-06-0125-02 1 1448 1 1448 NA NA 1 797 #> 2645 TCGA-06-0125-01 1 1448 1 1448 NA NA 1 797 #> 2646 TCGA-06-0129-01 1 1024 1 1024 NA NA 1 148 #> 2647 TCGA-06-0130-01 1 394 1 394 NA NA 1 244 #> 2648 TCGA-06-0132-01 1 771 1 771 NA NA 1 482 #> 2649 TCGA-06-0138-01 1 737 1 737 NA NA 1 394 #> 2650 TCGA-06-0139-01 1 362 1 362 NA NA 1 152 #> 2651 TCGA-06-0141-01 1 313 1 313 NA NA 1 145 #> 2652 TCGA-06-0152-02 1 375 1 375 NA NA 1 299 #> 2653 TCGA-06-0156-01 1 178 1 178 NA NA 1 178 #> 2654 TCGA-06-0157-01 1 97 1 97 NA NA 1 97 #> 2655 TCGA-06-0158-01 1 329 1 329 NA NA 1 90 #> 2656 TCGA-06-0168-01 1 598 1 598 NA NA 1 461 #> 2657 TCGA-06-0171-02 1 399 1 399 NA NA 1 117 #> 2658 TCGA-06-0174-01 1 98 1 98 NA NA 1 47 #> 2659 TCGA-06-0178-01 1 2681 1 2681 NA NA 1 192 #> 2660 TCGA-06-0184-01 1 2126 1 2126 NA NA 1 1276 #> 2661 TCGA-06-0187-01 1 828 1 828 NA NA 1 531 #> 2662 TCGA-06-0190-02 1 317 1 317 NA NA 1 88 #> 2663 TCGA-06-0190-01 1 317 1 317 NA NA 1 88 #> 2664 TCGA-06-0210-02 1 225 1 225 NA NA 1 67 #> 2665 TCGA-06-0210-01 1 225 1 225 NA NA 1 67 #> 2666 TCGA-06-0211-02 1 360 1 360 NA NA 1 53 #> 2667 TCGA-06-0211-01 1 360 1 360 NA NA 1 53 #> 2668 TCGA-06-0219-01 1 22 1 22 NA NA 1 22 #> 2669 TCGA-06-0221-02 1 603 1 603 NA NA 1 260 #> 2670 TCGA-06-0238-01 1 405 1 405 NA NA 1 311 #> 2671 TCGA-06-0644-01 1 384 1 384 NA NA 1 85 #> 2672 TCGA-06-0645-01 1 175 1 175 NA NA 1 175 #> 2673 TCGA-06-0646-01 1 175 1 175 NA NA 1 90 #> 2674 TCGA-06-0649-01 1 64 1 64 NA NA 1 64 #> 2675 TCGA-06-0686-01 1 432 1 432 NA NA 1 160 #> 2676 TCGA-06-0743-01 1 803 1 803 NA NA 1 176 #> 2677 TCGA-06-0744-01 1 1426 1 1426 NA NA 1 1277 #> 2678 TCGA-06-0745-01 1 239 1 239 NA NA 1 92 #> 2679 TCGA-06-0747-01 1 82 1 82 NA NA 1 82 #> 2680 TCGA-06-0749-01 1 82 1 82 NA NA 1 82 #> 2681 TCGA-06-0750-01 1 28 1 28 NA NA 1 28 #> 2682 TCGA-06-0878-01 0 218 0 218 NA NA 1 66 #> 2683 TCGA-06-0882-01 1 632 1 632 NA NA 1 213 #> 2684 TCGA-06-1804-01 1 414 1 414 NA NA 1 414 #> 2685 TCGA-06-2557-01 1 33 1 33 NA NA 1 33 #> 2686 TCGA-06-2558-01 1 380 NA 380 NA NA 0 380 #> 2687 TCGA-06-2559-01 1 150 1 150 NA NA 1 150 #> 2688 TCGA-06-2561-01 1 537 1 537 NA NA 1 78 #> 2689 TCGA-06-2562-01 1 382 1 382 NA NA 1 151 #> 2690 TCGA-06-2563-01 0 932 0 932 NA NA 1 554 #> 2691 TCGA-06-2564-01 0 181 0 181 NA NA 0 181 #> 2692 TCGA-06-2565-01 1 506 1 506 NA NA 1 178 #> 2693 TCGA-06-2567-01 1 133 1 133 NA NA 1 133 #> 2694 TCGA-06-2569-01 0 13 0 13 NA NA 0 13 #> 2695 TCGA-06-2570-01 0 958 0 958 NA NA 0 958 #> 2696 TCGA-06-5408-01 1 357 1 357 NA NA 1 158 #> 2697 TCGA-06-5410-01 1 108 1 108 NA NA 1 108 #> 2698 TCGA-06-5411-01 1 254 1 254 NA NA 1 214 #> 2699 TCGA-06-5412-01 1 138 1 138 NA NA 1 88 #> 2700 TCGA-06-5413-01 0 268 0 268 NA NA 1 195 #> 2701 TCGA-06-5414-01 0 273 0 273 NA NA 1 167 #> 2702 TCGA-06-5415-01 0 260 0 260 NA NA 0 260 #> 2703 TCGA-06-5416-01 0 204 0 204 NA NA 0 204 #> 2704 TCGA-06-5417-01 0 155 0 155 NA NA 0 155 #> 2705 TCGA-06-5418-01 1 83 1 83 NA NA 1 83 #> 2706 TCGA-06-5856-01 1 114 1 114 NA NA 1 114 #> 2707 TCGA-06-5858-01 0 187 0 187 NA NA 1 97 #> 2708 TCGA-06-5859-01 0 139 0 139 NA NA 0 139 #> 2709 TCGA-08-0386-01 1 548 1 548 NA NA 1 427 #> 2710 TCGA-12-0616-01 1 448 1 448 NA NA 1 398 #> 2711 TCGA-12-0618-01 1 395 NA 395 NA NA 0 395 #> 2712 TCGA-12-0619-01 1 1062 1 1062 NA NA 1 203 #> 2713 TCGA-12-0821-01 1 323 1 323 NA NA 1 259 #> 2714 TCGA-12-1597-01 1 675 1 675 NA NA 1 180 #> 2715 TCGA-12-3650-01 1 333 1 333 NA NA 1 239 #> 2716 TCGA-12-3652-01 1 1062 1 1062 NA NA 1 203 #> 2717 TCGA-12-3653-01 1 442 1 442 NA NA 1 224 #> 2718 TCGA-12-5295-01 1 454 1 454 NA NA 1 399 #> 2719 TCGA-12-5299-01 1 98 1 98 NA NA 1 98 #> 2720 TCGA-14-0736-02 1 460 1 460 NA NA 1 128 #> 2721 TCGA-14-0781-01 1 29 1 29 NA NA 1 29 #> 2722 TCGA-14-0787-01 1 68 NA 68 NA NA 0 68 #> 2723 TCGA-14-0789-01 1 342 NA 342 NA NA 1 105 #> 2724 TCGA-14-0790-01 1 419 1 419 NA NA 1 419 #> 2725 TCGA-14-0817-01 1 164 NA 164 NA NA 0 164 #> 2726 TCGA-14-0871-01 1 880 NA 880 NA NA 0 880 #> 2727 TCGA-14-1034-02 1 485 1 485 NA NA 1 282 #> 2728 TCGA-14-1034-01 1 485 1 485 NA NA 1 282 #> 2729 TCGA-14-1402-02 1 975 1 975 NA NA 1 333 #> 2730 TCGA-14-1823-01 1 543 1 543 NA NA 1 140 #> 2731 TCGA-14-1825-01 1 232 1 232 NA NA 1 82 #> 2732 TCGA-14-1829-01 0 218 0 218 NA NA 0 218 #> 2733 TCGA-14-2554-01 1 532 1 532 NA NA 1 532 #> 2734 TCGA-15-0742-01 1 419 NA 419 NA NA 1 232 #> 2735 TCGA-15-1444-01 1 1537 1 1537 1 1550 1 1550 #> 2736 TCGA-16-0846-01 1 119 1 119 NA NA 1 119 #> 2737 TCGA-16-1045-01 1 883 1 883 NA NA 1 654 #> 2738 TCGA-19-0957-02 1 666 1 666 NA NA 1 50 #> 2739 TCGA-19-1389-02 1 141 1 141 NA NA 1 81 #> 2740 TCGA-19-1390-01 1 772 NA 772 NA NA 0 772 #> 2741 TCGA-19-1787-01 1 385 1 385 NA NA 1 308 #> 2742 TCGA-19-2619-01 0 294 0 294 NA NA 1 146 #> 2743 TCGA-19-2620-01 1 148 0 148 NA NA 0 148 #> 2744 TCGA-19-2624-01 1 5 0 5 NA NA 0 5 #> 2745 TCGA-19-2625-01 1 124 0 124 NA NA 0 124 #> 2746 TCGA-19-2629-01 1 737 1 737 NA NA 1 145 #> 2747 TCGA-19-4065-02 0 214 0 214 NA NA 1 70 #> 2748 TCGA-19-4065-01 0 214 0 214 NA NA 1 70 #> 2749 TCGA-19-5960-01 1 455 1 455 NA NA 1 382 #> 2750 TCGA-26-1442-01 0 953 0 953 NA NA 0 953 #> 2751 TCGA-26-5132-01 0 286 0 286 NA NA 0 286 #> 2752 TCGA-26-5133-01 0 452 0 452 NA NA 1 370 #> 2753 TCGA-26-5134-01 0 167 0 167 NA NA 0 167 #> 2754 TCGA-26-5135-01 1 270 NA 270 NA NA 0 270 #> 2755 TCGA-26-5136-01 1 577 1 577 NA NA 1 577 #> 2756 TCGA-26-5139-01 0 48 0 48 NA NA 0 48 #> 2757 TCGA-27-1830-01 1 154 1 154 NA NA 1 124 #> 2758 TCGA-27-1831-01 1 505 1 505 NA NA 1 144 #> 2759 TCGA-27-1832-01 1 300 1 300 NA NA 1 176 #> 2760 TCGA-27-1834-01 1 1233 1 1233 NA NA 1 335 #> 2761 TCGA-27-1835-01 1 648 1 648 NA NA 1 157 #> 2762 TCGA-27-1837-01 1 427 1 427 NA NA 1 136 #> 2763 TCGA-27-2519-01 1 550 1 550 NA NA 1 256 #> 2764 TCGA-27-2521-01 1 510 1 510 NA NA 1 510 #> 2765 TCGA-27-2523-01 1 489 1 489 NA NA 1 402 #> 2766 TCGA-27-2524-01 1 231 1 231 NA NA 1 231 #> 2767 TCGA-27-2526-01 1 87 1 87 NA NA 1 87 #> 2768 TCGA-27-2528-01 1 480 1 480 NA NA 1 72 #> 2769 TCGA-28-1747-01 1 77 NA 77 NA NA 0 77 #> 2770 TCGA-28-1753-01 0 37 0 37 NA NA 0 37 #> 2771 TCGA-28-2499-01 0 95 NA 95 NA NA 0 95 #> 2772 TCGA-28-2509-01 0 145 0 145 NA NA 0 145 #> 2773 TCGA-28-2513-01 0 222 0 222 NA NA 1 75 #> 2774 TCGA-28-2514-01 0 160 0 160 NA NA 0 160 #> 2775 TCGA-28-5204-01 1 454 1 454 NA NA 1 454 #> 2776 TCGA-28-5207-01 1 343 1 343 NA NA 1 343 #> 2777 TCGA-28-5208-01 1 544 1 544 NA NA 1 148 #> 2778 TCGA-28-5209-01 0 442 0 442 NA NA 0 442 #> 2779 TCGA-28-5213-01 0 951 0 951 NA NA 0 951 #> 2780 TCGA-28-5215-01 1 335 1 335 NA NA 1 164 #> 2781 TCGA-28-5216-01 0 415 0 415 NA NA 0 415 #> 2782 TCGA-28-5218-01 1 157 NA 157 NA NA 0 157 #> 2783 TCGA-28-5220-01 1 388 1 388 NA NA 1 262 #> 2784 TCGA-32-1970-01 1 468 1 468 NA NA 1 408 #> 2785 TCGA-32-1980-01 1 36 1 36 NA NA 1 36 #> 2786 TCGA-32-1982-01 1 142 1 142 NA NA 1 142 #> 2787 TCGA-32-2615-01 1 485 1 485 NA NA 1 131 #> 2788 TCGA-32-2616-01 1 224 1 224 NA NA 1 182 #> 2789 TCGA-32-2632-01 1 269 1 269 NA NA 1 269 #> 2790 TCGA-32-2634-01 0 693 0 693 NA NA 0 693 #> 2791 TCGA-32-4213-01 0 604 0 604 NA NA 1 353 #> 2792 TCGA-32-5222-01 1 585 1 585 NA NA 1 118 #> 2793 TCGA-41-2571-01 1 26 1 26 NA NA 1 26 #> 2794 TCGA-41-2572-01 1 406 1 406 NA NA 1 122 #> 2795 TCGA-41-3915-01 1 360 1 360 NA NA 1 288 #> 2796 TCGA-41-4097-01 1 6 1 6 NA NA 1 6 #> 2797 TCGA-41-5651-01 1 460 1 460 NA NA 1 210 #> 2798 TCGA-76-4925-01 1 146 NA 146 NA NA 1 88 #> 2799 TCGA-76-4926-01 1 138 1 138 NA NA 1 34 #> 2800 TCGA-76-4927-01 1 535 1 535 NA NA 1 416 #> 2801 TCGA-76-4928-01 1 94 1 94 NA NA 1 94 #> 2802 TCGA-76-4929-01 1 111 1 111 NA NA 1 111 #> 2803 TCGA-76-4931-01 1 279 1 279 NA NA 1 112 #> 2804 TCGA-76-4932-01 1 1458 1 1458 NA NA 1 1458 #> 2805 TCGA-4P-AA8J-01 0 102 0 102 NA NA 0 102 #> 2806 TCGA-BA-4074-01 1 462 1 462 NA NA 1 396 #> 2807 TCGA-BA-4075-01 1 283 1 283 NA NA 1 236 #> 2808 TCGA-BA-4076-01 1 415 1 415 NA NA 1 286 #> 2809 TCGA-BA-4077-01 1 1134 1 1134 NA NA 1 1134 #> 2810 TCGA-BA-4078-01 1 276 1 276 NA NA 1 276 #> 2811 TCGA-BA-5149-01 1 806 1 806 NA NA 1 389 #> 2812 TCGA-BA-5151-01 0 722 0 722 NA NA 1 517 #> 2813 TCGA-BA-5152-01 0 1288 0 1288 NA NA 0 1288 #> 2814 TCGA-BA-5153-01 1 1762 1 1762 1 1522 1 1522 #> 2815 TCGA-BA-5555-01 0 520 0 520 NA NA 1 248 #> 2816 TCGA-BA-5556-01 0 725 0 725 0 725 0 725 #> 2817 TCGA-BA-5557-01 0 623 0 623 NA NA 0 623 #> 2818 TCGA-BA-5558-01 0 1995 0 1995 NA NA 0 1995 #> 2819 TCGA-BA-5559-01 1 2083 1 2083 NA NA 1 1614 #> 2820 TCGA-BA-6868-01 1 472 1 472 NA NA 1 344 #> 2821 TCGA-BA-6869-01 0 644 0 644 0 644 0 644 #> 2822 TCGA-BA-6870-01 1 451 NA 451 NA NA 0 451 #> 2823 TCGA-BA-6871-01 1 108 1 108 NA NA 1 108 #> 2824 TCGA-BA-6872-01 1 384 1 384 NA NA 1 384 #> 2825 TCGA-BA-6873-01 0 122 0 122 NA NA 1 66 #> 2826 TCGA-BA-7269-01 0 1273 0 1273 0 1273 0 1273 #> 2827 TCGA-BA-A4IF-01 0 895 0 895 NA NA 1 463 #> 2828 TCGA-BA-A4IG-01 0 855 0 855 NA NA 0 855 #> 2829 TCGA-BA-A4IH-01 0 622 0 622 NA NA 0 622 #> 2830 TCGA-BA-A4II-01 0 918 0 918 1 197 1 197 #> 2831 TCGA-BA-A6D8-01 0 850 0 850 NA NA 1 849 #> 2832 TCGA-BA-A6DA-01 0 351 0 351 NA NA 0 351 #> 2833 TCGA-BA-A6DB-01 0 216 0 216 1 208 1 208 #> 2834 TCGA-BA-A6DD-01 1 173 1 173 NA NA 1 96 #> 2835 TCGA-BA-A6DE-01 0 440 0 440 0 440 0 440 #> 2836 TCGA-BA-A6DG-01 1 69 1 69 NA NA 1 69 #> 2837 TCGA-BA-A6DI-01 1 336 1 336 1 266 1 266 #> 2838 TCGA-BA-A6DJ-01 1 407 1 407 NA NA 1 240 #> 2839 TCGA-BA-A6DL-01 0 623 0 623 0 623 0 623 #> 2840 TCGA-BA-A8YP-01 0 499 0 499 NA NA 0 499 #> 2841 TCGA-BB-4217-01 0 187 0 187 NA NA 0 187 #> 2842 TCGA-BB-4223-01 0 3221 0 3221 NA NA 0 3221 #> 2843 TCGA-BB-4224-01 0 278 0 278 NA NA 1 175 #> 2844 TCGA-BB-4225-01 0 146 0 146 NA NA 0 146 #> 2845 TCGA-BB-4227-01 0 134 0 134 NA NA 1 85 #> 2846 TCGA-BB-4228-01 0 559 0 559 0 559 0 559 #> 2847 TCGA-BB-7861-01 0 682 0 682 0 682 0 682 #> 2848 TCGA-BB-7862-01 0 1117 0 1117 NA NA 0 1117 #> 2849 TCGA-BB-7863-01 0 1025 0 1025 0 1025 0 1025 #> 2850 TCGA-BB-7864-01 0 1527 0 1527 NA NA 0 1527 #> 2851 TCGA-BB-7866-01 0 1368 0 1368 0 1368 0 1368 #> 2852 TCGA-BB-7870-01 0 2016 0 2016 NA NA 0 2016 #> 2853 TCGA-BB-7871-01 0 750 0 750 NA NA 1 428 #> 2854 TCGA-BB-7872-01 0 1168 0 1168 NA NA 0 1168 #> 2855 TCGA-BB-8596-01 0 2161 0 2161 NA NA 0 2161 #> 2856 TCGA-BB-8601-01 0 624 0 624 NA NA 1 440 #> 2857 TCGA-BB-A5HU-01 0 782 0 782 NA NA 0 782 #> 2858 TCGA-BB-A5HY-01 1 321 1 321 NA NA 1 230 #> 2859 TCGA-BB-A5HZ-01 0 827 0 827 NA NA 1 438 #> 2860 TCGA-BB-A6UM-01 0 393 0 393 0 393 0 393 #> 2861 TCGA-BB-A6UO-01 1 268 1 268 NA NA 1 212 #> 2862 TCGA-C9-A47Z-01 1 191 0 191 0 191 0 191 #> 2863 TCGA-C9-A480-01 0 386 0 386 0 386 0 386 #> 2864 TCGA-CN-4722-01 0 1483 0 1483 0 1483 0 1483 #> 2865 TCGA-CN-4723-01 0 1699 0 1699 NA NA 0 1699 #> 2866 TCGA-CN-4725-01 0 1157 0 1157 0 1157 0 1157 #> 2867 TCGA-CN-4726-01 1 142 1 142 NA NA 1 79 #> 2868 TCGA-CN-4727-01 0 1560 0 1560 NA NA 0 1560 #> 2869 TCGA-CN-4728-01 0 1724 0 1724 NA NA 0 1724 #> 2870 TCGA-CN-4729-01 0 392 0 392 NA NA 0 392 #> 2871 TCGA-CN-4730-01 0 817 0 817 NA NA 0 817 #> 2872 TCGA-CN-4731-01 1 998 1 998 NA NA 1 243 #> 2873 TCGA-CN-4733-01 0 1586 0 1586 0 1586 0 1586 #> 2874 TCGA-CN-4734-01 0 1690 0 1690 0 1690 0 1690 #> 2875 TCGA-CN-4735-01 0 1737 0 1737 NA NA 0 1737 #> 2876 TCGA-CN-4736-01 1 395 1 395 1 209 1 209 #> 2877 TCGA-CN-4737-01 0 625 0 625 NA NA 0 625 #> 2878 TCGA-CN-4738-01 1 436 NA 436 NA NA 0 436 #> 2879 TCGA-CN-4739-01 1 1394 1 1394 NA NA 1 1302 #> 2880 TCGA-CN-4740-01 1 839 1 839 NA NA 1 224 #> 2881 TCGA-CN-4741-01 0 2239 0 2239 NA NA 1 1716 #> 2882 TCGA-CN-4742-01 1 397 1 397 NA NA 1 397 #> 2883 TCGA-CN-5355-01 0 1278 0 1278 NA NA 0 1278 #> 2884 TCGA-CN-5356-01 0 1409 0 1409 0 1409 0 1409 #> 2885 TCGA-CN-5358-01 1 261 0 261 1 145 1 145 #> 2886 TCGA-CN-5359-01 1 377 1 377 NA NA 1 356 #> 2887 TCGA-CN-5360-01 0 2169 0 2169 NA NA 0 2169 #> 2888 TCGA-CN-5361-01 1 2120 0 2120 NA NA 1 2062 #> 2889 TCGA-CN-5363-01 1 253 1 253 NA NA 1 53 #> 2890 TCGA-CN-5364-01 1 493 0 493 NA NA 0 493 #> 2891 TCGA-CN-5365-01 1 351 1 351 NA NA 1 351 #> 2892 TCGA-CN-5366-01 1 360 1 360 NA NA 1 276 #> 2893 TCGA-CN-5367-01 1 352 0 352 NA NA 0 352 #> 2894 TCGA-CN-5369-01 1 380 0 380 NA NA 0 380 #> 2895 TCGA-CN-5370-01 1 259 1 259 1 123 1 123 #> 2896 TCGA-CN-5373-01 0 1584 0 1584 0 1584 0 1584 #> 2897 TCGA-CN-5374-01 1 1732 0 1732 NA NA 1 1369 #> 2898 TCGA-CN-6010-01 0 1523 0 1523 NA NA 1 540 #> 2899 TCGA-CN-6011-01 0 933 0 933 NA NA 0 933 #> 2900 TCGA-CN-6012-01 0 1460 0 1460 NA NA 0 1460 #> 2901 TCGA-CN-6013-01 1 727 1 727 NA NA 1 323 #> 2902 TCGA-CN-6016-01 0 1443 0 1443 NA NA 0 1443 #> 2903 TCGA-CN-6017-01 1 853 0 853 NA NA 0 853 #> 2904 TCGA-CN-6018-01 1 580 0 580 NA NA 0 580 #> 2905 TCGA-CN-6019-01 0 1038 0 1038 NA NA 0 1038 #> 2906 TCGA-CN-6020-01 1 205 0 205 NA NA 0 205 #> 2907 TCGA-CN-6021-01 1 276 1 276 NA NA 1 276 #> 2908 TCGA-CN-6022-01 1 281 1 281 NA NA 1 101 #> 2909 TCGA-CN-6023-01 0 1584 0 1584 NA NA 0 1584 #> 2910 TCGA-CN-6024-01 1 337 1 337 NA NA 1 156 #> 2911 TCGA-CN-6988-01 0 318 0 318 NA NA 0 318 #> 2912 TCGA-CN-6989-01 1 980 1 980 NA NA 1 436 #> 2913 TCGA-CN-6992-01 0 1066 0 1066 NA NA 0 1066 #> 2914 TCGA-CN-6994-01 0 1183 0 1183 NA NA 0 1183 #> 2915 TCGA-CN-6995-01 1 112 0 112 NA NA 0 112 #> 2916 TCGA-CN-6996-01 1 530 1 530 NA NA 1 350 #> 2917 TCGA-CN-6997-01 1 988 0 988 NA NA 1 279 #> 2918 TCGA-CN-6998-01 1 357 1 357 NA NA 1 244 #> 2919 TCGA-CN-A497-01 0 1065 0 1065 NA NA 0 1065 #> 2920 TCGA-CN-A498-01 1 773 1 773 1 186 1 186 #> 2921 TCGA-CN-A499-01 0 717 0 717 0 717 0 717 #> 2922 TCGA-CN-A49A-01 1 526 1 526 NA NA 1 344 #> 2923 TCGA-CN-A49B-01 0 904 0 904 0 904 0 904 #> 2924 TCGA-CN-A49C-01 0 645 0 645 NA NA 0 645 #> 2925 TCGA-CN-A63T-01 0 225 0 225 NA NA 0 225 #> 2926 TCGA-CN-A63U-01 0 964 0 964 NA NA 0 964 #> 2927 TCGA-CN-A63V-01 0 679 0 679 NA NA 0 679 #> 2928 TCGA-CN-A63W-01 1 377 0 377 NA NA 0 377 #> 2929 TCGA-CN-A641-01 0 367 0 367 NA NA 0 367 #> 2930 TCGA-CN-A642-01 1 82 1 82 NA NA 1 82 #> 2931 TCGA-CN-A6UY-01 0 713 0 713 NA NA 0 713 #> 2932 TCGA-CN-A6V1-01 0 603 0 603 NA NA 0 603 #> 2933 TCGA-CN-A6V3-01 0 742 0 742 NA NA 0 742 #> 2934 TCGA-CN-A6V6-01 0 635 0 635 NA NA 0 635 #> 2935 TCGA-CN-A6V7-01 0 594 0 594 NA NA 0 594 #> 2936 TCGA-CQ-5323-01 0 1466 0 1466 0 1466 0 1466 #> 2937 TCGA-CQ-5324-01 0 1593 0 1593 NA NA 0 1593 #> 2938 TCGA-CQ-5325-01 1 654 1 654 1 204 1 204 #> 2939 TCGA-CQ-5326-01 1 89 1 89 NA NA 1 89 #> 2940 TCGA-CQ-5327-01 0 1660 0 1660 NA NA 0 1660 #> 2941 TCGA-CQ-5329-01 0 2143 0 2143 0 2143 0 2143 #> 2942 TCGA-CQ-5330-01 0 1897 0 1897 NA NA 0 1897 #> 2943 TCGA-CQ-5331-01 0 1399 0 1399 NA NA 0 1399 #> 2944 TCGA-CQ-5332-01 1 317 NA 317 NA NA 0 317 #> 2945 TCGA-CQ-5333-01 1 341 1 341 1 176 1 176 #> 2946 TCGA-CQ-5334-01 1 129 1 129 NA NA 1 50 #> 2947 TCGA-CQ-6218-01 0 1253 0 1253 NA NA 0 1253 #> 2948 TCGA-CQ-6219-01 1 479 1 479 NA NA 1 195 #> 2949 TCGA-CQ-6220-01 1 985 NA 985 0 985 0 985 #> 2950 TCGA-CQ-6221-01 0 1000 0 1000 0 1000 0 1000 #> 2951 TCGA-CQ-6222-01 0 2016 0 2016 NA NA 0 2016 #> 2952 TCGA-CQ-6223-01 0 1428 0 1428 NA NA 0 1428 #> 2953 TCGA-CQ-6224-01 0 1721 0 1721 NA NA 0 1721 #> 2954 TCGA-CQ-6225-01 1 403 NA 403 NA NA 1 180 #> 2955 TCGA-CQ-6227-01 1 129 1 129 NA NA 1 129 #> 2956 TCGA-CQ-6228-01 1 456 NA 456 NA NA 1 273 #> 2957 TCGA-CQ-6229-01 0 1179 0 1179 0 1179 0 1179 #> 2958 TCGA-CQ-7063-01 0 2133 0 2133 1 1160 1 1160 #> 2959 TCGA-CQ-7065-01 0 1628 0 1628 1 230 1 230 #> 2960 TCGA-CQ-7067-01 0 509 0 509 0 509 0 509 #> 2961 TCGA-CQ-7068-01 0 1309 0 1309 0 1309 1 1148 #> 2962 TCGA-CQ-7069-01 0 1274 0 1274 0 1274 0 1274 #> 2963 TCGA-CQ-7071-01 0 1311 0 1311 NA NA 0 1311 #> 2964 TCGA-CQ-7072-01 0 2359 0 2359 NA NA 0 2359 #> 2965 TCGA-CQ-A4C6-01 0 1353 0 1353 0 1353 0 1353 #> 2966 TCGA-CQ-A4C7-01 1 353 NA 353 1 207 1 207 #> 2967 TCGA-CQ-A4C9-01 0 707 0 707 1 287 1 287 #> 2968 TCGA-CQ-A4CA-01 0 NA 0 NA 0 NA 0 NA #> 2969 TCGA-CQ-A4CB-01 0 893 0 893 0 893 0 893 #> 2970 TCGA-CQ-A4CD-01 0 1022 0 1022 NA NA 0 1022 #> 2971 TCGA-CQ-A4CE-01 0 897 0 897 0 897 0 897 #> 2972 TCGA-CQ-A4CG-01 1 430 1 430 1 350 1 350 #> 2973 TCGA-CQ-A4CH-01 1 379 1 379 NA NA 1 210 #> 2974 TCGA-CQ-A4CI-01 0 950 0 950 1 517 1 517 #> 2975 TCGA-CR-5243-01 0 2562 0 2562 NA NA 0 2562 #> 2976 TCGA-CR-5247-01 0 358 0 358 0 358 0 358 #> 2977 TCGA-CR-5248-01 0 1663 0 1663 NA NA 1 936 #> 2978 TCGA-CR-5249-01 0 1152 0 1152 0 1152 0 1152 #> 2979 TCGA-CR-5250-01 0 799 0 799 0 799 0 799 #> 2980 TCGA-CR-6467-01 0 1777 0 1777 NA NA 0 1777 #> 2981 TCGA-CR-6470-01 0 1521 0 1521 NA NA 0 1521 #> 2982 TCGA-CR-6471-01 1 1202 1 1202 NA NA 1 498 #> 2983 TCGA-CR-6472-01 0 1050 0 1050 NA NA 0 1050 #> 2984 TCGA-CR-6473-01 0 1125 0 1125 NA NA 0 1125 #> 2985 TCGA-CR-6474-01 1 564 1 564 NA NA 1 220 #> 2986 TCGA-CR-6477-01 0 514 0 514 NA NA 0 514 #> 2987 TCGA-CR-6478-01 1 183 NA 183 NA NA 0 183 #> 2988 TCGA-CR-6480-01 0 362 0 362 NA NA 0 362 #> 2989 TCGA-CR-6481-01 0 311 0 311 NA NA 0 311 #> 2990 TCGA-CR-6482-01 0 345 0 345 NA NA 0 345 #> 2991 TCGA-CR-6484-01 0 354 0 354 NA NA 0 354 #> 2992 TCGA-CR-6487-01 0 234 0 234 0 234 0 234 #> 2993 TCGA-CR-6488-01 0 379 0 379 0 379 0 379 #> 2994 TCGA-CR-6491-01 0 693 0 693 NA NA 1 499 #> 2995 TCGA-CR-6492-01 0 479 0 479 NA NA 0 479 #> 2996 TCGA-CR-6493-01 1 282 1 282 NA NA 1 247 #> 2997 TCGA-CR-7364-01 0 1435 0 1435 0 1435 0 1435 #> 2998 TCGA-CR-7365-01 0 1191 0 1191 NA NA 0 1191 #> 2999 TCGA-CR-7367-01 0 1440 0 1440 NA NA 0 1440 #> 3000 TCGA-CR-7368-01 0 1245 0 1245 NA NA 0 1245 #> 3001 TCGA-CR-7369-01 1 1090 0 1090 NA NA 0 1090 #> 3002 TCGA-CR-7370-01 0 105 0 105 0 105 0 105 #> 3003 TCGA-CR-7371-01 1 94 NA 94 NA NA 0 94 #> 3004 TCGA-CR-7372-01 0 759 0 759 0 759 0 759 #> 3005 TCGA-CR-7373-01 0 889 0 889 NA NA 0 889 #> 3006 TCGA-CR-7374-01 0 30 0 30 NA NA 0 30 #> 3007 TCGA-CR-7376-01 0 972 0 972 0 972 0 972 #> 3008 TCGA-CR-7377-01 1 279 NA 279 NA NA 0 279 #> 3009 TCGA-CR-7379-01 0 1036 0 1036 NA NA 0 1036 #> 3010 TCGA-CR-7380-01 1 606 1 606 NA NA 1 561 #> 3011 TCGA-CR-7382-01 0 796 0 796 NA NA 1 614 #> 3012 TCGA-CR-7383-01 1 521 1 521 1 454 1 454 #> 3013 TCGA-CR-7385-01 0 997 0 997 NA NA 0 997 #> 3014 TCGA-CR-7386-01 0 1430 0 1430 NA NA 1 1028 #> 3015 TCGA-CR-7388-01 1 823 1 823 NA NA 1 334 #> 3016 TCGA-CR-7389-01 0 392 0 392 0 392 0 392 #> 3017 TCGA-CR-7390-01 0 1508 0 1508 NA NA 0 1508 #> 3018 TCGA-CR-7391-01 0 913 0 913 0 913 0 913 #> 3019 TCGA-CR-7392-01 0 1425 0 1425 NA NA 0 1425 #> 3020 TCGA-CR-7393-01 0 993 0 993 0 993 0 993 #> 3021 TCGA-CR-7394-01 0 1346 0 1346 NA NA 0 1346 #> 3022 TCGA-CR-7395-01 0 930 0 930 0 930 0 930 #> 3023 TCGA-CR-7397-01 0 754 0 754 NA NA 0 754 #> 3024 TCGA-CR-7398-01 0 156 0 156 0 156 0 156 #> 3025 TCGA-CR-7399-01 0 181 0 181 NA NA 0 181 #> 3026 TCGA-CR-7401-01 0 1077 0 1077 0 1077 0 1077 #> 3027 TCGA-CR-7402-01 0 911 0 911 0 911 0 911 #> 3028 TCGA-CR-7404-01 0 1472 0 1472 NA NA 1 234 #> 3029 TCGA-CV-5430-01 0 4241 0 4241 NA NA 1 783 #> 3030 TCGA-CV-5431-01 1 522 0 522 NA NA 0 522 #> 3031 TCGA-CV-5432-01 0 3930 0 3930 NA NA 0 3930 #> 3032 TCGA-CV-5434-01 1 3314 0 3314 NA NA 1 1859 #> 3033 TCGA-CV-5435-01 1 2319 1 2319 NA NA 1 284 #> 3034 TCGA-CV-5436-01 1 584 1 584 NA NA 1 584 #> 3035 TCGA-CV-5439-01 1 546 1 546 NA NA 1 211 #> 3036 TCGA-CV-5440-01 0 3270 0 3270 NA NA 0 3270 #> 3037 TCGA-CV-5441-01 0 2886 0 2886 NA NA 0 2886 #> 3038 TCGA-CV-5442-01 0 2327 0 2327 NA NA 0 2327 #> 3039 TCGA-CV-5443-01 0 2784 0 2784 NA NA 0 2784 #> 3040 TCGA-CV-5444-01 0 2437 0 2437 NA NA 0 2437 #> 3041 TCGA-CV-5966-01 1 545 0 545 NA NA 0 545 #> 3042 TCGA-CV-5970-01 1 406 1 406 NA NA 1 406 #> 3043 TCGA-CV-5971-01 0 701 0 701 NA NA 0 701 #> 3044 TCGA-CV-5973-01 0 2641 0 2641 0 2641 0 2641 #> 3045 TCGA-CV-5976-01 0 1478 0 1478 NA NA 0 1478 #> 3046 TCGA-CV-5977-01 0 1840 0 1840 NA NA 0 1840 #> 3047 TCGA-CV-5978-01 1 215 1 215 NA NA 1 215 #> 3048 TCGA-CV-5979-01 0 1315 0 1315 NA NA 0 1315 #> 3049 TCGA-CV-6003-01 0 1665 0 1665 NA NA 0 1665 #> 3050 TCGA-CV-6436-01 0 1899 0 1899 NA NA 0 1899 #> 3051 TCGA-CV-6441-01 1 292 1 292 NA NA 1 95 #> 3052 TCGA-CV-6933-01 1 2741 0 2741 NA NA 0 2741 #> 3053 TCGA-CV-6933-11 1 2741 0 2741 NA NA 0 2741 #> 3054 TCGA-CV-6934-01 1 65 1 65 NA NA 1 65 #> 3055 TCGA-CV-6934-11 1 65 1 65 NA NA 1 65 #> 3056 TCGA-CV-6935-01 1 295 1 295 NA NA 1 295 #> 3057 TCGA-CV-6935-11 1 295 1 295 NA NA 1 295 #> 3058 TCGA-CV-6936-01 1 166 1 166 NA NA 1 157 #> 3059 TCGA-CV-6936-11 1 166 1 166 NA NA 1 157 #> 3060 TCGA-CV-6937-01 1 624 0 624 NA NA 0 624 #> 3061 TCGA-CV-6938-01 1 144 0 144 NA NA 0 144 #> 3062 TCGA-CV-6938-11 1 144 0 144 NA NA 0 144 #> 3063 TCGA-CV-6939-01 1 666 1 666 NA NA 1 666 #> 3064 TCGA-CV-6939-11 1 666 1 666 NA NA 1 666 #> 3065 TCGA-CV-6940-01 1 804 0 804 0 804 0 804 #> 3066 TCGA-CV-6941-01 1 342 0 342 0 342 0 342 #> 3067 TCGA-CV-6942-01 0 4282 0 4282 0 4282 0 4282 #> 3068 TCGA-CV-6943-01 1 602 1 602 NA NA 1 602 #> 3069 TCGA-CV-6943-11 1 602 1 602 NA NA 1 602 #> 3070 TCGA-CV-6945-01 1 366 1 366 NA NA 1 366 #> 3071 TCGA-CV-6948-01 1 1289 0 1289 NA NA 0 1289 #> 3072 TCGA-CV-6950-01 1 459 1 459 NA NA 1 258 #> 3073 TCGA-CV-6951-01 1 915 1 915 NA NA 1 915 #> 3074 TCGA-CV-6952-01 1 185 0 185 NA NA 0 185 #> 3075 TCGA-CV-6953-01 1 1641 1 1641 1 1521 1 1521 #> 3076 TCGA-CV-6954-01 1 2002 0 2002 NA NA 0 2002 #> 3077 TCGA-CV-6955-01 1 334 1 334 NA NA 1 334 #> 3078 TCGA-CV-6955-11 1 334 1 334 NA NA 1 334 #> 3079 TCGA-CV-6956-01 1 217 1 217 NA NA 1 217 #> 3080 TCGA-CV-6956-11 1 217 1 217 NA NA 1 217 #> 3081 TCGA-CV-6959-01 1 256 1 256 NA NA 1 103 #> 3082 TCGA-CV-6959-11 1 256 1 256 NA NA 1 103 #> 3083 TCGA-CV-6960-01 1 862 0 862 NA NA 0 862 #> 3084 TCGA-CV-6960-11 1 862 0 862 NA NA 0 862 #> 3085 TCGA-CV-6961-01 1 76 1 76 NA NA 1 76 #> 3086 TCGA-CV-6961-11 1 76 1 76 NA NA 1 76 #> 3087 TCGA-CV-6962-01 1 126 0 126 NA NA 0 126 #> 3088 TCGA-CV-6962-11 1 126 0 126 NA NA 0 126 #> 3089 TCGA-CV-7089-01 1 1972 0 1972 NA NA 0 1972 #> 3090 TCGA-CV-7090-01 0 5252 0 5252 0 5252 0 5252 #> 3091 TCGA-CV-7091-01 0 3381 0 3381 NA NA 0 3381 #> 3092 TCGA-CV-7091-11 0 3381 0 3381 NA NA 0 3381 #> 3093 TCGA-CV-7095-01 1 572 0 572 NA NA 0 572 #> 3094 TCGA-CV-7097-01 1 385 1 385 NA NA 1 385 #> 3095 TCGA-CV-7097-11 1 385 1 385 NA NA 1 385 #> 3096 TCGA-CV-7099-01 1 243 0 243 0 243 0 243 #> 3097 TCGA-CV-7100-01 1 274 1 274 NA NA 1 274 #> 3098 TCGA-CV-7101-01 1 160 0 160 NA NA 0 160 #> 3099 TCGA-CV-7101-11 1 160 0 160 NA NA 0 160 #> 3100 TCGA-CV-7102-01 1 56 NA 56 NA NA 0 56 #> 3101 TCGA-CV-7103-01 1 1591 1 1591 NA NA 1 1591 #> 3102 TCGA-CV-7103-11 1 1591 1 1591 NA NA 1 1591 #> 3103 TCGA-CV-7104-01 1 393 0 393 NA NA 0 393 #> 3104 TCGA-CV-7177-01 1 663 1 663 NA NA 1 663 #> 3105 TCGA-CV-7177-11 1 663 1 663 NA NA 1 663 #> 3106 TCGA-CV-7178-01 1 2166 1 2166 NA NA 1 2166 #> 3107 TCGA-CV-7178-11 1 2166 1 2166 NA NA 1 2166 #> 3108 TCGA-CV-7180-01 1 327 1 327 NA NA 1 327 #> 3109 TCGA-CV-7183-01 0 3981 0 3981 0 3981 0 3981 #> 3110 TCGA-CV-7183-11 0 3981 0 3981 0 3981 0 3981 #> 3111 TCGA-CV-7235-01 0 2347 0 2347 0 2347 0 2347 #> 3112 TCGA-CV-7235-11 0 2347 0 2347 0 2347 0 2347 #> 3113 TCGA-CV-7236-01 1 144 0 144 NA NA 0 144 #> 3114 TCGA-CV-7238-01 0 2727 0 2727 0 2727 0 2727 #> 3115 TCGA-CV-7238-11 0 2727 0 2727 0 2727 0 2727 #> 3116 TCGA-CV-7242-01 0 1095 0 1095 NA NA 0 1095 #> 3117 TCGA-CV-7242-11 0 1095 0 1095 NA NA 0 1095 #> 3118 TCGA-CV-7243-01 0 954 0 954 NA NA 0 954 #> 3119 TCGA-CV-7245-01 0 797 0 797 NA NA 0 797 #> 3120 TCGA-CV-7245-11 0 797 0 797 NA NA 0 797 #> 3121 TCGA-CV-7247-01 1 577 1 577 NA NA 1 577 #> 3122 TCGA-CV-7248-01 1 521 0 521 NA NA 0 521 #> 3123 TCGA-CV-7250-01 1 2900 0 2900 NA NA 1 111 #> 3124 TCGA-CV-7250-11 1 2900 0 2900 NA NA 1 111 #> 3125 TCGA-CV-7252-01 1 151 1 151 NA NA 1 151 #> 3126 TCGA-CV-7252-11 1 151 1 151 NA NA 1 151 #> 3127 TCGA-CV-7253-01 1 361 1 361 NA NA 1 361 #> 3128 TCGA-CV-7254-01 1 1459 1 1459 NA NA 1 1459 #> 3129 TCGA-CV-7255-01 1 64 1 64 NA NA 1 64 #> 3130 TCGA-CV-7255-11 1 64 1 64 NA NA 1 64 #> 3131 TCGA-CV-7261-01 0 1512 0 1512 NA NA 0 1512 #> 3132 TCGA-CV-7261-11 0 1512 0 1512 NA NA 0 1512 #> 3133 TCGA-CV-7263-01 1 560 1 560 NA NA 1 560 #> 3134 TCGA-CV-7406-01 1 1748 NA 1748 NA NA 0 1748 #> 3135 TCGA-CV-7406-11 1 1748 NA 1748 NA NA 0 1748 #> 3136 TCGA-CV-7407-01 1 1081 NA 1081 NA NA 0 1081 #> 3137 TCGA-CV-7409-01 1 543 NA 543 NA NA 0 543 #> 3138 TCGA-CV-7410-01 1 6417 1 6417 NA NA 1 6417 #> 3139 TCGA-CV-7411-01 1 2717 NA 2717 NA NA 0 2717 #> 3140 TCGA-CV-7413-01 1 294 NA 294 0 294 0 294 #> 3141 TCGA-CV-7414-01 1 14 NA 14 NA NA 0 14 #> 3142 TCGA-CV-7415-01 1 695 1 695 NA NA 1 695 #> 3143 TCGA-CV-7416-01 1 763 NA 763 NA NA 0 763 #> 3144 TCGA-CV-7416-11 1 763 NA 763 NA NA 0 763 #> 3145 TCGA-CV-7418-01 1 789 0 789 NA NA 1 494 #> 3146 TCGA-CV-7421-01 1 2 NA 2 NA NA 0 2 #> 3147 TCGA-CV-7422-01 1 1037 1 1037 NA NA 1 733 #> 3148 TCGA-CV-7423-01 1 3059 NA 3059 NA NA 0 3059 #> 3149 TCGA-CV-7423-11 1 3059 NA 3059 NA NA 0 3059 #> 3150 TCGA-CV-7424-01 1 453 1 453 NA NA 1 453 #> 3151 TCGA-CV-7424-11 1 453 1 453 NA NA 1 453 #> 3152 TCGA-CV-7425-01 1 1718 1 1718 NA NA 1 1718 #> 3153 TCGA-CV-7425-11 1 1718 1 1718 NA NA 1 1718 #> 3154 TCGA-CV-7427-01 1 4760 0 4760 1 3282 1 3282 #> 3155 TCGA-CV-7428-01 1 1671 1 1671 NA NA 1 1671 #> 3156 TCGA-CV-7429-01 1 107 1 107 NA NA 1 107 #> 3157 TCGA-CV-7430-01 1 495 1 495 NA NA 1 495 #> 3158 TCGA-CV-7432-01 1 2570 1 2570 NA NA 1 2570 #> 3159 TCGA-CV-7432-11 1 2570 1 2570 NA NA 1 2570 #> 3160 TCGA-CV-7433-01 1 601 1 601 NA NA 1 445 #> 3161 TCGA-CV-7434-01 1 218 0 218 NA NA 0 218 #> 3162 TCGA-CV-7434-11 1 218 0 218 NA NA 0 218 #> 3163 TCGA-CV-7435-01 1 4680 0 4680 NA NA 0 4680 #> 3164 TCGA-CV-7437-01 1 506 1 506 NA NA 1 506 #> 3165 TCGA-CV-7437-11 1 506 1 506 NA NA 1 506 #> 3166 TCGA-CV-7438-01 1 194 1 194 NA NA 1 194 #> 3167 TCGA-CV-7438-11 1 194 1 194 NA NA 1 194 #> 3168 TCGA-CV-7440-01 1 675 NA 675 NA NA 0 675 #> 3169 TCGA-CV-7440-11 1 675 NA 675 NA NA 0 675 #> 3170 TCGA-CV-7446-01 1 1093 1 1093 NA NA 1 1093 #> 3171 TCGA-CV-7568-01 1 927 NA 927 NA NA 0 927 #> 3172 TCGA-CV-A45O-01 0 851 0 851 NA NA 0 851 #> 3173 TCGA-CV-A45P-01 0 639 0 639 1 639 1 639 #> 3174 TCGA-CV-A45Q-01 1 5152 0 5152 NA NA 0 5152 #> 3175 TCGA-CV-A45R-01 0 5480 0 5480 0 5480 0 5480 #> 3176 TCGA-CV-A45T-01 1 4856 0 4856 NA NA 0 4856 #> 3177 TCGA-CV-A45U-01 1 1079 1 1079 NA NA 1 1064 #> 3178 TCGA-CV-A45V-01 1 32 NA 32 NA NA 0 32 #> 3179 TCGA-CV-A45W-01 1 1398 0 1398 NA NA 0 1398 #> 3180 TCGA-CV-A45X-01 1 198 0 198 NA NA 0 198 #> 3181 TCGA-CV-A45Y-01 1 2703 0 2703 NA NA 1 2318 #> 3182 TCGA-CV-A45Z-01 1 1466 1 1466 NA NA 1 1466 #> 3183 TCGA-CV-A460-01 1 1838 NA 1838 NA NA 1 1425 #> 3184 TCGA-CV-A461-01 1 2064 0 2064 0 2064 0 2064 #> 3185 TCGA-CV-A463-01 1 23 0 23 NA NA 0 23 #> 3186 TCGA-CV-A464-01 0 1722 0 1722 NA NA 1 28 #> 3187 TCGA-CV-A465-01 1 215 0 215 0 215 0 215 #> 3188 TCGA-CV-A468-01 1 464 0 464 NA NA 0 464 #> 3189 TCGA-CV-A6JD-01 1 182 0 182 NA NA 0 182 #> 3190 TCGA-CV-A6JE-01 0 1075 0 1075 0 1075 0 1075 #> 3191 TCGA-CV-A6JM-01 1 194 0 194 NA NA 1 107 #> 3192 TCGA-CV-A6JN-01 0 906 0 906 0 906 0 906 #> 3193 TCGA-CV-A6JO-01 1 197 1 197 NA NA 1 127 #> 3194 TCGA-CV-A6JT-01 0 852 0 852 0 852 0 852 #> 3195 TCGA-CV-A6JU-01 0 110 0 110 NA NA 0 110 #> 3196 TCGA-CV-A6JY-01 0 646 0 646 NA NA 0 646 #> 3197 TCGA-CV-A6JZ-01 0 714 0 714 NA NA 1 393 #> 3198 TCGA-CV-A6K0-01 0 606 0 606 1 146 1 146 #> 3199 TCGA-CV-A6K1-01 0 685 0 685 NA NA 1 401 #> 3200 TCGA-CV-A6K2-01 1 317 1 317 NA NA 1 134 #> 3201 TCGA-CX-7082-01 1 11 0 11 NA NA 0 11 #> 3202 TCGA-CX-7085-01 0 321 0 321 1 92 1 92 #> 3203 TCGA-CX-7086-01 0 573 0 573 NA NA 0 573 #> 3204 TCGA-CX-7219-01 0 1045 0 1045 NA NA 0 1045 #> 3205 TCGA-CX-A4AQ-01 0 1555 0 1555 NA NA 0 1555 #> 3206 TCGA-D6-6515-01 1 403 0 403 1 195 1 195 #> 3207 TCGA-D6-6516-01 0 773 0 773 0 773 0 773 #> 3208 TCGA-D6-6517-01 0 292 0 292 NA NA 1 161 #> 3209 TCGA-D6-6823-01 0 701 0 701 0 701 0 701 #> 3210 TCGA-D6-6824-01 0 77 0 77 NA NA 0 77 #> 3211 TCGA-D6-6825-01 0 491 0 491 0 491 0 491 #> 3212 TCGA-D6-6826-01 1 348 0 348 NA NA 0 348 #> 3213 TCGA-D6-6827-01 0 568 0 568 0 568 0 568 #> 3214 TCGA-D6-8568-01 0 759 0 759 NA NA 0 759 #> 3215 TCGA-D6-8569-01 0 770 0 770 NA NA 0 770 #> 3216 TCGA-D6-A4Z9-01 0 539 0 539 NA NA 0 539 #> 3217 TCGA-D6-A4ZB-01 0 376 0 376 0 376 0 376 #> 3218 TCGA-D6-A6EK-01 0 875 0 875 NA NA 0 875 #> 3219 TCGA-D6-A6EM-01 0 232 0 232 1 232 1 232 #> 3220 TCGA-D6-A6EN-01 0 687 0 687 0 687 0 687 #> 3221 TCGA-D6-A6EO-01 0 759 0 759 NA NA 0 759 #> 3222 TCGA-D6-A6EP-01 0 424 0 424 0 424 0 424 #> 3223 TCGA-D6-A6EQ-01 0 368 0 368 NA NA 0 368 #> 3224 TCGA-D6-A6ES-01 0 389 0 389 NA NA 0 389 #> 3225 TCGA-D6-A74Q-01 0 710 0 710 NA NA 0 710 #> 3226 TCGA-DQ-5624-01 0 1778 0 1778 NA NA 0 1778 #> 3227 TCGA-DQ-5625-01 1 1133 0 1133 1 1058 1 1058 #> 3228 TCGA-DQ-5629-01 1 941 0 941 NA NA 0 941 #> 3229 TCGA-DQ-5630-01 0 1030 0 1030 0 1030 0 1030 #> 3230 TCGA-DQ-5631-01 1 548 1 548 NA NA 1 447 #> 3231 TCGA-DQ-7588-01 1 427 1 427 NA NA 1 79 #> 3232 TCGA-DQ-7589-01 0 1409 0 1409 NA NA 0 1409 #> 3233 TCGA-DQ-7590-01 0 1413 0 1413 NA NA 0 1413 #> 3234 TCGA-DQ-7591-01 0 622 0 622 NA NA 0 622 #> 3235 TCGA-DQ-7592-01 0 1143 0 1143 NA NA 0 1143 #> 3236 TCGA-DQ-7593-01 0 1224 0 1224 NA NA 0 1224 #> 3237 TCGA-DQ-7594-01 0 1218 0 1218 NA NA 1 1084 #> 3238 TCGA-DQ-7595-01 0 1190 0 1190 0 1190 0 1190 #> 3239 TCGA-DQ-7596-01 0 1265 0 1265 NA NA 1 137 #> 3240 TCGA-F7-7848-01 0 1131 0 1131 NA NA 0 1131 #> 3241 TCGA-F7-8298-01 0 995 0 995 0 995 0 995 #> 3242 TCGA-F7-8489-01 0 658 0 658 0 658 0 658 #> 3243 TCGA-F7-A50I-01 0 92 0 92 NA NA 0 92 #> 3244 TCGA-F7-A50J-01 0 947 0 947 0 947 0 947 #> 3245 TCGA-F7-A61S-01 0 576 0 576 1 213 1 213 #> 3246 TCGA-F7-A61V-01 0 759 0 759 0 759 0 759 #> 3247 TCGA-F7-A61W-01 0 14 0 14 NA NA 0 14 #> 3248 TCGA-F7-A620-01 0 543 0 543 0 543 0 543 #> 3249 TCGA-F7-A622-01 1 359 1 359 NA NA 1 359 #> 3250 TCGA-F7-A623-01 0 616 0 616 NA NA 0 616 #> 3251 TCGA-F7-A624-01 0 378 0 378 0 378 0 378 #> 3252 TCGA-H7-7774-01 0 407 0 407 NA NA 1 252 #> 3253 TCGA-H7-8501-01 0 461 0 461 NA NA 0 461 #> 3254 TCGA-H7-8502-01 0 458 0 458 NA NA 0 458 #> 3255 TCGA-H7-A6C4-01 0 414 0 414 NA NA 1 235 #> 3256 TCGA-H7-A6C4-11 0 414 0 414 NA NA 1 235 #> 3257 TCGA-H7-A6C5-11 0 642 0 642 0 642 0 642 #> 3258 TCGA-H7-A76A-01 0 637 0 637 NA NA 0 637 #> 3259 TCGA-HD-7229-01 0 1027 0 1027 NA NA 1 162 #> 3260 TCGA-HD-7753-01 0 866 0 866 0 866 0 866 #> 3261 TCGA-HD-7754-01 0 783 0 783 NA NA 0 783 #> 3262 TCGA-HD-7831-01 0 667 0 667 NA NA 1 667 #> 3263 TCGA-HD-7832-01 0 836 0 836 NA NA 0 836 #> 3264 TCGA-HD-7917-01 1 836 0 836 0 836 0 836 #> 3265 TCGA-HD-8224-01 1 446 1 446 NA NA 1 171 #> 3266 TCGA-HD-8314-01 0 670 0 670 0 670 0 670 #> 3267 TCGA-HD-8634-01 1 385 0 385 0 385 0 385 #> 3268 TCGA-HD-8635-01 0 695 0 695 0 695 0 695 #> 3269 TCGA-HD-8635-11 0 695 0 695 0 695 0 695 #> 3270 TCGA-HD-A4C1-01 0 11 0 11 NA NA 0 11 #> 3271 TCGA-HD-A633-01 0 421 0 421 NA NA 1 419 #> 3272 TCGA-HD-A634-01 1 130 1 130 NA NA 1 130 #> 3273 TCGA-HD-A6HZ-01 0 111 0 111 NA NA 0 111 #> 3274 TCGA-HD-A6HZ-11 0 111 0 111 NA NA 0 111 #> 3275 TCGA-HD-A6I0-01 0 210 0 210 NA NA 0 210 #> 3276 TCGA-HD-A6I0-11 0 210 0 210 NA NA 0 210 #> 3277 TCGA-HL-7533-01 0 1057 0 1057 NA NA 0 1057 #> 3278 TCGA-IQ-7630-01 0 485 0 485 0 485 0 485 #> 3279 TCGA-IQ-7631-01 0 1172 0 1172 0 1172 0 1172 #> 3280 TCGA-IQ-7632-01 0 441 0 441 NA NA 0 441 #> 3281 TCGA-IQ-A61E-01 0 1147 0 1147 0 1147 0 1147 #> 3282 TCGA-IQ-A61G-01 0 360 0 360 NA NA 1 249 #> 3283 TCGA-IQ-A61H-01 0 1138 0 1138 0 1138 0 1138 #> 3284 TCGA-IQ-A61I-01 1 2 0 2 NA NA 0 2 #> 3285 TCGA-IQ-A61J-01 0 1021 0 1021 NA NA 0 1021 #> 3286 TCGA-IQ-A61O-01 1 421 0 421 NA NA 0 421 #> 3287 TCGA-IQ-A6SG-01 0 579 0 579 0 579 0 579 #> 3288 TCGA-IQ-A6SH-01 0 471 0 471 NA NA 0 471 #> 3289 TCGA-KU-A66S-01 1 406 1 406 1 389 1 389 #> 3290 TCGA-KU-A66T-01 0 552 0 552 NA NA 1 552 #> 3291 TCGA-KU-A6H7-06 0 586 0 586 NA NA 0 586 #> 3292 TCGA-KU-A6H7-01 0 586 0 586 NA NA 0 586 #> 3293 TCGA-KU-A6H8-01 1 327 1 327 NA NA 1 110 #> 3294 TCGA-MT-A51W-01 0 437 0 437 0 437 0 437 #> 3295 TCGA-MT-A51X-01 0 242 0 242 NA NA 0 242 #> 3296 TCGA-MT-A67A-01 0 914 0 914 0 914 0 914 #> 3297 TCGA-MT-A67D-01 0 56 0 56 0 56 0 56 #> 3298 TCGA-MT-A67F-01 0 384 0 384 NA NA 0 384 #> 3299 TCGA-MT-A7BN-01 0 469 0 469 NA NA 1 179 #> 3300 TCGA-MZ-A5BI-01 1 217 NA 217 NA NA 0 217 #> 3301 TCGA-MZ-A6I9-01 1 489 1 489 NA NA 1 246 #> 3302 TCGA-MZ-A7D7-01 0 547 0 547 NA NA 1 339 #> 3303 TCGA-P3-A5Q5-01 0 910 0 910 NA NA 0 910 #> 3304 TCGA-P3-A5Q6-01 1 480 1 480 NA NA 1 280 #> 3305 TCGA-P3-A5QA-01 0 2182 0 2182 1 1601 1 1601 #> 3306 TCGA-P3-A5QE-01 0 1559 0 1559 0 1559 0 1559 #> 3307 TCGA-P3-A5QF-01 1 330 1 330 NA NA 1 140 #> 3308 TCGA-P3-A6SW-01 0 1120 0 1120 NA NA 0 1120 #> 3309 TCGA-P3-A6SX-01 1 1430 0 1430 NA NA 0 1430 #> 3310 TCGA-P3-A6T0-01 0 578 0 578 NA NA 1 365 #> 3311 TCGA-P3-A6T2-01 0 2298 0 2298 NA NA 0 2298 #> 3312 TCGA-P3-A6T3-01 1 577 1 577 NA NA 1 242 #> 3313 TCGA-P3-A6T4-01 1 62 1 62 NA NA 1 62 #> 3314 TCGA-P3-A6T5-01 1 882 1 882 NA NA 1 335 #> 3315 TCGA-P3-A6T6-01 1 395 1 395 NA NA 1 273 #> 3316 TCGA-P3-A6T7-01 1 487 NA 487 NA NA 0 487 #> 3317 TCGA-P3-A6T8-01 0 400 0 400 NA NA 0 400 #> 3318 TCGA-QK-A64Z-01 1 641 1 641 NA NA 1 553 #> 3319 TCGA-QK-A652-01 0 645 0 645 0 645 0 645 #> 3320 TCGA-QK-A6IF-01 0 704 0 704 NA NA 1 502 #> 3321 TCGA-QK-A6IG-01 1 222 1 222 NA NA 1 142 #> 3322 TCGA-QK-A6IH-01 0 653 0 653 NA NA 1 228 #> 3323 TCGA-QK-A6II-01 1 284 1 284 NA NA 1 176 #> 3324 TCGA-QK-A6IJ-01 0 387 0 387 NA NA 0 387 #> 3325 TCGA-QK-A6V9-01 0 833 0 833 0 833 0 833 #> 3326 TCGA-QK-A6VB-01 0 641 0 641 NA NA 1 613 #> 3327 TCGA-QK-A6VC-01 0 600 0 600 NA NA 0 600 #> 3328 TCGA-QK-A8Z7-01 0 392 0 392 NA NA 0 392 #> 3329 TCGA-QK-A8Z8-01 1 171 1 171 NA NA 1 171 #> 3330 TCGA-QK-A8Z9-01 1 449 1 449 NA NA 1 205 #> 3331 TCGA-QK-A8ZA-01 1 371 0 371 NA NA 0 371 #> 3332 TCGA-QK-A8ZB-01 0 542 0 542 NA NA 0 542 #> 3333 TCGA-QK-AA3J-01 0 466 0 466 0 466 0 466 #> 3334 TCGA-QK-AA3K-01 0 253 0 253 NA NA 0 253 #> 3335 TCGA-RS-A6TO-01 1 387 1 387 NA NA 1 338 #> 3336 TCGA-RS-A6TP-01 0 516 0 516 0 516 0 516 #> 3337 TCGA-T2-A6WX-01 1 209 1 209 NA NA 1 209 #> 3338 TCGA-T2-A6WZ-01 1 484 1 484 NA NA 1 229 #> 3339 TCGA-T2-A6X0-01 0 216 0 216 NA NA 0 216 #> 3340 TCGA-T2-A6X2-01 0 987 0 987 0 987 0 987 #> 3341 TCGA-T3-A92M-01 0 417 0 417 NA NA 1 417 #> 3342 TCGA-T3-A92N-01 1 95 1 95 NA NA 1 46 #> 3343 TCGA-TN-A7HI-01 0 412 0 412 NA NA 0 412 #> 3344 TCGA-TN-A7HJ-01 0 403 0 403 NA NA 0 403 #> 3345 TCGA-TN-A7HL-01 0 619 0 619 NA NA 0 619 #> 3346 TCGA-UF-A718-01 0 1971 0 1971 NA NA 0 1971 #> 3347 TCGA-UF-A719-01 0 1663 0 1663 0 1663 0 1663 #> 3348 TCGA-UF-A71A-06 1 86 1 86 NA NA 1 86 #> 3349 TCGA-UF-A71A-01 1 86 1 86 NA NA 1 86 #> 3350 TCGA-UF-A71B-01 0 1506 0 1506 NA NA 0 1506 #> 3351 TCGA-UF-A71D-01 0 1461 0 1461 NA NA 0 1461 #> 3352 TCGA-UF-A71E-01 1 1504 0 1504 NA NA 0 1504 #> 3353 TCGA-UF-A7J9-01 0 1358 0 1358 NA NA 0 1358 #> 3354 TCGA-UF-A7JA-01 0 2265 0 2265 NA NA 0 2265 #> 3355 TCGA-UF-A7JC-01 1 546 1 546 NA NA 1 229 #> 3356 TCGA-UF-A7JD-01 1 739 0 739 NA NA 0 739 #> 3357 TCGA-UF-A7JF-01 0 1686 0 1686 NA NA 0 1686 #> 3358 TCGA-UF-A7JH-01 0 896 0 896 NA NA 0 896 #> 3359 TCGA-UF-A7JJ-01 0 549 0 549 NA NA 0 549 #> 3360 TCGA-UF-A7JK-01 1 424 1 424 NA NA 1 341 #> 3361 TCGA-UF-A7JO-01 1 631 1 631 NA NA 1 525 #> 3362 TCGA-UF-A7JS-01 1 680 1 680 NA NA 1 519 #> 3363 TCGA-UF-A7JT-01 1 993 1 993 NA NA 1 718 #> 3364 TCGA-UF-A7JV-01 1 90 1 90 NA NA 1 55 #> 3365 TCGA-UP-A6WW-01 0 518 0 518 NA NA 0 518 #> 3366 TCGA-WA-A7GZ-01 1 625 0 625 0 625 0 625 #> 3367 TCGA-WA-A7GZ-11 1 625 0 625 0 625 0 625 #> 3368 TCGA-WA-A7H4-01 0 443 0 443 0 443 0 443 #> 3369 TCGA-KL-8323-01 1 1158 1 1158 NA NA 1 758 #> 3370 TCGA-KL-8324-01 0 4676 0 4676 NA NA 0 4676 #> 3371 TCGA-KL-8324-11 0 4676 0 4676 NA NA 0 4676 #> 3372 TCGA-KL-8325-01 1 725 0 725 NA NA 0 725 #> 3373 TCGA-KL-8326-01 0 3322 0 3322 NA NA 0 3322 #> 3374 TCGA-KL-8326-11 0 3322 0 3322 NA NA 0 3322 #> 3375 TCGA-KL-8327-01 0 4169 0 4169 NA NA 0 4169 #> 3376 TCGA-KL-8328-01 0 3127 0 3127 NA NA 0 3127 #> 3377 TCGA-KL-8329-01 0 2752 0 2752 NA NA 0 2752 #> 3378 TCGA-KL-8329-11 0 2752 0 2752 NA NA 0 2752 #> 3379 TCGA-KL-8330-01 0 3304 0 3304 NA NA 0 3304 #> 3380 TCGA-KL-8331-01 0 3010 0 3010 NA NA 0 3010 #> 3381 TCGA-KL-8332-01 0 2582 0 2582 NA NA 0 2582 #> 3382 TCGA-KL-8332-11 0 2582 0 2582 NA NA 0 2582 #> 3383 TCGA-KL-8333-01 0 2991 0 2991 NA NA 0 2991 #> 3384 TCGA-KL-8334-01 0 2949 0 2949 NA NA 0 2949 #> 3385 TCGA-KL-8335-01 0 2815 0 2815 NA NA 0 2815 #> 3386 TCGA-KL-8336-01 1 920 1 920 NA NA 1 47 #> 3387 TCGA-KL-8336-11 1 920 1 920 NA NA 1 47 #> 3388 TCGA-KL-8337-01 0 1364 0 1364 NA NA 0 1364 #> 3389 TCGA-KL-8338-01 0 2633 0 2633 NA NA 0 2633 #> 3390 TCGA-KL-8339-01 1 855 1 855 NA NA 1 64 #> 3391 TCGA-KL-8339-11 1 855 1 855 NA NA 1 64 #> 3392 TCGA-KL-8340-01 0 2024 0 2024 NA NA 0 2024 #> 3393 TCGA-KL-8341-01 1 754 1 754 NA NA 1 175 #> 3394 TCGA-KL-8342-01 0 2248 0 2248 NA NA 0 2248 #> 3395 TCGA-KL-8343-01 1 2172 1 2172 NA NA 1 2172 #> 3396 TCGA-KL-8344-01 0 876 0 876 NA NA 0 876 #> 3397 TCGA-KL-8345-01 0 1665 0 1665 NA NA 0 1665 #> 3398 TCGA-KL-8346-01 0 1897 0 1897 NA NA 0 1897 #> 3399 TCGA-KM-8438-01 0 4622 0 4622 1 2317 1 2317 #> 3400 TCGA-KM-8439-01 0 708 0 708 NA NA 0 708 #> 3401 TCGA-KM-8440-01 0 1366 0 1366 0 1366 0 1366 #> 3402 TCGA-KM-8441-01 0 876 0 876 1 876 1 876 #> 3403 TCGA-KM-8442-01 0 1437 0 1437 NA NA 0 1437 #> 3404 TCGA-KM-8443-01 0 1520 0 1520 0 1520 0 1520 #> 3405 TCGA-KM-8476-01 0 3745 0 3745 0 3745 0 3745 #> 3406 TCGA-KM-8477-01 0 1553 0 1553 0 1553 0 1553 #> 3407 TCGA-KM-8639-01 0 953 0 953 0 953 0 953 #> 3408 TCGA-KN-8418-01 0 3935 0 3935 NA NA 0 3935 #> 3409 TCGA-KN-8419-01 0 714 0 714 0 714 0 714 #> 3410 TCGA-KN-8419-11 0 714 0 714 0 714 0 714 #> 3411 TCGA-KN-8421-01 0 2674 0 2674 NA NA 0 2674 #> 3412 TCGA-KN-8422-01 0 775 0 775 0 775 0 775 #> 3413 TCGA-KN-8422-11 0 775 0 775 0 775 0 775 #> 3414 TCGA-KN-8423-01 0 788 0 788 0 788 0 788 #> 3415 TCGA-KN-8423-11 0 788 0 788 0 788 0 788 #> 3416 TCGA-KN-8424-01 0 1983 0 1983 0 1983 0 1983 #> 3417 TCGA-KN-8424-11 0 1983 0 1983 0 1983 0 1983 #> 3418 TCGA-KN-8425-01 0 3179 0 3179 0 3179 0 3179 #> 3419 TCGA-KN-8425-11 0 3179 0 3179 0 3179 0 3179 #> 3420 TCGA-KN-8426-01 0 108 0 108 NA NA 0 108 #> 3421 TCGA-KN-8426-11 0 108 0 108 NA NA 0 108 #> 3422 TCGA-KN-8427-01 0 30 0 30 NA NA 0 30 #> 3423 TCGA-KN-8427-11 0 30 0 30 NA NA 0 30 #> 3424 TCGA-KN-8428-01 1 1590 1 1590 NA NA 1 478 #> 3425 TCGA-KN-8428-11 1 1590 1 1590 NA NA 1 478 #> 3426 TCGA-KN-8429-01 0 2650 0 2650 1 1989 1 1989 #> 3427 TCGA-KN-8429-11 0 2650 0 2650 1 1989 1 1989 #> 3428 TCGA-KN-8430-01 1 NA 1 NA NA NA 1 NA #> 3429 TCGA-KN-8430-11 1 NA 1 NA NA NA 1 NA #> 3430 TCGA-KN-8431-01 0 588 0 588 NA NA 0 588 #> 3431 TCGA-KN-8431-11 0 588 0 588 NA NA 0 588 #> 3432 TCGA-KN-8432-01 0 76 0 76 0 76 0 76 #> 3433 TCGA-KN-8432-11 0 76 0 76 0 76 0 76 #> 3434 TCGA-KN-8433-01 0 341 0 341 0 341 0 341 #> 3435 TCGA-KN-8433-11 0 341 0 341 0 341 0 341 #> 3436 TCGA-KN-8434-01 0 1797 0 1797 0 1797 0 1797 #> 3437 TCGA-KN-8434-11 0 1797 0 1797 0 1797 0 1797 #> 3438 TCGA-KN-8435-01 0 3498 0 3498 0 3498 0 3498 #> 3439 TCGA-KN-8435-11 0 3498 0 3498 0 3498 0 3498 #> 3440 TCGA-KN-8436-01 0 1288 0 1288 0 1288 0 1288 #> 3441 TCGA-KN-8436-11 0 1288 0 1288 0 1288 0 1288 #> 3442 TCGA-KN-8437-01 0 3068 0 3068 0 3068 0 3068 #> 3443 TCGA-KN-8437-11 0 3068 0 3068 0 3068 0 3068 #> 3444 TCGA-KO-8403-01 0 3208 0 3208 NA NA 0 3208 #> 3445 TCGA-KO-8403-11 0 3208 0 3208 NA NA 0 3208 #> 3446 TCGA-KO-8404-01 1 325 1 325 NA NA 1 148 #> 3447 TCGA-KO-8405-01 0 3056 0 3056 0 3056 0 3056 #> 3448 TCGA-KO-8406-01 0 3145 0 3145 0 3145 0 3145 #> 3449 TCGA-KO-8407-01 0 2820 0 2820 0 2820 0 2820 #> 3450 TCGA-KO-8408-01 1 507 0 507 NA NA 1 46 #> 3451 TCGA-KO-8409-01 0 3180 0 3180 0 3180 0 3180 #> 3452 TCGA-KO-8410-01 0 3136 0 3136 NA NA 0 3136 #> 3453 TCGA-KO-8411-01 0 3958 0 3958 0 3958 0 3958 #> 3454 TCGA-KO-8413-01 0 3038 0 3038 0 3038 0 3038 #> 3455 TCGA-KO-8414-01 0 3212 0 3212 0 3212 0 3212 #> 3456 TCGA-KO-8415-01 0 2939 0 2939 0 2939 0 2939 #> 3457 TCGA-KO-8415-11 0 2939 0 2939 0 2939 0 2939 #> 3458 TCGA-KO-8416-01 0 2752 0 2752 0 2752 0 2752 #> 3459 TCGA-KO-8417-01 0 2815 0 2815 0 2815 0 2815 #> 3460 TCGA-3Z-A93Z-01 0 385 0 385 0 385 0 385 #> 3461 TCGA-6D-AA2E-01 0 362 0 362 NA NA 0 362 #> 3462 TCGA-A3-3306-01 0 1120 0 1120 NA NA 0 1120 #> 3463 TCGA-A3-3307-01 0 1436 0 1436 NA NA 0 1436 #> 3464 TCGA-A3-3308-01 0 16 0 16 NA NA 0 16 #> 3465 TCGA-A3-3311-01 1 1191 0 1191 NA NA 0 1191 #> 3466 TCGA-A3-3313-01 1 735 0 735 NA NA 0 735 #> 3467 TCGA-A3-3316-01 0 1493 0 1493 NA NA 0 1493 #> 3468 TCGA-A3-3317-01 0 1491 0 1491 NA NA 1 560 #> 3469 TCGA-A3-3319-01 0 1130 0 1130 NA NA 0 1130 #> 3470 TCGA-A3-3320-01 0 1508 0 1508 NA NA 0 1508 #> 3471 TCGA-A3-3322-01 0 1478 0 1478 NA NA 0 1478 #> 3472 TCGA-A3-3323-01 0 1106 0 1106 NA NA 0 1106 #> 3473 TCGA-A3-3324-01 0 1186 0 1186 NA NA 0 1186 #> 3474 TCGA-A3-3325-01 1 1170 0 1170 NA NA 0 1170 #> 3475 TCGA-A3-3326-01 0 1137 0 1137 NA NA 0 1137 #> 3476 TCGA-A3-3328-01 0 1385 0 1385 0 1385 0 1385 #> 3477 TCGA-A3-3329-01 0 1624 0 1624 0 1624 0 1624 #> 3478 TCGA-A3-3331-01 0 1485 0 1485 NA NA 0 1485 #> 3479 TCGA-A3-3335-01 0 1886 0 1886 1 1098 1 1098 #> 3480 TCGA-A3-3343-01 0 945 0 945 NA NA 0 945 #> 3481 TCGA-A3-3346-01 1 137 1 137 NA NA 1 114 #> 3482 TCGA-A3-3347-01 1 1610 1 1610 NA NA 1 610 #> 3483 TCGA-A3-3349-01 0 1385 0 1385 NA NA 0 1385 #> 3484 TCGA-A3-3351-01 0 910 0 910 NA NA 0 910 #> 3485 TCGA-A3-3352-01 1 561 0 561 0 561 0 561 #> 3486 TCGA-A3-3357-01 0 2688 0 2688 0 2688 0 2688 #> 3487 TCGA-A3-3358-01 0 1307 0 1307 NA NA 0 1307 #> 3488 TCGA-A3-3358-11 0 1307 0 1307 NA NA 0 1307 #> 3489 TCGA-A3-3359-01 0 2504 0 2504 0 2504 0 2504 #> 3490 TCGA-A3-3362-01 0 1559 0 1559 NA NA 0 1559 #> 3491 TCGA-A3-3363-01 0 319 0 319 NA NA 0 319 #> 3492 TCGA-A3-3365-01 0 873 0 873 NA NA 0 873 #> 3493 TCGA-A3-3367-01 0 2270 0 2270 0 2270 0 2270 #> 3494 TCGA-A3-3370-01 0 2274 0 2274 0 2274 0 2274 #> 3495 TCGA-A3-3372-01 0 735 0 735 NA NA 0 735 #> 3496 TCGA-A3-3373-01 0 1621 0 1621 0 1621 0 1621 #> 3497 TCGA-A3-3374-01 0 1314 0 1314 NA NA 0 1314 #> 3498 TCGA-A3-3376-01 1 1696 0 1696 0 1696 0 1696 #> 3499 TCGA-A3-3378-01 0 630 0 630 NA NA 0 630 #> 3500 TCGA-A3-3380-01 0 567 0 567 NA NA 0 567 #> 3501 TCGA-A3-3382-01 0 574 0 574 NA NA 1 514 #> 3502 TCGA-A3-3383-01 0 861 0 861 NA NA 0 861 #> 3503 TCGA-A3-3385-01 0 1993 0 1993 0 1993 0 1993 #> 3504 TCGA-A3-3387-01 0 617 0 617 NA NA 0 617 #> 3505 TCGA-A3-3387-11 0 617 0 617 NA NA 0 617 #> 3506 TCGA-A3-A6NI-01 0 1018 0 1018 0 1018 0 1018 #> 3507 TCGA-A3-A6NJ-01 0 468 0 468 0 468 0 468 #> 3508 TCGA-A3-A6NN-01 0 3 0 3 0 3 0 3 #> 3509 TCGA-A3-A8CQ-01 0 3 0 3 NA NA 0 3 #> 3510 TCGA-A3-A8OU-01 0 0 0 0 0 0 0 0 #> 3511 TCGA-A3-A8OV-01 0 340 0 340 0 340 0 340 #> 3512 TCGA-A3-A8OW-01 0 323 0 323 0 323 0 323 #> 3513 TCGA-A3-A8OX-01 0 0 0 0 0 0 0 0 #> 3514 TCGA-AK-3425-01 0 3343 0 3343 NA NA 0 3343 #> 3515 TCGA-AK-3426-01 1 885 1 885 NA NA 1 256 #> 3516 TCGA-AK-3427-01 0 3583 0 3583 0 3583 0 3583 #> 3517 TCGA-AK-3428-01 0 3728 0 3728 0 3728 0 3728 #> 3518 TCGA-AK-3429-01 0 3328 0 3328 0 3328 0 3328 #> 3519 TCGA-AK-3431-01 1 2241 0 2241 0 2241 0 2241 #> 3520 TCGA-AK-3433-01 0 3409 0 3409 0 3409 0 3409 #> 3521 TCGA-AK-3434-01 0 2087 0 2087 NA NA 1 1640 #> 3522 TCGA-AK-3436-01 0 3331 0 3331 NA NA 1 1189 #> 3523 TCGA-AK-3440-01 0 2865 0 2865 0 2865 0 2865 #> 3524 TCGA-AK-3443-01 0 1423 0 1423 NA NA 0 1423 #> 3525 TCGA-AK-3444-01 0 1471 0 1471 NA NA 0 1471 #> 3526 TCGA-AK-3445-01 0 2392 0 2392 0 2392 0 2392 #> 3527 TCGA-AK-3447-01 0 1217 0 1217 NA NA 0 1217 #> 3528 TCGA-AK-3450-01 0 1779 0 1779 NA NA 0 1779 #> 3529 TCGA-AK-3451-01 0 2868 0 2868 0 2868 0 2868 #> 3530 TCGA-AK-3453-01 0 2531 0 2531 0 2531 0 2531 #> 3531 TCGA-AK-3454-01 0 874 0 874 NA NA 0 874 #> 3532 TCGA-AK-3455-01 1 683 NA 683 NA NA 0 683 #> 3533 TCGA-AK-3456-01 0 1143 0 1143 NA NA 0 1143 #> 3534 TCGA-AK-3458-01 0 1168 0 1168 NA NA 0 1168 #> 3535 TCGA-AK-3460-01 0 2508 0 2508 0 2508 0 2508 #> 3536 TCGA-AK-3461-01 0 2217 0 2217 0 2217 0 2217 #> 3537 TCGA-AK-3465-01 0 369 0 369 NA NA 0 369 #> 3538 TCGA-AS-3777-01 0 1238 0 1238 NA NA 0 1238 #> 3539 TCGA-AS-3778-01 0 43 0 43 NA NA 0 43 #> 3540 TCGA-B0-4688-01 1 101 1 101 NA NA 1 101 #> 3541 TCGA-B0-4690-01 1 43 1 43 NA NA 1 43 #> 3542 TCGA-B0-4691-01 1 139 1 139 NA NA 1 139 #> 3543 TCGA-B0-4693-01 1 77 0 77 NA NA 0 77 #> 3544 TCGA-B0-4694-01 1 106 0 106 NA NA 0 106 #> 3545 TCGA-B0-4696-01 1 866 1 866 NA NA 1 794 #> 3546 TCGA-B0-4697-01 1 578 1 578 NA NA 1 578 #> 3547 TCGA-B0-4698-01 1 42 1 42 NA NA 1 42 #> 3548 TCGA-B0-4699-01 1 110 NA 110 NA NA 0 110 #> 3549 TCGA-B0-4700-01 1 1980 1 1980 NA NA 1 1980 #> 3550 TCGA-B0-4700-11 1 1980 1 1980 NA NA 1 1980 #> 3551 TCGA-B0-4701-01 1 238 1 238 NA NA 1 238 #> 3552 TCGA-B0-4703-01 1 182 1 182 NA NA 1 182 #> 3553 TCGA-B0-4706-01 1 65 0 65 NA NA 0 65 #> 3554 TCGA-B0-4707-01 1 600 1 600 NA NA 1 600 #> 3555 TCGA-B0-4710-01 0 1755 0 1755 0 1755 0 1755 #> 3556 TCGA-B0-4712-01 1 1337 1 1337 NA NA 1 1337 #> 3557 TCGA-B0-4712-11 1 1337 1 1337 NA NA 1 1337 #> 3558 TCGA-B0-4713-01 1 202 1 202 NA NA 1 202 #> 3559 TCGA-B0-4714-01 1 99 1 99 NA NA 1 99 #> 3560 TCGA-B0-4718-01 0 1778 0 1778 NA NA 1 768 #> 3561 TCGA-B0-4810-01 1 478 1 478 NA NA 1 205 #> 3562 TCGA-B0-4811-01 1 1417 1 1417 NA NA 1 458 #> 3563 TCGA-B0-4813-01 1 18 0 18 NA NA 0 18 #> 3564 TCGA-B0-4814-01 1 168 1 168 NA NA 1 168 #> 3565 TCGA-B0-4815-01 1 1588 1 1588 NA NA 1 1588 #> 3566 TCGA-B0-4816-01 1 1371 1 1371 NA NA 1 1371 #> 3567 TCGA-B0-4817-01 1 1019 0 1019 NA NA 0 1019 #> 3568 TCGA-B0-4818-01 1 510 1 510 NA NA 1 127 #> 3569 TCGA-B0-4821-01 1 1230 1 1230 NA NA 1 1230 #> 3570 TCGA-B0-4822-01 1 1111 1 1111 NA NA 1 1111 #> 3571 TCGA-B0-4823-01 1 454 0 454 NA NA 0 454 #> 3572 TCGA-B0-4824-01 1 1657 0 1657 NA NA 0 1657 #> 3573 TCGA-B0-4827-01 1 885 1 885 NA NA 1 668 #> 3574 TCGA-B0-4828-01 1 307 1 307 NA NA 1 307 #> 3575 TCGA-B0-4833-01 1 2386 1 2386 NA NA 1 2386 #> 3576 TCGA-B0-4834-01 1 2090 0 2090 NA NA 0 2090 #> 3577 TCGA-B0-4836-01 1 1238 1 1238 NA NA 1 1238 #> 3578 TCGA-B0-4837-01 1 1378 1 1378 NA NA 1 1208 #> 3579 TCGA-B0-4838-01 1 834 0 834 NA NA 0 834 #> 3580 TCGA-B0-4839-01 1 1639 0 1639 NA NA 0 1639 #> 3581 TCGA-B0-4841-01 1 204 1 204 NA NA 1 108 #> 3582 TCGA-B0-4842-01 1 1724 1 1724 NA NA 1 250 #> 3583 TCGA-B0-4843-01 1 320 1 320 NA NA 1 320 #> 3584 TCGA-B0-4844-01 1 313 1 313 NA NA 1 62 #> 3585 TCGA-B0-4845-01 1 1986 1 1986 NA NA 1 748 #> 3586 TCGA-B0-4846-01 1 1200 1 1200 NA NA 1 163 #> 3587 TCGA-B0-4847-01 1 793 NA 793 NA NA 0 793 #> 3588 TCGA-B0-4848-01 1 883 1 883 NA NA 1 494 #> 3589 TCGA-B0-4849-01 1 69 1 69 NA NA 1 4 #> 3590 TCGA-B0-4852-01 1 1121 1 1121 NA NA 1 860 #> 3591 TCGA-B0-4945-01 1 2145 0 2145 NA NA 0 2145 #> 3592 TCGA-B0-5075-01 1 637 0 637 NA NA 0 637 #> 3593 TCGA-B0-5077-01 1 1317 0 1317 NA NA 0 1317 #> 3594 TCGA-B0-5080-01 1 342 1 342 NA NA 1 103 #> 3595 TCGA-B0-5081-01 1 362 1 362 NA NA 1 213 #> 3596 TCGA-B0-5083-01 1 1045 1 1045 NA NA 1 1045 #> 3597 TCGA-B0-5084-01 1 222 1 222 NA NA 1 65 #> 3598 TCGA-B0-5085-01 1 770 0 770 NA NA 0 770 #> 3599 TCGA-B0-5088-01 1 563 0 563 NA NA 0 563 #> 3600 TCGA-B0-5092-01 1 459 1 459 NA NA 1 459 #> 3601 TCGA-B0-5094-01 1 333 1 333 NA NA 1 75 #> 3602 TCGA-B0-5095-01 1 245 0 245 NA NA 0 245 #> 3603 TCGA-B0-5096-01 1 68 0 68 NA NA 0 68 #> 3604 TCGA-B0-5097-01 0 665 0 665 NA NA 1 359 #> 3605 TCGA-B0-5098-01 1 1584 NA 1584 NA NA 0 1584 #> 3606 TCGA-B0-5099-01 1 485 NA 485 NA NA 0 485 #> 3607 TCGA-B0-5100-01 1 1913 1 1913 NA NA 1 1426 #> 3608 TCGA-B0-5102-01 1 2764 NA 2764 NA NA 1 2734 #> 3609 TCGA-B0-5104-01 1 2752 0 2752 NA NA 0 2752 #> 3610 TCGA-B0-5106-01 1 1598 0 1598 NA NA 0 1598 #> 3611 TCGA-B0-5107-01 1 927 1 927 NA NA 1 549 #> 3612 TCGA-B0-5108-01 0 1782 0 1782 0 1782 0 1782 #> 3613 TCGA-B0-5109-01 1 587 1 587 NA NA 1 70 #> 3614 TCGA-B0-5110-01 0 2009 0 2009 0 2009 0 2009 #> 3615 TCGA-B0-5113-01 0 1175 0 1175 0 1175 0 1175 #> 3616 TCGA-B0-5115-01 0 1604 0 1604 NA NA 1 75 #> 3617 TCGA-B0-5116-01 0 1274 0 1274 1 1129 1 1129 #> 3618 TCGA-B0-5117-01 0 1608 0 1608 0 1608 0 1608 #> 3619 TCGA-B0-5119-01 0 1552 0 1552 0 1552 0 1552 #> 3620 TCGA-B0-5120-01 0 1169 0 1169 0 1169 0 1169 #> 3621 TCGA-B0-5121-01 0 1485 0 1485 0 1485 0 1485 #> 3622 TCGA-B0-5399-01 0 1411 0 1411 0 1411 0 1411 #> 3623 TCGA-B0-5400-01 0 1733 0 1733 0 1733 0 1733 #> 3624 TCGA-B0-5402-01 0 1290 0 1290 NA NA 1 444 #> 3625 TCGA-B0-5402-11 0 1290 0 1290 NA NA 1 444 #> 3626 TCGA-B0-5690-01 0 3392 0 3392 NA NA 0 3392 #> 3627 TCGA-B0-5690-11 0 3392 0 3392 NA NA 0 3392 #> 3628 TCGA-B0-5691-01 0 3431 0 3431 NA NA 1 3250 #> 3629 TCGA-B0-5691-11 0 3431 0 3431 NA NA 1 3250 #> 3630 TCGA-B0-5692-01 0 3944 0 3944 0 3944 0 3944 #> 3631 TCGA-B0-5693-01 0 4074 0 4074 0 4074 0 4074 #> 3632 TCGA-B0-5694-01 1 480 1 480 NA NA 1 288 #> 3633 TCGA-B0-5694-11 1 480 1 480 NA NA 1 288 #> 3634 TCGA-B0-5695-01 0 2150 0 2150 0 2150 0 2150 #> 3635 TCGA-B0-5696-01 0 2609 0 2609 1 1717 1 1717 #> 3636 TCGA-B0-5696-11 0 2609 0 2609 1 1717 1 1717 #> 3637 TCGA-B0-5697-01 0 2630 0 2630 0 2630 0 2630 #> 3638 TCGA-B0-5697-11 0 2630 0 2630 0 2630 0 2630 #> 3639 TCGA-B0-5698-01 0 3631 0 3631 0 3631 0 3631 #> 3640 TCGA-B0-5699-01 0 3841 0 3841 1 94 1 94 #> 3641 TCGA-B0-5699-11 0 3841 0 3841 1 94 1 94 #> 3642 TCGA-B0-5700-01 0 1790 0 1790 0 1790 0 1790 #> 3643 TCGA-B0-5701-01 0 2461 0 2461 1 224 1 224 #> 3644 TCGA-B0-5701-11 0 2461 0 2461 1 224 1 224 #> 3645 TCGA-B0-5702-01 0 2172 0 2172 0 2172 0 2172 #> 3646 TCGA-B0-5703-01 0 2246 0 2246 0 2246 0 2246 #> 3647 TCGA-B0-5703-11 0 2246 0 2246 0 2246 0 2246 #> 3648 TCGA-B0-5705-01 0 4537 0 4537 1 842 1 842 #> 3649 TCGA-B0-5705-11 0 4537 0 4537 1 842 1 842 #> 3650 TCGA-B0-5706-01 0 3205 0 3205 0 3205 0 3205 #> 3651 TCGA-B0-5706-11 0 3205 0 3205 0 3205 0 3205 #> 3652 TCGA-B0-5707-01 0 3744 0 3744 0 3744 0 3744 #> 3653 TCGA-B0-5709-01 0 3974 0 3974 0 3974 0 3974 #> 3654 TCGA-B0-5709-11 0 3974 0 3974 0 3974 0 3974 #> 3655 TCGA-B0-5710-01 0 2430 0 2430 NA NA 1 1441 #> 3656 TCGA-B0-5711-01 0 3989 0 3989 1 3766 1 3766 #> 3657 TCGA-B0-5711-11 0 3989 0 3989 1 3766 1 3766 #> 3658 TCGA-B0-5712-01 0 2722 0 2722 NA NA 1 725 #> 3659 TCGA-B0-5712-11 0 2722 0 2722 NA NA 1 725 #> 3660 TCGA-B0-5713-01 0 2782 0 2782 0 2782 0 2782 #> 3661 TCGA-B0-5812-01 0 3834 0 3834 0 3834 0 3834 #> 3662 TCGA-B2-3923-01 0 992 0 992 0 992 0 992 #> 3663 TCGA-B2-3924-01 0 1092 0 1092 0 1092 0 1092 #> 3664 TCGA-B2-4098-01 1 51 0 51 NA NA 0 51 #> 3665 TCGA-B2-4099-01 0 972 0 972 0 972 0 972 #> 3666 TCGA-B2-4101-01 0 648 0 648 0 648 0 648 #> 3667 TCGA-B2-4102-01 0 952 0 952 0 952 0 952 #> 3668 TCGA-B2-5633-01 0 963 0 963 0 963 0 963 #> 3669 TCGA-B2-5635-01 0 755 0 755 0 755 0 755 #> 3670 TCGA-B2-5636-01 0 919 0 919 0 919 0 919 #> 3671 TCGA-B2-5636-11 0 919 0 919 0 919 0 919 #> 3672 TCGA-B2-5639-01 1 1003 1 1003 NA NA 1 163 #> 3673 TCGA-B2-5641-01 0 656 0 656 0 656 0 656 #> 3674 TCGA-B2-5641-11 0 656 0 656 0 656 0 656 #> 3675 TCGA-B2-A4SR-01 0 507 0 507 1 266 1 266 #> 3676 TCGA-B4-5377-01 0 365 0 365 NA NA 0 365 #> 3677 TCGA-B4-5378-01 0 175 0 175 NA NA 0 175 #> 3678 TCGA-B4-5832-01 0 155 0 155 0 155 0 155 #> 3679 TCGA-B4-5834-01 0 38 0 38 NA NA 0 38 #> 3680 TCGA-B4-5835-01 0 16 0 16 NA NA 0 16 #> 3681 TCGA-B4-5836-01 0 141 0 141 NA NA 0 141 #> 3682 TCGA-B4-5838-01 0 166 0 166 NA NA 0 166 #> 3683 TCGA-B4-5843-01 0 11 0 11 NA NA 0 11 #> 3684 TCGA-B4-5844-01 0 7 0 7 NA NA 0 7 #> 3685 TCGA-B8-4143-01 1 709 1 709 NA NA 1 709 #> 3686 TCGA-B8-4146-01 0 511 0 511 0 511 0 511 #> 3687 TCGA-B8-4148-01 0 1520 0 1520 0 1520 0 1520 #> 3688 TCGA-B8-4151-01 0 1299 0 1299 0 1299 0 1299 #> 3689 TCGA-B8-4153-01 0 762 0 762 NA NA 1 223 #> 3690 TCGA-B8-4154-01 0 1380 0 1380 0 1380 0 1380 #> 3691 TCGA-B8-4619-01 0 523 0 523 0 523 0 523 #> 3692 TCGA-B8-4619-11 0 523 0 523 0 523 0 523 #> 3693 TCGA-B8-4620-01 0 777 0 777 1 604 1 604 #> 3694 TCGA-B8-4620-11 0 777 0 777 1 604 1 604 #> 3695 TCGA-B8-4621-01 0 788 0 788 0 788 0 788 #> 3696 TCGA-B8-4622-01 0 1525 0 1525 NA NA 1 1227 #> 3697 TCGA-B8-4622-11 0 1525 0 1525 NA NA 1 1227 #> 3698 TCGA-B8-5158-01 0 1218 0 1218 0 1218 0 1218 #> 3699 TCGA-B8-5159-01 0 722 0 722 0 722 0 722 #> 3700 TCGA-B8-5162-01 0 36 0 36 NA NA 0 36 #> 3701 TCGA-B8-5163-01 0 822 0 822 0 822 0 822 #> 3702 TCGA-B8-5164-01 0 26 0 26 NA NA 0 26 #> 3703 TCGA-B8-5165-01 0 737 0 737 0 737 0 737 #> 3704 TCGA-B8-5545-01 0 1525 0 1525 0 1525 0 1525 #> 3705 TCGA-B8-5546-01 0 505 0 505 NA NA 0 505 #> 3706 TCGA-B8-5549-01 0 194 0 194 0 194 0 194 #> 3707 TCGA-B8-5549-11 0 194 0 194 0 194 0 194 #> 3708 TCGA-B8-5550-01 0 1476 0 1476 1 694 1 694 #> 3709 TCGA-B8-5551-01 0 16 0 16 NA NA 0 16 #> 3710 TCGA-B8-5552-01 0 1046 0 1046 0 1046 0 1046 #> 3711 TCGA-B8-5552-11 0 1046 0 1046 0 1046 0 1046 #> 3712 TCGA-B8-5553-01 0 435 0 435 NA NA 0 435 #> 3713 TCGA-B8-A54D-01 0 830 0 830 0 830 0 830 #> 3714 TCGA-B8-A54E-01 0 909 0 909 0 909 0 909 #> 3715 TCGA-B8-A54F-01 0 519 0 519 0 519 0 519 #> 3716 TCGA-B8-A54G-01 0 53 0 53 0 53 0 53 #> 3717 TCGA-B8-A54H-01 0 256 0 256 0 256 0 256 #> 3718 TCGA-B8-A54I-01 0 150 0 150 0 150 0 150 #> 3719 TCGA-B8-A54J-01 0 528 0 528 0 528 0 528 #> 3720 TCGA-B8-A54K-01 0 469 0 469 0 469 0 469 #> 3721 TCGA-B8-A7U6-01 0 495 0 495 0 495 0 495 #> 3722 TCGA-B8-A8YJ-01 0 431 0 431 0 431 0 431 #> 3723 TCGA-BP-4158-01 0 3377 0 3377 NA NA 0 3377 #> 3724 TCGA-BP-4159-01 1 2601 1 2601 NA NA 1 2352 #> 3725 TCGA-BP-4160-01 0 2881 0 2881 NA NA 0 2881 #> 3726 TCGA-BP-4161-01 0 2746 0 2746 NA NA 1 2685 #> 3727 TCGA-BP-4162-01 0 3074 0 3074 NA NA 0 3074 #> 3728 TCGA-BP-4163-01 0 2839 0 2839 NA NA 0 2839 #> 3729 TCGA-BP-4164-01 1 992 0 992 NA NA 0 992 #> 3730 TCGA-BP-4165-01 0 3037 0 3037 NA NA 1 1049 #> 3731 TCGA-BP-4166-01 0 13 0 13 NA NA 0 13 #> 3732 TCGA-BP-4167-01 0 2718 0 2718 NA NA 0 2718 #> 3733 TCGA-BP-4169-01 1 701 1 701 NA NA 1 78 #> 3734 TCGA-BP-4170-01 1 2343 0 2343 NA NA 0 2343 #> 3735 TCGA-BP-4173-01 0 1893 0 1893 NA NA 0 1893 #> 3736 TCGA-BP-4174-01 0 1879 0 1879 NA NA 0 1879 #> 3737 TCGA-BP-4176-01 0 1955 0 1955 NA NA 0 1955 #> 3738 TCGA-BP-4177-01 0 1670 0 1670 NA NA 0 1670 #> 3739 TCGA-BP-4325-01 0 2964 0 2964 NA NA 0 2964 #> 3740 TCGA-BP-4326-01 1 1625 1 1625 NA NA 1 958 #> 3741 TCGA-BP-4327-01 1 109 0 109 NA NA 0 109 #> 3742 TCGA-BP-4329-01 1 845 1 845 NA NA 1 134 #> 3743 TCGA-BP-4330-01 0 1888 0 1888 NA NA 0 1888 #> 3744 TCGA-BP-4331-01 1 2454 0 2454 NA NA 0 2454 #> 3745 TCGA-BP-4332-01 0 1133 0 1133 NA NA 0 1133 #> 3746 TCGA-BP-4334-01 1 645 1 645 NA NA 1 442 #> 3747 TCGA-BP-4335-01 1 475 1 475 NA NA 1 160 #> 3748 TCGA-BP-4337-01 1 2 0 2 NA NA 0 2 #> 3749 TCGA-BP-4338-01 0 2859 0 2859 NA NA 1 1757 #> 3750 TCGA-BP-4340-01 1 562 0 562 NA NA 0 562 #> 3751 TCGA-BP-4341-01 1 1589 1 1589 NA NA 1 1589 #> 3752 TCGA-BP-4342-01 1 2256 1 2256 NA NA 1 240 #> 3753 TCGA-BP-4343-01 1 1912 1 1912 NA NA 1 330 #> 3754 TCGA-BP-4344-01 0 1666 0 1666 NA NA 0 1666 #> 3755 TCGA-BP-4345-01 0 1516 0 1516 NA NA 0 1516 #> 3756 TCGA-BP-4346-01 1 1493 0 1493 NA NA 0 1493 #> 3757 TCGA-BP-4347-01 0 1367 0 1367 NA NA 0 1367 #> 3758 TCGA-BP-4349-01 0 372 0 372 NA NA 0 372 #> 3759 TCGA-BP-4351-01 0 970 0 970 NA NA 1 873 #> 3760 TCGA-BP-4352-01 1 344 1 344 NA NA 1 13 #> 3761 TCGA-BP-4353-01 1 375 0 375 NA NA 0 375 #> 3762 TCGA-BP-4355-01 1 953 NA 953 NA NA 0 953 #> 3763 TCGA-BP-4756-01 0 374 0 374 NA NA 0 374 #> 3764 TCGA-BP-4758-01 0 2208 0 2208 NA NA 0 2208 #> 3765 TCGA-BP-4759-01 0 2372 0 2372 NA NA 0 2372 #> 3766 TCGA-BP-4760-01 0 2361 0 2361 NA NA 1 1457 #> 3767 TCGA-BP-4761-01 0 182 0 182 NA NA 0 182 #> 3768 TCGA-BP-4762-01 1 1343 0 1343 NA NA 0 1343 #> 3769 TCGA-BP-4763-01 1 1270 0 1270 NA NA 0 1270 #> 3770 TCGA-BP-4765-01 0 2184 0 2184 NA NA 0 2184 #> 3771 TCGA-BP-4766-01 0 1462 0 1462 NA NA 0 1462 #> 3772 TCGA-BP-4768-01 0 400 0 400 NA NA 0 400 #> 3773 TCGA-BP-4769-01 0 1876 0 1876 NA NA 0 1876 #> 3774 TCGA-BP-4770-01 1 329 1 329 NA NA 1 169 #> 3775 TCGA-BP-4771-01 1 162 1 162 NA NA 1 23 #> 3776 TCGA-BP-4774-01 0 1885 0 1885 NA NA 0 1885 #> 3777 TCGA-BP-4775-01 0 1843 0 1843 NA NA 0 1843 #> 3778 TCGA-BP-4776-01 0 411 0 411 NA NA 0 411 #> 3779 TCGA-BP-4777-01 0 1731 0 1731 NA NA 0 1731 #> 3780 TCGA-BP-4781-01 0 2080 0 2080 NA NA 0 2080 #> 3781 TCGA-BP-4782-01 0 354 0 354 NA NA 0 354 #> 3782 TCGA-BP-4784-01 0 1854 0 1854 NA NA 0 1854 #> 3783 TCGA-BP-4787-01 1 480 1 480 NA NA 1 259 #> 3784 TCGA-BP-4789-01 0 1489 0 1489 NA NA 0 1489 #> 3785 TCGA-BP-4790-01 1 1111 0 1111 NA NA 0 1111 #> 3786 TCGA-BP-4795-01 0 620 0 620 NA NA 0 620 #> 3787 TCGA-BP-4797-01 0 1107 0 1107 NA NA 0 1107 #> 3788 TCGA-BP-4798-01 1 334 1 334 NA NA 1 334 #> 3789 TCGA-BP-4799-01 1 1133 1 1133 NA NA 1 352 #> 3790 TCGA-BP-4801-01 0 1124 0 1124 NA NA 0 1124 #> 3791 TCGA-BP-4803-01 0 204 0 204 NA NA 0 204 #> 3792 TCGA-BP-4804-01 0 1459 0 1459 NA NA 1 295 #> 3793 TCGA-BP-4807-01 0 211 0 211 NA NA 0 211 #> 3794 TCGA-BP-4959-01 0 2660 0 2660 NA NA 0 2660 #> 3795 TCGA-BP-4960-01 0 2172 0 2172 NA NA 0 2172 #> 3796 TCGA-BP-4961-01 0 1935 0 1935 NA NA 0 1935 #> 3797 TCGA-BP-4962-01 0 1785 0 1785 NA NA 0 1785 #> 3798 TCGA-BP-4963-01 0 1834 0 1834 NA NA 0 1834 #> 3799 TCGA-BP-4964-01 0 1862 0 1862 NA NA 0 1862 #> 3800 TCGA-BP-4965-01 0 1871 0 1871 NA NA 0 1871 #> 3801 TCGA-BP-4967-01 0 205 0 205 NA NA 0 205 #> 3802 TCGA-BP-4968-01 0 1746 0 1746 NA NA 0 1746 #> 3803 TCGA-BP-4969-01 0 1794 0 1794 NA NA 0 1794 #> 3804 TCGA-BP-4970-01 0 433 0 433 NA NA 0 433 #> 3805 TCGA-BP-4971-01 0 1487 0 1487 NA NA 0 1487 #> 3806 TCGA-BP-4972-01 0 1502 0 1502 NA NA 0 1502 #> 3807 TCGA-BP-4973-01 0 1384 0 1384 NA NA 0 1384 #> 3808 TCGA-BP-4974-01 1 211 1 211 NA NA 1 35 #> 3809 TCGA-BP-4975-01 0 1433 0 1433 NA NA 0 1433 #> 3810 TCGA-BP-4976-01 0 1632 0 1632 NA NA 0 1632 #> 3811 TCGA-BP-4977-01 0 454 0 454 NA NA 0 454 #> 3812 TCGA-BP-4981-01 1 1097 0 1097 NA NA 0 1097 #> 3813 TCGA-BP-4982-01 0 1014 0 1014 NA NA 0 1014 #> 3814 TCGA-BP-4983-01 0 1413 0 1413 NA NA 0 1413 #> 3815 TCGA-BP-4985-01 1 952 1 952 NA NA 1 205 #> 3816 TCGA-BP-4986-01 0 785 0 785 NA NA 0 785 #> 3817 TCGA-BP-4987-01 0 1124 0 1124 NA NA 0 1124 #> 3818 TCGA-BP-4988-01 1 828 0 828 NA NA 0 828 #> 3819 TCGA-BP-4989-01 0 118 0 118 NA NA 0 118 #> 3820 TCGA-BP-4991-01 0 1413 0 1413 NA NA 0 1413 #> 3821 TCGA-BP-4992-01 0 501 0 501 NA NA 0 501 #> 3822 TCGA-BP-4993-01 0 177 0 177 NA NA 0 177 #> 3823 TCGA-BP-4994-01 0 1308 0 1308 NA NA 0 1308 #> 3824 TCGA-BP-4995-01 0 1371 0 1371 NA NA 0 1371 #> 3825 TCGA-BP-4998-01 0 932 0 932 NA NA 0 932 #> 3826 TCGA-BP-4999-01 0 1266 0 1266 NA NA 0 1266 #> 3827 TCGA-BP-5000-01 0 563 0 563 NA NA 0 563 #> 3828 TCGA-BP-5001-01 0 1177 0 1177 NA NA 0 1177 #> 3829 TCGA-BP-5004-01 0 1126 0 1126 NA NA 0 1126 #> 3830 TCGA-BP-5006-01 0 840 0 840 NA NA 0 840 #> 3831 TCGA-BP-5007-01 0 1140 0 1140 NA NA 0 1140 #> 3832 TCGA-BP-5008-01 0 1071 0 1071 NA NA 0 1071 #> 3833 TCGA-BP-5009-01 1 1092 1 1092 NA NA 1 324 #> 3834 TCGA-BP-5010-01 1 878 1 878 NA NA 1 582 #> 3835 TCGA-BP-5168-01 1 1463 0 1463 NA NA 0 1463 #> 3836 TCGA-BP-5169-01 0 193 0 193 NA NA 0 193 #> 3837 TCGA-BP-5170-01 0 2412 0 2412 NA NA 0 2412 #> 3838 TCGA-BP-5173-01 1 62 0 62 NA NA 0 62 #> 3839 TCGA-BP-5174-01 0 2257 0 2257 NA NA 0 2257 #> 3840 TCGA-BP-5175-01 0 932 0 932 NA NA 0 932 #> 3841 TCGA-BP-5176-01 1 1590 0 1590 NA NA 0 1590 #> 3842 TCGA-BP-5177-01 0 293 0 293 NA NA 0 293 #> 3843 TCGA-BP-5178-01 1 1912 1 1912 NA NA 1 396 #> 3844 TCGA-BP-5180-01 0 2263 0 2263 NA NA 0 2263 #> 3845 TCGA-BP-5181-01 0 1495 0 1495 NA NA 0 1495 #> 3846 TCGA-BP-5182-01 0 1165 0 1165 NA NA 0 1165 #> 3847 TCGA-BP-5183-01 0 1291 0 1291 NA NA 1 485 #> 3848 TCGA-BP-5184-01 0 1133 0 1133 NA NA 0 1133 #> 3849 TCGA-BP-5185-01 0 1132 0 1132 NA NA 1 736 #> 3850 TCGA-BP-5186-01 0 693 0 693 NA NA 0 693 #> 3851 TCGA-BP-5187-01 0 406 0 406 NA NA 0 406 #> 3852 TCGA-BP-5189-01 1 822 1 822 NA NA 1 634 #> 3853 TCGA-BP-5190-01 0 1011 0 1011 NA NA 0 1011 #> 3854 TCGA-BP-5191-01 0 967 0 967 NA NA 0 967 #> 3855 TCGA-BP-5192-01 0 714 0 714 NA NA 0 714 #> 3856 TCGA-BP-5194-01 0 408 0 408 NA NA 0 408 #> 3857 TCGA-BP-5195-01 0 749 0 749 NA NA 0 749 #> 3858 TCGA-BP-5196-01 0 1018 0 1018 NA NA 0 1018 #> 3859 TCGA-BP-5198-01 0 603 0 603 NA NA 0 603 #> 3860 TCGA-BP-5199-01 0 1355 0 1355 NA NA 0 1355 #> 3861 TCGA-BP-5200-01 0 1063 0 1063 NA NA 0 1063 #> 3862 TCGA-BP-5201-01 0 951 0 951 NA NA 1 NA #> 3863 TCGA-BP-5202-01 0 29 0 29 NA NA 0 29 #> 3864 TCGA-CJ-4634-01 0 3498 0 3498 0 3498 0 3498 #> 3865 TCGA-CJ-4635-01 0 1416 0 1416 NA NA 0 1416 #> 3866 TCGA-CJ-4636-01 0 1924 0 1924 NA NA 0 1924 #> 3867 TCGA-CJ-4637-01 1 2227 1 2227 NA NA 1 1821 #> 3868 TCGA-CJ-4638-01 1 431 1 431 NA NA 1 70 #> 3869 TCGA-CJ-4639-01 0 3229 0 3229 0 3229 0 3229 #> 3870 TCGA-CJ-4640-01 0 3480 0 3480 0 3480 0 3480 #> 3871 TCGA-CJ-4641-01 1 1661 1 1661 NA NA 1 NA #> 3872 TCGA-CJ-4642-01 0 3205 0 3205 0 3205 0 3205 #> 3873 TCGA-CJ-4643-01 0 1793 0 1793 NA NA 0 1793 #> 3874 TCGA-CJ-4644-01 1 336 1 336 NA NA 1 93 #> 3875 TCGA-CJ-4868-01 1 646 1 646 NA NA 1 37 #> 3876 TCGA-CJ-4869-01 0 2554 0 2554 NA NA 1 1754 #> 3877 TCGA-CJ-4870-01 0 1498 0 1498 NA NA 0 1498 #> 3878 TCGA-CJ-4871-01 0 2423 0 2423 NA NA 1 169 #> 3879 TCGA-CJ-4872-01 0 1435 0 1435 NA NA 0 1435 #> 3880 TCGA-CJ-4873-01 0 2259 0 2259 NA NA 0 2259 #> 3881 TCGA-CJ-4874-01 0 2283 0 2283 NA NA 0 2283 #> 3882 TCGA-CJ-4875-01 1 3554 1 3554 NA NA 1 531 #> 3883 TCGA-CJ-4876-01 0 1955 0 1955 NA NA 0 1955 #> 3884 TCGA-CJ-4878-01 0 2186 0 2186 NA NA 0 2186 #> 3885 TCGA-CJ-4881-01 0 2014 0 2014 NA NA 1 1881 #> 3886 TCGA-CJ-4882-01 0 1883 0 1883 NA NA 0 1883 #> 3887 TCGA-CJ-4884-01 0 1759 0 1759 NA NA 0 1759 #> 3888 TCGA-CJ-4885-01 0 3451 0 3451 NA NA 1 2041 #> 3889 TCGA-CJ-4886-01 0 1952 0 1952 NA NA 0 1952 #> 3890 TCGA-CJ-4887-01 1 932 1 932 NA NA 1 322 #> 3891 TCGA-CJ-4888-01 1 1567 1 1567 NA NA 1 608 #> 3892 TCGA-CJ-4889-01 0 1946 0 1946 NA NA 0 1946 #> 3893 TCGA-CJ-4890-01 0 3519 0 3519 NA NA 1 70 #> 3894 TCGA-CJ-4891-01 1 819 0 819 NA NA 0 819 #> 3895 TCGA-CJ-4892-01 0 1521 0 1521 NA NA 0 1521 #> 3896 TCGA-CJ-4893-01 0 750 0 750 NA NA 0 750 #> 3897 TCGA-CJ-4894-01 1 841 1 841 NA NA 1 158 #> 3898 TCGA-CJ-4895-01 1 1200 1 1200 NA NA 1 61 #> 3899 TCGA-CJ-4897-01 0 3341 0 3341 1 1423 1 1423 #> 3900 TCGA-CJ-4899-01 0 1528 0 1528 NA NA 0 1528 #> 3901 TCGA-CJ-4900-01 1 1714 1 1714 NA NA 1 1714 #> 3902 TCGA-CJ-4901-01 0 1450 0 1450 NA NA 0 1450 #> 3903 TCGA-CJ-4902-01 0 1520 0 1520 NA NA 0 1520 #> 3904 TCGA-CJ-4903-01 0 1560 0 1560 NA NA 0 1560 #> 3905 TCGA-CJ-4904-01 0 3302 0 3302 NA NA 1 278 #> 3906 TCGA-CJ-4905-01 0 1496 0 1496 NA NA 0 1496 #> 3907 TCGA-CJ-4907-01 0 1499 0 1499 NA NA 0 1499 #> 3908 TCGA-CJ-4908-01 0 1531 0 1531 NA NA 0 1531 #> 3909 TCGA-CJ-4912-01 0 1657 0 1657 NA NA 0 1657 #> 3910 TCGA-CJ-4916-01 0 1373 0 1373 NA NA 0 1373 #> 3911 TCGA-CJ-4918-01 1 93 1 93 NA NA 1 33 #> 3912 TCGA-CJ-4920-01 1 139 0 139 NA NA 0 139 #> 3913 TCGA-CJ-4923-01 1 572 1 572 NA NA 1 25 #> 3914 TCGA-CJ-5671-01 0 3987 0 3987 0 3987 0 3987 #> 3915 TCGA-CJ-5672-01 1 2190 0 2190 NA NA 0 2190 #> 3916 TCGA-CJ-5672-11 1 2190 0 2190 NA NA 0 2190 #> 3917 TCGA-CJ-5675-01 0 3936 0 3936 1 900 1 900 #> 3918 TCGA-CJ-5676-01 0 4067 0 4067 1 2219 1 2219 #> 3919 TCGA-CJ-5676-11 0 4067 0 4067 1 2219 1 2219 #> 3920 TCGA-CJ-5677-01 1 782 1 782 NA NA 1 288 #> 3921 TCGA-CJ-5677-11 1 782 1 782 NA NA 1 288 #> 3922 TCGA-CJ-5678-01 1 574 1 574 NA NA 1 399 #> 3923 TCGA-CJ-5678-11 1 574 1 574 NA NA 1 399 #> 3924 TCGA-CJ-5679-01 1 679 1 679 NA NA 1 595 #> 3925 TCGA-CJ-5679-11 1 679 1 679 NA NA 1 595 #> 3926 TCGA-CJ-5680-01 1 768 1 768 NA NA 1 153 #> 3927 TCGA-CJ-5680-11 1 768 1 768 NA NA 1 153 #> 3928 TCGA-CJ-5681-01 1 552 1 552 NA NA 1 17 #> 3929 TCGA-CJ-5681-11 1 552 1 552 NA NA 1 17 #> 3930 TCGA-CJ-5682-01 0 3736 0 3736 NA NA 1 55 #> 3931 TCGA-CJ-5683-01 0 1889 0 1889 NA NA 0 1889 #> 3932 TCGA-CJ-5684-01 0 2231 0 2231 NA NA 0 2231 #> 3933 TCGA-CJ-5686-01 0 2038 0 2038 NA NA 0 2038 #> 3934 TCGA-CJ-5689-01 1 1620 0 1620 NA NA 0 1620 #> 3935 TCGA-CJ-5689-11 1 1620 0 1620 NA NA 0 1620 #> 3936 TCGA-CJ-6027-01 1 3615 0 3615 0 3615 0 3615 #> 3937 TCGA-CJ-6028-01 1 1625 1 1625 NA NA 1 137 #> 3938 TCGA-CJ-6030-01 1 2299 0 2299 NA NA 0 2299 #> 3939 TCGA-CJ-6030-11 1 2299 0 2299 NA NA 0 2299 #> 3940 TCGA-CJ-6031-01 0 1906 0 1906 NA NA 0 1906 #> 3941 TCGA-CJ-6032-01 0 3639 0 3639 0 3639 0 3639 #> 3942 TCGA-CJ-6033-01 1 224 1 224 NA NA 1 144 #> 3943 TCGA-CJ-6033-11 1 224 1 224 NA NA 1 144 #> 3944 TCGA-CW-5580-01 1 1964 NA 1964 NA NA 0 1964 #> 3945 TCGA-CW-5580-11 1 1964 NA 1964 NA NA 0 1964 #> 3946 TCGA-CW-5581-01 0 2799 0 2799 NA NA 0 2799 #> 3947 TCGA-CW-5581-11 0 2799 0 2799 NA NA 0 2799 #> 3948 TCGA-CW-5583-01 0 2489 0 2489 NA NA 0 2489 #> 3949 TCGA-CW-5584-01 1 164 NA 164 NA NA 1 102 #> 3950 TCGA-CW-5584-11 1 164 NA 164 NA NA 1 102 #> 3951 TCGA-CW-5585-01 0 2609 0 2609 NA NA 0 2609 #> 3952 TCGA-CW-5585-11 0 2609 0 2609 NA NA 0 2609 #> 3953 TCGA-CW-5587-01 0 2226 0 2226 NA NA 1 2003 #> 3954 TCGA-CW-5587-11 0 2226 0 2226 NA NA 1 2003 #> 3955 TCGA-CW-5588-01 0 2017 0 2017 NA NA 0 2017 #> 3956 TCGA-CW-5589-01 0 2378 0 2378 NA NA 0 2378 #> 3957 TCGA-CW-5589-11 0 2378 0 2378 NA NA 0 2378 #> 3958 TCGA-CW-5590-01 1 1075 NA 1075 NA NA 1 672 #> 3959 TCGA-CW-5591-01 0 2271 0 2271 NA NA 0 2271 #> 3960 TCGA-CW-5591-11 0 2271 0 2271 NA NA 0 2271 #> 3961 TCGA-CW-6087-01 1 41 0 41 NA NA 0 41 #> 3962 TCGA-CW-6087-11 1 41 0 41 NA NA 0 41 #> 3963 TCGA-CW-6088-01 0 3222 0 3222 NA NA 0 3222 #> 3964 TCGA-CW-6088-11 0 3222 0 3222 NA NA 0 3222 #> 3965 TCGA-CW-6090-01 0 2552 0 2552 NA NA 1 2780 #> 3966 TCGA-CW-6090-11 0 2552 0 2552 NA NA 1 2780 #> 3967 TCGA-CW-6093-01 0 3146 0 3146 NA NA 0 3146 #> 3968 TCGA-CW-6097-01 1 571 1 571 NA NA 1 457 #> 3969 TCGA-CZ-4853-01 0 774 0 774 NA NA 0 774 #> 3970 TCGA-CZ-4854-01 1 1404 0 1404 NA NA 0 1404 #> 3971 TCGA-CZ-4856-01 0 18 0 18 NA NA 0 18 #> 3972 TCGA-CZ-4857-01 1 1432 1 1432 NA NA 1 188 #> 3973 TCGA-CZ-4858-01 1 2105 1 2105 NA NA 1 597 #> 3974 TCGA-CZ-4859-01 0 1787 0 1787 NA NA 0 1787 #> 3975 TCGA-CZ-4860-01 1 206 1 206 NA NA 1 206 #> 3976 TCGA-CZ-4861-01 1 446 1 446 NA NA 1 446 #> 3977 TCGA-CZ-4862-01 0 3271 0 3271 NA NA 0 3271 #> 3978 TCGA-CZ-4863-01 0 1928 0 1928 NA NA 0 1928 #> 3979 TCGA-CZ-4863-11 0 1928 0 1928 NA NA 0 1928 #> 3980 TCGA-CZ-4864-01 1 2830 0 2830 NA NA 0 2830 #> 3981 TCGA-CZ-4864-11 1 2830 0 2830 NA NA 0 2830 #> 3982 TCGA-CZ-4865-01 1 166 0 166 NA NA 0 166 #> 3983 TCGA-CZ-4865-11 1 166 0 166 NA NA 0 166 #> 3984 TCGA-CZ-4866-01 0 3267 0 3267 NA NA 0 3267 #> 3985 TCGA-CZ-5451-01 0 1929 0 1929 NA NA 0 1929 #> 3986 TCGA-CZ-5451-11 0 1929 0 1929 NA NA 0 1929 #> 3987 TCGA-CZ-5452-01 0 1789 0 1789 NA NA 0 1789 #> 3988 TCGA-CZ-5452-11 0 1789 0 1789 NA NA 0 1789 #> 3989 TCGA-CZ-5453-01 1 2419 NA 2419 NA NA 0 2419 #> 3990 TCGA-CZ-5453-11 1 2419 NA 2419 NA NA 0 2419 #> 3991 TCGA-CZ-5454-01 1 722 1 722 NA NA 1 423 #> 3992 TCGA-CZ-5454-11 1 722 1 722 NA NA 1 423 #> 3993 TCGA-CZ-5455-01 1 561 1 561 NA NA 1 561 #> 3994 TCGA-CZ-5455-11 1 561 1 561 NA NA 1 561 #> 3995 TCGA-CZ-5456-01 0 2422 0 2422 NA NA 1 951 #> 3996 TCGA-CZ-5456-11 0 2422 0 2422 NA NA 1 951 #> 3997 TCGA-CZ-5457-01 0 2754 0 2754 NA NA 1 174 #> 3998 TCGA-CZ-5457-11 0 2754 0 2754 NA NA 1 174 #> 3999 TCGA-CZ-5458-01 0 2789 0 2789 NA NA 0 2789 #> 4000 TCGA-CZ-5458-11 0 2789 0 2789 NA NA 0 2789 #> 4001 TCGA-CZ-5459-01 0 1683 0 1683 NA NA 0 1683 #> 4002 TCGA-CZ-5460-01 0 2873 0 2873 NA NA 0 2873 #> 4003 TCGA-CZ-5461-01 1 330 1 330 NA NA 1 48 #> 4004 TCGA-CZ-5461-11 1 330 1 330 NA NA 1 48 #> 4005 TCGA-CZ-5462-01 1 311 1 311 NA NA 1 311 #> 4006 TCGA-CZ-5462-11 1 311 1 311 NA NA 1 311 #> 4007 TCGA-CZ-5463-01 0 662 0 662 NA NA 0 662 #> 4008 TCGA-CZ-5463-11 0 662 0 662 NA NA 0 662 #> 4009 TCGA-CZ-5464-01 0 2128 0 2128 NA NA 0 2128 #> 4010 TCGA-CZ-5465-01 1 2564 0 2564 NA NA 0 2564 #> 4011 TCGA-CZ-5465-11 1 2564 0 2564 NA NA 0 2564 #> 4012 TCGA-CZ-5466-01 0 685 0 685 NA NA 0 685 #> 4013 TCGA-CZ-5466-11 0 685 0 685 NA NA 0 685 #> 4014 TCGA-CZ-5467-01 1 73 1 73 NA NA 1 62 #> 4015 TCGA-CZ-5467-11 1 73 1 73 NA NA 1 62 #> 4016 TCGA-CZ-5468-01 1 59 1 59 NA NA 1 59 #> 4017 TCGA-CZ-5468-11 1 59 1 59 NA NA 1 59 #> 4018 TCGA-CZ-5469-01 1 946 1 946 NA NA 1 110 #> 4019 TCGA-CZ-5469-11 1 946 1 946 NA NA 1 110 #> 4020 TCGA-CZ-5470-01 0 386 0 386 NA NA 0 386 #> 4021 TCGA-CZ-5470-11 0 386 0 386 NA NA 0 386 #> 4022 TCGA-CZ-5982-01 0 2439 0 2439 NA NA 0 2439 #> 4023 TCGA-CZ-5982-11 0 2439 0 2439 NA NA 0 2439 #> 4024 TCGA-CZ-5984-01 0 2067 0 2067 NA NA 0 2067 #> 4025 TCGA-CZ-5984-11 0 2067 0 2067 NA NA 0 2067 #> 4026 TCGA-CZ-5985-01 0 1997 0 1997 NA NA 0 1997 #> 4027 TCGA-CZ-5985-11 0 1997 0 1997 NA NA 0 1997 #> 4028 TCGA-CZ-5986-01 0 373 0 373 NA NA 0 373 #> 4029 TCGA-CZ-5986-11 0 373 0 373 NA NA 0 373 #> 4030 TCGA-CZ-5987-01 1 445 1 445 NA NA 1 377 #> 4031 TCGA-CZ-5987-11 1 445 1 445 NA NA 1 377 #> 4032 TCGA-CZ-5988-01 0 693 0 693 NA NA 0 693 #> 4033 TCGA-CZ-5988-11 0 693 0 693 NA NA 0 693 #> 4034 TCGA-CZ-5989-01 0 1905 0 1905 NA NA 0 1905 #> 4035 TCGA-CZ-5989-11 0 1905 0 1905 NA NA 0 1905 #> 4036 TCGA-DV-5565-01 0 1329 0 1329 NA NA 0 1329 #> 4037 TCGA-DV-5566-01 0 1398 0 1398 NA NA 0 1398 #> 4038 TCGA-DV-5567-01 0 2004 0 2004 1 2004 1 2004 #> 4039 TCGA-DV-5568-01 0 370 0 370 NA NA 0 370 #> 4040 TCGA-DV-5569-01 0 355 0 355 NA NA 0 355 #> 4041 TCGA-DV-5573-01 0 1130 0 1130 NA NA 0 1130 #> 4042 TCGA-DV-5574-01 0 2016 0 2016 1 357 1 357 #> 4043 TCGA-DV-5575-01 0 1729 0 1729 NA NA 0 1729 #> 4044 TCGA-DV-5576-01 1 727 1 727 NA NA 1 727 #> 4045 TCGA-DV-A4VX-01 1 1626 1 1626 NA NA 1 1626 #> 4046 TCGA-DV-A4VZ-01 0 365 0 365 0 365 0 365 #> 4047 TCGA-DV-A4W0-05 0 2470 0 2470 NA NA 1 2008 #> 4048 TCGA-DV-A4W0-01 0 2470 0 2470 NA NA 1 2008 #> 4049 TCGA-EU-5904-01 0 551 0 551 NA NA 0 551 #> 4050 TCGA-EU-5905-01 0 119 0 119 NA NA 0 119 #> 4051 TCGA-EU-5906-01 0 206 0 206 NA NA 0 206 #> 4052 TCGA-EU-5907-01 0 127 0 127 NA NA 0 127 #> 4053 TCGA-G6-A5PC-01 1 242 1 242 NA NA 1 242 #> 4054 TCGA-G6-A8L6-01 1 313 1 313 NA NA 1 304 #> 4055 TCGA-G6-A8L7-01 0 2133 0 2133 0 2133 0 2133 #> 4056 TCGA-G6-A8L8-01 1 1091 0 1091 0 1091 0 1091 #> 4057 TCGA-GK-A6C7-01 0 61 0 61 0 61 0 61 #> 4058 TCGA-MM-A563-01 0 591 0 591 0 591 0 591 #> 4059 TCGA-MM-A564-01 0 607 0 607 0 607 0 607 #> 4060 TCGA-MM-A84U-01 0 700 0 700 0 700 0 700 #> 4061 TCGA-MW-A4EC-01 0 498 0 498 0 498 0 498 #> 4062 TCGA-T7-A92I-01 0 356 0 356 0 356 0 356 #> 4063 TCGA-2K-A9WE-01 0 214 0 214 0 214 0 214 #> 4064 TCGA-2Z-A9J1-01 0 2298 0 2298 0 2298 0 2298 #> 4065 TCGA-2Z-A9J2-01 0 1795 0 1795 0 1795 0 1795 #> 4066 TCGA-2Z-A9J3-01 1 1771 1 1771 NA NA 1 790 #> 4067 TCGA-2Z-A9J5-01 0 3050 0 3050 NA NA 0 3050 #> 4068 TCGA-2Z-A9J6-01 0 1731 0 1731 NA NA 0 1731 #> 4069 TCGA-2Z-A9J7-01 1 139 1 139 NA NA 1 96 #> 4070 TCGA-2Z-A9J8-01 0 2790 0 2790 1 506 1 506 #> 4071 TCGA-2Z-A9J9-01 0 2294 0 2294 0 2294 0 2294 #> 4072 TCGA-2Z-A9JD-01 0 1060 0 1060 NA NA 0 1060 #> 4073 TCGA-2Z-A9JE-01 0 1728 0 1728 0 1728 0 1728 #> 4074 TCGA-2Z-A9JG-01 0 1662 0 1662 0 1662 0 1662 #> 4075 TCGA-2Z-A9JI-01 0 1567 0 1567 1 286 1 286 #> 4076 TCGA-2Z-A9JJ-01 0 1213 0 1213 0 1213 0 1213 #> 4077 TCGA-2Z-A9JK-01 0 1186 0 1186 NA NA 1 324 #> 4078 TCGA-2Z-A9JL-01 0 1006 0 1006 0 1006 0 1006 #> 4079 TCGA-2Z-A9JM-01 0 934 0 934 NA NA 0 934 #> 4080 TCGA-2Z-A9JN-01 0 740 0 740 0 740 0 740 #> 4081 TCGA-2Z-A9JO-01 0 949 0 949 0 949 0 949 #> 4082 TCGA-2Z-A9JP-01 0 893 0 893 0 893 0 893 #> 4083 TCGA-2Z-A9JQ-01 0 778 0 778 NA NA 1 600 #> 4084 TCGA-2Z-A9JR-01 0 161 0 161 NA NA 0 161 #> 4085 TCGA-2Z-A9JS-01 1 492 0 492 0 492 0 492 #> 4086 TCGA-2Z-A9JT-01 0 684 0 684 0 684 0 684 #> 4087 TCGA-4A-A93W-01 0 4 0 4 0 4 0 4 #> 4088 TCGA-4A-A93X-01 0 390 0 390 NA NA 0 390 #> 4089 TCGA-4A-A93Y-01 0 352 0 352 0 352 0 352 #> 4090 TCGA-5P-A9JU-01 0 373 0 373 0 373 0 373 #> 4091 TCGA-5P-A9JV-01 0 2043 0 2043 0 2043 0 2043 #> 4092 TCGA-5P-A9JW-01 0 3241 0 3241 1 3228 1 3228 #> 4093 TCGA-5P-A9JY-01 1 1508 0 1508 0 1508 0 1508 #> 4094 TCGA-5P-A9JZ-01 0 2744 0 2744 0 2744 0 2744 #> 4095 TCGA-5P-A9K0-01 0 677 0 677 NA NA 0 677 #> 4096 TCGA-5P-A9K2-01 0 2392 0 2392 0 2392 0 2392 #> 4097 TCGA-5P-A9K3-01 1 471 1 471 NA NA 1 17 #> 4098 TCGA-5P-A9K4-01 0 2184 0 2184 0 2184 0 2184 #> 4099 TCGA-5P-A9K6-01 0 1914 0 1914 0 1914 0 1914 #> 4100 TCGA-5P-A9K8-01 0 1309 0 1309 0 1309 0 1309 #> 4101 TCGA-5P-A9K9-01 1 589 1 589 1 548 1 548 #> 4102 TCGA-5P-A9KA-01 0 395 0 395 0 395 0 395 #> 4103 TCGA-5P-A9KC-01 0 377 0 377 0 377 0 377 #> 4104 TCGA-5P-A9KE-01 0 824 0 824 0 824 0 824 #> 4105 TCGA-5P-A9KF-01 0 845 0 845 NA NA 1 728 #> 4106 TCGA-5P-A9KH-01 0 2051 0 2051 0 2051 0 2051 #> 4107 TCGA-A4-7286-01 0 554 0 554 0 554 0 554 #> 4108 TCGA-A4-7287-01 1 597 1 597 1 234 1 234 #> 4109 TCGA-A4-7288-01 0 1857 0 1857 0 1857 0 1857 #> 4110 TCGA-A4-7583-01 0 3 0 3 NA NA 0 3 #> 4111 TCGA-A4-7584-01 0 650 0 650 0 650 0 650 #> 4112 TCGA-A4-7585-01 1 1070 0 1070 0 1070 0 1070 #> 4113 TCGA-A4-7732-01 0 582 0 582 0 582 0 582 #> 4114 TCGA-A4-7734-01 0 27 0 27 NA NA 0 27 #> 4115 TCGA-A4-7828-01 0 238 0 238 0 238 0 238 #> 4116 TCGA-A4-7915-01 0 7 0 7 NA NA 0 7 #> 4117 TCGA-A4-7997-01 0 927 0 927 NA NA 0 927 #> 4118 TCGA-A4-8098-01 0 896 0 896 0 896 0 896 #> 4119 TCGA-A4-8310-01 0 780 0 780 0 780 0 780 #> 4120 TCGA-A4-8311-01 0 729 0 729 0 729 0 729 #> 4121 TCGA-A4-8312-01 0 708 0 708 0 708 0 708 #> 4122 TCGA-A4-8515-01 0 709 0 709 0 709 0 709 #> 4123 TCGA-A4-8516-01 0 23 0 23 NA NA 0 23 #> 4124 TCGA-A4-8517-01 0 597 0 597 0 597 0 597 #> 4125 TCGA-A4-8630-01 0 436 0 436 0 436 0 436 #> 4126 TCGA-A4-A48D-01 0 379 0 379 0 379 0 379 #> 4127 TCGA-A4-A4ZT-01 0 516 0 516 0 516 0 516 #> 4128 TCGA-A4-A4ZT-11 0 516 0 516 0 516 0 516 #> 4129 TCGA-A4-A57E-01 1 258 1 258 NA NA 1 258 #> 4130 TCGA-A4-A57E-11 1 258 1 258 NA NA 1 258 #> 4131 TCGA-A4-A5DU-01 0 496 0 496 0 496 0 496 #> 4132 TCGA-A4-A5XZ-01 0 479 0 479 0 479 0 479 #> 4133 TCGA-A4-A5Y0-01 0 252 0 252 0 252 0 252 #> 4134 TCGA-A4-A5Y1-01 1 395 1 395 1 296 1 296 #> 4135 TCGA-A4-A6HP-01 0 379 0 379 0 379 0 379 #> 4136 TCGA-A4-A772-01 0 0 0 0 NA NA 0 0 #> 4137 TCGA-A4-A7UZ-01 0 0 0 0 NA NA 0 0 #> 4138 TCGA-AL-3466-01 1 293 1 293 NA NA 1 138 #> 4139 TCGA-AL-3467-01 0 2135 0 2135 0 2135 0 2135 #> 4140 TCGA-AL-3468-01 1 2331 0 2331 0 2331 0 2331 #> 4141 TCGA-AL-3471-01 1 1500 0 1500 NA NA 0 1500 #> 4142 TCGA-AL-3472-01 0 2029 0 2029 0 2029 0 2029 #> 4143 TCGA-AL-3473-01 0 1906 0 1906 0 1906 0 1906 #> 4144 TCGA-AL-7173-01 0 2060 0 2060 NA NA 1 332 #> 4145 TCGA-AL-A5DJ-01 1 1498 1 1498 NA NA 1 1498 #> 4146 TCGA-AT-A5NU-01 0 67 0 67 NA NA 0 67 #> 4147 TCGA-B1-5398-01 0 1251 0 1251 0 1251 0 1251 #> 4148 TCGA-B1-7332-01 0 1141 0 1141 0 1141 0 1141 #> 4149 TCGA-B1-A47M-01 0 659 0 659 NA NA 1 408 #> 4150 TCGA-B1-A47N-01 0 1110 0 1110 0 1110 0 1110 #> 4151 TCGA-B1-A47O-01 0 842 0 842 0 842 0 842 #> 4152 TCGA-B1-A654-01 0 616 0 616 0 616 0 616 #> 4153 TCGA-B1-A655-01 0 510 0 510 0 510 0 510 #> 4154 TCGA-B1-A656-01 0 618 0 618 0 618 0 618 #> 4155 TCGA-B1-A657-01 0 641 0 641 0 641 0 641 #> 4156 TCGA-B3-3925-01 0 1029 0 1029 0 1029 0 1029 #> 4157 TCGA-B3-3926-01 0 883 0 883 0 883 0 883 #> 4158 TCGA-B3-4103-01 0 930 0 930 0 930 0 930 #> 4159 TCGA-B3-4104-01 0 1049 0 1049 NA NA 0 1049 #> 4160 TCGA-B3-8121-01 0 379 0 379 0 379 0 379 #> 4161 TCGA-B3-A6W5-01 0 309 0 309 0 309 0 309 #> 4162 TCGA-B9-4113-01 1 1536 0 1536 NA NA 0 1536 #> 4163 TCGA-B9-4114-01 0 857 0 857 NA NA 1 637 #> 4164 TCGA-B9-4115-01 0 803 0 803 NA NA 0 803 #> 4165 TCGA-B9-4115-11 0 803 0 803 NA NA 0 803 #> 4166 TCGA-B9-4116-01 0 627 0 627 NA NA 0 627 #> 4167 TCGA-B9-4117-01 0 14 0 14 NA NA 0 14 #> 4168 TCGA-B9-4617-01 0 35 0 35 NA NA 0 35 #> 4169 TCGA-B9-5155-01 0 665 0 665 0 665 0 665 #> 4170 TCGA-B9-5156-01 0 1338 0 1338 0 1338 0 1338 #> 4171 TCGA-B9-7268-01 0 671 0 671 0 671 0 671 #> 4172 TCGA-B9-A44B-01 0 361 0 361 NA NA 0 361 #> 4173 TCGA-B9-A5W7-01 0 585 0 585 1 564 1 564 #> 4174 TCGA-B9-A5W8-01 0 524 0 524 0 524 0 524 #> 4175 TCGA-B9-A5W9-01 0 5 0 5 0 5 0 5 #> 4176 TCGA-B9-A69E-01 0 452 0 452 0 452 0 452 #> 4177 TCGA-B9-A8YH-01 0 532 0 532 0 532 0 532 #> 4178 TCGA-B9-A8YI-01 0 374 0 374 0 374 0 374 #> 4179 TCGA-BQ-5875-01 0 2639 0 2639 NA NA 0 2639 #> 4180 TCGA-BQ-5875-11 0 2639 0 2639 NA NA 0 2639 #> 4181 TCGA-BQ-5876-01 0 586 0 586 NA NA 0 586 #> 4182 TCGA-BQ-5877-01 1 270 1 270 NA NA 1 127 #> 4183 TCGA-BQ-5877-11 1 270 1 270 NA NA 1 127 #> 4184 TCGA-BQ-5878-01 0 1938 0 1938 NA NA 1 1022 #> 4185 TCGA-BQ-5878-11 0 1938 0 1938 NA NA 1 1022 #> 4186 TCGA-BQ-5879-01 1 697 1 697 NA NA 1 130 #> 4187 TCGA-BQ-5879-11 1 697 1 697 NA NA 1 130 #> 4188 TCGA-BQ-5880-01 1 1314 1 1314 NA NA 1 972 #> 4189 TCGA-BQ-5881-01 0 1454 0 1454 NA NA 0 1454 #> 4190 TCGA-BQ-5882-01 1 658 1 658 NA NA 1 340 #> 4191 TCGA-BQ-5882-11 1 658 1 658 NA NA 1 340 #> 4192 TCGA-BQ-5883-01 0 1242 0 1242 NA NA 0 1242 #> 4193 TCGA-BQ-5884-01 0 792 0 792 NA NA 0 792 #> 4194 TCGA-BQ-5884-11 0 792 0 792 NA NA 0 792 #> 4195 TCGA-BQ-5885-01 0 921 0 921 NA NA 0 921 #> 4196 TCGA-BQ-5886-01 0 792 0 792 NA NA 0 792 #> 4197 TCGA-BQ-5887-01 0 771 0 771 NA NA 0 771 #> 4198 TCGA-BQ-5887-11 0 771 0 771 NA NA 0 771 #> 4199 TCGA-BQ-5888-01 0 403 0 403 NA NA 0 403 #> 4200 TCGA-BQ-5888-11 0 403 0 403 NA NA 0 403 #> 4201 TCGA-BQ-5889-01 1 329 1 329 NA NA 1 NA #> 4202 TCGA-BQ-5890-01 0 233 0 233 NA NA 0 233 #> 4203 TCGA-BQ-5890-11 0 233 0 233 NA NA 0 233 #> 4204 TCGA-BQ-5891-01 0 29 0 29 NA NA 0 29 #> 4205 TCGA-BQ-5891-11 0 29 0 29 NA NA 0 29 #> 4206 TCGA-BQ-5892-01 0 364 0 364 NA NA 0 364 #> 4207 TCGA-BQ-5893-01 1 241 1 241 NA NA 1 188 #> 4208 TCGA-BQ-5894-01 0 84 0 84 NA NA 0 84 #> 4209 TCGA-BQ-5894-11 0 84 0 84 NA NA 0 84 #> 4210 TCGA-BQ-7044-01 0 3760 0 3760 NA NA 0 3760 #> 4211 TCGA-BQ-7044-11 0 3760 0 3760 NA NA 0 3760 #> 4212 TCGA-BQ-7045-01 1 1468 0 1468 NA NA 0 1468 #> 4213 TCGA-BQ-7045-11 1 1468 0 1468 NA NA 0 1468 #> 4214 TCGA-BQ-7046-01 0 2948 0 2948 NA NA 0 2948 #> 4215 TCGA-BQ-7046-11 0 2948 0 2948 NA NA 0 2948 #> 4216 TCGA-BQ-7048-01 0 2839 0 2839 NA NA 1 229 #> 4217 TCGA-BQ-7049-01 1 1364 0 1364 NA NA 0 1364 #> 4218 TCGA-BQ-7050-01 0 1864 0 1864 NA NA 0 1864 #> 4219 TCGA-BQ-7051-01 0 1533 0 1533 NA NA 0 1533 #> 4220 TCGA-BQ-7051-11 0 1533 0 1533 NA NA 0 1533 #> 4221 TCGA-BQ-7053-01 0 1516 0 1516 NA NA 0 1516 #> 4222 TCGA-BQ-7055-01 0 799 0 799 NA NA 0 799 #> 4223 TCGA-BQ-7055-11 0 799 0 799 NA NA 0 799 #> 4224 TCGA-BQ-7056-01 0 612 0 612 NA NA 1 143 #> 4225 TCGA-BQ-7058-01 1 343 1 343 NA NA 1 50 #> 4226 TCGA-BQ-7059-01 0 232 0 232 NA NA 0 232 #> 4227 TCGA-BQ-7059-11 0 232 0 232 NA NA 0 232 #> 4228 TCGA-BQ-7060-01 0 214 0 214 NA NA 0 214 #> 4229 TCGA-BQ-7061-01 0 218 0 218 NA NA 0 218 #> 4230 TCGA-BQ-7061-11 0 218 0 218 NA NA 0 218 #> 4231 TCGA-BQ-7062-01 0 116 0 116 NA NA 0 116 #> 4232 TCGA-DW-5560-01 0 1486 0 1486 0 1486 0 1486 #> 4233 TCGA-DW-5561-01 0 414 0 414 NA NA 0 414 #> 4234 TCGA-DW-7834-01 0 3950 0 3950 NA NA 0 3950 #> 4235 TCGA-DW-7836-01 0 1093 0 1093 NA NA 0 1093 #> 4236 TCGA-DW-7837-01 0 1142 0 1142 NA NA 0 1142 #> 4237 TCGA-DW-7838-01 0 744 0 744 NA NA 1 380 #> 4238 TCGA-DW-7839-01 0 419 0 419 NA NA 0 419 #> 4239 TCGA-DW-7840-01 0 114 0 114 NA NA 0 114 #> 4240 TCGA-DW-7841-01 0 445 0 445 NA NA 0 445 #> 4241 TCGA-DW-7842-01 0 92 0 92 NA NA 0 92 #> 4242 TCGA-DW-7963-01 0 1240 0 1240 0 1240 0 1240 #> 4243 TCGA-DZ-6131-01 0 2429 0 2429 NA NA 0 2429 #> 4244 TCGA-DZ-6131-11 0 2429 0 2429 NA NA 0 2429 #> 4245 TCGA-DZ-6132-01 0 2460 0 2460 NA NA 0 2460 #> 4246 TCGA-DZ-6132-11 0 2460 0 2460 NA NA 0 2460 #> 4247 TCGA-DZ-6133-01 1 1557 0 1557 NA NA 0 1557 #> 4248 TCGA-DZ-6133-11 1 1557 0 1557 NA NA 0 1557 #> 4249 TCGA-DZ-6134-01 0 1856 0 1856 NA NA 0 1856 #> 4250 TCGA-DZ-6134-11 0 1856 0 1856 NA NA 0 1856 #> 4251 TCGA-DZ-6135-01 0 2269 0 2269 NA NA 0 2269 #> 4252 TCGA-EV-5901-01 0 1040 0 1040 NA NA 0 1040 #> 4253 TCGA-EV-5902-01 0 578 0 578 NA NA 0 578 #> 4254 TCGA-EV-5903-01 0 757 0 757 NA NA 0 757 #> 4255 TCGA-F9-A4JJ-01 1 325 1 325 NA NA 1 109 #> 4256 TCGA-F9-A7Q0-01 0 398 0 398 0 398 0 398 #> 4257 TCGA-F9-A7VF-01 0 73 0 73 0 73 0 73 #> 4258 TCGA-F9-A8NY-01 0 36 0 36 NA NA 0 36 #> 4259 TCGA-F9-A97G-01 0 13 0 13 0 13 0 13 #> 4260 TCGA-G7-6789-01 1 122 1 122 NA NA 1 122 #> 4261 TCGA-G7-6790-01 0 1575 0 1575 NA NA 1 1558 #> 4262 TCGA-G7-6792-01 0 2765 0 2765 0 2765 0 2765 #> 4263 TCGA-G7-6793-01 1 336 1 336 NA NA 1 336 #> 4264 TCGA-G7-6795-01 0 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TCGA-IZ-8196-01 0 649 0 649 0 649 0 649 #> 4306 TCGA-IZ-A6M8-01 0 497 0 497 0 497 0 497 #> 4307 TCGA-IZ-A6M9-01 0 376 0 376 0 376 0 376 #> 4308 TCGA-J7-6720-01 0 388 0 388 0 388 0 388 #> 4309 TCGA-J7-8537-01 1 321 1 321 1 220 1 220 #> 4310 TCGA-J7-A8I2-01 0 307 0 307 1 268 1 268 #> 4311 TCGA-KV-A6GD-01 0 560 0 560 0 560 0 560 #> 4312 TCGA-KV-A6GE-01 0 885 0 885 0 885 0 885 #> 4313 TCGA-KV-A74V-01 0 347 0 347 0 347 0 347 #> 4314 TCGA-MH-A55W-01 0 1043 0 1043 0 1043 0 1043 #> 4315 TCGA-MH-A55Z-01 0 845 0 845 0 845 0 845 #> 4316 TCGA-MH-A560-01 0 924 0 924 0 924 0 924 #> 4317 TCGA-MH-A561-01 0 841 0 841 0 841 0 841 #> 4318 TCGA-MH-A562-01 0 616 0 616 0 616 0 616 #> 4319 TCGA-MH-A854-01 0 536 0 536 0 536 0 536 #> 4320 TCGA-MH-A855-01 0 369 0 369 1 0 1 0 #> 4321 TCGA-MH-A856-01 0 947 0 947 0 947 0 947 #> 4322 TCGA-MH-A857-01 0 890 0 890 NA NA 0 890 #> 4323 TCGA-O9-A75Z-01 0 471 0 471 NA NA 0 471 #> 4324 TCGA-P4-A5E6-01 0 3035 0 3035 0 3035 0 3035 #> 4325 TCGA-P4-A5E7-01 0 2649 0 2649 0 2649 0 2649 #> 4326 TCGA-P4-A5E8-01 1 1306 1 1306 NA NA 1 42 #> 4327 TCGA-P4-A5E8-11 1 1306 1 1306 NA NA 1 42 #> 4328 TCGA-P4-A5EA-01 1 201 1 201 1 44 1 44 #> 4329 TCGA-P4-A5EB-01 0 3015 0 3015 0 3015 0 3015 #> 4330 TCGA-P4-A5ED-01 0 2816 0 2816 0 2816 0 2816 #> 4331 TCGA-P4-A5ED-11 0 2816 0 2816 0 2816 0 2816 #> 4332 TCGA-P4-AAVK-01 0 1590 0 1590 1 232 1 232 #> 4333 TCGA-P4-AAVL-01 1 487 1 487 1 41 1 41 #> 4334 TCGA-P4-AAVM-01 0 1539 0 1539 0 1539 0 1539 #> 4335 TCGA-P4-AAVO-01 0 2400 0 2400 0 2400 0 2400 #> 4336 TCGA-PJ-A5Z8-01 0 600 0 600 0 600 0 600 #> 4337 TCGA-PJ-A5Z9-01 0 540 0 540 0 540 0 540 #> 4338 TCGA-Q2-A5QZ-01 0 428 0 428 1 412 1 412 #> 4339 TCGA-SX-A71R-01 0 1457 0 1457 0 1457 0 1457 #> 4340 TCGA-SX-A71S-01 0 1504 0 1504 0 1504 0 1504 #> 4341 TCGA-SX-A71U-01 0 1357 0 1357 0 1357 0 1357 #> 4342 TCGA-SX-A71V-01 0 876 0 876 0 876 0 876 #> 4343 TCGA-SX-A71W-01 0 1076 0 1076 0 1076 0 1076 #> 4344 TCGA-SX-A7SL-01 0 823 0 823 0 823 0 823 #> 4345 TCGA-SX-A7SM-01 1 363 1 363 NA NA 1 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4554 TCGA-AB-3009-03 1 577 NA NA NA NA NA NA #> 4555 TCGA-AB-3011-03 0 1885 0 NA NA NA NA NA #> 4556 TCGA-AB-3012-03 0 1887 0 NA NA NA NA NA #> 4557 TCGA-CS-4938-01 0 3574 0 3574 NA NA 0 3574 #> 4558 TCGA-CS-4941-01 1 234 1 234 NA NA 1 9 #> 4559 TCGA-CS-4942-01 1 1335 1 1335 NA NA 1 1184 #> 4560 TCGA-CS-4943-01 1 1106 1 1106 NA NA 1 1106 #> 4561 TCGA-CS-4944-01 0 1828 0 1828 NA NA 0 1828 #> 4562 TCGA-CS-5390-01 0 NA 0 NA 0 NA 0 NA #> 4563 TCGA-CS-5393-01 0 1222 0 1222 0 1222 0 1222 #> 4564 TCGA-CS-5394-01 0 8 0 8 NA NA 0 8 #> 4565 TCGA-CS-5395-01 1 639 1 639 NA NA 1 287 #> 4566 TCGA-CS-5396-01 0 1631 0 1631 NA NA 0 1631 #> 4567 TCGA-CS-5397-01 1 194 1 194 NA NA 1 194 #> 4568 TCGA-CS-6186-01 1 538 1 538 NA NA 1 188 #> 4569 TCGA-CS-6188-01 1 814 1 814 NA NA 1 647 #> 4570 TCGA-CS-6290-01 1 1137 NA 1137 NA NA 0 1137 #> 4571 TCGA-CS-6666-01 0 1428 0 1428 NA NA 0 1428 #> 4572 TCGA-CS-6667-01 0 1469 0 1469 NA NA 0 1469 #> 4573 TCGA-CS-6668-01 0 1519 0 1519 NA NA 0 1519 #> 4574 TCGA-CS-6669-01 0 1494 0 1494 NA NA 0 1494 #> 4575 TCGA-CS-6670-01 0 1426 0 1426 NA NA 0 1426 #> 4576 TCGA-DB-5270-01 0 3733 0 3733 0 3733 0 3733 #> 4577 TCGA-DB-5273-01 0 2493 0 2493 0 2493 0 2493 #> 4578 TCGA-DB-5274-01 0 2289 0 2289 0 2289 0 2289 #> 4579 TCGA-DB-5275-01 0 1458 0 1458 0 1458 0 1458 #> 4580 TCGA-DB-5276-01 0 2218 0 2218 0 2218 0 2218 #> 4581 TCGA-DB-5277-01 1 1547 1 1547 1 1156 1 1156 #> 4582 TCGA-DB-5278-01 0 2772 0 2772 NA NA 1 507 #> 4583 TCGA-DB-5279-01 0 1354 0 1354 1 695 1 695 #> 4584 TCGA-DB-5280-01 0 1112 0 1112 0 1112 0 1112 #> 4585 TCGA-DB-5281-01 0 2381 0 2381 NA NA 0 2381 #> 4586 TCGA-DB-A4X9-01 0 1412 0 1412 1 501 1 501 #> 4587 TCGA-DB-A4XA-01 0 573 0 573 NA NA 0 573 #> 4588 TCGA-DB-A4XB-01 0 919 0 919 NA NA 0 919 #> 4589 TCGA-DB-A4XC-01 0 1421 0 1421 NA NA 0 1421 #> 4590 TCGA-DB-A4XD-01 0 1210 0 1210 0 1210 0 1210 #> 4591 TCGA-DB-A4XE-01 0 1139 0 1139 0 1139 0 1139 #> 4592 TCGA-DB-A4XF-01 0 1021 0 1021 NA NA 1 468 #> 4593 TCGA-DB-A4XG-01 0 2219 0 2219 NA NA 0 2219 #> 4594 TCGA-DB-A4XH-01 0 962 0 962 NA NA 0 962 #> 4595 TCGA-DB-A64L-01 0 736 0 736 1 724 1 724 #> 4596 TCGA-DB-A64O-01 1 775 1 775 NA NA 1 430 #> 4597 TCGA-DB-A64P-01 0 916 0 916 0 916 0 916 #> 4598 TCGA-DB-A64Q-01 0 182 0 182 NA NA 0 182 #> 4599 TCGA-DB-A64R-01 0 955 0 955 0 955 0 955 #> 4600 TCGA-DB-A64S-01 0 835 0 835 0 835 0 835 #> 4601 TCGA-DB-A64U-01 0 846 0 846 0 846 0 846 #> 4602 TCGA-DB-A64V-01 0 889 0 889 NA NA 0 889 #> 4603 TCGA-DB-A64W-01 1 438 0 438 NA NA 0 438 #> 4604 TCGA-DB-A64X-01 0 563 0 563 NA NA 0 563 #> 4605 TCGA-DB-A75K-01 0 368 0 368 0 368 0 368 #> 4606 TCGA-DB-A75L-01 0 342 0 342 0 342 0 342 #> 4607 TCGA-DB-A75M-01 0 544 0 544 0 544 0 544 #> 4608 TCGA-DB-A75O-01 0 935 0 935 NA NA 0 935 #> 4609 TCGA-DB-A75P-01 0 492 0 492 0 492 0 492 #> 4610 TCGA-DH-5140-01 1 607 1 607 NA NA 1 607 #> 4611 TCGA-DH-5141-01 0 968 0 968 NA NA 0 968 #> 4612 TCGA-DH-5142-01 0 1943 0 1943 NA NA 1 1627 #> 4613 TCGA-DH-5143-01 0 1401 0 1401 NA NA 0 1401 #> 4614 TCGA-DH-5144-01 0 748 0 748 0 748 0 748 #> 4615 TCGA-DH-A669-02 1 919 0 919 NA NA 1 260 #> 4616 TCGA-DH-A669-01 1 919 0 919 NA NA 1 260 #> 4617 TCGA-DH-A66B-01 0 1279 0 1279 NA NA 0 1279 #> 4618 TCGA-DH-A66D-01 0 846 0 846 NA NA 0 846 #> 4619 TCGA-DH-A66F-01 0 523 0 523 0 523 0 523 #> 4620 TCGA-DH-A7UR-01 0 1650 0 1650 0 1650 0 1650 #> 4621 TCGA-DH-A7US-01 0 706 0 706 NA NA 0 706 #> 4622 TCGA-DH-A7UT-01 1 531 1 531 NA NA 1 404 #> 4623 TCGA-DH-A7UU-01 0 417 0 417 NA NA 0 417 #> 4624 TCGA-DH-A7UV-01 0 566 0 566 NA NA 0 566 #> 4625 TCGA-DU-5847-01 0 548 0 548 NA NA 0 548 #> 4626 TCGA-DU-5849-01 0 443 0 443 NA NA 0 443 #> 4627 TCGA-DU-5852-01 1 205 1 205 NA NA 1 24 #> 4628 TCGA-DU-5853-01 0 407 0 407 NA NA 0 407 #> 4629 TCGA-DU-5854-01 0 257 0 257 NA NA 1 202 #> 4630 TCGA-DU-5855-01 0 207 0 207 NA NA 0 207 #> 4631 TCGA-DU-5870-02 0 5546 0 5546 NA NA 1 4347 #> 4632 TCGA-DU-5870-01 0 5546 0 5546 NA NA 1 4347 #> 4633 TCGA-DU-5871-01 0 576 0 576 NA NA 0 576 #> 4634 TCGA-DU-5872-02 0 532 0 532 NA NA 1 265 #> 4635 TCGA-DU-5872-01 0 532 0 532 NA NA 1 265 #> 4636 TCGA-DU-5874-01 0 461 0 461 NA NA 0 461 #> 4637 TCGA-DU-6392-01 0 6423 0 6423 NA NA 1 950 #> 4638 TCGA-DU-6393-01 1 1585 NA 1585 NA NA 0 1585 #> 4639 TCGA-DU-6394-01 1 682 1 682 NA NA 1 353 #> 4640 TCGA-DU-6395-01 1 1491 1 1491 NA NA 1 1197 #> 4641 TCGA-DU-6396-01 1 2286 1 2286 NA NA 1 106 #> 4642 TCGA-DU-6397-02 1 1401 1 1401 NA NA 1 837 #> 4643 TCGA-DU-6399-01 1 2000 1 2000 NA NA 1 1629 #> 4644 TCGA-DU-6400-01 1 37 1 37 NA NA 1 37 #> 4645 TCGA-DU-6401-01 1 2660 1 2660 NA NA 1 1886 #> 4646 TCGA-DU-6402-01 1 214 1 214 NA NA 1 103 #> 4647 TCGA-DU-6403-01 1 354 1 354 NA NA 1 354 #> 4648 TCGA-DU-6404-02 1 4068 1 4068 NA NA 1 1154 #> 4649 TCGA-DU-6404-01 1 4068 1 4068 NA NA 1 1154 #> 4650 TCGA-DU-6405-01 1 605 1 605 NA NA 1 486 #> 4651 TCGA-DU-6406-01 1 512 NA 512 NA NA 0 512 #> 4652 TCGA-DU-6407-02 1 2875 1 2875 NA NA 1 2397 #> 4653 TCGA-DU-6407-01 1 2875 1 2875 NA NA 1 2397 #> 4654 TCGA-DU-6408-01 1 3470 NA 3470 NA NA 1 2097 #> 4655 TCGA-DU-6410-01 0 242 0 242 NA NA 0 242 #> 4656 TCGA-DU-6542-01 0 73 0 73 NA NA 0 73 #> 4657 TCGA-DU-7006-01 1 349 1 349 NA NA 1 349 #> 4658 TCGA-DU-7007-01 1 1915 NA 1915 NA NA 0 1915 #> 4659 TCGA-DU-7008-01 0 4752 0 4752 NA NA 1 330 #> 4660 TCGA-DU-7009-01 1 4695 1 4695 NA NA 1 2960 #> 4661 TCGA-DU-7010-01 1 456 1 456 NA NA 1 193 #> 4662 TCGA-DU-7011-01 1 3200 1 3200 NA NA 1 3200 #> 4663 TCGA-DU-7012-01 1 199 1 199 NA NA 1 199 #> 4664 TCGA-DU-7013-01 1 269 1 269 NA NA 1 187 #> 4665 TCGA-DU-7014-01 1 3571 1 3571 NA NA 1 3437 #> 4666 TCGA-DU-7015-01 0 2761 0 2761 NA NA 1 591 #> 4667 TCGA-DU-7018-01 1 933 1 933 NA NA 1 338 #> 4668 TCGA-DU-7019-01 0 800 0 800 NA NA 0 800 #> 4669 TCGA-DU-7290-01 1 315 1 315 NA NA 1 315 #> 4670 TCGA-DU-7292-01 1 242 1 242 NA NA 1 91 #> 4671 TCGA-DU-7294-01 0 2869 0 2869 NA NA 0 2869 #> 4672 TCGA-DU-7298-01 1 576 1 576 NA NA 1 200 #> 4673 TCGA-DU-7299-01 1 1339 1 1339 NA NA 1 675 #> 4674 TCGA-DU-7300-01 1 1886 1 1886 NA NA 1 317 #> 4675 TCGA-DU-7301-01 1 788 1 788 NA NA 1 366 #> 4676 TCGA-DU-7302-01 0 1834 0 1834 NA NA 1 1374 #> 4677 TCGA-DU-7304-02 1 709 1 709 NA NA 1 309 #> 4678 TCGA-DU-7306-01 0 1277 0 1277 NA NA 1 1250 #> 4679 TCGA-DU-7309-01 0 84 0 84 NA NA 0 84 #> 4680 TCGA-DU-8158-01 1 155 1 155 NA NA 1 155 #> 4681 TCGA-DU-8161-01 1 722 1 722 NA NA 1 111 #> 4682 TCGA-DU-8162-01 1 444 1 444 NA NA 1 402 #> 4683 TCGA-DU-8163-01 0 629 0 629 NA NA 1 509 #> 4684 TCGA-DU-8164-01 0 651 0 651 NA NA 0 651 #> 4685 TCGA-DU-8165-01 0 582 0 582 NA NA 0 582 #> 4686 TCGA-DU-8166-01 0 516 0 516 NA NA 1 193 #> 4687 TCGA-DU-8167-01 0 471 0 471 NA NA 0 471 #> 4688 TCGA-DU-8168-01 0 431 0 431 NA NA 0 431 #> 4689 TCGA-DU-A5TP-01 0 1012 0 1012 NA NA 1 203 #> 4690 TCGA-DU-A5TR-01 0 908 0 908 NA NA 1 848 #> 4691 TCGA-DU-A5TS-01 0 964 0 964 NA NA 1 551 #> 4692 TCGA-DU-A5TT-01 0 743 0 743 NA NA 1 584 #> 4693 TCGA-DU-A5TU-01 0 796 0 796 NA NA 1 186 #> 4694 TCGA-DU-A5TW-01 0 760 0 760 NA NA 0 760 #> 4695 TCGA-DU-A5TY-01 1 1033 1 1033 NA NA 1 526 #> 4696 TCGA-DU-A6S2-01 0 777 0 777 NA NA 0 777 #> 4697 TCGA-DU-A6S3-01 0 656 0 656 NA NA 0 656 #> 4698 TCGA-DU-A6S6-01 0 2893 0 2893 NA NA 1 2267 #> 4699 TCGA-DU-A6S7-01 0 638 0 638 NA NA 0 638 #> 4700 TCGA-DU-A6S8-01 0 678 0 678 NA NA 1 641 #> 4701 TCGA-DU-A76K-01 1 347 1 347 NA NA 1 203 #> 4702 TCGA-DU-A76L-01 1 814 1 814 NA NA 1 410 #> 4703 TCGA-DU-A76O-01 0 522 0 522 NA NA 0 522 #> 4704 TCGA-DU-A76R-01 1 648 1 648 NA NA 1 338 #> 4705 TCGA-DU-A7T6-01 1 547 1 547 NA NA 1 547 #> 4706 TCGA-DU-A7T8-01 1 4229 1 4229 NA NA 1 3009 #> 4707 TCGA-DU-A7TA-01 0 2565 0 2565 NA NA 0 2565 #> 4708 TCGA-DU-A7TB-01 0 1567 0 1567 NA NA 1 74 #> 4709 TCGA-DU-A7TC-01 0 1137 0 1137 NA NA 1 1114 #> 4710 TCGA-DU-A7TD-01 1 228 1 228 NA NA 1 188 #> 4711 TCGA-DU-A7TG-01 1 1351 NA 1351 NA NA 0 1351 #> 4712 TCGA-DU-A7TI-01 1 1183 1 1183 NA NA 1 822 #> 4713 TCGA-DU-A7TJ-01 0 17 0 17 NA NA 0 17 #> 4714 TCGA-E1-5302-01 1 1525 1 1525 NA NA 1 1242 #> 4715 TCGA-E1-5303-01 1 2052 1 2052 NA NA 1 156 #> 4716 TCGA-E1-5304-01 1 1251 1 1251 NA NA 1 903 #> 4717 TCGA-E1-5305-01 1 2433 1 2433 NA NA 1 1604 #> 4718 TCGA-E1-5307-01 1 1762 1 1762 NA NA 1 1452 #> 4719 TCGA-E1-5311-01 1 4084 1 4084 NA NA 1 2602 #> 4720 TCGA-E1-5318-01 1 2379 1 2379 NA NA 1 362 #> 4721 TCGA-E1-5319-01 1 2907 1 2907 NA NA 1 923 #> 4722 TCGA-E1-5322-01 1 3978 NA 3978 NA NA 1 1085 #> 4723 TCGA-E1-A7YD-01 1 435 1 435 NA NA 1 284 #> 4724 TCGA-E1-A7YE-01 1 886 1 886 NA NA 1 188 #> 4725 TCGA-E1-A7YH-01 1 2835 1 2835 NA NA 1 689 #> 4726 TCGA-E1-A7YI-01 1 111 1 111 NA NA 1 56 #> 4727 TCGA-E1-A7YJ-01 1 592 1 592 NA NA 1 516 #> 4728 TCGA-E1-A7YK-01 1 378 NA 378 NA NA 0 378 #> 4729 TCGA-E1-A7YL-01 1 492 1 492 NA NA 1 91 #> 4730 TCGA-E1-A7YM-01 1 648 1 648 NA NA 1 88 #> 4731 TCGA-E1-A7YN-01 1 727 1 727 NA NA 1 420 #> 4732 TCGA-E1-A7YO-01 1 2282 1 2282 NA NA 1 1977 #> 4733 TCGA-E1-A7YQ-01 1 1578 1 1578 NA NA 1 580 #> 4734 TCGA-E1-A7YS-01 1 466 1 466 NA NA 1 466 #> 4735 TCGA-E1-A7YU-01 1 23 1 23 NA NA 1 23 #> 4736 TCGA-E1-A7YV-01 1 987 1 987 NA NA 1 97 #> 4737 TCGA-E1-A7YW-01 1 1120 1 1120 NA NA 1 409 #> 4738 TCGA-E1-A7YY-01 1 4445 1 4445 NA NA 1 958 #> 4739 TCGA-E1-A7Z2-01 1 398 1 398 NA NA 1 213 #> 4740 TCGA-E1-A7Z3-01 1 2235 1 2235 NA NA 1 1569 #> 4741 TCGA-E1-A7Z4-01 1 4412 1 4412 NA NA 1 846 #> 4742 TCGA-E1-A7Z6-01 1 984 1 984 NA NA 1 294 #> 4743 TCGA-EZ-7264-01 0 1201 0 1201 NA NA 0 1201 #> 4744 TCGA-F6-A8O3-01 0 7 0 7 0 7 0 7 #> 4745 TCGA-F6-A8O4-01 0 6 0 6 0 6 0 6 #> 4746 TCGA-FG-5962-01 0 1453 0 1453 NA NA 0 1453 #> 4747 TCGA-FG-5963-02 1 775 1 775 NA NA 1 395 #> 4748 TCGA-FG-5963-01 1 775 1 775 NA NA 1 395 #> 4749 TCGA-FG-5964-01 0 1588 0 1588 NA NA 0 1588 #> 4750 TCGA-FG-5965-02 1 1120 1 1120 NA NA 1 715 #> 4751 TCGA-FG-5965-01 1 1120 1 1120 NA NA 1 715 #> 4752 TCGA-FG-6688-01 0 571 0 571 NA NA 1 405 #> 4753 TCGA-FG-6689-01 0 454 0 454 NA NA 1 119 #> 4754 TCGA-FG-6690-01 0 1294 0 1294 NA NA 0 1294 #> 4755 TCGA-FG-6691-01 0 1257 0 1257 1 913 1 913 #> 4756 TCGA-FG-6692-01 1 561 1 561 NA NA 1 561 #> 4757 TCGA-FG-7634-01 0 467 0 467 NA NA 0 467 #> 4758 TCGA-FG-7636-01 0 544 0 544 0 544 0 544 #> 4759 TCGA-FG-7637-01 0 1219 0 1219 NA NA 0 1219 #> 4760 TCGA-FG-7638-01 0 686 0 686 NA NA 1 407 #> 4761 TCGA-FG-7641-01 0 627 0 627 0 627 0 627 #> 4762 TCGA-FG-7643-01 0 611 0 611 NA NA 1 254 #> 4763 TCGA-FG-8181-01 0 862 0 862 NA NA 0 862 #> 4764 TCGA-FG-8182-01 0 416 0 416 NA NA 0 416 #> 4765 TCGA-FG-8185-01 0 433 0 433 0 433 0 433 #> 4766 TCGA-FG-8186-01 0 487 0 487 NA NA 0 487 #> 4767 TCGA-FG-8187-01 0 611 0 611 0 611 0 611 #> 4768 TCGA-FG-8188-01 0 455 0 455 NA NA 1 384 #> 4769 TCGA-FG-8189-01 0 685 0 685 NA NA 0 685 #> 4770 TCGA-FG-8191-01 0 992 0 992 NA NA 0 992 #> 4771 TCGA-FG-A4MT-02 0 1164 0 1164 1 499 1 499 #> 4772 TCGA-FG-A4MT-01 0 1164 0 1164 1 499 1 499 #> 4773 TCGA-FG-A4MU-01 0 326 0 326 NA NA 0 326 #> 4774 TCGA-FG-A4MW-01 1 559 1 559 NA NA 1 226 #> 4775 TCGA-FG-A4MX-01 0 569 0 569 0 569 0 569 #> 4776 TCGA-FG-A4MY-01 0 721 0 721 NA NA 0 721 #> 4777 TCGA-FG-A60J-01 0 449 0 449 0 449 0 449 #> 4778 TCGA-FG-A60K-01 0 542 0 542 NA NA 0 542 #> 4779 TCGA-FG-A60L-01 0 655 0 655 0 655 0 655 #> 4780 TCGA-FG-A6IZ-01 0 457 0 457 0 457 0 457 #> 4781 TCGA-FG-A6J1-01 0 500 0 500 NA NA 0 500 #> 4782 TCGA-FG-A6J3-01 0 677 0 677 NA NA 1 285 #> 4783 TCGA-FG-A70Y-01 0 868 0 868 1 490 1 490 #> 4784 TCGA-FG-A70Z-01 0 328 0 328 NA NA 0 328 #> 4785 TCGA-FG-A710-01 0 1115 0 1115 NA NA 0 1115 #> 4786 TCGA-FG-A711-01 1 1481 1 1481 NA NA 1 347 #> 4787 TCGA-FG-A713-01 0 622 0 622 0 622 0 622 #> 4788 TCGA-FG-A87N-01 0 567 0 567 NA NA 0 567 #> 4789 TCGA-FG-A87Q-01 0 174 0 174 0 174 0 174 #> 4790 TCGA-FN-7833-01 0 837 0 837 0 837 0 837 #> 4791 TCGA-HT-7467-01 0 3 0 3 0 3 0 3 #> 4792 TCGA-HT-7468-01 0 203 0 203 NA NA 0 203 #> 4793 TCGA-HT-7469-01 1 351 1 351 NA NA 1 92 #> 4794 TCGA-HT-7470-01 1 1220 0 1220 0 1220 0 1220 #> 4795 TCGA-HT-7471-01 0 4 0 4 NA NA 0 4 #> 4796 TCGA-HT-7472-01 0 1 0 1 NA NA 0 1 #> 4797 TCGA-HT-7473-01 0 503 0 503 0 503 0 503 #> 4798 TCGA-HT-7474-01 0 114 0 114 NA NA 0 114 #> 4799 TCGA-HT-7475-01 0 530 0 530 0 530 0 530 #> 4800 TCGA-HT-7476-01 0 199 0 199 NA NA 0 199 #> 4801 TCGA-HT-7477-01 0 738 0 738 0 738 0 738 #> 4802 TCGA-HT-7478-01 0 194 0 194 0 194 0 194 #> 4803 TCGA-HT-7479-01 0 1227 0 1227 1 705 1 705 #> 4804 TCGA-HT-7480-01 0 2287 0 2287 NA NA 1 1943 #> 4805 TCGA-HT-7481-01 0 2918 0 2918 NA NA 1 880 #> 4806 TCGA-HT-7482-01 0 3253 0 3253 NA NA 1 374 #> 4807 TCGA-HT-7483-01 0 5255 0 5255 0 5255 0 5255 #> 4808 TCGA-HT-7485-01 0 122 0 122 0 122 0 122 #> 4809 TCGA-HT-7601-01 0 153 0 153 NA NA 0 153 #> 4810 TCGA-HT-7602-01 0 908 0 908 NA NA 0 908 #> 4811 TCGA-HT-7603-01 0 705 0 705 0 705 0 705 #> 4812 TCGA-HT-7604-01 0 3725 0 3725 NA NA 0 3725 #> 4813 TCGA-HT-7605-01 0 139 0 139 NA NA 0 139 #> 4814 TCGA-HT-7606-01 0 526 0 526 0 526 0 526 #> 4815 TCGA-HT-7607-01 1 96 1 96 NA NA 1 96 #> 4816 TCGA-HT-7608-01 0 671 0 671 NA NA 0 671 #> 4817 TCGA-HT-7609-01 0 1399 0 1399 NA NA 0 1399 #> 4818 TCGA-HT-7610-01 0 1706 0 1706 NA NA 1 1205 #> 4819 TCGA-HT-7611-01 0 1752 0 1752 0 1752 0 1752 #> 4820 TCGA-HT-7616-01 1 7 1 7 NA NA 1 7 #> 4821 TCGA-HT-7620-01 0 434 0 434 1 280 1 280 #> 4822 TCGA-HT-7676-01 0 5 0 5 NA NA 0 5 #> 4823 TCGA-HT-7677-01 0 494 0 494 NA NA 0 494 #> 4824 TCGA-HT-7680-01 0 23 0 23 NA NA 0 23 #> 4825 TCGA-HT-7681-01 0 1359 0 1359 0 1359 0 1359 #> 4826 TCGA-HT-7684-01 0 184 0 184 0 184 0 184 #> 4827 TCGA-HT-7686-01 0 1300 0 1300 0 1300 0 1300 #> 4828 TCGA-HT-7687-01 0 3 0 3 NA NA 0 3 #> 4829 TCGA-HT-7688-01 0 964 0 964 0 964 0 964 #> 4830 TCGA-HT-7689-01 0 455 0 455 0 455 0 455 #> 4831 TCGA-HT-7690-01 0 3 0 3 NA NA 0 3 #> 4832 TCGA-HT-7691-01 0 3 0 3 NA NA 0 3 #> 4833 TCGA-HT-7692-01 0 90 0 90 0 90 0 90 #> 4834 TCGA-HT-7693-01 0 533 0 533 NA NA 0 533 #> 4835 TCGA-HT-7694-01 0 210 0 210 0 210 0 210 #> 4836 TCGA-HT-7695-01 0 442 0 442 0 442 0 442 #> 4837 TCGA-HT-7854-01 0 1201 0 1201 NA NA 1 1147 #> 4838 TCGA-HT-7855-01 0 585 0 585 0 585 0 585 #> 4839 TCGA-HT-7856-01 0 1189 0 1189 0 1189 0 1189 #> 4840 TCGA-HT-7857-01 0 7 0 7 NA NA 0 7 #> 4841 TCGA-HT-7858-01 0 1540 0 1540 0 1540 0 1540 #> 4842 TCGA-HT-7860-01 0 15 0 15 NA NA 0 15 #> 4843 TCGA-HT-7873-01 0 718 0 718 NA NA 0 718 #> 4844 TCGA-HT-7874-01 0 1130 0 1130 0 1130 0 1130 #> 4845 TCGA-HT-7875-01 0 10 0 10 NA NA 0 10 #> 4846 TCGA-HT-7877-01 0 4 0 4 NA NA 0 4 #> 4847 TCGA-HT-7879-01 0 112 0 112 0 112 0 112 #> 4848 TCGA-HT-7880-01 0 162 0 162 NA NA 0 162 #> 4849 TCGA-HT-7881-01 0 1079 0 1079 0 1079 0 1079 #> 4850 TCGA-HT-7882-01 1 113 1 113 NA NA 1 113 #> 4851 TCGA-HT-7884-01 0 343 0 343 NA NA 0 343 #> 4852 TCGA-HT-7902-01 0 956 0 956 NA NA 0 956 #> 4853 TCGA-HT-8010-01 0 50 0 50 NA NA 0 50 #> 4854 TCGA-HT-8011-01 0 494 0 494 NA NA 1 278 #> 4855 TCGA-HT-8012-01 0 286 0 286 NA NA 1 133 #> 4856 TCGA-HT-8015-01 0 3 0 3 0 3 0 3 #> 4857 TCGA-HT-8018-01 1 1152 0 1152 NA NA 0 1152 #> 4858 TCGA-HT-8019-01 0 1004 0 1004 0 1004 0 1004 #> 4859 TCGA-HT-8104-01 0 372 0 372 NA NA 0 372 #> 4860 TCGA-HT-8105-01 0 190 0 190 NA NA 0 190 #> 4861 TCGA-HT-8106-01 0 3 0 3 NA NA 0 3 #> 4862 TCGA-HT-8107-01 0 14 0 14 NA NA 0 14 #> 4863 TCGA-HT-8108-01 0 76 0 76 NA NA 0 76 #> 4864 TCGA-HT-8109-01 0 169 0 169 NA NA 0 169 #> 4865 TCGA-HT-8110-01 0 419 0 419 0 419 0 419 #> 4866 TCGA-HT-8111-01 0 7 0 7 NA NA 0 7 #> 4867 TCGA-HT-8113-01 0 900 0 900 0 900 0 900 #> 4868 TCGA-HT-8114-01 0 1040 0 1040 0 1040 0 1040 #> 4869 TCGA-HT-8558-01 0 418 0 418 0 418 0 418 #> 4870 TCGA-HT-8563-01 0 860 0 860 0 860 0 860 #> 4871 TCGA-HT-8564-01 0 478 0 478 NA NA 1 120 #> 4872 TCGA-HT-A4DS-01 0 7 0 7 NA NA 0 7 #> 4873 TCGA-HT-A4DV-01 0 792 0 792 0 792 0 792 #> 4874 TCGA-HT-A5R5-01 0 4 0 4 0 4 0 4 #> 4875 TCGA-HT-A5R7-01 0 615 0 615 0 615 0 615 #> 4876 TCGA-HT-A5R9-01 0 2 0 2 NA NA 0 2 #> 4877 TCGA-HT-A5RA-01 0 832 0 832 NA NA 0 832 #> 4878 TCGA-HT-A5RB-01 0 3 0 3 NA NA 0 3 #> 4879 TCGA-HT-A5RC-01 1 162 1 162 NA NA 1 162 #> 4880 TCGA-HT-A614-01 0 82 0 82 NA NA 0 82 #> 4881 TCGA-HT-A615-01 0 515 0 515 0 515 0 515 #> 4882 TCGA-HT-A616-01 0 55 0 55 NA NA 0 55 #> 4883 TCGA-HT-A617-01 0 491 0 491 NA NA 1 395 #> 4884 TCGA-HT-A618-01 0 512 0 512 0 512 0 512 #> 4885 TCGA-HT-A619-01 0 651 0 651 0 651 0 651 #> 4886 TCGA-HT-A61A-01 0 194 0 194 0 194 0 194 #> 4887 TCGA-HT-A61B-01 0 533 0 533 0 533 0 533 #> 4888 TCGA-HT-A61C-01 1 537 1 537 1 476 1 476 #> 4889 TCGA-HT-A74H-01 0 74 0 74 NA NA 0 74 #> 4890 TCGA-HT-A74J-01 0 320 0 320 NA NA 0 320 #> 4891 TCGA-HT-A74K-01 0 467 0 467 0 467 0 467 #> 4892 TCGA-HT-A74L-01 0 336 0 336 NA NA 0 336 #> 4893 TCGA-HT-A74O-01 0 3 0 3 NA NA 0 3 #> 4894 TCGA-HW-7486-01 0 1721 0 1721 NA NA 0 1721 #> 4895 TCGA-HW-7487-01 0 1382 0 1382 NA NA 1 840 #> 4896 TCGA-HW-7489-01 1 1262 1 1262 NA NA 1 1262 #> 4897 TCGA-HW-7490-01 0 1387 0 1387 NA NA 0 1387 #> 4898 TCGA-HW-7491-01 0 2078 0 2078 NA NA 1 2197 #> 4899 TCGA-HW-7493-01 0 2107 0 2107 NA NA 0 2107 #> 4900 TCGA-HW-7495-01 0 1078 0 1078 NA NA 0 1078 #> 4901 TCGA-HW-8319-01 1 1209 1 1209 NA NA 1 997 #> 4902 TCGA-HW-8320-01 0 1217 0 1217 NA NA 0 1217 #> 4903 TCGA-HW-8321-01 0 1294 0 1294 NA NA 0 1294 #> 4904 TCGA-HW-8322-01 0 758 0 758 NA NA 0 758 #> 4905 TCGA-HW-A5KJ-01 1 962 1 962 NA NA 1 615 #> 4906 TCGA-HW-A5KK-01 1 388 1 388 NA NA 1 388 #> 4907 TCGA-HW-A5KL-01 0 878 0 878 NA NA 0 878 #> 4908 TCGA-HW-A5KM-01 0 630 0 630 NA NA 0 630 #> 4909 TCGA-IK-7675-01 1 578 1 578 NA NA 1 123 #> 4910 TCGA-IK-8125-01 0 1301 0 1301 0 1301 0 1301 #> 4911 TCGA-KT-A74X-01 0 438 0 438 NA NA 0 438 #> 4912 TCGA-KT-A7W1-01 0 438 0 438 NA NA 1 84 #> 4913 TCGA-P5-A5ET-01 0 0 0 0 NA NA 0 0 #> 4914 TCGA-P5-A5EU-01 0 0 0 0 NA NA 0 0 #> 4915 TCGA-P5-A5EV-01 0 7 0 7 NA NA 0 7 #> 4916 TCGA-P5-A5EW-01 0 204 0 204 NA NA 0 204 #> 4917 TCGA-P5-A5EX-01 0 243 0 243 NA NA 0 243 #> 4918 TCGA-P5-A5EY-01 0 72 0 72 NA NA 0 72 #> 4919 TCGA-P5-A5EZ-01 0 70 0 70 NA NA 0 70 #> 4920 TCGA-P5-A5F0-01 0 287 0 287 NA NA 0 287 #> 4921 TCGA-P5-A5F1-01 0 179 0 179 NA NA 0 179 #> 4922 TCGA-P5-A5F2-01 0 242 0 242 NA NA 0 242 #> 4923 TCGA-P5-A5F4-01 0 231 0 231 NA NA 0 231 #> 4924 TCGA-P5-A5F6-01 0 39 0 39 NA NA 0 39 #> 4925 TCGA-P5-A72U-01 0 7 0 7 0 7 0 7 #> 4926 TCGA-P5-A72W-01 0 317 0 317 0 317 0 317 #> 4927 TCGA-P5-A72X-01 0 403 0 403 0 403 0 403 #> 4928 TCGA-P5-A72Z-01 0 354 0 354 0 354 0 354 #> 4929 TCGA-P5-A730-01 0 333 0 333 0 333 0 333 #> 4930 TCGA-P5-A731-01 0 274 0 274 NA NA 0 274 #> 4931 TCGA-P5-A733-01 0 414 0 414 0 414 0 414 #> 4932 TCGA-P5-A735-01 0 292 0 292 0 292 0 292 #> 4933 TCGA-P5-A736-01 0 230 0 230 0 230 0 230 #> 4934 TCGA-P5-A737-01 0 372 0 372 0 372 0 372 #> 4935 TCGA-P5-A77W-01 0 584 0 584 0 584 0 584 #> 4936 TCGA-P5-A77X-01 0 105 0 105 0 105 0 105 #> 4937 TCGA-P5-A780-01 0 72 0 72 0 72 0 72 #> 4938 TCGA-P5-A781-01 0 134 0 134 0 134 0 134 #> 4939 TCGA-QH-A65R-01 0 461 0 461 NA NA 0 461 #> 4940 TCGA-QH-A65S-01 0 77 0 77 NA NA 0 77 #> 4941 TCGA-QH-A65V-01 0 384 0 384 NA NA 0 384 #> 4942 TCGA-QH-A65X-01 0 482 0 482 NA NA 0 482 #> 4943 TCGA-QH-A65Z-01 0 427 0 427 NA NA 0 427 #> 4944 TCGA-QH-A6CS-01 0 588 0 588 NA NA 1 498 #> 4945 TCGA-QH-A6CU-01 0 451 0 451 NA NA 0 451 #> 4946 TCGA-QH-A6CV-01 0 442 0 442 NA NA 0 442 #> 4947 TCGA-QH-A6CW-01 0 414 0 414 NA NA 0 414 #> 4948 TCGA-QH-A6CX-01 1 372 1 372 1 273 1 273 #> 4949 TCGA-QH-A6CY-01 0 408 0 408 NA NA 0 408 #> 4950 TCGA-QH-A6CZ-01 0 279 0 279 NA NA 0 279 #> 4951 TCGA-QH-A6X3-01 0 313 0 313 0 313 0 313 #> 4952 TCGA-QH-A6X4-01 0 442 0 442 0 442 0 442 #> 4953 TCGA-QH-A6X5-01 0 497 0 497 NA NA 0 497 #> 4954 TCGA-QH-A6X8-01 0 509 0 509 NA NA 0 509 #> 4955 TCGA-QH-A6X9-01 0 58 0 58 NA NA 0 58 #> 4956 TCGA-QH-A6XA-01 0 502 0 502 0 502 0 502 #> 4957 TCGA-QH-A6XC-01 0 508 0 508 1 438 1 438 #> 4958 TCGA-QH-A86X-01 0 337 0 337 0 337 0 337 #> 4959 TCGA-QH-A870-01 0 395 0 395 1 335 1 335 #> 4960 TCGA-R8-A6MK-01 0 2702 0 2702 NA NA 0 2702 #> 4961 TCGA-R8-A6ML-01 0 2860 0 2860 NA NA 0 2860 #> 4962 TCGA-R8-A6MO-01 0 993 0 993 NA NA 0 993 #> 4963 TCGA-R8-A73M-01 0 1806 0 1806 NA NA 0 1806 #> 4964 TCGA-RY-A83X-01 0 939 0 939 NA NA 0 939 #> 4965 TCGA-RY-A83Y-01 0 166 0 166 NA NA 0 166 #> 4966 TCGA-RY-A83Z-01 0 301 0 301 NA NA 0 301 #> 4967 TCGA-RY-A840-01 0 854 0 854 NA NA 0 854 #> 4968 TCGA-RY-A843-01 0 63 0 63 NA NA 0 63 #> 4969 TCGA-RY-A845-01 0 596 0 596 NA NA 0 596 #> 4970 TCGA-RY-A847-01 0 933 0 933 NA NA 0 933 #> 4971 TCGA-S9-A6TS-01 1 1891 1 1891 NA NA 1 1324 #> 4972 TCGA-S9-A6TU-01 0 2650 0 2650 NA NA 1 1475 #> 4973 TCGA-S9-A6TV-01 0 571 0 571 0 571 0 571 #> 4974 TCGA-S9-A6TW-01 0 1250 0 1250 NA NA 1 861 #> 4975 TCGA-S9-A6TX-01 0 1245 0 1245 1 856 1 856 #> 4976 TCGA-S9-A6TY-01 0 1076 0 1076 NA NA 0 1076 #> 4977 TCGA-S9-A6TZ-01 0 1120 0 1120 NA NA 1 552 #> 4978 TCGA-S9-A6U0-01 1 742 1 742 NA NA 1 692 #> 4979 TCGA-S9-A6U1-01 0 785 0 785 0 785 0 785 #> 4980 TCGA-S9-A6U2-01 0 908 0 908 NA NA 0 908 #> 4981 TCGA-S9-A6U5-01 0 992 0 992 0 992 0 992 #> 4982 TCGA-S9-A6U6-01 0 1069 0 1069 0 1069 0 1069 #> 4983 TCGA-S9-A6U8-01 1 2988 1 2988 NA NA 1 367 #> 4984 TCGA-S9-A6U9-01 0 2918 0 2918 NA NA 0 2918 #> 4985 TCGA-S9-A6UA-01 1 178 1 178 NA NA 1 161 #> 4986 TCGA-S9-A6UB-01 0 3761 0 3761 0 3761 0 3761 #> 4987 TCGA-S9-A6WD-01 0 2289 0 2289 NA NA 0 2289 #> 4988 TCGA-S9-A6WE-01 0 4113 0 4113 NA NA 0 4113 #> 4989 TCGA-S9-A6WG-01 0 2602 0 2602 NA NA 0 2602 #> 4990 TCGA-S9-A6WH-01 0 1173 0 1173 NA NA 0 1173 #> 4991 TCGA-S9-A6WI-01 0 2585 0 2585 NA NA 0 2585 #> 4992 TCGA-S9-A6WL-01 0 946 0 946 NA NA 1 240 #> 4993 TCGA-S9-A6WM-01 0 604 0 604 NA NA 1 505 #> 4994 TCGA-S9-A6WN-01 0 805 0 805 NA NA 1 303 #> 4995 TCGA-S9-A6WO-01 0 566 0 566 NA NA 1 187 #> 4996 TCGA-S9-A6WP-01 0 567 0 567 NA NA 0 567 #> 4997 TCGA-S9-A7IQ-01 0 1099 0 1099 NA NA 0 1099 #> 4998 TCGA-S9-A7IS-01 1 241 1 241 NA NA 1 241 #> 4999 TCGA-S9-A7IX-01 1 819 1 819 NA NA 1 350 #> 5000 TCGA-S9-A7IY-01 0 715 0 715 NA NA 0 715 #> 5001 TCGA-S9-A7IZ-01 0 608 0 608 NA NA 1 467 #> 5002 TCGA-S9-A7J0-01 0 609 0 609 NA NA 1 390 #> 5003 TCGA-S9-A7J1-01 0 249 0 249 NA NA 0 249 #> 5004 TCGA-S9-A7J2-01 0 62 0 62 NA NA 0 62 #> 5005 TCGA-S9-A7J3-01 0 629 0 629 NA NA 0 629 #> 5006 TCGA-S9-A7QW-01 0 458 0 458 1 382 1 382 #> 5007 TCGA-S9-A7QX-01 0 564 0 564 NA NA 0 564 #> 5008 TCGA-S9-A7QY-01 0 863 0 863 NA NA 0 863 #> 5009 TCGA-S9-A7QZ-01 0 826 0 826 NA NA 1 774 #> 5010 TCGA-S9-A7R1-01 1 5166 1 5166 NA NA 1 3637 #> 5011 TCGA-S9-A7R2-01 1 316 1 316 NA NA 1 316 #> 5012 TCGA-S9-A7R3-01 0 3013 0 3013 NA NA 1 970 #> 5013 TCGA-S9-A7R4-01 0 914 0 914 NA NA 0 914 #> 5014 TCGA-S9-A7R7-01 0 3000 0 3000 NA NA 1 144 #> 5015 TCGA-S9-A7R8-01 1 961 1 961 NA NA 1 698 #> 5016 TCGA-S9-A89V-01 0 569 0 569 NA NA 1 129 #> 5017 TCGA-S9-A89Z-01 0 623 0 623 NA NA 0 623 #> 5018 TCGA-TM-A7C3-01 1 1666 1 1666 1 713 1 713 #> 5019 TCGA-TM-A7C4-01 0 1470 0 1470 0 1470 0 1470 #> 5020 TCGA-TM-A7C5-01 0 1500 0 1500 0 1500 0 1500 #> 5021 TCGA-TM-A7CA-01 0 1058 0 1058 0 1058 0 1058 #> 5022 TCGA-TM-A7CF-02 0 1989 0 1989 1 924 1 924 #> 5023 TCGA-TM-A7CF-01 0 1989 0 1989 1 924 1 924 #> 5024 TCGA-TM-A84B-01 1 758 1 758 NA NA 1 758 #> 5025 TCGA-TM-A84C-01 1 492 1 492 NA NA 1 492 #> 5026 TCGA-TM-A84F-01 0 1796 0 1796 0 1796 0 1796 #> 5027 TCGA-TM-A84G-01 0 1236 0 1236 0 1236 0 1236 #> 5028 TCGA-TM-A84H-01 0 926 0 926 0 926 0 926 #> 5029 TCGA-TM-A84I-01 0 854 0 854 0 854 0 854 #> 5030 TCGA-TM-A84J-01 0 735 0 735 NA NA 1 454 #> 5031 TCGA-TM-A84L-01 1 1242 1 1242 1 987 1 987 #> 5032 TCGA-TM-A84M-01 0 754 0 754 0 754 0 754 #> 5033 TCGA-TM-A84O-01 1 1011 1 1011 NA NA 1 1011 #> 5034 TCGA-TM-A84Q-01 0 772 0 772 1 455 1 455 #> 5035 TCGA-TM-A84R-01 0 566 0 566 0 566 0 566 #> 5036 TCGA-TM-A84S-01 0 454 0 454 0 454 0 454 #> 5037 TCGA-TM-A84T-01 0 724 0 724 NA NA 0 724 #> 5038 TCGA-TQ-A7RF-01 0 650 0 650 NA NA 0 650 #> 5039 TCGA-TQ-A7RG-01 0 599 0 599 NA NA 0 599 #> 5040 TCGA-TQ-A7RH-01 0 486 0 486 NA NA 0 486 #> 5041 TCGA-TQ-A7RI-01 0 62 0 62 NA NA 0 62 #> 5042 TCGA-TQ-A7RJ-01 0 1229 0 1229 NA NA 0 1229 #> 5043 TCGA-TQ-A7RK-02 0 1341 0 1341 1 858 1 858 #> 5044 TCGA-TQ-A7RK-01 0 1341 0 1341 1 858 1 858 #> 5045 TCGA-TQ-A7RM-01 0 1116 0 1116 NA NA 0 1116 #> 5046 TCGA-TQ-A7RN-01 0 1026 0 1026 NA NA 0 1026 #> 5047 TCGA-TQ-A7RO-01 0 949 0 949 NA NA 0 949 #> 5048 TCGA-TQ-A7RP-01 0 914 0 914 NA NA 0 914 #> 5049 TCGA-TQ-A7RQ-01 0 795 0 795 0 795 0 795 #> 5050 TCGA-TQ-A7RR-01 0 787 0 787 NA NA 0 787 #> 5051 TCGA-TQ-A7RS-01 0 0 0 0 0 0 0 0 #> 5052 TCGA-TQ-A7RU-01 0 1032 0 1032 NA NA 0 1032 #> 5053 TCGA-TQ-A7RV-02 0 1868 0 1868 NA NA 1 530 #> 5054 TCGA-TQ-A7RV-01 0 1868 0 1868 NA NA 1 530 #> 5055 TCGA-TQ-A7RW-01 1 821 1 821 NA NA 1 511 #> 5056 TCGA-TQ-A8XE-02 1 954 1 954 NA NA 1 455 #> 5057 TCGA-TQ-A8XE-01 1 954 1 954 NA NA 1 455 #> 5058 TCGA-VM-A8C8-01 0 1397 0 1397 NA NA 1 456 #> 5059 TCGA-VM-A8C9-01 0 1314 0 1314 0 1314 0 1314 #> 5060 TCGA-VM-A8CA-01 0 411 0 411 NA NA 0 411 #> 5061 TCGA-VM-A8CB-01 0 3 0 3 NA NA 0 3 #> 5062 TCGA-VM-A8CD-01 1 240 1 240 NA NA 1 240 #> 5063 TCGA-VM-A8CE-01 0 1191 0 1191 NA NA 1 815 #> 5064 TCGA-VM-A8CF-01 0 609 0 609 NA NA 0 609 #> 5065 TCGA-VM-A8CH-01 0 714 0 714 0 714 0 714 #> 5066 TCGA-VV-A829-01 0 1127 0 1127 NA NA 0 1127 #> 5067 TCGA-VV-A86M-01 0 487 0 487 NA NA 0 487 #> 5068 TCGA-VW-A7QS-01 0 706 0 706 NA NA 0 706 #> 5069 TCGA-VW-A8FI-01 1 245 1 245 NA NA 1 245 #> 5070 TCGA-W9-A837-01 0 1553 0 1553 NA NA 0 1553 #> 5071 TCGA-WH-A86K-01 0 405 0 405 NA NA 0 405 #> 5072 TCGA-WY-A858-01 0 1337 0 1337 0 1337 0 1337 #> 5073 TCGA-WY-A859-01 0 1213 0 1213 NA NA 0 1213 #> 5074 TCGA-WY-A85A-01 0 1320 0 1320 NA NA 0 1320 #> 5075 TCGA-WY-A85B-01 0 1393 0 1393 0 1393 0 1393 #> 5076 TCGA-WY-A85C-01 0 1426 0 1426 NA NA 1 809 #> 5077 TCGA-WY-A85D-01 0 1147 0 1147 NA NA 1 887 #> 5078 TCGA-WY-A85E-01 0 633 0 633 NA NA 1 532 #> 5079 TCGA-2V-A95S-01 0 NA 0 NA 0 NA 0 NA #> 5080 TCGA-2Y-A9GS-01 1 724 1 724 1 102 1 102 #> 5081 TCGA-2Y-A9GT-01 1 1624 1 1624 1 1083 1 1083 #> 5082 TCGA-2Y-A9GU-01 0 1939 0 1939 0 1939 0 1939 #> 5083 TCGA-2Y-A9GV-01 1 2532 1 2532 0 2532 1 1745 #> 5084 TCGA-2Y-A9GW-01 1 1271 1 1271 1 1229 1 1229 #> 5085 TCGA-2Y-A9GX-01 0 2442 0 2442 NA NA 1 2133 #> 5086 TCGA-2Y-A9GY-01 1 757 1 757 1 637 1 637 #> 5087 TCGA-2Y-A9GZ-01 1 848 1 848 1 719 1 719 #> 5088 TCGA-2Y-A9H0-01 0 3675 0 3675 0 3675 0 3675 #> 5089 TCGA-2Y-A9H1-01 1 1229 1 1229 1 321 1 321 #> 5090 TCGA-2Y-A9H2-01 0 1731 0 1731 0 1731 0 1731 #> 5091 TCGA-2Y-A9H3-01 0 1516 0 1516 1 22 1 22 #> 5092 TCGA-2Y-A9H4-01 0 1452 0 1452 0 1452 0 1452 #> 5093 TCGA-2Y-A9H5-01 1 555 1 555 1 258 1 258 #> 5094 TCGA-2Y-A9H6-01 0 357 0 357 0 357 0 357 #> 5095 TCGA-2Y-A9H7-01 0 1168 0 1168 1 1117 1 1117 #> 5096 TCGA-2Y-A9H8-01 1 633 1 633 1 398 1 398 #> 5097 TCGA-2Y-A9H9-01 0 697 0 697 1 59 1 59 #> 5098 TCGA-2Y-A9HA-01 1 36 1 36 NA NA 1 36 #> 5099 TCGA-2Y-A9HB-01 0 260 0 260 0 260 0 260 #> 5100 TCGA-3K-AAZ8-01 0 396 0 396 NA NA 1 151 #> 5101 TCGA-4R-AA8I-01 1 262 1 262 1 158 1 158 #> 5102 TCGA-5C-A9VG-01 0 328 0 328 0 328 0 328 #> 5103 TCGA-5C-A9VH-01 0 322 0 322 0 322 0 322 #> 5104 TCGA-5C-AAPD-01 0 20 0 20 0 20 0 20 #> 5105 TCGA-5R-AA1C-01 0 520 0 520 0 520 0 520 #> 5106 TCGA-5R-AA1D-01 0 449 0 449 0 449 0 449 #> 5107 TCGA-5R-AAAM-01 1 46 0 46 0 46 0 46 #> 5108 TCGA-BC-4072-01 1 1490 1 1490 NA NA 1 475 #> 5109 TCGA-BC-4073-01 0 849 0 849 NA NA 0 849 #> 5110 TCGA-BC-A10Q-01 1 1135 1 1135 NA NA 1 340 #> 5111 TCGA-BC-A10Q-11 1 1135 1 1135 NA NA 1 340 #> 5112 TCGA-BC-A10R-01 1 308 1 308 1 199 1 199 #> 5113 TCGA-BC-A10R-11 1 308 1 308 1 199 1 199 #> 5114 TCGA-BC-A10S-01 1 1423 1 1423 1 1130 1 1130 #> 5115 TCGA-BC-A10T-01 1 837 1 837 NA NA 1 598 #> 5116 TCGA-BC-A10T-11 1 837 1 837 NA NA 1 598 #> 5117 TCGA-BC-A10U-01 1 837 1 837 NA NA 1 586 #> 5118 TCGA-BC-A10U-11 1 837 1 837 NA NA 1 586 #> 5119 TCGA-BC-A10W-01 1 91 1 91 NA NA 1 91 #> 5120 TCGA-BC-A10W-11 1 91 1 91 NA NA 1 91 #> 5121 TCGA-BC-A10X-01 1 770 0 770 0 770 0 770 #> 5122 TCGA-BC-A10X-11 1 770 0 770 0 770 0 770 #> 5123 TCGA-BC-A10Y-01 1 711 1 711 1 400 1 400 #> 5124 TCGA-BC-A10Y-11 1 711 1 711 1 400 1 400 #> 5125 TCGA-BC-A10Z-01 1 34 0 34 0 34 0 34 #> 5126 TCGA-BC-A10Z-11 1 34 0 34 0 34 0 34 #> 5127 TCGA-BC-A110-01 1 2116 1 2116 1 2057 1 2057 #> 5128 TCGA-BC-A110-11 1 2116 1 2116 1 2057 1 2057 #> 5129 TCGA-BC-A112-01 1 153 0 153 0 153 0 153 #> 5130 TCGA-BC-A216-01 0 1351 0 1351 0 1351 0 1351 #> 5131 TCGA-BC-A216-11 0 1351 0 1351 0 1351 0 1351 #> 5132 TCGA-BC-A217-01 1 1397 0 1397 0 1397 0 1397 #> 5133 TCGA-BC-A3KF-01 0 8 0 8 0 8 0 8 #> 5134 TCGA-BC-A3KG-01 0 680 0 680 1 209 1 209 #> 5135 TCGA-BC-A5W4-01 1 547 0 547 NA NA 1 384 #> 5136 TCGA-BC-A69H-01 0 444 0 444 0 444 0 444 #> 5137 TCGA-BC-A69I-01 0 387 0 387 0 387 0 387 #> 5138 TCGA-BC-A8YO-01 0 562 0 562 1 220 1 220 #> 5139 TCGA-BD-A2L6-01 0 1363 0 1363 1 415 1 415 #> 5140 TCGA-BD-A2L6-11 0 1363 0 1363 1 415 1 415 #> 5141 TCGA-BD-A3EP-01 0 409 0 409 0 409 0 409 #> 5142 TCGA-BD-A3EP-11 0 409 0 409 0 409 0 409 #> 5143 TCGA-BD-A3ER-01 0 1115 0 1115 1 226 1 226 #> 5144 TCGA-BW-A5NO-01 0 20 0 20 NA NA 0 20 #> 5145 TCGA-BW-A5NP-01 0 0 0 0 NA NA 1 102 #> 5146 TCGA-BW-A5NQ-01 0 0 0 0 NA NA 0 0 #> 5147 TCGA-CC-5258-01 1 129 0 129 NA NA 0 129 #> 5148 TCGA-CC-5259-01 0 250 0 250 1 180 1 180 #> 5149 TCGA-CC-5260-01 1 87 0 87 NA NA 0 87 #> 5150 TCGA-CC-5261-01 1 97 0 97 NA NA 0 97 #> 5151 TCGA-CC-5262-01 1 103 0 103 NA NA 0 103 #> 5152 TCGA-CC-5263-01 1 129 0 129 NA NA 0 129 #> 5153 TCGA-CC-5264-01 1 102 0 102 NA NA 0 102 #> 5154 TCGA-CC-A123-01 0 219 0 219 NA NA 1 145 #> 5155 TCGA-CC-A1HT-01 1 101 0 101 NA NA 0 101 #> 5156 TCGA-CC-A3M9-01 1 300 1 300 1 219 1 219 #> 5157 TCGA-CC-A3MA-01 1 303 1 303 1 261 1 261 #> 5158 TCGA-CC-A3MB-01 1 315 1 315 0 315 1 260 #> 5159 TCGA-CC-A3MC-01 0 363 0 363 1 297 1 297 #> 5160 TCGA-CC-A5UC-01 1 347 1 347 0 347 1 312 #> 5161 TCGA-CC-A5UD-01 1 304 1 304 1 182 1 182 #> 5162 TCGA-CC-A5UE-01 1 272 1 272 1 175 1 175 #> 5163 TCGA-CC-A7IE-01 1 217 1 217 0 217 1 169 #> 5164 TCGA-CC-A7IF-01 1 649 1 649 0 649 1 254 #> 5165 TCGA-CC-A7IG-01 1 299 1 299 1 195 1 195 #> 5166 TCGA-CC-A7IH-01 0 365 0 365 0 365 0 365 #> 5167 TCGA-CC-A7II-01 0 399 0 399 1 278 1 278 #> 5168 TCGA-CC-A7IJ-01 0 382 0 382 0 382 0 382 #> 5169 TCGA-CC-A7IK-01 1 262 1 262 1 150 1 150 #> 5170 TCGA-CC-A7IL-01 1 278 1 278 1 179 1 179 #> 5171 TCGA-CC-A8HS-01 1 300 1 300 1 201 1 201 #> 5172 TCGA-CC-A8HT-01 1 140 1 140 1 83 1 83 #> 5173 TCGA-CC-A8HU-01 1 344 1 344 1 301 1 301 #> 5174 TCGA-CC-A8HV-01 1 279 1 279 1 149 1 149 #> 5175 TCGA-CC-A9FS-01 0 211 0 211 0 211 1 109 #> 5176 TCGA-CC-A9FU-01 0 0 0 0 0 0 0 0 #> 5177 TCGA-CC-A9FV-01 0 0 0 0 0 0 0 0 #> 5178 TCGA-CC-A9FW-01 0 248 0 248 1 153 1 153 #> 5179 TCGA-DD-A113-01 0 2425 0 2425 1 1676 1 1676 #> 5180 TCGA-DD-A113-11 0 2425 0 2425 1 1676 1 1676 #> 5181 TCGA-DD-A114-01 1 1149 0 1149 0 1149 0 1149 #> 5182 TCGA-DD-A114-11 1 1149 0 1149 0 1149 0 1149 #> 5183 TCGA-DD-A115-01 1 2542 1 2542 1 469 1 469 #> 5184 TCGA-DD-A116-01 1 1622 0 1622 1 828 1 828 #> 5185 TCGA-DD-A116-11 1 1622 0 1622 1 828 1 828 #> 5186 TCGA-DD-A118-01 0 3437 0 3437 1 658 1 658 #> 5187 TCGA-DD-A118-11 0 3437 0 3437 1 658 1 658 #> 5188 TCGA-DD-A119-01 1 223 NA 223 NA NA 0 223 #> 5189 TCGA-DD-A119-11 1 223 NA 223 NA NA 0 223 #> 5190 TCGA-DD-A11A-01 0 79 0 79 0 79 0 79 #> 5191 TCGA-DD-A11A-11 0 79 0 79 0 79 0 79 #> 5192 TCGA-DD-A11B-01 1 14 0 14 NA NA 0 14 #> 5193 TCGA-DD-A11B-11 1 14 0 14 NA NA 0 14 #> 5194 TCGA-DD-A11C-01 0 662 0 662 NA NA 0 662 #> 5195 TCGA-DD-A11C-11 0 662 0 662 NA NA 0 662 #> 5196 TCGA-DD-A11D-01 1 1560 1 1560 1 498 1 498 #> 5197 TCGA-DD-A11D-11 1 1560 1 1560 1 498 1 498 #> 5198 TCGA-DD-A1EA-01 0 2415 0 2415 1 754 1 754 #> 5199 TCGA-DD-A1EB-01 0 2017 0 2017 1 505 1 505 #> 5200 TCGA-DD-A1EB-11 0 2017 0 2017 1 505 1 505 #> 5201 TCGA-DD-A1EC-01 0 602 0 602 1 299 1 299 #> 5202 TCGA-DD-A1EC-11 0 602 0 602 1 299 1 299 #> 5203 TCGA-DD-A1ED-01 0 2301 0 2301 0 2301 0 2301 #> 5204 TCGA-DD-A1EE-01 1 349 1 349 1 44 1 44 #> 5205 TCGA-DD-A1EE-11 1 349 1 349 1 44 1 44 #> 5206 TCGA-DD-A1EF-01 1 394 1 394 NA NA 1 394 #> 5207 TCGA-DD-A1EG-01 1 1372 1 1372 1 875 1 875 #> 5208 TCGA-DD-A1EG-11 1 1372 1 1372 1 875 1 875 #> 5209 TCGA-DD-A1EH-01 0 1495 0 1495 1 120 1 120 #> 5210 TCGA-DD-A1EH-11 0 1495 0 1495 1 120 1 120 #> 5211 TCGA-DD-A1EI-01 0 183 0 183 0 183 0 183 #> 5212 TCGA-DD-A1EI-11 0 183 0 183 0 183 0 183 #> 5213 TCGA-DD-A1EJ-01 1 1005 1 1005 1 263 1 263 #> 5214 TCGA-DD-A1EJ-11 1 1005 1 1005 1 263 1 263 #> 5215 TCGA-DD-A1EK-01 1 558 1 558 NA NA 1 167 #> 5216 TCGA-DD-A1EL-01 1 415 1 415 NA NA 1 415 #> 5217 TCGA-DD-A1EL-11 1 415 1 415 NA NA 1 415 #> 5218 TCGA-DD-A39V-01 1 643 1 643 1 455 1 455 #> 5219 TCGA-DD-A39V-11 1 643 1 643 1 455 1 455 #> 5220 TCGA-DD-A39W-01 1 827 NA 827 0 827 0 827 #> 5221 TCGA-DD-A39W-11 1 827 NA 827 0 827 0 827 #> 5222 TCGA-DD-A39X-01 1 1694 1 1694 1 1032 1 1032 #> 5223 TCGA-DD-A39X-11 1 1694 1 1694 1 1032 1 1032 #> 5224 TCGA-DD-A39Y-01 1 171 0 171 0 171 0 171 #> 5225 TCGA-DD-A39Z-01 1 601 0 601 0 601 0 601 #> 5226 TCGA-DD-A39Z-11 1 601 0 601 0 601 0 601 #> 5227 TCGA-DD-A3A1-01 1 233 0 233 0 233 0 233 #> 5228 TCGA-DD-A3A1-11 1 233 0 233 0 233 0 233 #> 5229 TCGA-DD-A3A2-01 1 2131 0 2131 0 2131 0 2131 #> 5230 TCGA-DD-A3A2-11 1 2131 0 2131 0 2131 0 2131 #> 5231 TCGA-DD-A3A3-01 1 535 NA 535 0 535 0 535 #> 5232 TCGA-DD-A3A3-11 1 535 NA 535 0 535 0 535 #> 5233 TCGA-DD-A3A4-01 1 612 1 612 1 87 1 87 #> 5234 TCGA-DD-A3A4-11 1 612 1 612 1 87 1 87 #> 5235 TCGA-DD-A3A5-01 1 3125 1 3125 1 84 1 84 #> 5236 TCGA-DD-A3A5-11 1 3125 1 3125 1 84 1 84 #> 5237 TCGA-DD-A3A6-01 1 3258 0 3258 0 3258 0 3258 #> 5238 TCGA-DD-A3A6-11 1 3258 0 3258 0 3258 0 3258 #> 5239 TCGA-DD-A3A7-01 1 419 1 419 1 144 1 144 #> 5240 TCGA-DD-A3A8-01 1 11 0 11 0 11 0 11 #> 5241 TCGA-DD-A3A8-11 1 11 0 11 0 11 0 11 #> 5242 TCGA-DD-A3A9-01 1 931 1 931 NA NA 1 289 #> 5243 TCGA-DD-A4NA-01 0 1008 0 1008 0 1008 0 1008 #> 5244 TCGA-DD-A4NB-01 0 989 0 989 1 912 1 912 #> 5245 TCGA-DD-A4ND-01 0 2746 0 2746 0 2746 1 15 #> 5246 TCGA-DD-A4NE-01 1 660 1 660 1 190 1 190 #> 5247 TCGA-DD-A4NF-01 0 942 0 942 1 656 1 656 #> 5248 TCGA-DD-A4NG-01 1 802 1 802 1 430 1 430 #> 5249 TCGA-DD-A4NH-01 0 917 0 917 1 161 1 161 #> 5250 TCGA-DD-A4NI-01 0 816 0 816 0 816 0 816 #> 5251 TCGA-DD-A4NJ-01 0 928 0 928 1 549 1 549 #> 5252 TCGA-DD-A4NK-01 1 1210 1 1210 1 89 1 89 #> 5253 TCGA-DD-A4NL-01 0 1711 0 1711 0 1711 0 1711 #> 5254 TCGA-DD-A4NN-01 1 899 1 899 1 166 1 166 #> 5255 TCGA-DD-A4NO-01 0 2245 0 2245 1 990 1 990 #> 5256 TCGA-DD-A4NP-01 0 3308 0 3308 1 1286 1 1286 #> 5257 TCGA-DD-A4NQ-01 1 373 1 373 1 126 1 126 #> 5258 TCGA-DD-A4NS-01 1 2456 1 2456 1 893 1 893 #> 5259 TCGA-DD-A4NV-01 0 2398 0 2398 0 2398 0 2398 #> 5260 TCGA-DD-A73A-01 0 728 0 728 0 728 0 728 #> 5261 TCGA-DD-A73B-01 1 283 1 283 1 240 1 240 #> 5262 TCGA-DD-A73C-01 0 701 0 701 1 566 1 566 #> 5263 TCGA-DD-A73D-01 0 693 0 693 1 592 1 592 #> 5264 TCGA-DD-A73E-01 0 44 0 44 0 44 0 44 #> 5265 TCGA-DD-A73F-01 0 1085 0 1085 0 1085 0 1085 #> 5266 TCGA-DD-A73G-01 0 3478 0 3478 0 3478 0 3478 #> 5267 TCGA-DD-AA3A-01 1 410 0 410 0 410 0 410 #> 5268 TCGA-DD-AAC8-01 1 16 0 16 0 16 0 16 #> 5269 TCGA-DD-AAC9-01 0 347 0 347 0 347 0 347 #> 5270 TCGA-DD-AACA-02 0 2301 0 2301 1 776 1 776 #> 5271 TCGA-DD-AACA-01 0 2301 0 2301 1 776 1 776 #> 5272 TCGA-DD-AACB-01 0 2324 0 2324 0 2324 0 2324 #> 5273 TCGA-DD-AACC-01 1 1685 1 1685 1 537 1 537 #> 5274 TCGA-DD-AACE-01 0 2184 0 2184 1 1279 1 1279 #> 5275 TCGA-DD-AACF-01 1 365 1 365 1 119 1 119 #> 5276 TCGA-DD-AACG-01 1 469 1 469 1 125 1 125 #> 5277 TCGA-DD-AACH-01 1 195 0 195 1 83 1 83 #> 5278 TCGA-DD-AACI-01 0 1618 0 1618 1 1432 1 1432 #> 5279 TCGA-DD-AACJ-01 0 2102 0 2102 1 100 1 100 #> 5280 TCGA-DD-AACK-01 0 9 0 9 0 9 0 9 #> 5281 TCGA-DD-AACL-01 1 107 NA 107 0 107 0 107 #> 5282 TCGA-DD-AACN-01 0 1302 0 1302 1 357 1 357 #> 5283 TCGA-DD-AACO-01 0 1876 0 1876 1 479 1 479 #> 5284 TCGA-DD-AACP-01 0 415 0 415 0 415 0 415 #> 5285 TCGA-DD-AACQ-01 1 432 1 432 1 105 1 105 #> 5286 TCGA-DD-AACS-01 0 1804 0 1804 0 1804 0 1804 #> 5287 TCGA-DD-AACT-01 0 1562 0 1562 0 1562 0 1562 #> 5288 TCGA-DD-AACU-01 0 1567 0 1567 0 1567 0 1567 #> 5289 TCGA-DD-AACV-01 0 1531 0 1531 1 344 1 344 #> 5290 TCGA-DD-AACW-01 0 1424 0 1424 0 1424 0 1424 #> 5291 TCGA-DD-AACX-01 0 170 0 170 1 42 1 42 #> 5292 TCGA-DD-AACY-01 0 1450 0 1450 1 776 1 776 #> 5293 TCGA-DD-AACZ-01 1 171 0 171 1 88 1 88 #> 5294 TCGA-DD-AAD0-01 0 137 0 137 1 47 1 47 #> 5295 TCGA-DD-AAD1-01 0 564 0 564 NA NA 1 127 #> 5296 TCGA-DD-AAD2-01 0 658 0 658 0 658 0 658 #> 5297 TCGA-DD-AAD3-01 0 1295 0 1295 0 1295 0 1295 #> 5298 TCGA-DD-AAD5-01 0 1345 0 1345 1 130 1 130 #> 5299 TCGA-DD-AAD6-01 0 672 0 672 1 50 1 50 #> 5300 TCGA-DD-AAD8-01 0 1219 0 1219 0 1219 0 1219 #> 5301 TCGA-DD-AADA-01 0 1233 0 1233 0 1233 0 1233 #> 5302 TCGA-DD-AADB-01 0 1242 0 1242 0 1242 0 1242 #> 5303 TCGA-DD-AADC-01 1 425 1 425 1 101 1 101 #> 5304 TCGA-DD-AADD-01 0 1231 0 1231 0 1231 0 1231 #> 5305 TCGA-DD-AADF-01 1 115 0 115 0 115 0 115 #> 5306 TCGA-DD-AADG-01 0 1145 0 1145 1 270 1 270 #> 5307 TCGA-DD-AADI-01 0 1085 0 1085 0 1085 0 1085 #> 5308 TCGA-DD-AADJ-01 0 1066 0 1066 0 1066 0 1066 #> 5309 TCGA-DD-AADK-01 0 1049 0 1049 0 1049 0 1049 #> 5310 TCGA-DD-AADL-01 0 636 0 636 0 636 0 636 #> 5311 TCGA-DD-AADM-01 1 12 0 12 0 12 0 12 #> 5312 TCGA-DD-AADN-01 0 898 0 898 0 898 0 898 #> 5313 TCGA-DD-AADO-01 0 453 0 453 0 453 0 453 #> 5314 TCGA-DD-AADP-01 0 458 0 458 0 458 0 458 #> 5315 TCGA-DD-AADQ-01 0 436 0 436 0 436 0 436 #> 5316 TCGA-DD-AADR-01 0 2028 0 2028 1 1700 1 1700 #> 5317 TCGA-DD-AADS-01 0 474 0 474 0 474 0 474 #> 5318 TCGA-DD-AADU-01 0 554 0 554 0 554 0 554 #> 5319 TCGA-DD-AADV-01 0 574 0 574 0 574 0 574 #> 5320 TCGA-DD-AADW-01 0 587 0 587 1 386 1 386 #> 5321 TCGA-DD-AADY-01 0 555 0 555 0 555 0 555 #> 5322 TCGA-DD-AAE0-01 0 555 0 555 0 555 0 555 #> 5323 TCGA-DD-AAE1-01 0 552 0 552 0 552 0 552 #> 5324 TCGA-DD-AAE2-01 0 638 0 638 0 638 0 638 #> 5325 TCGA-DD-AAE3-01 0 566 0 566 0 566 0 566 #> 5326 TCGA-DD-AAE4-01 0 608 0 608 1 111 1 111 #> 5327 TCGA-DD-AAE6-01 0 141 0 141 1 105 1 105 #> 5328 TCGA-DD-AAE7-01 0 644 0 644 0 644 0 644 #> 5329 TCGA-DD-AAE9-01 0 722 0 722 0 722 0 722 #> 5330 TCGA-DD-AAEA-01 0 575 0 575 0 575 0 575 #> 5331 TCGA-DD-AAEB-01 0 478 0 478 0 478 0 478 #> 5332 TCGA-DD-AAED-01 0 763 0 763 1 198 1 198 #> 5333 TCGA-DD-AAEE-01 0 810 0 810 1 224 1 224 #> 5334 TCGA-DD-AAEG-01 0 719 0 719 0 719 0 719 #> 5335 TCGA-DD-AAEH-01 0 784 0 784 1 644 1 644 #> 5336 TCGA-DD-AAEI-01 0 1531 0 1531 1 491 1 491 #> 5337 TCGA-DD-AAEK-01 0 1067 0 1067 0 1067 0 1067 #> 5338 TCGA-DD-AAVP-01 0 2752 0 2752 1 903 1 903 #> 5339 TCGA-DD-AAVQ-01 0 2728 0 2728 1 1509 1 1509 #> 5340 TCGA-DD-AAVR-01 0 2513 0 2513 0 2513 0 2513 #> 5341 TCGA-DD-AAVS-01 0 1823 0 1823 0 1823 0 1823 #> 5342 TCGA-DD-AAVU-01 0 2202 0 2202 1 1630 1 1630 #> 5343 TCGA-DD-AAVV-01 0 2455 0 2455 0 2455 0 2455 #> 5344 TCGA-DD-AAVW-01 0 2317 0 2317 0 2317 0 2317 #> 5345 TCGA-DD-AAVX-01 0 1718 0 1718 1 393 1 393 #> 5346 TCGA-DD-AAVY-01 0 1970 0 1970 0 1970 0 1970 #> 5347 TCGA-DD-AAVZ-01 0 1900 0 1900 0 1900 0 1900 #> 5348 TCGA-DD-AAW0-01 0 2015 0 2015 0 2015 0 2015 #> 5349 TCGA-DD-AAW1-01 0 1989 0 1989 0 1989 0 1989 #> 5350 TCGA-DD-AAW2-01 0 1855 0 1855 1 391 1 391 #> 5351 TCGA-DD-AAW3-01 0 1633 0 1633 0 1633 0 1633 #> 5352 TCGA-ED-A459-01 0 910 0 910 0 910 0 910 #> 5353 TCGA-ED-A4XI-01 0 819 0 819 0 819 0 819 #> 5354 TCGA-ED-A5KG-01 0 854 0 854 0 854 1 110 #> 5355 TCGA-ED-A627-01 0 423 0 423 0 423 0 423 #> 5356 TCGA-ED-A66X-01 0 406 0 406 1 124 1 124 #> 5357 TCGA-ED-A66Y-01 1 296 0 296 0 296 0 296 #> 5358 TCGA-ED-A7PX-01 0 6 0 6 0 6 0 6 #> 5359 TCGA-ED-A7PY-01 0 390 0 390 0 390 0 390 #> 5360 TCGA-ED-A7PZ-01 0 6 0 6 0 6 0 6 #> 5361 TCGA-ED-A7XO-01 0 427 0 427 1 262 1 262 #> 5362 TCGA-ED-A7XP-01 0 400 0 400 1 187 1 187 #> 5363 TCGA-ED-A82E-01 0 408 0 408 0 408 0 408 #> 5364 TCGA-ED-A8O5-01 0 406 0 406 0 406 0 406 #> 5365 TCGA-ED-A8O6-01 1 56 0 56 0 56 0 56 #> 5366 TCGA-ED-A97K-01 0 6 0 6 0 6 0 6 #> 5367 TCGA-EP-A12J-01 0 570 0 570 0 570 0 570 #> 5368 TCGA-EP-A12J-11 0 570 0 570 0 570 0 570 #> 5369 TCGA-EP-A26S-01 0 608 0 608 NA NA 0 608 #> 5370 TCGA-EP-A26S-11 0 608 0 608 NA NA 0 608 #> 5371 TCGA-EP-A2KA-01 1 627 1 627 1 293 1 293 #> 5372 TCGA-EP-A2KB-01 1 596 1 596 1 161 1 161 #> 5373 TCGA-EP-A2KC-01 1 19 0 19 0 19 0 19 #> 5374 TCGA-EP-A3JL-01 0 303 0 303 NA NA 0 303 #> 5375 TCGA-EP-A3RK-01 0 363 0 363 NA NA 1 320 #> 5376 TCGA-EP-A3RK-11 0 363 0 363 NA NA 1 320 #> 5377 TCGA-ES-A2HS-01 1 688 0 688 0 688 0 688 #> 5378 TCGA-ES-A2HT-01 1 438 0 438 0 438 0 438 #> 5379 TCGA-ES-A2HT-11 1 438 0 438 0 438 0 438 #> 5380 TCGA-FV-A23B-01 1 1852 1 1852 1 1453 1 1453 #> 5381 TCGA-FV-A23B-11 1 1852 1 1852 1 1453 1 1453 #> 5382 TCGA-FV-A2QQ-01 0 729 0 729 0 729 0 729 #> 5383 TCGA-FV-A2QR-01 1 581 1 581 NA NA 1 561 #> 5384 TCGA-FV-A2QR-11 1 581 1 581 NA NA 1 561 #> 5385 TCGA-FV-A3I0-01 0 848 0 848 1 159 1 159 #> 5386 TCGA-FV-A3I0-11 0 848 0 848 1 159 1 159 #> 5387 TCGA-FV-A3I1-01 1 247 0 247 0 247 0 247 #> 5388 TCGA-FV-A3I1-11 1 247 0 247 0 247 0 247 #> 5389 TCGA-FV-A3R2-01 1 194 0 194 0 194 0 194 #> 5390 TCGA-FV-A3R2-11 1 194 0 194 0 194 0 194 #> 5391 TCGA-FV-A3R3-01 1 366 0 366 0 366 0 366 #> 5392 TCGA-FV-A495-01 0 1 0 1 0 1 0 1 #> 5393 TCGA-FV-A496-01 0 10 0 10 0 10 0 10 #> 5394 TCGA-FV-A4ZP-01 1 2486 0 2486 NA NA 0 2486 #> 5395 TCGA-FV-A4ZQ-01 0 12 0 12 0 12 0 12 #> 5396 TCGA-G3-A25S-01 1 416 1 416 NA NA 1 37 #> 5397 TCGA-G3-A25T-01 0 1553 0 1553 1 452 1 452 #> 5398 TCGA-G3-A25U-01 0 1636 0 1636 0 1636 0 1636 #> 5399 TCGA-G3-A25V-01 0 860 0 860 1 489 1 489 #> 5400 TCGA-G3-A25X-01 0 1779 0 1779 0 1779 0 1779 #> 5401 TCGA-G3-A25Y-01 1 452 1 452 1 355 1 355 #> 5402 TCGA-G3-A25Z-01 0 655 0 655 0 655 0 655 #> 5403 TCGA-G3-A3CG-01 0 673 0 673 NA NA 1 329 #> 5404 TCGA-G3-A3CH-01 0 780 0 780 1 116 1 116 #> 5405 TCGA-G3-A3CH-11 0 780 0 780 1 116 1 116 #> 5406 TCGA-G3-A3CI-01 0 180 0 180 0 180 0 180 #> 5407 TCGA-G3-A3CJ-01 0 594 0 594 1 296 1 296 #> 5408 TCGA-G3-A3CK-01 0 585 0 585 0 585 0 585 #> 5409 TCGA-G3-A5SI-01 1 768 1 768 1 348 1 348 #> 5410 TCGA-G3-A5SJ-01 0 698 0 698 1 308 1 308 #> 5411 TCGA-G3-A5SK-01 0 744 0 744 1 483 1 483 #> 5412 TCGA-G3-A5SL-01 0 621 0 621 0 621 0 621 #> 5413 TCGA-G3-A5SM-01 0 520 0 520 1 252 1 252 #> 5414 TCGA-G3-A6UC-01 0 671 0 671 1 639 1 639 #> 5415 TCGA-G3-A7M5-01 0 447 0 447 0 447 0 447 #> 5416 TCGA-G3-A7M6-01 0 632 0 632 1 293 1 293 #> 5417 TCGA-G3-A7M7-01 0 361 0 361 0 361 0 361 #> 5418 TCGA-G3-A7M8-01 0 430 0 430 NA NA 0 430 #> 5419 TCGA-G3-A7M9-01 1 56 NA 56 0 56 0 56 #> 5420 TCGA-G3-AAUZ-01 0 480 0 480 0 480 0 480 #> 5421 TCGA-G3-AAV0-01 0 476 0 476 0 476 0 476 #> 5422 TCGA-G3-AAV1-01 1 359 1 359 1 49 1 49 #> 5423 TCGA-G3-AAV2-01 0 372 0 372 0 372 0 372 #> 5424 TCGA-G3-AAV3-01 0 412 0 412 0 412 0 412 #> 5425 TCGA-G3-AAV4-01 1 27 0 27 0 27 0 27 #> 5426 TCGA-G3-AAV5-01 0 354 0 354 1 117 1 117 #> 5427 TCGA-G3-AAV6-01 1 65 1 65 1 44 1 44 #> 5428 TCGA-G3-AAV7-01 0 361 0 361 0 361 0 361 #> 5429 TCGA-GJ-A3OU-01 0 879 0 879 NA NA 1 879 #> 5430 TCGA-GJ-A6C0-01 1 31 NA 31 NA NA 0 31 #> 5431 TCGA-GJ-A9DB-01 1 67 NA 67 0 67 0 67 #> 5432 TCGA-HP-A5MZ-01 1 91 0 91 0 91 0 91 #> 5433 TCGA-HP-A5N0-01 1 1147 1 1147 1 179 1 179 #> 5434 TCGA-K7-A5RF-01 0 631 0 631 1 205 1 205 #> 5435 TCGA-K7-A5RG-01 0 519 0 519 0 519 0 519 #> 5436 TCGA-K7-A6G5-01 0 512 0 512 NA NA 0 512 #> 5437 TCGA-K7-AAU7-01 0 359 0 359 NA NA 1 58 #> 5438 TCGA-KR-A7K0-01 1 65 0 65 0 65 0 65 #> 5439 TCGA-KR-A7K2-01 0 829 0 829 0 829 0 829 #> 5440 TCGA-KR-A7K7-01 0 951 0 951 1 239 1 239 #> 5441 TCGA-KR-A7K8-01 0 906 0 906 0 906 0 906 #> 5442 TCGA-LG-A6GG-01 0 387 0 387 0 387 0 387 #> 5443 TCGA-LG-A9QC-01 0 425 0 425 0 425 0 425 #> 5444 TCGA-LG-A9QD-01 0 366 0 366 0 366 0 366 #> 5445 TCGA-MI-A75C-01 0 291 0 291 0 291 0 291 #> 5446 TCGA-MI-A75E-01 0 507 0 507 0 507 0 507 #> 5447 TCGA-MI-A75G-01 0 698 0 698 0 698 0 698 #> 5448 TCGA-MI-A75H-01 0 747 0 747 1 301 1 301 #> 5449 TCGA-MI-A75I-01 0 630 0 630 1 265 1 265 #> 5450 TCGA-MR-A520-01 0 229 0 229 NA NA 0 229 #> 5451 TCGA-MR-A8JO-01 0 330 0 330 NA NA 0 330 #> 5452 TCGA-NI-A4U2-01 1 1791 1 1791 1 106 1 106 #> 5453 TCGA-NI-A8LF-01 0 799 0 799 0 799 0 799 #> 5454 TCGA-O8-A75V-01 0 538 0 538 NA NA 0 538 #> 5455 TCGA-PD-A5DF-01 1 639 1 639 NA NA 1 639 #> 5456 TCGA-QA-A7B7-01 0 94 0 94 NA NA 1 88 #> 5457 TCGA-RC-A6M3-01 0 0 0 0 0 0 0 0 #> 5458 TCGA-RC-A6M4-01 0 22 0 22 NA NA 0 22 #> 5459 TCGA-RC-A6M5-01 0 15 0 15 NA NA 0 15 #> 5460 TCGA-RC-A6M6-01 0 9 0 9 NA NA 0 9 #> 5461 TCGA-RC-A7S9-01 0 640 0 640 0 640 0 640 #> 5462 TCGA-RC-A7SB-01 0 588 0 588 0 588 0 588 #> 5463 TCGA-RC-A7SF-01 0 579 0 579 1 502 1 502 #> 5464 TCGA-RC-A7SH-01 0 468 0 468 1 91 1 91 #> 5465 TCGA-RC-A7SK-01 0 472 0 472 1 312 1 312 #> 5466 TCGA-RG-A7D4-01 0 1098 0 1098 0 1098 0 1098 #> 5467 TCGA-T1-A6J8-01 0 23 0 23 NA NA 0 23 #> 5468 TCGA-UB-A7MA-01 0 848 0 848 NA NA 1 221 #> 5469 TCGA-UB-A7MB-01 0 601 0 601 1 48 1 48 #> 5470 TCGA-UB-A7MC-01 0 500 0 500 1 359 1 359 #> 5471 TCGA-UB-A7MD-01 1 52 0 52 0 52 0 52 #> 5472 TCGA-UB-A7ME-01 0 486 0 486 0 486 0 486 #> 5473 TCGA-UB-A7MF-01 1 214 1 214 1 133 1 133 #> 5474 TCGA-UB-AA0U-01 0 327 0 327 NA NA 1 106 #> 5475 TCGA-UB-AA0V-01 0 314 0 314 0 314 0 314 #> 5476 TCGA-WJ-A86L-01 0 345 0 345 0 345 0 345 #> 5477 TCGA-WQ-A9G7-01 0 30 0 30 0 30 0 30 #> 5478 TCGA-WQ-AB4B-01 0 395 0 395 1 273 1 273 #> 5479 TCGA-WX-AA44-01 0 615 0 615 NA NA 1 246 #> 5480 TCGA-WX-AA46-01 0 756 0 756 0 756 0 756 #> 5481 TCGA-WX-AA47-01 1 556 1 556 1 103 1 103 #> 5482 TCGA-XR-A8TC-01 0 1339 0 1339 0 1339 0 1339 #> 5483 TCGA-XR-A8TD-01 0 1030 0 1030 0 1030 0 1030 #> 5484 TCGA-XR-A8TE-01 0 925 0 925 1 210 1 210 #> 5485 TCGA-XR-A8TF-01 1 693 0 693 1 231 1 231 #> 5486 TCGA-XR-A8TG-01 0 898 0 898 1 350 1 350 #> 5487 TCGA-YA-A8S7-01 1 412 1 412 1 398 1 398 #> 5488 TCGA-ZP-A9CV-01 1 1088 1 1088 NA NA 1 1088 #> 5489 TCGA-ZP-A9CY-01 0 782 0 782 0 782 0 782 #> 5490 TCGA-ZP-A9CZ-01 0 706 0 706 0 706 0 706 #> 5491 TCGA-ZP-A9D0-01 0 1091 0 1091 0 1091 0 1091 #> 5492 TCGA-ZP-A9D1-01 0 21 0 21 0 21 0 21 #> 5493 TCGA-ZP-A9D2-01 1 765 1 765 1 315 1 315 #> 5494 TCGA-ZP-A9D4-01 0 395 0 395 0 395 0 395 #> 5495 TCGA-ZS-A9CD-01 1 1386 NA 1386 1 371 1 371 #> 5496 TCGA-ZS-A9CE-01 0 1241 0 1241 0 1241 1 892 #> 5497 TCGA-ZS-A9CF-02 0 2412 0 2412 1 636 1 636 #> 5498 TCGA-ZS-A9CF-01 0 2412 0 2412 1 636 1 636 #> 5499 TCGA-ZS-A9CG-01 0 341 0 341 0 341 0 341 #> 5500 TCGA-05-4244-01 0 0 0 0 NA NA 0 0 #> 5501 TCGA-05-4250-01 1 121 NA 121 NA NA 0 121 #> 5502 TCGA-05-4382-01 0 607 0 607 1 334 1 334 #> 5503 TCGA-05-4384-01 0 426 0 426 NA NA 1 183 #> 5504 TCGA-05-4389-01 0 1369 0 1369 NA NA 0 1369 #> 5505 TCGA-05-4390-01 0 1126 0 1126 NA NA 1 395 #> 5506 TCGA-05-4395-01 1 0 0 0 NA NA 0 0 #> 5507 TCGA-05-4396-01 1 303 NA 303 NA NA 0 303 #> 5508 TCGA-05-4397-01 1 731 NA 731 NA NA 0 731 #> 5509 TCGA-05-4398-01 0 1431 0 1431 0 1431 0 1431 #> 5510 TCGA-05-4402-01 1 244 0 244 NA NA 0 244 #> 5511 TCGA-05-4403-01 0 578 0 578 NA NA 0 578 #> 5512 TCGA-05-4405-01 0 610 0 610 NA NA 0 610 #> 5513 TCGA-05-4410-01 0 0 0 0 NA NA 0 0 #> 5514 TCGA-05-4415-01 1 91 1 91 NA NA 1 60 #> 5515 TCGA-05-4417-01 0 455 0 455 NA NA 0 455 #> 5516 TCGA-05-4418-01 1 274 NA 274 NA NA 0 274 #> 5517 TCGA-05-4420-01 0 912 0 912 0 912 0 912 #> 5518 TCGA-05-4422-01 0 365 0 365 NA NA 0 365 #> 5519 TCGA-05-4424-01 0 913 0 913 NA NA 1 153 #> 5520 TCGA-05-4425-01 0 669 0 669 NA NA 0 669 #> 5521 TCGA-05-4426-01 0 791 0 791 1 457 1 457 #> 5522 TCGA-05-4427-01 0 791 0 791 0 791 0 791 #> 5523 TCGA-05-4430-01 0 761 0 761 NA NA 0 761 #> 5524 TCGA-05-4432-01 0 761 0 761 0 761 0 761 #> 5525 TCGA-05-4433-01 0 730 0 730 NA NA 0 730 #> 5526 TCGA-05-4434-01 1 457 NA 457 NA NA 0 457 #> 5527 TCGA-05-5420-01 0 457 0 457 NA NA 1 245 #> 5528 TCGA-05-5423-01 0 151 0 151 NA NA 0 151 #> 5529 TCGA-05-5425-01 0 882 0 882 NA NA 1 486 #> 5530 TCGA-05-5428-01 0 670 0 670 0 670 0 670 #> 5531 TCGA-05-5429-01 1 275 0 275 NA NA 0 275 #> 5532 TCGA-05-5715-01 0 62 0 62 NA NA 0 62 #> 5533 TCGA-35-3615-01 0 14 0 14 NA NA 0 14 #> 5534 TCGA-35-4122-01 0 225 0 225 NA NA 0 225 #> 5535 TCGA-35-4123-01 0 182 0 182 NA NA 0 182 #> 5536 TCGA-35-5375-01 0 264 0 264 NA NA 0 264 #> 5537 TCGA-38-4625-01 0 2973 0 2973 0 2973 0 2973 #> 5538 TCGA-38-4625-11 0 2973 0 2973 0 2973 0 2973 #> 5539 TCGA-38-4626-01 0 3674 0 3674 0 3674 1 2518 #> 5540 TCGA-38-4626-11 0 3674 0 3674 0 3674 1 2518 #> 5541 TCGA-38-4627-01 1 1147 NA 1147 0 1147 0 1147 #> 5542 TCGA-38-4627-11 1 1147 NA 1147 0 1147 0 1147 #> 5543 TCGA-38-4628-01 1 1492 1 1492 1 1083 1 1083 #> 5544 TCGA-38-4629-01 1 864 1 864 1 379 1 379 #> 5545 TCGA-38-4630-01 1 1073 1 1073 1 524 1 524 #> 5546 TCGA-38-4631-01 1 354 1 354 NA NA 1 354 #> 5547 TCGA-38-4632-01 1 1357 1 1357 NA NA 1 680 #> 5548 TCGA-38-4632-11 1 1357 1 1357 NA NA 1 680 #> 5549 TCGA-38-6178-01 0 448 0 448 NA NA 0 448 #> 5550 TCGA-38-7271-01 1 800 1 800 1 304 1 304 #> 5551 TCGA-38-A44F-01 0 133 0 133 0 133 0 133 #> 5552 TCGA-44-2655-01 0 1324 0 1324 0 1324 1 1009 #> 5553 TCGA-44-2655-11 0 1324 0 1324 0 1324 1 1009 #> 5554 TCGA-44-2656-01 0 1429 0 1429 0 1429 1 568 #> 5555 TCGA-44-2657-01 0 1351 0 1351 0 1351 0 1351 #> 5556 TCGA-44-2657-11 0 1351 0 1351 0 1351 0 1351 #> 5557 TCGA-44-2659-01 0 1367 0 1367 1 1146 1 1146 #> 5558 TCGA-44-2661-01 0 1159 0 1159 0 1159 0 1159 #> 5559 TCGA-44-2661-11 0 1159 0 1159 0 1159 0 1159 #> 5560 TCGA-44-2662-11 0 1280 0 1280 NA NA 1 245 #> 5561 TCGA-44-2662-01 0 1280 0 1280 NA NA 1 245 #> 5562 TCGA-44-2665-11 0 1301 0 1301 NA NA 0 1301 #> 5563 TCGA-44-2665-01 0 1301 0 1301 NA NA 0 1301 #> 5564 TCGA-44-2666-01 1 97 1 97 NA NA 1 97 #> 5565 TCGA-44-2668-11 1 761 1 761 1 433 1 433 #> 5566 TCGA-44-2668-01 1 761 1 761 1 433 1 433 #> 5567 TCGA-44-3396-01 0 1130 0 1130 0 1130 0 1130 #> 5568 TCGA-44-3396-11 0 1130 0 1130 0 1130 0 1130 #> 5569 TCGA-44-3398-01 0 1163 0 1163 0 1163 0 1163 #> 5570 TCGA-44-3398-11 0 1163 0 1163 0 1163 0 1163 #> 5571 TCGA-44-3917-01 0 1183 0 1183 0 1183 0 1183 #> 5572 TCGA-44-3918-01 0 1036 0 1036 1 511 1 511 #> 5573 TCGA-44-3919-01 1 1026 1 1026 1 921 1 921 #> 5574 TCGA-44-4112-01 1 808 1 808 1 619 1 619 #> 5575 TCGA-44-5643-01 0 1013 0 1013 NA NA 0 1013 #> 5576 TCGA-44-5644-01 0 863 0 863 0 863 0 863 #> 5577 TCGA-44-5645-11 0 852 0 852 0 852 0 852 #> 5578 TCGA-44-5645-01 0 852 0 852 0 852 0 852 #> 5579 TCGA-44-6144-11 0 723 0 723 1 399 1 399 #> 5580 TCGA-44-6145-01 0 595 0 595 0 595 0 595 #> 5581 TCGA-44-6145-11 0 595 0 595 0 595 0 595 #> 5582 TCGA-44-6146-11 0 728 0 728 1 631 1 631 #> 5583 TCGA-44-6146-01 0 728 0 728 1 631 1 631 #> 5584 TCGA-44-6147-11 0 845 0 845 0 845 0 845 #> 5585 TCGA-44-6147-01 0 845 0 845 0 845 0 845 #> 5586 TCGA-44-6148-01 0 704 0 704 0 704 0 704 #> 5587 TCGA-44-6148-11 0 704 0 704 0 704 0 704 #> 5588 TCGA-44-6774-01 0 658 0 658 0 658 0 658 #> 5589 TCGA-44-6775-01 0 705 0 705 1 684 1 684 #> 5590 TCGA-44-6776-01 0 2616 0 2616 0 2616 0 2616 #> 5591 TCGA-44-6776-11 0 2616 0 2616 0 2616 0 2616 #> 5592 TCGA-44-6777-01 1 987 0 987 0 987 0 987 #> 5593 TCGA-44-6777-11 1 987 0 987 0 987 0 987 #> 5594 TCGA-44-6778-01 0 1864 0 1864 0 1864 0 1864 #> 5595 TCGA-44-6778-11 0 1864 0 1864 0 1864 0 1864 #> 5596 TCGA-44-6779-01 1 500 1 500 NA NA 1 232 #> 5597 TCGA-44-7659-01 0 691 0 691 0 691 0 691 #> 5598 TCGA-44-7660-01 0 592 0 592 NA NA 1 253 #> 5599 TCGA-44-7661-01 1 557 1 557 1 335 1 335 #> 5600 TCGA-44-7662-01 0 218 0 218 0 218 0 218 #> 5601 TCGA-44-7667-01 0 1097 0 1097 0 1097 0 1097 #> 5602 TCGA-44-7669-01 1 574 1 574 1 390 1 390 #> 5603 TCGA-44-7670-01 0 882 0 882 0 882 0 882 #> 5604 TCGA-44-7671-01 0 889 0 889 1 883 1 883 #> 5605 TCGA-44-7672-01 0 719 0 719 0 719 0 719 #> 5606 TCGA-44-8117-01 0 385 0 385 0 385 0 385 #> 5607 TCGA-44-8119-01 0 285 0 285 0 285 0 285 #> 5608 TCGA-44-8120-01 0 260 0 260 0 260 0 260 #> 5609 TCGA-44-A479-01 0 486 0 486 0 486 1 437 #> 5610 TCGA-44-A47A-01 0 466 0 466 1 397 1 397 #> 5611 TCGA-44-A47B-01 0 287 0 287 0 287 0 287 #> 5612 TCGA-44-A47G-01 0 351 0 351 0 351 0 351 #> 5613 TCGA-44-A4SS-01 0 415 0 415 0 415 0 415 #> 5614 TCGA-44-A4SU-01 1 409 1 409 1 260 1 260 #> 5615 TCGA-49-4486-01 1 2318 1 2318 1 2045 1 2045 #> 5616 TCGA-49-4487-01 1 855 1 855 1 697 1 697 #> 5617 TCGA-49-4488-01 1 869 NA 869 NA NA 1 634 #> 5618 TCGA-49-4490-01 1 385 1 385 NA NA 1 385 #> 5619 TCGA-49-4490-11 1 385 1 385 NA NA 1 385 #> 5620 TCGA-49-4494-01 1 1081 1 1081 NA NA 1 1081 #> 5621 TCGA-49-4501-01 1 1421 1 1421 1 545 1 545 #> 5622 TCGA-49-4505-01 1 428 1 428 1 417 1 417 #> 5623 TCGA-49-4506-01 1 999 NA 999 1 692 1 692 #> 5624 TCGA-49-4507-01 1 268 1 268 NA NA 1 158 #> 5625 TCGA-49-4510-01 1 896 1 896 NA NA 1 502 #> 5626 TCGA-49-4512-01 1 905 1 905 NA NA 1 905 #> 5627 TCGA-49-4512-11 1 905 1 905 NA NA 1 905 #> 5628 TCGA-49-4514-01 0 1700 0 1700 0 1700 0 1700 #> 5629 TCGA-49-6742-01 1 488 1 488 NA NA 1 214 #> 5630 TCGA-49-6742-11 1 488 1 488 NA NA 1 214 #> 5631 TCGA-49-6743-01 0 1621 0 1621 0 1621 0 1621 #> 5632 TCGA-49-6743-11 0 1621 0 1621 0 1621 0 1621 #> 5633 TCGA-49-6744-01 0 1683 0 1683 0 1683 0 1683 #> 5634 TCGA-49-6744-11 0 1683 0 1683 0 1683 0 1683 #> 5635 TCGA-49-6745-01 0 522 0 522 NA NA 0 522 #> 5636 TCGA-49-6745-11 0 522 0 522 NA NA 0 522 #> 5637 TCGA-49-6761-01 0 354 0 354 0 354 0 354 #> 5638 TCGA-49-6761-11 0 354 0 354 0 354 0 354 #> 5639 TCGA-49-6767-01 0 677 0 677 NA NA 0 677 #> 5640 TCGA-49-AAQV-01 1 677 0 677 1 509 1 509 #> 5641 TCGA-49-AAR0-01 0 4765 0 4765 0 4765 0 4765 #> 5642 TCGA-49-AAR2-01 0 2224 0 2224 0 2224 0 2224 #> 5643 TCGA-49-AAR3-01 0 1893 0 1893 1 1893 1 1893 #> 5644 TCGA-49-AAR4-01 1 879 1 879 NA NA 1 879 #> 5645 TCGA-49-AAR9-01 1 260 1 260 NA NA 1 260 #> 5646 TCGA-49-AARE-01 1 1229 1 1229 1 388 1 388 #> 5647 TCGA-49-AARN-01 1 1135 NA 1135 0 1135 0 1135 #> 5648 TCGA-49-AARO-01 0 3759 0 3759 1 1144 1 1144 #> 5649 TCGA-49-AARQ-01 0 6732 0 6732 0 6732 0 6732 #> 5650 TCGA-49-AARR-01 0 4992 0 4992 1 4812 1 1099 #> 5651 TCGA-4B-A93V-01 1 300 1 300 NA NA 1 251 #> 5652 TCGA-50-5044-01 1 624 1 624 NA NA 1 483 #> 5653 TCGA-50-5045-01 1 2174 1 2174 NA NA 1 1433 #> 5654 TCGA-50-5049-01 0 3094 0 3094 NA NA 1 1568 #> 5655 TCGA-50-5051-01 1 478 1 478 NA NA 1 184 #> 5656 TCGA-50-5055-01 1 1830 1 1830 NA NA 1 771 #> 5657 TCGA-50-5066-02 0 1442 0 1442 1 477 1 477 #> 5658 TCGA-50-5066-01 0 1442 0 1442 1 477 1 477 #> 5659 TCGA-50-5068-01 1 1499 1 1499 NA NA 1 686 #> 5660 TCGA-50-5072-01 1 250 1 250 NA NA 1 213 #> 5661 TCGA-50-5930-01 1 282 1 282 NA NA 1 177 #> 5662 TCGA-50-5930-11 1 282 1 282 NA NA 1 177 #> 5663 TCGA-50-5931-01 1 434 1 434 NA NA 1 425 #> 5664 TCGA-50-5931-11 1 434 1 434 NA NA 1 425 #> 5665 TCGA-50-5932-01 1 1235 1 1235 NA NA 1 1090 #> 5666 TCGA-50-5932-11 1 1235 1 1235 NA NA 1 1090 #> 5667 TCGA-50-5933-01 1 2393 0 2393 0 2393 0 2393 #> 5668 TCGA-50-5933-11 1 2393 0 2393 0 2393 0 2393 #> 5669 TCGA-50-5935-01 1 653 0 653 0 653 0 653 #> 5670 TCGA-50-5935-11 1 653 0 653 0 653 0 653 #> 5671 TCGA-50-5936-01 1 257 1 257 NA NA 1 150 #> 5672 TCGA-50-5936-11 1 257 1 257 NA NA 1 150 #> 5673 TCGA-50-5939-01 1 460 0 460 0 460 0 460 #> 5674 TCGA-50-5939-11 1 460 0 460 0 460 0 460 #> 5675 TCGA-50-5941-01 0 1474 0 1474 0 1474 0 1474 #> 5676 TCGA-50-5942-01 0 1847 0 1847 NA NA 1 1378 #> 5677 TCGA-50-5944-01 0 1750 0 1750 0 1750 0 1750 #> 5678 TCGA-50-5946-02 0 1617 0 1617 NA NA 1 221 #> 5679 TCGA-50-5946-01 0 1617 0 1617 NA NA 1 221 #> 5680 TCGA-50-6590-01 1 1288 0 1288 0 1288 0 1288 #> 5681 TCGA-50-6591-01 1 119 1 119 NA NA 1 119 #> 5682 TCGA-50-6592-01 1 777 1 777 NA NA 1 777 #> 5683 TCGA-50-6593-01 1 336 1 336 NA NA 1 266 #> 5684 TCGA-50-6594-01 1 370 1 370 NA NA 1 285 #> 5685 TCGA-50-6595-01 1 189 1 189 NA NA 1 182 #> 5686 TCGA-50-6595-11 1 189 1 189 NA NA 1 182 #> 5687 TCGA-50-6597-01 1 1268 0 1268 NA NA 0 1268 #> 5688 TCGA-50-6673-01 1 22 NA 22 NA NA 0 22 #> 5689 TCGA-50-7109-01 1 308 1 308 NA NA 1 15 #> 5690 TCGA-50-8457-01 0 1125 0 1125 0 1125 0 1125 #> 5691 TCGA-50-8459-01 0 1119 0 1119 NA NA 1 432 #> 5692 TCGA-50-8460-01 0 829 0 829 0 829 0 829 #> 5693 TCGA-53-7624-01 1 1043 1 1043 NA NA 1 400 #> 5694 TCGA-53-7626-01 1 929 1 929 NA NA 1 865 #> 5695 TCGA-53-7813-01 0 424 0 424 NA NA 0 424 #> 5696 TCGA-53-A4EZ-01 0 1071 0 1071 NA NA 0 1071 #> 5697 TCGA-55-1592-01 1 701 1 701 1 452 1 452 #> 5698 TCGA-55-1594-01 0 1178 0 1178 NA NA 0 1178 #> 5699 TCGA-55-1595-01 0 1479 0 1479 0 1479 0 1479 #> 5700 TCGA-55-1596-01 0 2065 0 2065 0 2065 0 2065 #> 5701 TCGA-55-5899-01 0 930 0 930 0 930 0 930 #> 5702 TCGA-55-6543-01 0 435 0 435 0 435 0 435 #> 5703 TCGA-55-6642-01 0 2449 0 2449 0 2449 0 2449 #> 5704 TCGA-55-6712-01 1 171 1 171 NA NA 1 171 #> 5705 TCGA-55-6968-01 1 1293 1 1293 NA NA 1 1293 #> 5706 TCGA-55-6968-11 1 1293 1 1293 NA NA 1 1293 #> 5707 TCGA-55-6969-01 0 1239 0 1239 NA NA 0 1239 #> 5708 TCGA-55-6969-11 0 1239 0 1239 NA NA 0 1239 #> 5709 TCGA-55-6970-01 1 464 1 464 NA NA 1 457 #> 5710 TCGA-55-6970-11 1 464 1 464 NA NA 1 457 #> 5711 TCGA-55-6971-01 0 1400 0 1400 0 1400 0 1400 #> 5712 TCGA-55-6971-11 0 1400 0 1400 0 1400 0 1400 #> 5713 TCGA-55-6972-01 1 1632 0 1632 0 1632 0 1632 #> 5714 TCGA-55-6972-11 1 1632 0 1632 0 1632 0 1632 #> 5715 TCGA-55-6975-01 1 118 1 118 NA NA 1 118 #> 5716 TCGA-55-6975-11 1 118 1 118 NA NA 1 118 #> 5717 TCGA-55-6978-01 1 176 1 176 NA NA 1 42 #> 5718 TCGA-55-6978-11 1 176 1 176 NA NA 1 42 #> 5719 TCGA-55-6979-01 1 237 1 237 NA NA 1 195 #> 5720 TCGA-55-6979-11 1 237 1 237 NA NA 1 195 #> 5721 TCGA-55-6980-01 0 2109 0 2109 0 2109 0 2109 #> 5722 TCGA-55-6980-11 0 2109 0 2109 0 2109 0 2109 #> 5723 TCGA-55-6981-01 1 1379 0 1379 0 1379 0 1379 #> 5724 TCGA-55-6981-11 1 1379 0 1379 0 1379 0 1379 #> 5725 TCGA-55-6982-01 1 995 1 995 NA NA 1 183 #> 5726 TCGA-55-6982-11 1 995 1 995 NA NA 1 183 #> 5727 TCGA-55-6983-01 0 2823 0 2823 0 2823 0 2823 #> 5728 TCGA-55-6983-11 0 2823 0 2823 0 2823 0 2823 #> 5729 TCGA-55-6984-01 1 760 1 760 1 724 1 724 #> 5730 TCGA-55-6984-11 1 760 1 760 1 724 1 724 #> 5731 TCGA-55-6985-01 0 1233 0 1233 0 1233 0 1233 #> 5732 TCGA-55-6985-11 0 1233 0 1233 0 1233 0 1233 #> 5733 TCGA-55-6986-01 0 3261 0 3261 0 3261 0 3261 #> 5734 TCGA-55-6986-11 0 3261 0 3261 0 3261 0 3261 #> 5735 TCGA-55-6987-01 0 2137 0 2137 0 2137 0 2137 #> 5736 TCGA-55-7227-01 1 952 1 952 1 255 1 255 #> 5737 TCGA-55-7281-01 0 872 0 872 1 339 1 339 #> 5738 TCGA-55-7283-01 0 609 0 609 NA NA 0 609 #> 5739 TCGA-55-7284-01 1 243 1 243 1 231 1 231 #> 5740 TCGA-55-7570-01 0 824 0 824 0 824 0 824 #> 5741 TCGA-55-7573-01 0 487 0 487 0 487 0 487 #> 5742 TCGA-55-7574-01 1 995 1 995 1 478 1 478 #> 5743 TCGA-55-7576-01 0 670 0 670 0 670 0 670 #> 5744 TCGA-55-7724-01 0 705 0 705 0 705 0 705 #> 5745 TCGA-55-7725-01 0 442 0 442 0 442 0 442 #> 5746 TCGA-55-7726-01 0 652 0 652 0 652 0 652 #> 5747 TCGA-55-7727-01 0 119 0 119 0 119 0 119 #> 5748 TCGA-55-7728-01 0 704 0 704 0 704 0 704 #> 5749 TCGA-55-7815-01 0 773 0 773 1 466 1 466 #> 5750 TCGA-55-7816-01 1 468 1 468 NA NA 1 468 #> 5751 TCGA-55-7903-01 0 567 0 567 0 567 0 567 #> 5752 TCGA-55-7907-01 1 343 1 343 1 294 1 294 #> 5753 TCGA-55-7910-01 0 1040 0 1040 1 1018 1 1018 #> 5754 TCGA-55-7911-01 0 537 0 537 0 537 1 515 #> 5755 TCGA-55-7913-01 1 561 1 561 1 480 1 480 #> 5756 TCGA-55-7914-01 1 187 1 187 NA NA 1 187 #> 5757 TCGA-55-7994-01 0 603 0 603 0 603 0 603 #> 5758 TCGA-55-7995-01 0 889 0 889 1 468 1 468 #> 5759 TCGA-55-8085-01 0 904 0 904 0 904 0 904 #> 5760 TCGA-55-8087-01 0 462 0 462 0 462 0 462 #> 5761 TCGA-55-8089-01 1 702 0 702 0 702 0 702 #> 5762 TCGA-55-8090-01 1 598 1 598 1 548 1 548 #> 5763 TCGA-55-8091-01 0 600 0 600 0 600 0 600 #> 5764 TCGA-55-8092-01 1 154 1 154 1 127 1 127 #> 5765 TCGA-55-8094-01 0 541 0 541 NA NA 0 541 #> 5766 TCGA-55-8096-01 1 719 1 719 1 566 1 566 #> 5767 TCGA-55-8097-01 0 476 0 476 0 476 0 476 #> 5768 TCGA-55-8203-01 0 547 0 547 0 547 0 547 #> 5769 TCGA-55-8204-01 0 515 0 515 0 515 0 515 #> 5770 TCGA-55-8205-01 0 599 0 599 NA NA 1 495 #> 5771 TCGA-55-8206-01 0 888 0 888 0 888 0 888 #> 5772 TCGA-55-8207-01 0 977 0 977 0 977 0 977 #> 5773 TCGA-55-8208-01 0 674 0 674 1 511 1 511 #> 5774 TCGA-55-8299-01 1 469 1 469 1 274 1 274 #> 5775 TCGA-55-8301-01 0 534 0 534 1 238 1 238 #> 5776 TCGA-55-8302-01 0 478 0 478 0 478 0 478 #> 5777 TCGA-55-8505-01 0 440 0 440 0 440 0 440 #> 5778 TCGA-55-8506-01 0 11 0 11 NA NA 0 11 #> 5779 TCGA-55-8507-01 0 418 0 418 0 418 0 418 #> 5780 TCGA-55-8508-01 0 617 0 617 0 617 0 617 #> 5781 TCGA-55-8510-01 0 539 0 539 0 539 0 539 #> 5782 TCGA-55-8511-01 0 552 0 552 1 460 1 460 #> 5783 TCGA-55-8512-01 1 607 1 607 NA NA 1 607 #> 5784 TCGA-55-8513-01 0 791 0 791 1 317 1 317 #> 5785 TCGA-55-8514-01 0 520 0 520 0 520 0 520 #> 5786 TCGA-55-8614-01 0 536 0 536 0 536 0 536 #> 5787 TCGA-55-8615-01 0 446 0 446 1 224 1 224 #> 5788 TCGA-55-8616-01 0 48 0 48 NA NA 0 48 #> 5789 TCGA-55-8619-01 0 416 0 416 0 416 0 416 #> 5790 TCGA-55-8620-01 1 375 1 375 NA NA 1 375 #> 5791 TCGA-55-8621-01 0 515 0 515 0 515 0 515 #> 5792 TCGA-55-A48X-01 0 689 0 689 0 689 1 615 #> 5793 TCGA-55-A48Y-01 0 630 0 630 0 630 0 630 #> 5794 TCGA-55-A48Z-01 0 651 0 651 NA NA 1 536 #> 5795 TCGA-55-A490-01 1 99 0 99 NA NA 0 99 #> 5796 TCGA-55-A491-01 0 626 0 626 0 626 0 626 #> 5797 TCGA-55-A492-01 0 596 0 596 0 596 0 596 #> 5798 TCGA-55-A493-01 0 28 0 28 NA NA 0 28 #> 5799 TCGA-55-A494-01 0 481 0 481 0 481 0 481 #> 5800 TCGA-55-A4DF-01 1 614 1 614 1 515 1 515 #> 5801 TCGA-55-A4DG-01 0 608 0 608 0 608 0 608 #> 5802 TCGA-55-A57B-01 0 546 0 546 0 546 0 546 #> 5803 TCGA-62-8394-01 1 139 0 139 0 139 0 139 #> 5804 TCGA-62-8395-01 0 1216 0 1216 1 395 1 395 #> 5805 TCGA-62-8397-01 0 1289 0 1289 0 1289 0 1289 #> 5806 TCGA-62-8398-01 1 444 0 444 0 444 0 444 #> 5807 TCGA-62-8399-01 0 2696 0 2696 0 2696 0 2696 #> 5808 TCGA-62-8402-01 1 1498 1 1498 1 772 1 772 #> 5809 TCGA-62-A46O-01 1 1454 1 1454 1 943 1 943 #> 5810 TCGA-62-A46P-01 1 594 0 594 1 267 1 267 #> 5811 TCGA-62-A46R-01 1 1725 0 1725 0 1725 0 1725 #> 5812 TCGA-62-A46S-01 1 1653 1 1653 1 527 1 527 #> 5813 TCGA-62-A46U-01 0 2067 0 2067 0 2067 0 2067 #> 5814 TCGA-62-A46Y-01 1 414 1 414 1 314 1 314 #> 5815 TCGA-62-A470-01 1 1194 1 1194 1 539 1 539 #> 5816 TCGA-62-A471-01 0 1246 0 1246 0 1246 0 1246 #> 5817 TCGA-62-A472-01 0 910 0 910 1 290 1 290 #> 5818 TCGA-64-1676-01 0 1728 0 1728 0 1728 0 1728 #> 5819 TCGA-64-1677-01 1 628 NA 628 NA NA 1 360 #> 5820 TCGA-64-1678-01 0 1189 0 1189 0 1189 0 1189 #> 5821 TCGA-64-1679-01 0 2488 0 2488 0 2488 0 2488 #> 5822 TCGA-64-1680-01 0 1126 0 1126 NA NA 0 1126 #> 5823 TCGA-64-1681-01 1 1167 NA 1167 NA NA 1 439 #> 5824 TCGA-64-5774-01 0 2676 0 2676 1 246 1 246 #> 5825 TCGA-64-5775-01 1 62 1 62 NA NA 1 62 #> 5826 TCGA-64-5778-01 0 1305 0 1305 1 962 1 962 #> 5827 TCGA-64-5779-01 0 864 0 864 NA NA 1 795 #> 5828 TCGA-64-5781-01 0 1559 0 1559 NA NA 1 96 #> 5829 TCGA-64-5815-01 0 866 0 866 0 866 0 866 #> 5830 TCGA-67-3770-01 0 610 0 610 NA NA 0 610 #> 5831 TCGA-67-3771-01 0 610 0 610 NA NA 0 610 #> 5832 TCGA-67-3772-01 0 573 0 573 NA NA 0 573 #> 5833 TCGA-67-3773-01 0 427 0 427 NA NA 0 427 #> 5834 TCGA-67-3774-01 0 385 0 385 NA NA 0 385 #> 5835 TCGA-67-4679-01 0 448 0 448 NA NA 0 448 #> 5836 TCGA-67-6215-01 0 174 0 174 0 174 0 174 #> 5837 TCGA-67-6216-01 0 141 0 141 0 141 0 141 #> 5838 TCGA-67-6217-01 0 422 0 422 NA NA 1 296 #> 5839 TCGA-69-7760-01 0 202 0 202 NA NA 0 202 #> 5840 TCGA-69-7761-01 0 186 0 186 NA NA 0 186 #> 5841 TCGA-69-7763-01 0 690 0 690 NA NA 0 690 #> 5842 TCGA-69-7764-01 0 414 0 414 NA NA 0 414 #> 5843 TCGA-69-7765-01 0 165 0 165 NA NA 0 165 #> 5844 TCGA-69-7973-01 0 230 0 230 0 230 0 230 #> 5845 TCGA-69-7974-01 0 184 0 184 NA NA 0 184 #> 5846 TCGA-69-7978-01 0 134 0 134 NA NA 0 134 #> 5847 TCGA-69-7979-01 0 408 0 408 NA NA 0 408 #> 5848 TCGA-69-7980-01 0 411 0 411 0 411 0 411 #> 5849 TCGA-69-8253-01 0 426 0 426 0 426 0 426 #> 5850 TCGA-69-8254-01 0 409 0 409 0 409 0 409 #> 5851 TCGA-69-8255-01 0 129 0 129 NA NA 0 129 #> 5852 TCGA-69-8453-01 0 813 0 813 NA NA 1 344 #> 5853 TCGA-69-A59K-01 0 591 0 591 NA NA 0 591 #> 5854 TCGA-71-6725-01 0 256 0 256 NA NA 1 164 #> 5855 TCGA-71-8520-01 1 210 1 210 1 179 1 179 #> 5856 TCGA-73-4658-01 1 1600 0 1600 0 1600 0 1600 #> 5857 TCGA-73-4659-01 1 711 1 711 NA NA 1 35 #> 5858 TCGA-73-4662-01 0 2515 0 2515 1 21 1 21 #> 5859 TCGA-73-4666-01 0 800 0 800 NA NA 0 800 #> 5860 TCGA-73-4668-01 0 467 0 467 1 236 1 236 #> 5861 TCGA-73-4670-01 0 131 0 131 NA NA 0 131 #> 5862 TCGA-73-4675-01 1 922 0 922 NA NA 1 361 #> 5863 TCGA-73-4676-01 1 281 1 281 NA NA 1 281 #> 5864 TCGA-73-4676-11 1 281 1 281 NA NA 1 281 #> 5865 TCGA-73-4677-01 1 38 1 38 NA NA 1 38 #> 5866 TCGA-73-7498-01 0 1189 0 1189 0 1189 0 1189 #> 5867 TCGA-73-7499-01 1 1531 0 1531 1 1447 1 1447 #> 5868 TCGA-73-A9RS-01 1 340 1 340 NA NA 1 107 #> 5869 TCGA-75-5122-01 1 NA 1 NA NA NA 1 NA #> 5870 TCGA-75-5125-01 1 2027 1 2027 1 1752 1 1752 #> 5871 TCGA-75-5126-01 0 NA 0 NA NA NA 0 NA #> 5872 TCGA-75-5146-01 0 2368 0 2368 0 2368 1 1773 #> 5873 TCGA-75-5147-01 0 1333 0 1333 0 1333 0 1333 #> 5874 TCGA-75-6203-01 0 NA 0 NA 0 NA 0 NA #> 5875 TCGA-75-6205-01 1 NA 1 NA NA NA 1 NA #> 5876 TCGA-75-6206-01 0 2590 0 2590 0 2590 0 2590 #> 5877 TCGA-75-6207-01 1 NA NA NA 0 NA 0 NA #> 5878 TCGA-75-6211-01 1 NA 1 NA NA NA 1 NA #> 5879 TCGA-75-6212-01 1 1516 1 1516 0 1516 1 1340 #> 5880 TCGA-75-6214-01 1 1115 1 1115 1 419 1 419 #> 5881 TCGA-75-7025-01 0 3305 0 3305 1 1481 1 1481 #> 5882 TCGA-75-7027-01 0 3059 0 3059 1 2949 1 2949 #> 5883 TCGA-75-7030-01 0 NA 0 NA 0 NA 0 NA #> 5884 TCGA-75-7031-01 0 NA 0 NA NA NA 0 NA #> 5885 TCGA-78-7143-01 1 4961 NA 4961 NA NA 1 1500 #> 5886 TCGA-78-7145-01 1 826 1 826 NA NA 1 422 #> 5887 TCGA-78-7146-01 1 173 NA 173 NA NA 0 173 #> 5888 TCGA-78-7147-01 1 586 1 586 NA NA 1 578 #> 5889 TCGA-78-7148-01 1 626 NA 626 NA NA 1 182 #> 5890 TCGA-78-7149-01 0 3940 0 3940 0 3940 0 3940 #> 5891 TCGA-78-7150-01 1 666 1 666 NA NA 1 139 #> 5892 TCGA-78-7152-01 1 1215 1 1215 1 1202 1 1202 #> 5893 TCGA-78-7153-01 0 3635 0 3635 0 3635 0 3635 #> 5894 TCGA-78-7154-01 1 593 NA 593 NA NA 0 593 #> 5895 TCGA-78-7155-01 1 1171 NA 1171 NA NA 1 209 #> 5896 TCGA-78-7156-01 1 976 NA 976 NA NA 0 976 #> 5897 TCGA-78-7158-01 1 179 1 179 NA NA 1 132 #> 5898 TCGA-78-7159-01 0 1974 0 1974 0 1974 0 1974 #> 5899 TCGA-78-7160-01 1 697 NA 697 NA NA 0 697 #> 5900 TCGA-78-7161-01 1 291 1 291 NA NA 1 162 #> 5901 TCGA-78-7162-01 1 3169 NA 3169 NA NA 1 2218 #> 5902 TCGA-78-7163-01 0 7248 0 7248 0 7248 0 7248 #> 5903 TCGA-78-7166-01 1 258 NA 258 NA NA 0 258 #> 5904 TCGA-78-7167-01 1 2681 1 2681 NA NA 1 726 #> 5905 TCGA-78-7220-01 1 807 1 807 NA NA 1 531 #> 5906 TCGA-78-7535-01 1 949 1 949 NA NA 1 809 #> 5907 TCGA-78-7536-01 1 244 1 244 NA NA 1 231 #> 5908 TCGA-78-7537-01 1 1622 NA 1622 NA NA 0 1622 #> 5909 TCGA-78-7539-01 0 791 0 791 1 688 1 688 #> 5910 TCGA-78-7540-01 1 1197 NA 1197 0 1197 0 1197 #> 5911 TCGA-78-7542-01 1 321 NA 321 NA NA 0 321 #> 5912 TCGA-78-7633-01 1 1528 1 1528 1 1450 1 1450 #> 5913 TCGA-78-8640-01 0 7062 0 7062 0 7062 0 7062 #> 5914 TCGA-78-8648-01 1 1209 NA 1209 NA NA 1 720 #> 5915 TCGA-78-8655-01 0 2360 0 2360 0 2360 0 2360 #> 5916 TCGA-78-8660-01 1 321 1 321 NA NA 1 242 #> 5917 TCGA-78-8662-01 1 3361 NA 3361 1 3044 1 3044 #> 5918 TCGA-80-5607-01 0 NA 0 NA NA NA 0 NA #> 5919 TCGA-80-5608-01 0 2832 0 2832 0 2832 0 2832 #> 5920 TCGA-80-5611-01 0 2595 0 2595 0 2595 0 2595 #> 5921 TCGA-83-5908-01 0 824 0 824 NA NA 0 824 #> 5922 TCGA-86-6562-01 1 376 1 376 NA NA 1 274 #> 5923 TCGA-86-6851-01 0 179 0 179 0 179 0 179 #> 5924 TCGA-86-7701-01 0 947 0 947 NA NA 1 424 #> 5925 TCGA-86-7711-01 1 1046 1 1046 NA NA 1 1046 #> 5926 TCGA-86-7713-01 0 1157 0 1157 0 1157 0 1157 #> 5927 TCGA-86-7714-01 1 625 1 625 NA NA 1 625 #> 5928 TCGA-86-7953-01 0 997 0 997 0 997 0 997 #> 5929 TCGA-86-7954-01 0 605 0 605 0 605 0 605 #> 5930 TCGA-86-7955-01 0 1072 0 1072 1 820 1 820 #> 5931 TCGA-86-8054-01 0 1148 0 1148 0 1148 0 1148 #> 5932 TCGA-86-8055-01 1 124 0 124 0 124 0 124 #> 5933 TCGA-86-8073-01 0 740 0 740 0 740 0 740 #> 5934 TCGA-86-8074-01 0 24 0 24 NA NA 0 24 #> 5935 TCGA-86-8075-01 1 694 0 694 1 199 1 199 #> 5936 TCGA-86-8076-01 0 993 0 993 0 993 0 993 #> 5937 TCGA-86-8278-01 0 944 0 944 1 29 1 29 #> 5938 TCGA-86-8279-01 0 949 0 949 0 949 0 949 #> 5939 TCGA-86-8280-01 0 701 0 701 0 701 0 701 #> 5940 TCGA-86-8281-01 0 0 0 0 0 0 0 0 #> 5941 TCGA-86-8358-01 0 653 0 653 0 653 0 653 #> 5942 TCGA-86-8359-01 1 444 0 444 NA NA 0 444 #> 5943 TCGA-86-8585-01 0 353 0 353 0 353 0 353 #> 5944 TCGA-86-8668-01 0 423 0 423 0 423 0 423 #> 5945 TCGA-86-8669-01 0 938 0 938 1 849 1 849 #> 5946 TCGA-86-8671-01 0 839 0 839 0 839 0 839 #> 5947 TCGA-86-8672-01 1 19 0 19 0 19 0 19 #> 5948 TCGA-86-8673-01 0 862 0 862 1 636 1 636 #> 5949 TCGA-86-8674-01 0 806 0 806 1 334 1 334 #> 5950 TCGA-86-A456-01 0 896 0 896 0 896 0 896 #> 5951 TCGA-86-A4D0-01 1 116 0 116 0 116 0 116 #> 5952 TCGA-86-A4JF-01 1 737 1 737 1 436 1 436 #> 5953 TCGA-86-A4P7-01 0 415 0 415 0 415 0 415 #> 5954 TCGA-86-A4P8-01 0 805 0 805 0 805 0 805 #> 5955 TCGA-91-6828-01 0 323 0 323 0 323 0 323 #> 5956 TCGA-91-6828-11 0 323 0 323 0 323 0 323 #> 5957 TCGA-91-6829-01 1 1258 0 1258 NA NA 0 1258 #> 5958 TCGA-91-6829-11 1 1258 0 1258 NA NA 0 1258 #> 5959 TCGA-91-6830-01 0 60 0 60 NA NA 1 18 #> 5960 TCGA-91-6831-01 0 310 0 310 0 310 0 310 #> 5961 TCGA-91-6831-11 0 310 0 310 0 310 0 310 #> 5962 TCGA-91-6835-01 0 79 0 79 0 79 0 79 #> 5963 TCGA-91-6835-11 0 79 0 79 0 79 0 79 #> 5964 TCGA-91-6836-01 0 417 0 417 0 417 0 417 #> 5965 TCGA-91-6836-11 0 417 0 417 0 417 0 417 #> 5966 TCGA-91-6840-01 0 372 0 372 0 372 0 372 #> 5967 TCGA-91-6847-01 0 842 0 842 NA NA 1 772 #> 5968 TCGA-91-6847-11 0 842 0 842 NA NA 1 772 #> 5969 TCGA-91-6848-01 0 224 0 224 0 224 0 224 #> 5970 TCGA-91-6849-01 0 35 0 35 NA NA 0 35 #> 5971 TCGA-91-6849-11 0 35 0 35 NA NA 0 35 #> 5972 TCGA-91-7771-01 0 492 0 492 0 492 0 492 #> 5973 TCGA-91-8496-01 0 505 0 505 0 505 0 505 #> 5974 TCGA-91-8497-01 1 434 0 434 0 434 0 434 #> 5975 TCGA-91-8499-01 0 36 0 36 NA NA 0 36 #> 5976 TCGA-91-A4BC-01 0 44 0 44 NA NA 0 44 #> 5977 TCGA-91-A4BD-01 0 603 0 603 0 603 0 603 #> 5978 TCGA-93-7347-01 0 683 0 683 0 683 0 683 #> 5979 TCGA-93-7348-01 0 531 0 531 0 531 0 531 #> 5980 TCGA-93-8067-01 0 186 0 186 0 186 0 186 #> 5981 TCGA-93-A4JN-01 0 718 0 718 NA NA 0 718 #> 5982 TCGA-93-A4JO-01 1 33 0 33 NA NA 0 33 #> 5983 TCGA-93-A4JP-01 0 578 0 578 NA NA 1 497 #> 5984 TCGA-93-A4JQ-01 0 526 0 526 0 526 0 526 #> 5985 TCGA-95-7039-01 0 1272 0 1272 1 1258 1 1258 #> 5986 TCGA-95-7043-01 1 503 1 503 NA NA 1 503 #> 5987 TCGA-95-7562-01 1 87 0 87 NA NA 0 87 #> 5988 TCGA-95-7567-01 0 568 0 568 NA NA 0 568 #> 5989 TCGA-95-7944-01 0 377 0 377 NA NA 0 377 #> 5990 TCGA-95-7947-01 0 477 0 477 0 477 0 477 #> 5991 TCGA-95-7948-01 0 476 0 476 0 476 0 476 #> 5992 TCGA-95-8039-01 0 830 0 830 1 228 1 228 #> 5993 TCGA-95-8494-01 0 84 0 84 0 84 0 84 #> 5994 TCGA-95-A4VK-01 0 651 0 651 NA NA 1 496 #> 5995 TCGA-95-A4VN-01 0 553 0 553 NA NA 0 553 #> 5996 TCGA-95-A4VP-01 0 605 0 605 NA NA 1 216 #> 5997 TCGA-97-7546-01 0 1285 0 1285 NA NA 1 1255 #> 5998 TCGA-97-7547-01 0 1965 0 1965 NA NA 1 775 #> 5999 TCGA-97-7552-01 0 1932 0 1932 NA NA 1 798 #> 6000 TCGA-97-7553-01 0 1870 0 1870 0 1870 0 1870 #> 6001 TCGA-97-7554-01 0 775 0 775 0 775 0 775 #> 6002 TCGA-97-7937-01 0 564 0 564 NA NA 0 564 #> 6003 TCGA-97-7938-01 1 18 0 18 0 18 0 18 #> 6004 TCGA-97-7941-01 0 484 0 484 0 484 0 484 #> 6005 TCGA-97-8171-01 0 568 0 568 NA NA 1 441 #> 6006 TCGA-97-8172-01 0 545 0 545 0 545 0 545 #> 6007 TCGA-97-8174-01 1 164 NA 164 NA NA 0 164 #> 6008 TCGA-97-8175-01 0 551 0 551 1 294 1 294 #> 6009 TCGA-97-8176-01 1 468 0 468 NA NA 1 39 #> 6010 TCGA-97-8177-01 0 499 0 499 NA NA 0 499 #> 6011 TCGA-97-8179-01 0 435 0 435 0 435 0 435 #> 6012 TCGA-97-8547-01 0 657 0 657 0 657 0 657 #> 6013 TCGA-97-8552-01 0 626 0 626 0 626 0 626 #> 6014 TCGA-97-A4LX-01 0 614 0 614 0 614 0 614 #> 6015 TCGA-97-A4M0-01 0 652 0 652 0 652 0 652 #> 6016 TCGA-97-A4M1-01 0 601 0 601 0 601 0 601 #> 6017 TCGA-97-A4M2-01 0 624 0 624 0 624 0 624 #> 6018 TCGA-97-A4M3-01 0 540 0 540 0 540 1 54 #> 6019 TCGA-97-A4M5-01 0 634 0 634 0 634 0 634 #> 6020 TCGA-97-A4M6-01 0 568 0 568 0 568 0 568 #> 6021 TCGA-97-A4M7-01 0 629 0 629 0 629 0 629 #> 6022 TCGA-99-7458-01 0 747 0 747 NA NA 0 747 #> 6023 TCGA-99-8025-01 0 1060 0 1060 0 1060 0 1060 #> 6024 TCGA-99-8028-01 0 1118 0 1118 0 1118 0 1118 #> 6025 TCGA-99-8032-01 0 44 0 44 0 44 0 44 #> 6026 TCGA-99-8033-01 1 656 1 656 NA NA 1 656 #> 6027 TCGA-99-AA5R-01 0 658 0 658 0 658 0 658 #> 6028 TCGA-J2-8192-01 0 739 0 739 NA NA 1 482 #> 6029 TCGA-J2-8194-01 0 724 0 724 NA NA 1 470 #> 6030 TCGA-J2-A4AD-01 1 550 1 550 NA NA 1 524 #> 6031 TCGA-J2-A4AE-01 0 1079 0 1079 0 1079 0 1079 #> 6032 TCGA-J2-A4AG-01 0 988 0 988 0 988 0 988 #> 6033 TCGA-L4-A4E5-01 0 578 0 578 0 578 0 578 #> 6034 TCGA-L4-A4E6-01 0 435 0 435 0 435 0 435 #> 6035 TCGA-L9-A443-01 1 193 0 193 0 193 0 193 #> 6036 TCGA-L9-A444-01 0 307 0 307 0 307 0 307 #> 6037 TCGA-L9-A50W-01 1 442 1 442 1 389 1 389 #> 6038 TCGA-L9-A5IP-01 1 58 1 58 NA NA 1 49 #> 6039 TCGA-L9-A743-01 0 664 0 664 0 664 0 664 #> 6040 TCGA-L9-A7SV-01 0 565 0 565 0 565 0 565 #> 6041 TCGA-L9-A8F4-01 0 476 0 476 NA NA 0 476 #> 6042 TCGA-MN-A4N1-01 0 827 0 827 0 827 0 827 #> 6043 TCGA-MN-A4N4-01 0 1175 0 1175 0 1175 0 1175 #> 6044 TCGA-MN-A4N5-01 0 84 0 84 0 84 0 84 #> 6045 TCGA-MP-A4SV-01 1 2620 NA 2620 0 2620 0 2620 #> 6046 TCGA-MP-A4SW-01 1 1778 NA 1778 0 1778 0 1778 #> 6047 TCGA-MP-A4SY-01 1 1501 0 1501 1 489 1 489 #> 6048 TCGA-MP-A4T4-01 1 2617 NA 2617 0 2617 0 2617 #> 6049 TCGA-MP-A4T6-01 1 1790 0 1790 0 1790 0 1790 #> 6050 TCGA-MP-A4T7-01 1 167 NA 167 NA NA 0 167 #> 6051 TCGA-MP-A4T8-01 1 161 NA 161 NA NA 0 161 #> 6052 TCGA-MP-A4T9-01 1 1265 1 1265 1 341 1 341 #> 6053 TCGA-MP-A4TA-01 1 950 1 950 1 725 1 725 #> 6054 TCGA-MP-A4TC-01 1 74 0 74 0 74 0 74 #> 6055 TCGA-MP-A4TD-01 1 307 NA 307 1 226 1 226 #> 6056 TCGA-MP-A4TE-01 1 896 1 896 1 226 1 226 #> 6057 TCGA-MP-A4TF-01 1 336 1 336 NA NA 1 195 #> 6058 TCGA-MP-A4TH-01 0 741 0 741 0 741 0 741 #> 6059 TCGA-MP-A4TI-01 1 429 1 429 NA NA 1 84 #> 6060 TCGA-MP-A4TJ-01 1 339 NA 339 0 339 0 339 #> 6061 TCGA-MP-A4TK-01 1 582 1 582 1 397 1 397 #> 6062 TCGA-MP-A5C7-01 0 2248 0 2248 0 2248 0 2248 #> 6063 TCGA-NJ-A4YF-01 0 2161 0 2161 NA NA 0 2161 #> 6064 TCGA-NJ-A4YG-01 0 2261 0 2261 NA NA 0 2261 #> 6065 TCGA-NJ-A4YI-01 1 4 NA 4 NA NA 0 4 #> 6066 TCGA-NJ-A4YP-01 0 50 0 50 NA NA 0 50 #> 6067 TCGA-NJ-A4YQ-01 0 1432 0 1432 NA NA 0 1432 #> 6068 TCGA-NJ-A55A-01 0 15 0 15 NA NA 0 15 #> 6069 TCGA-NJ-A55O-01 0 13 0 13 NA NA 0 13 #> 6070 TCGA-NJ-A55R-01 0 603 0 603 NA NA 0 603 #> 6071 TCGA-NJ-A7XG-01 0 617 0 617 NA NA 0 617 #> 6072 TCGA-O1-A52J-01 1 1798 1 1798 NA NA 1 898 #> 6073 TCGA-S2-AA1A-01 0 513 0 513 0 513 0 513 #> 6074 TCGA-18-3407-01 1 136 0 136 NA NA 0 136 #> 6075 TCGA-18-3408-01 1 2304 1 2304 NA NA 1 1793 #> 6076 TCGA-18-3409-01 0 3747 0 3747 0 3747 1 2291 #> 6077 TCGA-18-3410-01 1 146 0 146 NA NA 0 146 #> 6078 TCGA-18-3411-01 0 3576 0 3576 NA NA 0 3576 #> 6079 TCGA-18-3412-01 1 345 1 345 NA NA 1 273 #> 6080 TCGA-18-3414-01 1 716 0 716 NA NA 0 716 #> 6081 TCGA-18-3415-01 1 2803 0 2803 0 2803 0 2803 #> 6082 TCGA-18-3416-01 1 973 1 973 1 940 1 940 #> 6083 TCGA-18-3417-01 1 1097 0 1097 NA NA 0 1097 #> 6084 TCGA-18-3419-01 0 2811 0 2811 0 2811 0 2811 #> 6085 TCGA-18-3421-01 0 2645 0 2645 0 2645 0 2645 #> 6086 TCGA-18-4083-01 1 188 0 188 NA NA 0 188 #> 6087 TCGA-18-4086-01 1 85 0 85 NA NA 0 85 #> 6088 TCGA-18-4721-01 0 4694 0 4694 0 4694 0 4694 #> 6089 TCGA-18-5592-01 0 1519 0 1519 NA NA 0 1519 #> 6090 TCGA-18-5595-01 1 827 NA 827 NA NA 0 827 #> 6091 TCGA-21-1070-01 0 3636 0 3636 NA NA 0 3636 #> 6092 TCGA-21-1071-01 1 1426 1 1426 NA NA 1 993 #> 6093 TCGA-21-1072-01 0 3016 0 3016 NA NA 0 3016 #> 6094 TCGA-21-1075-01 0 2134 0 2134 NA NA 0 2134 #> 6095 TCGA-21-1076-01 0 1852 0 1852 NA NA 1 1575 #> 6096 TCGA-21-1077-01 1 1058 1 1058 NA NA 1 644 #> 6097 TCGA-21-1078-01 1 474 1 474 NA NA 1 257 #> 6098 TCGA-21-1079-01 1 965 1 965 NA NA 1 317 #> 6099 TCGA-21-1080-01 0 3724 0 3724 NA NA 0 3724 #> 6100 TCGA-21-1081-01 1 284 1 284 NA NA 1 284 #> 6101 TCGA-21-1082-01 0 3644 0 3644 NA NA 0 3644 #> 6102 TCGA-21-1083-01 1 1315 0 1315 NA NA 0 1315 #> 6103 TCGA-21-5782-01 1 962 NA 962 0 962 0 962 #> 6104 TCGA-21-5783-01 1 2680 NA 2680 NA NA 0 2680 #> 6105 TCGA-21-5784-01 0 1268 0 1268 0 1268 0 1268 #> 6106 TCGA-21-5786-01 0 1032 0 1032 1 817 1 817 #> 6107 TCGA-21-5787-01 1 329 1 329 NA NA 1 103 #> 6108 TCGA-21-A5DI-01 0 979 0 979 0 979 0 979 #> 6109 TCGA-22-0940-01 1 669 1 669 NA NA 1 669 #> 6110 TCGA-22-0944-01 1 223 0 223 NA NA 0 223 #> 6111 TCGA-22-1000-01 1 454 1 454 1 263 1 263 #> 6112 TCGA-22-1002-01 1 131 0 131 NA NA 0 131 #> 6113 TCGA-22-1005-01 1 1953 0 1953 0 1953 0 1953 #> 6114 TCGA-22-1011-01 1 53 0 53 NA NA 0 53 #> 6115 TCGA-22-1012-01 1 429 0 429 0 429 0 429 #> 6116 TCGA-22-1016-01 1 822 0 822 0 822 0 822 #> 6117 TCGA-22-1017-01 1 1485 1 1485 1 904 1 904 #> 6118 TCGA-22-4591-01 1 623 1 623 NA NA 1 443 #> 6119 TCGA-22-4593-01 1 1067 0 1067 NA NA 0 1067 #> 6120 TCGA-22-4593-11 1 1067 0 1067 NA NA 0 1067 #> 6121 TCGA-22-4594-01 1 1470 NA 1470 NA NA 0 1470 #> 6122 TCGA-22-4595-01 1 734 1 734 1 250 1 250 #> 6123 TCGA-22-4596-01 1 17 0 17 NA NA 0 17 #> 6124 TCGA-22-4599-01 1 1161 NA 1161 NA NA 0 1161 #> 6125 TCGA-22-4601-01 1 1057 1 1057 NA NA 1 525 #> 6126 TCGA-22-4604-01 1 399 1 399 NA NA 1 306 #> 6127 TCGA-22-4605-01 1 974 0 974 0 974 0 974 #> 6128 TCGA-22-4607-01 1 587 0 587 NA NA 0 587 #> 6129 TCGA-22-4609-01 1 291 0 291 0 291 0 291 #> 6130 TCGA-22-4609-11 1 291 0 291 0 291 0 291 #> 6131 TCGA-22-4613-01 1 358 NA 358 NA NA 0 358 #> 6132 TCGA-22-5471-01 0 1845 0 1845 1 229 1 229 #> 6133 TCGA-22-5471-11 0 1845 0 1845 1 229 1 229 #> 6134 TCGA-22-5472-01 1 1975 0 1975 1 746 1 746 #> 6135 TCGA-22-5472-11 1 1975 0 1975 1 746 1 746 #> 6136 TCGA-22-5473-01 1 1933 0 1933 1 1655 1 1655 #> 6137 TCGA-22-5474-01 1 445 0 445 0 445 0 445 #> 6138 TCGA-22-5477-01 1 1346 NA 1346 1 511 1 511 #> 6139 TCGA-22-5478-01 1 24 0 24 0 24 0 24 #> 6140 TCGA-22-5478-11 1 24 0 24 0 24 0 24 #> 6141 TCGA-22-5479-01 1 2625 NA 2625 NA NA 0 2625 #> 6142 TCGA-22-5480-01 1 2170 1 2170 1 1779 1 1779 #> 6143 TCGA-22-5481-01 1 2409 NA 2409 1 346 1 346 #> 6144 TCGA-22-5481-11 1 2409 NA 2409 1 346 1 346 #> 6145 TCGA-22-5482-01 1 357 0 357 0 357 0 357 #> 6146 TCGA-22-5482-11 1 357 0 357 0 357 0 357 #> 6147 TCGA-22-5483-01 1 573 1 573 1 568 1 568 #> 6148 TCGA-22-5483-11 1 573 1 573 1 568 1 568 #> 6149 TCGA-22-5485-01 1 916 1 916 1 840 1 840 #> 6150 TCGA-22-5489-01 1 1912 1 1912 1 428 1 428 #> 6151 TCGA-22-5489-11 1 1912 1 1912 1 428 1 428 #> 6152 TCGA-22-5491-01 1 1713 NA 1713 NA NA 0 1713 #> 6153 TCGA-22-5491-11 1 1713 NA 1713 NA NA 0 1713 #> 6154 TCGA-22-5492-01 1 506 NA 506 NA NA 0 506 #> 6155 TCGA-22-A5C4-01 0 671 0 671 0 671 0 671 #> 6156 TCGA-33-4532-01 1 3924 0 3924 0 3924 0 3924 #> 6157 TCGA-33-4533-01 0 4068 0 4068 0 4068 0 4068 #> 6158 TCGA-33-4538-01 1 2979 NA 2979 0 2979 0 2979 #> 6159 TCGA-33-4547-01 0 2419 0 2419 0 2419 0 2419 #> 6160 TCGA-33-4566-01 1 5287 NA 5287 NA NA 0 5287 #> 6161 TCGA-33-4582-01 1 3149 1 3149 1 2923 1 2923 #> 6162 TCGA-33-4583-01 1 4601 0 4601 0 4601 0 4601 #> 6163 TCGA-33-4586-01 1 428 NA 428 1 169 1 169 #> 6164 TCGA-33-4587-01 1 1656 1 1656 NA NA 1 1656 #> 6165 TCGA-33-4587-11 1 1656 1 1656 NA NA 1 1656 #> 6166 TCGA-33-4589-01 1 47 0 47 0 47 0 47 #> 6167 TCGA-33-6737-01 1 601 1 601 NA NA 1 601 #> 6168 TCGA-33-6737-11 1 601 1 601 NA NA 1 601 #> 6169 TCGA-33-6738-01 0 1927 0 1927 0 1927 0 1927 #> 6170 TCGA-33-A4WN-01 1 143 0 143 0 143 0 143 #> 6171 TCGA-33-A5GW-01 1 9 0 9 0 9 0 9 #> 6172 TCGA-33-AAS8-01 1 1114 0 1114 0 1114 0 1114 #> 6173 TCGA-33-AASB-01 1 211 1 211 NA NA 1 30 #> 6174 TCGA-33-AASD-01 1 3376 1 3376 NA NA 1 1912 #> 6175 TCGA-33-AASI-01 1 1344 1 1344 NA NA 1 1344 #> 6176 TCGA-33-AASJ-01 1 3600 1 3600 1 1135 1 1135 #> 6177 TCGA-33-AASL-01 1 826 1 826 NA NA 1 149 #> 6178 TCGA-34-2596-01 1 80 0 80 0 80 0 80 #> 6179 TCGA-34-2600-01 1 1874 0 1874 0 1874 0 1874 #> 6180 TCGA-34-2608-01 1 1000 0 1000 0 1000 0 1000 #> 6181 TCGA-34-5231-01 1 1984 0 1984 NA NA 0 1984 #> 6182 TCGA-34-5232-01 0 2471 0 2471 0 2471 0 2471 #> 6183 TCGA-34-5234-01 0 2271 0 2271 0 2271 0 2271 #> 6184 TCGA-34-5236-01 1 276 1 276 NA NA 1 113 #> 6185 TCGA-34-5239-01 0 1834 0 1834 1 1530 1 1530 #> 6186 TCGA-34-5240-01 0 1541 0 1541 0 1541 0 1541 #> 6187 TCGA-34-5241-01 1 515 0 515 NA NA 0 515 #> 6188 TCGA-34-5927-01 0 1361 0 1361 NA NA 1 245 #> 6189 TCGA-34-5928-01 0 1196 0 1196 0 1196 0 1196 #> 6190 TCGA-34-5929-01 1 151 0 151 NA NA 0 151 #> 6191 TCGA-34-7107-01 1 34 NA 34 NA NA 0 34 #> 6192 TCGA-34-7107-11 1 34 NA 34 NA NA 0 34 #> 6193 TCGA-34-8454-01 0 1180 0 1180 0 1180 0 1180 #> 6194 TCGA-34-8454-11 0 1180 0 1180 0 1180 0 1180 #> 6195 TCGA-34-8455-01 1 123 1 123 NA NA 1 123 #> 6196 TCGA-34-8456-01 0 804 0 804 0 804 0 804 #> 6197 TCGA-34-A5IX-01 0 1031 0 1031 0 1031 0 1031 #> 6198 TCGA-37-3783-01 0 122 0 122 NA NA 0 122 #> 6199 TCGA-37-3789-01 0 13 0 13 NA NA 0 13 #> 6200 TCGA-37-3792-01 0 12 0 12 NA NA 0 12 #> 6201 TCGA-37-4129-01 0 242 0 242 0 242 0 242 #> 6202 TCGA-37-4130-01 0 247 0 247 NA NA 0 247 #> 6203 TCGA-37-4132-01 0 227 0 227 NA NA 0 227 #> 6204 TCGA-37-4133-01 0 238 0 238 NA NA 0 238 #> 6205 TCGA-37-4135-01 0 207 0 207 NA NA 0 207 #> 6206 TCGA-37-4141-01 0 12 0 12 NA NA 0 12 #> 6207 TCGA-37-5819-01 0 103 0 103 NA NA 0 103 #> 6208 TCGA-37-A5EL-01 1 1143 1 1143 NA NA 1 946 #> 6209 TCGA-37-A5EM-01 0 867 0 867 0 867 0 867 #> 6210 TCGA-37-A5EN-01 0 660 0 660 0 660 0 660 #> 6211 TCGA-39-5011-01 0 4053 0 4053 1 565 1 565 #> 6212 TCGA-39-5019-01 0 3387 0 3387 1 378 1 378 #> 6213 TCGA-39-5021-01 1 2086 1 2086 1 1875 1 1875 #> 6214 TCGA-39-5022-01 1 1679 0 1679 NA NA 1 1448 #> 6215 TCGA-39-5024-01 0 2510 0 2510 0 2510 0 2510 #> 6216 TCGA-39-5027-01 0 3108 0 3108 0 3108 1 3081 #> 6217 TCGA-39-5028-01 1 52 NA 52 NA NA 0 52 #> 6218 TCGA-39-5029-01 1 740 1 740 NA NA 1 491 #> 6219 TCGA-39-5030-01 1 59 NA 59 0 59 0 59 #> 6220 TCGA-39-5031-01 1 1841 0 1841 0 1841 0 1841 #> 6221 TCGA-39-5034-01 1 1107 NA 1107 1 352 1 352 #> 6222 TCGA-39-5035-01 0 2080 0 2080 0 2080 0 2080 #> 6223 TCGA-39-5036-01 0 2165 0 2165 0 2165 0 2165 #> 6224 TCGA-39-5037-01 0 1690 0 1690 0 1690 0 1690 #> 6225 TCGA-39-5039-01 1 544 0 544 0 544 0 544 #> 6226 TCGA-39-5040-01 1 519 1 519 NA NA 1 442 #> 6227 TCGA-39-5040-11 1 519 1 519 NA NA 1 442 #> 6228 TCGA-43-2576-01 0 1223 0 1223 0 1223 0 1223 #> 6229 TCGA-43-2578-01 1 684 0 684 0 684 0 684 #> 6230 TCGA-43-2581-01 0 1176 0 1176 0 1176 0 1176 #> 6231 TCGA-43-3394-01 1 1190 1 1190 1 552 1 552 #> 6232 TCGA-43-3394-11 1 1190 1 1190 1 552 1 552 #> 6233 TCGA-43-3920-01 0 1007 0 1007 0 1007 0 1007 #> 6234 TCGA-43-5668-01 1 559 1 559 1 470 1 470 #> 6235 TCGA-43-5670-01 0 849 0 849 0 849 0 849 #> 6236 TCGA-43-5670-11 0 849 0 849 0 849 0 849 #> 6237 TCGA-43-6143-01 0 699 0 699 0 699 0 699 #> 6238 TCGA-43-6143-11 0 699 0 699 0 699 0 699 #> 6239 TCGA-43-6647-01 0 757 0 757 0 757 0 757 #> 6240 TCGA-43-6647-11 0 757 0 757 0 757 0 757 #> 6241 TCGA-43-6770-01 0 653 0 653 0 653 0 653 #> 6242 TCGA-43-6771-01 1 166 1 166 NA NA 1 154 #> 6243 TCGA-43-6771-11 1 166 1 166 NA NA 1 154 #> 6244 TCGA-43-6773-01 1 116 0 116 NA NA 0 116 #> 6245 TCGA-43-6773-11 1 116 0 116 NA NA 0 116 #> 6246 TCGA-43-7656-01 0 596 0 596 0 596 0 596 #> 6247 TCGA-43-7657-01 0 236 0 236 0 236 0 236 #> 6248 TCGA-43-7657-11 0 236 0 236 0 236 0 236 #> 6249 TCGA-43-7658-01 1 2378 1 2378 1 2305 1 2305 #> 6250 TCGA-43-7658-11 1 2378 1 2378 1 2305 1 2305 #> 6251 TCGA-43-8115-01 0 407 0 407 NA NA 0 407 #> 6252 TCGA-43-8116-01 0 358 0 358 0 358 0 358 #> 6253 TCGA-43-8118-01 1 89 NA 89 NA NA 0 89 #> 6254 TCGA-43-A474-01 0 353 0 353 0 353 0 353 #> 6255 TCGA-43-A475-01 0 296 0 296 0 296 0 296 #> 6256 TCGA-43-A56U-01 0 432 0 432 0 432 0 432 #> 6257 TCGA-43-A56V-01 0 366 0 366 1 355 1 355 #> 6258 TCGA-46-3765-01 0 405 0 405 0 405 0 405 #> 6259 TCGA-46-3766-01 0 370 0 370 0 370 0 370 #> 6260 TCGA-46-3767-01 0 396 0 396 0 396 0 396 #> 6261 TCGA-46-3768-01 1 299 0 299 0 299 0 299 #> 6262 TCGA-46-3769-01 0 135 0 135 0 135 0 135 #> 6263 TCGA-46-6025-01 0 324 0 324 0 324 0 324 #> 6264 TCGA-46-6026-01 0 423 0 423 0 423 0 423 #> 6265 TCGA-51-4079-01 1 12 NA 12 NA NA 0 12 #> 6266 TCGA-51-4079-11 1 12 NA 12 NA NA 0 12 #> 6267 TCGA-51-4080-01 1 12 0 12 NA NA 0 12 #> 6268 TCGA-51-4080-11 1 12 0 12 NA NA 0 12 #> 6269 TCGA-51-4081-01 0 911 0 911 NA NA 0 911 #> 6270 TCGA-51-4081-11 0 911 0 911 NA NA 0 911 #> 6271 TCGA-51-6867-01 1 1856 1 1856 1 788 1 788 #> 6272 TCGA-52-7622-01 0 862 0 862 0 862 0 862 #> 6273 TCGA-52-7809-01 1 166 1 166 NA NA 1 166 #> 6274 TCGA-52-7810-01 0 923 0 923 0 923 0 923 #> 6275 TCGA-52-7811-01 1 266 1 266 NA NA 1 153 #> 6276 TCGA-52-7812-01 1 835 1 835 NA NA 1 791 #> 6277 TCGA-56-1622-01 1 881 1 881 NA NA 1 881 #> 6278 TCGA-56-5897-01 0 378 0 378 0 378 0 378 #> 6279 TCGA-56-5898-01 0 555 0 555 0 555 0 555 #> 6280 TCGA-56-6545-01 0 666 0 666 0 666 0 666 #> 6281 TCGA-56-6546-01 0 NA 0 NA NA NA 0 NA #> 6282 TCGA-56-7221-01 0 608 0 608 0 608 0 608 #> 6283 TCGA-56-7222-01 1 562 1 562 1 427 1 427 #> 6284 TCGA-56-7222-11 1 562 1 562 1 427 1 427 #> 6285 TCGA-56-7223-01 1 442 1 442 NA NA 1 132 #> 6286 TCGA-56-7579-01 1 951 1 951 NA NA 1 149 #> 6287 TCGA-56-7580-01 0 925 0 925 0 925 0 925 #> 6288 TCGA-56-7580-11 0 925 0 925 0 925 0 925 #> 6289 TCGA-56-7582-01 0 601 0 601 0 601 0 601 #> 6290 TCGA-56-7582-11 0 601 0 601 0 601 0 601 #> 6291 TCGA-56-7730-01 1 198 1 198 NA NA 1 198 #> 6292 TCGA-56-7730-11 1 198 1 198 NA NA 1 198 #> 6293 TCGA-56-7731-01 1 3 0 3 NA NA 0 3 #> 6294 TCGA-56-7731-11 1 3 0 3 NA NA 0 3 #> 6295 TCGA-56-7822-01 1 532 1 532 NA NA 1 301 #> 6296 TCGA-56-7823-01 0 1011 0 1011 0 1011 0 1011 #> 6297 TCGA-56-7823-11 0 1011 0 1011 0 1011 0 1011 #> 6298 TCGA-56-8082-01 0 455 0 455 0 455 0 455 #> 6299 TCGA-56-8082-11 0 455 0 455 0 455 0 455 #> 6300 TCGA-56-8083-01 0 150 0 150 NA NA 0 150 #> 6301 TCGA-56-8083-11 0 150 0 150 NA NA 0 150 #> 6302 TCGA-56-8201-01 1 397 1 397 NA NA 1 397 #> 6303 TCGA-56-8201-11 1 397 1 397 NA NA 1 397 #> 6304 TCGA-56-8304-01 0 106 0 106 0 106 0 106 #> 6305 TCGA-56-8305-01 0 105 0 105 0 105 0 105 #> 6306 TCGA-56-8307-01 0 818 0 818 0 818 0 818 #> 6307 TCGA-56-8308-01 0 517 0 517 NA NA 0 517 #> 6308 TCGA-56-8309-01 0 428 0 428 0 428 0 428 #> 6309 TCGA-56-8309-11 0 428 0 428 0 428 0 428 #> 6310 TCGA-56-8503-01 0 41 0 41 NA NA 0 41 #> 6311 TCGA-56-8504-01 0 510 0 510 0 510 0 510 #> 6312 TCGA-56-8622-01 0 55 0 55 NA NA 0 55 #> 6313 TCGA-56-8623-01 1 692 0 692 0 692 1 645 #> 6314 TCGA-56-8623-11 1 692 0 692 0 692 1 645 #> 6315 TCGA-56-8624-01 0 420 0 420 0 420 0 420 #> 6316 TCGA-56-8625-01 1 315 1 315 NA NA 1 272 #> 6317 TCGA-56-8626-01 1 302 0 302 0 302 0 302 #> 6318 TCGA-56-8628-01 0 616 0 616 0 616 0 616 #> 6319 TCGA-56-8629-01 0 481 0 481 0 481 0 481 #> 6320 TCGA-56-A49D-01 0 637 0 637 0 637 0 637 #> 6321 TCGA-56-A4BW-01 0 585 0 585 0 585 0 585 #> 6322 TCGA-56-A4BX-01 0 405 0 405 0 405 0 405 #> 6323 TCGA-56-A4BY-01 1 543 1 543 NA NA 1 543 #> 6324 TCGA-56-A4ZJ-01 0 640 0 640 0 640 0 640 #> 6325 TCGA-56-A4ZK-01 0 570 0 570 0 570 0 570 #> 6326 TCGA-56-A5DR-01 0 4 0 4 0 4 0 4 #> 6327 TCGA-56-A5DS-01 0 8 0 8 0 8 0 8 #> 6328 TCGA-56-A62T-01 0 440 0 440 0 440 0 440 #> 6329 TCGA-58-8386-01 1 1 0 1 NA NA 0 1 #> 6330 TCGA-58-8386-11 1 1 0 1 NA NA 0 1 #> 6331 TCGA-58-8387-01 1 403 0 403 0 403 0 403 #> 6332 TCGA-58-8388-01 1 412 0 412 0 412 0 412 #> 6333 TCGA-58-8390-01 0 911 0 911 0 911 0 911 #> 6334 TCGA-58-8391-01 0 2167 0 2167 1 2033 1 2033 #> 6335 TCGA-58-8392-01 1 501 1 501 1 96 1 96 #> 6336 TCGA-58-8393-01 0 1058 0 1058 0 1058 0 1058 #> 6337 TCGA-58-A46J-01 0 2589 0 2589 0 2589 0 2589 #> 6338 TCGA-58-A46K-01 1 1045 1 1045 1 735 1 735 #> 6339 TCGA-58-A46L-01 0 1723 0 1723 0 1723 0 1723 #> 6340 TCGA-58-A46M-01 0 1072 0 1072 0 1072 0 1072 #> 6341 TCGA-58-A46N-01 0 910 0 910 1 630 1 630 #> 6342 TCGA-60-2695-01 0 642 0 642 0 642 0 642 #> 6343 TCGA-60-2696-01 1 109 NA 109 NA NA 0 109 #> 6344 TCGA-60-2697-01 1 372 1 372 1 200 1 200 #> 6345 TCGA-60-2698-01 1 311 1 311 NA NA 1 114 #> 6346 TCGA-60-2703-01 1 2945 NA 2945 1 1757 1 1757 #> 6347 TCGA-60-2704-01 1 1154 1 1154 NA NA 1 532 #> 6348 TCGA-60-2706-01 0 2820 0 2820 0 2820 0 2820 #> 6349 TCGA-60-2707-01 1 667 1 667 1 579 1 579 #> 6350 TCGA-60-2708-01 0 2447 0 2447 0 2447 0 2447 #> 6351 TCGA-60-2709-01 0 1505 0 1505 0 1505 0 1505 #> 6352 TCGA-60-2709-11 0 1505 0 1505 0 1505 0 1505 #> 6353 TCGA-60-2710-01 0 2024 0 2024 0 2024 0 2024 #> 6354 TCGA-60-2711-01 0 1260 0 1260 0 1260 0 1260 #> 6355 TCGA-60-2712-01 1 274 NA 274 0 274 0 274 #> 6356 TCGA-60-2713-01 0 1731 0 1731 1 1356 1 1356 #> 6357 TCGA-60-2714-01 0 1531 0 1531 0 1531 0 1531 #> 6358 TCGA-60-2715-01 1 1075 1 1075 NA NA 1 1075 #> 6359 TCGA-60-2716-01 0 1475 0 1475 0 1475 0 1475 #> 6360 TCGA-60-2719-01 0 1297 0 1297 0 1297 0 1297 #> 6361 TCGA-60-2720-01 0 97 0 97 NA NA 0 97 #> 6362 TCGA-60-2721-01 0 983 0 983 0 983 0 983 #> 6363 TCGA-60-2722-01 0 908 0 908 1 851 1 851 #> 6364 TCGA-60-2723-01 0 1092 0 1092 0 1092 0 1092 #> 6365 TCGA-60-2724-01 0 717 0 717 NA NA 0 717 #> 6366 TCGA-60-2725-01 0 816 0 816 0 816 0 816 #> 6367 TCGA-60-2726-01 1 358 0 358 0 358 0 358 #> 6368 TCGA-63-5128-01 1 NA 1 NA NA NA 1 NA #> 6369 TCGA-63-5131-01 1 NA 0 NA 0 NA 0 NA #> 6370 TCGA-63-6202-01 0 1602 0 1602 0 1602 0 1602 #> 6371 TCGA-63-7020-01 0 2133 0 2133 0 2133 0 2133 #> 6372 TCGA-63-7021-01 0 2142 0 2142 0 2142 1 1503 #> 6373 TCGA-63-7022-01 0 2073 0 2073 0 2073 0 2073 #> 6374 TCGA-63-7023-01 0 1682 0 1682 0 1682 0 1682 #> 6375 TCGA-63-A5M9-01 0 0 0 0 NA NA 0 0 #> 6376 TCGA-63-A5MB-01 0 3123 0 3123 0 3123 0 3123 #> 6377 TCGA-63-A5MG-01 0 2148 0 2148 0 2148 0 2148 #> 6378 TCGA-63-A5MH-01 0 2026 0 2026 0 2026 0 2026 #> 6379 TCGA-63-A5MI-01 0 1784 0 1784 0 1784 0 1784 #> 6380 TCGA-63-A5MJ-01 0 1824 0 1824 0 1824 0 1824 #> 6381 TCGA-63-A5ML-01 0 1386 0 1386 0 1386 0 1386 #> 6382 TCGA-63-A5MM-01 1 456 1 456 1 218 1 218 #> 6383 TCGA-63-A5MN-01 1 345 1 345 1 320 1 320 #> 6384 TCGA-63-A5MP-01 0 769 0 769 1 511 1 511 #> 6385 TCGA-63-A5MR-01 0 2716 0 2716 0 2716 0 2716 #> 6386 TCGA-63-A5MS-01 0 2381 0 2381 0 2381 0 2381 #> 6387 TCGA-63-A5MT-01 0 498 0 498 1 427 1 427 #> 6388 TCGA-63-A5MU-01 1 NA 1 NA 1 420 1 420 #> 6389 TCGA-63-A5MV-01 0 1100 0 1100 0 1100 0 1100 #> 6390 TCGA-63-A5MW-01 0 1639 0 1639 0 1639 0 1639 #> 6391 TCGA-63-A5MY-01 0 1052 0 1052 0 1052 0 1052 #> 6392 TCGA-66-2727-01 1 516 NA 516 NA NA 0 516 #> 6393 TCGA-66-2734-01 0 1311 0 1311 NA NA 0 1311 #> 6394 TCGA-66-2737-01 0 61 0 61 NA NA 0 61 #> 6395 TCGA-66-2742-01 0 641 0 641 NA NA 0 641 #> 6396 TCGA-66-2744-01 0 30 0 30 NA NA 0 30 #> 6397 TCGA-66-2753-01 0 31 0 31 NA NA 0 31 #> 6398 TCGA-66-2754-01 0 61 0 61 NA NA 0 61 #> 6399 TCGA-66-2755-01 0 28 0 28 NA NA 0 28 #> 6400 TCGA-66-2756-01 0 30 0 30 NA NA 0 30 #> 6401 TCGA-66-2757-01 1 1338 1 1338 NA NA 1 912 #> 6402 TCGA-66-2758-01 0 639 0 639 0 639 0 639 #> 6403 TCGA-66-2759-01 0 762 0 762 0 762 0 762 #> 6404 TCGA-66-2763-01 0 30 0 30 NA NA 0 30 #> 6405 TCGA-66-2765-01 0 61 0 61 NA NA 0 61 #> 6406 TCGA-66-2766-01 0 31 0 31 NA NA 0 31 #> 6407 TCGA-66-2767-01 0 61 0 61 NA NA 0 61 #> 6408 TCGA-66-2768-01 0 61 0 61 NA NA 0 61 #> 6409 TCGA-66-2769-01 1 215 NA 215 NA NA 0 215 #> 6410 TCGA-66-2770-01 0 700 0 700 NA NA 0 700 #> 6411 TCGA-66-2771-01 0 578 0 578 0 578 0 578 #> 6412 TCGA-66-2773-01 1 92 0 92 NA NA 0 92 #> 6413 TCGA-66-2777-01 0 61 0 61 NA NA 0 61 #> 6414 TCGA-66-2778-01 0 578 0 578 0 578 0 578 #> 6415 TCGA-66-2780-01 1 366 NA 366 NA NA 0 366 #> 6416 TCGA-66-2781-01 0 121 0 121 NA NA 0 121 #> 6417 TCGA-66-2782-01 1 365 1 365 NA NA 1 304 #> 6418 TCGA-66-2783-01 0 759 0 759 0 759 0 759 #> 6419 TCGA-66-2785-01 0 60 0 60 NA NA 0 60 #> 6420 TCGA-66-2786-01 0 790 0 790 NA NA 0 790 #> 6421 TCGA-66-2787-01 0 1217 0 1217 NA NA 0 1217 #> 6422 TCGA-66-2788-01 0 699 0 699 NA NA 0 699 #> 6423 TCGA-66-2789-01 1 123 0 123 NA NA 0 123 #> 6424 TCGA-66-2790-01 0 699 0 699 NA NA 1 699 #> 6425 TCGA-66-2791-01 1 153 NA 153 NA NA 0 153 #> 6426 TCGA-66-2792-01 0 913 0 913 0 913 0 913 #> 6427 TCGA-66-2793-01 1 306 0 306 NA NA 0 306 #> 6428 TCGA-66-2794-01 0 1645 0 1645 0 1645 0 1645 #> 6429 TCGA-66-2795-01 0 122 0 122 NA NA 0 122 #> 6430 TCGA-66-2800-01 0 1492 0 1492 NA NA 0 1492 #> 6431 TCGA-68-7755-01 0 83 0 83 NA NA 0 83 #> 6432 TCGA-68-7756-01 0 202 0 202 NA NA 0 202 #> 6433 TCGA-68-7757-01 0 211 0 211 NA NA 0 211 #> 6434 TCGA-68-8250-01 0 244 0 244 NA NA 0 244 #> 6435 TCGA-68-8251-01 0 406 0 406 NA NA 0 406 #> 6436 TCGA-68-A59I-01 0 492 0 492 NA NA 1 159 #> 6437 TCGA-68-A59J-01 0 448 0 448 0 448 0 448 #> 6438 TCGA-6A-AB49-01 1 NA 0 NA NA NA 0 NA #> 6439 TCGA-70-6722-01 0 367 0 367 NA NA 1 293 #> 6440 TCGA-70-6723-01 0 375 0 375 NA NA 1 312 #> 6441 TCGA-77-6842-01 1 899 NA 899 NA NA 1 201 #> 6442 TCGA-77-6843-01 1 2224 NA 2224 NA NA 0 2224 #> 6443 TCGA-77-6844-01 1 2284 NA 2284 1 1788 1 1788 #> 6444 TCGA-77-6845-01 1 708 NA 708 NA NA 0 708 #> 6445 TCGA-77-7138-01 1 340 NA 340 NA NA 0 340 #> 6446 TCGA-77-7138-11 1 340 NA 340 NA NA 0 340 #> 6447 TCGA-77-7139-01 0 4261 0 4261 0 4261 0 4261 #> 6448 TCGA-77-7140-01 1 632 NA 632 NA NA 1 250 #> 6449 TCGA-77-7141-01 0 15 0 15 NA NA 0 15 #> 6450 TCGA-77-7142-01 0 2227 0 2227 NA NA 0 2227 #> 6451 TCGA-77-7142-11 0 2227 0 2227 NA NA 0 2227 #> 6452 TCGA-77-7335-01 1 2133 NA 2133 NA NA 0 2133 #> 6453 TCGA-77-7335-11 1 2133 NA 2133 NA NA 0 2133 #> 6454 TCGA-77-7337-01 1 3253 NA 3253 NA NA 0 3253 #> 6455 TCGA-77-7337-11 1 3253 NA 3253 NA NA 0 3253 #> 6456 TCGA-77-7338-01 1 5 NA 5 NA NA 0 5 #> 6457 TCGA-77-7338-11 1 5 NA 5 NA NA 0 5 #> 6458 TCGA-77-7463-01 1 1423 NA 1423 NA NA 0 1423 #> 6459 TCGA-77-7465-01 0 990 0 990 0 990 0 990 #> 6460 TCGA-77-8007-01 1 198 NA 198 NA NA 1 139 #> 6461 TCGA-77-8007-11 1 198 NA 198 NA NA 1 139 #> 6462 TCGA-77-8008-01 1 2639 NA 2639 NA NA 0 2639 #> 6463 TCGA-77-8008-11 1 2639 NA 2639 NA NA 0 2639 #> 6464 TCGA-77-8009-01 1 1695 NA 1695 1 607 1 607 #> 6465 TCGA-77-8128-01 1 1150 NA 1150 NA NA 0 1150 #> 6466 TCGA-77-8130-01 0 4765 0 4765 0 4765 1 4471 #> 6467 TCGA-77-8131-01 1 383 NA 383 NA NA 0 383 #> 6468 TCGA-77-8133-01 1 1640 NA 1640 NA NA 0 1640 #> 6469 TCGA-77-8136-01 1 1189 NA 1189 NA NA 1 301 #> 6470 TCGA-77-8138-01 1 539 1 539 NA NA 1 289 #> 6471 TCGA-77-8139-01 0 3166 0 3166 0 3166 0 3166 #> 6472 TCGA-77-8140-01 1 351 NA 351 NA NA 0 351 #> 6473 TCGA-77-8143-01 1 803 1 803 NA NA 1 803 #> 6474 TCGA-77-8144-01 0 833 0 833 0 833 0 833 #> 6475 TCGA-77-8145-01 1 212 NA 212 NA NA 1 136 #> 6476 TCGA-77-8146-01 0 3189 0 3189 0 3189 0 3189 #> 6477 TCGA-77-8148-01 0 2023 0 2023 0 2023 0 2023 #> 6478 TCGA-77-8150-01 1 1655 1 1655 NA NA 1 1278 #> 6479 TCGA-77-8153-01 0 1992 0 1992 0 1992 0 1992 #> 6480 TCGA-77-8154-01 0 1841 0 1841 0 1841 0 1841 #> 6481 TCGA-77-8156-01 0 1106 0 1106 0 1106 0 1106 #> 6482 TCGA-77-A5FZ-01 1 3838 NA 3838 0 3838 0 3838 #> 6483 TCGA-77-A5G1-01 0 4026 0 4026 0 4026 1 2197 #> 6484 TCGA-77-A5G3-01 0 4570 0 4570 0 4570 0 4570 #> 6485 TCGA-77-A5G6-01 1 678 1 678 1 392 1 392 #> 6486 TCGA-77-A5G7-01 1 180 NA 180 0 180 0 180 #> 6487 TCGA-77-A5G8-01 0 1884 0 1884 NA NA 0 1884 #> 6488 TCGA-77-A5GA-01 0 1280 0 1280 0 1280 0 1280 #> 6489 TCGA-77-A5GB-01 1 937 NA 937 0 937 1 229 #> 6490 TCGA-77-A5GF-01 1 840 1 840 1 722 1 722 #> 6491 TCGA-77-A5GH-01 0 1182 0 1182 0 1182 0 1182 #> 6492 TCGA-79-5596-01 0 NA 0 NA NA NA 0 NA #> 6493 TCGA-85-6175-01 1 294 1 294 NA NA 1 294 #> 6494 TCGA-85-6560-01 0 1259 0 1259 0 1259 0 1259 #> 6495 TCGA-85-6561-01 0 1224 0 1224 0 1224 0 1224 #> 6496 TCGA-85-6798-01 1 195 1 195 1 180 1 180 #> 6497 TCGA-85-7696-01 0 1111 0 1111 0 1111 0 1111 #> 6498 TCGA-85-7697-01 0 1063 0 1063 0 1063 0 1063 #> 6499 TCGA-85-7698-01 0 952 0 952 1 650 1 650 #> 6500 TCGA-85-7699-01 1 1001 1 1001 1 760 1 760 #> 6501 TCGA-85-7710-01 0 42 0 42 0 42 0 42 #> 6502 TCGA-85-7710-11 0 42 0 42 0 42 0 42 #> 6503 TCGA-85-7843-01 0 35 0 35 NA NA 0 35 #> 6504 TCGA-85-7844-01 0 911 0 911 0 911 0 911 #> 6505 TCGA-85-7950-01 0 576 0 576 0 576 0 576 #> 6506 TCGA-85-8048-01 0 765 0 765 0 765 0 765 #> 6507 TCGA-85-8049-01 0 579 0 579 0 579 0 579 #> 6508 TCGA-85-8052-01 0 734 0 734 0 734 0 734 #> 6509 TCGA-85-8070-01 0 960 0 960 0 960 0 960 #> 6510 TCGA-85-8071-01 0 815 0 815 0 815 0 815 #> 6511 TCGA-85-8072-01 0 932 0 932 0 932 0 932 #> 6512 TCGA-85-8276-01 0 1050 0 1050 1 1048 1 1048 #> 6513 TCGA-85-8277-01 1 307 0 307 0 307 0 307 #> 6514 TCGA-85-8287-01 1 23 0 23 0 23 0 23 #> 6515 TCGA-85-8288-01 1 402 0 402 0 402 0 402 #> 6516 TCGA-85-8350-01 0 683 0 683 0 683 0 683 #> 6517 TCGA-85-8351-01 0 510 0 510 0 510 0 510 #> 6518 TCGA-85-8352-01 1 161 1 161 1 128 1 128 #> 6519 TCGA-85-8353-01 1 94 1 94 NA NA 1 94 #> 6520 TCGA-85-8354-01 0 995 0 995 0 995 0 995 #> 6521 TCGA-85-8355-01 0 61 0 61 0 61 0 61 #> 6522 TCGA-85-8479-01 0 468 0 468 0 468 0 468 #> 6523 TCGA-85-8481-01 1 236 0 236 NA NA 0 236 #> 6524 TCGA-85-8580-01 0 1113 0 1113 0 1113 0 1113 #> 6525 TCGA-85-8582-01 0 1160 0 1160 0 1160 0 1160 #> 6526 TCGA-85-8584-01 1 383 0 383 0 383 0 383 #> 6527 TCGA-85-8664-01 1 550 1 550 1 434 1 434 #> 6528 TCGA-85-8666-01 1 687 0 687 0 687 0 687 #> 6529 TCGA-85-A4CL-01 1 921 0 921 0 921 0 921 #> 6530 TCGA-85-A4CN-01 0 1038 0 1038 0 1038 0 1038 #> 6531 TCGA-85-A4JB-01 0 942 0 942 0 942 0 942 #> 6532 TCGA-85-A4JC-01 1 604 1 604 1 548 1 548 #> 6533 TCGA-85-A4PA-01 0 741 0 741 0 741 0 741 #> 6534 TCGA-85-A4QQ-01 1 927 0 927 0 927 0 927 #> 6535 TCGA-85-A4QR-01 0 600 0 600 0 600 0 600 #> 6536 TCGA-85-A50M-01 1 826 0 826 0 826 0 826 #> 6537 TCGA-85-A50Z-01 0 493 0 493 0 493 1 462 #> 6538 TCGA-85-A510-01 0 482 0 482 1 363 1 363 #> 6539 TCGA-85-A511-01 1 455 1 455 1 390 1 390 #> 6540 TCGA-85-A512-01 0 465 0 465 0 465 0 465 #> 6541 TCGA-85-A513-01 0 910 0 910 0 910 0 910 #> 6542 TCGA-85-A53L-01 0 377 0 377 0 377 0 377 #> 6543 TCGA-85-A5B5-01 0 111 0 111 0 111 0 111 #> 6544 TCGA-90-6837-01 0 758 0 758 0 758 0 758 #> 6545 TCGA-90-6837-11 0 758 0 758 0 758 0 758 #> 6546 TCGA-90-7766-01 0 289 0 289 NA NA 1 289 #> 6547 TCGA-90-7767-01 0 89 0 89 NA NA 0 89 #> 6548 TCGA-90-7767-11 0 89 0 89 NA NA 0 89 #> 6549 TCGA-90-7769-01 0 358 0 358 0 358 0 358 #> 6550 TCGA-90-7964-01 0 428 0 428 0 428 0 428 #> 6551 TCGA-90-A4ED-01 0 615 0 615 0 615 0 615 #> 6552 TCGA-90-A4EE-01 0 688 0 688 0 688 0 688 #> 6553 TCGA-90-A59Q-01 1 322 1 322 1 274 1 274 #> 6554 TCGA-92-7340-01 0 82 0 82 NA NA 0 82 #> 6555 TCGA-92-7340-11 0 82 0 82 NA NA 0 82 #> 6556 TCGA-92-7341-01 0 106 0 106 NA NA 0 106 #> 6557 TCGA-92-8063-01 0 122 0 122 0 122 0 122 #> 6558 TCGA-92-8064-01 0 160 0 160 0 160 0 160 #> 6559 TCGA-92-8065-01 0 70 0 70 0 70 0 70 #> 6560 TCGA-94-7033-01 0 640 0 640 0 640 0 640 #> 6561 TCGA-94-7557-01 1 5 0 5 0 5 0 5 #> 6562 TCGA-94-7943-01 0 559 0 559 1 556 1 556 #> 6563 TCGA-94-8035-01 0 122 0 122 0 122 0 122 #> 6564 TCGA-94-8490-01 0 153 0 153 NA NA 0 153 #> 6565 TCGA-94-8491-01 0 810 0 810 NA NA 1 641 #> 6566 TCGA-94-A4VJ-01 0 430 0 430 0 430 0 430 #> 6567 TCGA-94-A5I4-01 0 491 0 491 1 314 1 314 #> 6568 TCGA-94-A5I6-01 0 538 0 538 NA NA 1 481 #> 6569 TCGA-96-7544-01 1 2160 0 2160 0 2160 0 2160 #> 6570 TCGA-96-7545-01 1 1736 NA 1736 NA NA 1 1693 #> 6571 TCGA-96-8169-01 0 557 0 557 0 557 0 557 #> 6572 TCGA-96-8170-01 0 531 0 531 0 531 0 531 #> 6573 TCGA-96-A4JK-01 0 589 0 589 0 589 0 589 #> 6574 TCGA-96-A4JL-01 0 842 0 842 0 842 0 842 #> 6575 TCGA-98-7454-01 0 652 0 652 0 652 0 652 #> 6576 TCGA-98-8020-01 1 84 1 84 NA NA 1 11 #> 6577 TCGA-98-8022-01 1 933 0 933 0 933 0 933 #> 6578 TCGA-98-8023-01 0 649 0 649 0 649 0 649 #> 6579 TCGA-98-A538-01 0 826 0 826 0 826 0 826 #> 6580 TCGA-98-A539-01 0 173 0 173 NA NA 1 173 #> 6581 TCGA-98-A53A-01 1 552 NA 552 0 552 0 552 #> 6582 TCGA-98-A53B-01 1 61 0 61 0 61 0 61 #> 6583 TCGA-98-A53C-01 0 822 0 822 0 822 0 822 #> 6584 TCGA-98-A53D-01 1 645 1 645 1 413 1 413 #> 6585 TCGA-98-A53H-01 0 618 0 618 0 618 1 427 #> 6586 TCGA-98-A53I-01 0 565 0 565 0 565 0 565 #> 6587 TCGA-98-A53J-01 0 630 0 630 0 630 0 630 #> 6588 TCGA-J1-A4AH-01 0 581 0 581 0 581 0 581 #> 6589 TCGA-L3-A4E7-01 0 392 0 392 0 392 0 392 #> 6590 TCGA-L3-A524-01 1 490 0 490 0 490 0 490 #> 6591 TCGA-LA-A446-01 0 401 0 401 0 401 0 401 #> 6592 TCGA-LA-A7SW-01 1 408 1 408 NA NA 1 235 #> 6593 TCGA-MF-A522-01 1 360 1 360 NA NA 1 173 #> 6594 TCGA-NC-A5HD-01 1 2 0 2 NA NA 0 2 #> 6595 TCGA-NC-A5HE-01 0 2336 0 2336 0 2336 0 2336 #> 6596 TCGA-NC-A5HF-01 1 138 1 138 NA NA 1 132 #> 6597 TCGA-NC-A5HG-01 0 1963 0 1963 0 1963 0 1963 #> 6598 TCGA-NC-A5HH-01 0 37 0 37 0 37 0 37 #> 6599 TCGA-NC-A5HI-01 0 1743 0 1743 0 1743 1 70 #> 6600 TCGA-NC-A5HJ-01 1 418 1 418 0 418 1 328 #> 6601 TCGA-NC-A5HK-01 0 128 0 128 0 128 0 128 #> 6602 TCGA-NC-A5HL-01 1 88 0 88 NA NA 0 88 #> 6603 TCGA-NC-A5HM-01 0 1212 0 1212 0 1212 0 1212 #> 6604 TCGA-NC-A5HN-01 0 1499 0 1499 0 1499 0 1499 #> 6605 TCGA-NC-A5HO-01 0 1336 0 1336 0 1336 0 1336 #> 6606 TCGA-NC-A5HP-01 1 770 1 770 NA NA 1 317 #> 6607 TCGA-NC-A5HQ-01 1 448 NA 448 0 448 0 448 #> 6608 TCGA-NC-A5HR-01 0 1244 0 1244 0 1244 0 1244 #> 6609 TCGA-NC-A5HT-01 0 804 0 804 1 203 1 203 #> 6610 TCGA-NK-A5CR-01 0 2542 0 2542 NA NA 0 2542 #> 6611 TCGA-NK-A5CT-01 0 1997 0 1997 NA NA 1 1990 #> 6612 TCGA-NK-A5CX-01 0 111 0 111 NA NA 0 111 #> 6613 TCGA-NK-A5D1-01 0 511 0 511 NA NA 1 151 #> 6614 TCGA-NK-A7XE-01 0 13 0 13 NA NA 0 13 #> 6615 TCGA-O2-A52N-01 1 1006 0 1006 NA NA 0 1006 #> 6616 TCGA-O2-A52Q-01 1 113 1 113 NA NA 1 87 #> 6617 TCGA-O2-A52S-01 1 387 1 387 NA NA 1 246 #> 6618 TCGA-O2-A52V-01 1 1335 0 1335 NA NA 1 690 #> 6619 TCGA-O2-A52W-01 1 261 0 261 NA NA 0 261 #> 6620 TCGA-O2-A5IB-01 1 340 1 340 NA NA 1 253 #> 6621 TCGA-XC-AA0X-01 1 6 0 6 NA NA 0 6 #> 6622 TCGA-3H-AB3K-01 1 1715 1 1715 NA NA 1 841 #> 6623 TCGA-3H-AB3L-01 1 361 1 361 NA NA 1 222 #> 6624 TCGA-3H-AB3M-01 1 885 1 885 NA NA 1 107 #> 6625 TCGA-3H-AB3O-01 1 1302 1 1302 NA NA 1 627 #> 6626 TCGA-3H-AB3S-01 1 385 1 385 NA NA 1 186 #> 6627 TCGA-3H-AB3T-01 1 414 1 414 NA NA 1 312 #> 6628 TCGA-3H-AB3U-01 1 826 1 826 NA NA 1 108 #> 6629 TCGA-3H-AB3X-01 0 1490 0 1490 NA NA 0 1490 #> 6630 TCGA-3U-A98D-01 1 142 NA 142 NA NA 1 125 #> 6631 TCGA-3U-A98E-01 0 1916 0 1916 NA NA 1 1257 #> 6632 TCGA-3U-A98F-01 1 536 1 536 NA NA 1 365 #> 6633 TCGA-3U-A98G-01 1 630 1 630 NA NA 1 497 #> 6634 TCGA-3U-A98H-01 1 1156 1 1156 NA NA 1 798 #> 6635 TCGA-3U-A98I-01 1 860 1 860 NA NA 1 404 #> 6636 TCGA-3U-A98J-01 1 741 1 741 NA NA 1 741 #> 6637 TCGA-LK-A4NW-01 1 546 1 546 NA NA 1 546 #> 6638 TCGA-LK-A4NY-01 1 168 0 168 0 168 0 168 #> 6639 TCGA-LK-A4NZ-01 1 244 1 244 NA NA 1 244 #> 6640 TCGA-LK-A4O0-01 1 185 0 185 0 185 0 185 #> 6641 TCGA-LK-A4O2-01 1 57 1 57 NA NA 1 57 #> 6642 TCGA-LK-A4O4-01 1 949 0 949 0 949 0 949 #> 6643 TCGA-LK-A4O5-01 1 387 1 387 NA NA 1 387 #> 6644 TCGA-LK-A4O6-01 1 448 1 448 NA NA 1 448 #> 6645 TCGA-LK-A4O7-01 1 350 1 350 NA NA 1 350 #> 6646 TCGA-MQ-A4KX-01 1 2459 NA 2459 1 471 1 471 #> 6647 TCGA-MQ-A4LC-01 1 2790 0 2790 1 1908 1 1908 #> 6648 TCGA-MQ-A4LI-01 1 572 1 572 NA NA 1 416 #> 6649 TCGA-MQ-A4LJ-01 1 709 NA 709 NA NA 1 409 #> 6650 TCGA-MQ-A4LM-01 1 158 NA 158 NA NA 1 113 #> 6651 TCGA-MQ-A4LP-01 1 527 NA 527 NA NA 0 527 #> 6652 TCGA-MQ-A4LV-01 1 107 0 107 1 99 1 99 #> 6653 TCGA-MQ-A6BL-01 1 333 NA 333 NA NA 1 186 #> 6654 TCGA-MQ-A6BN-01 1 757 0 757 1 485 1 485 #> 6655 TCGA-MQ-A6BQ-01 0 2359 0 2359 NA NA 0 2359 #> 6656 TCGA-MQ-A6BR-01 0 2090 0 2090 NA NA 1 665 #> 6657 TCGA-MQ-A6BS-01 1 608 0 608 0 608 0 608 #> 6658 TCGA-NQ-A57I-01 1 20 1 20 NA NA 1 20 #> 6659 TCGA-NQ-A638-01 0 0 0 0 0 0 0 0 #> 6660 TCGA-SC-A6LM-01 1 881 1 881 NA NA 1 363 #> 6661 TCGA-SC-A6LN-01 1 414 0 414 0 414 0 414 #> 6662 TCGA-SC-A6LP-01 1 78 1 78 NA NA 1 78 #> 6663 TCGA-SC-A6LQ-01 1 297 1 297 1 238 1 238 #> 6664 TCGA-SC-A6LR-01 0 1168 0 1168 NA NA 0 1168 #> 6665 TCGA-SC-AA5Z-01 0 664 0 664 NA NA 0 664 #> 6666 TCGA-SH-A7BC-01 1 727 1 727 NA NA 1 507 #> 6667 TCGA-SH-A7BD-01 1 459 1 459 NA NA 1 200 #> 6668 TCGA-SH-A7BH-01 1 243 1 243 NA NA 1 125 #> 6669 TCGA-SH-A9CT-01 1 449 1 449 NA NA 1 449 #> 6670 TCGA-SH-A9CU-01 1 732 1 732 NA NA 1 732 #> 6671 TCGA-TS-A7OU-01 1 1675 NA 1675 NA NA 0 1675 #> 6672 TCGA-TS-A7OY-01 1 255 NA 255 NA NA 0 255 #> 6673 TCGA-TS-A7OZ-01 1 844 NA 844 NA NA 0 844 #> 6674 TCGA-TS-A7P0-01 1 1261 NA 1261 NA NA 1 277 #> 6675 TCGA-TS-A7P1-01 1 563 NA 563 NA NA 1 494 #> 6676 TCGA-TS-A7P3-01 1 689 NA 689 NA NA 0 689 #> 6677 TCGA-TS-A7P6-01 1 283 NA 283 NA NA 0 283 #> 6678 TCGA-TS-A7P7-01 1 591 NA 591 NA NA 0 591 #> 6679 TCGA-TS-A7P8-01 1 457 NA 457 NA NA 1 301 #> 6680 TCGA-TS-A7PB-01 1 982 NA 982 NA NA 0 982 #> 6681 TCGA-TS-A8AF-01 1 358 NA 358 NA NA 1 325 #> 6682 TCGA-TS-A8AI-01 1 328 NA 328 NA NA 0 328 #> 6683 TCGA-TS-A8AS-01 1 795 NA 795 NA NA 0 795 #> 6684 TCGA-TS-A8AV-01 1 NA NA NA NA NA 0 NA #> 6685 TCGA-TS-A8AY-01 1 469 NA 469 NA NA 0 469 #> 6686 TCGA-UD-AABY-01 1 843 1 843 NA NA 1 47 #> 6687 TCGA-UD-AABZ-01 1 197 1 197 NA NA 1 197 #> 6688 TCGA-UD-AAC1-01 1 789 1 789 NA NA 1 85 #> 6689 TCGA-UD-AAC4-01 1 719 1 719 NA NA 1 267 #> 6690 TCGA-UD-AAC5-01 1 253 1 253 NA NA 1 230 #> 6691 TCGA-UD-AAC6-01 1 456 1 456 NA NA 1 126 #> 6692 TCGA-UD-AAC7-01 1 406 1 406 NA NA 1 265 #> 6693 TCGA-UT-A88C-01 1 863 1 863 1 479 1 479 #> 6694 TCGA-UT-A88D-01 1 823 0 823 0 823 0 823 #> 6695 TCGA-UT-A88E-01 1 434 1 434 NA NA 1 121 #> 6696 TCGA-UT-A88G-01 1 76 1 76 NA NA 1 44 #> 6697 TCGA-UT-A97Y-01 1 144 1 144 NA NA 1 144 #> 6698 TCGA-XT-AASU-01 1 142 1 142 1 133 1 133 #> 6699 TCGA-YS-A95B-01 1 39 1 39 NA NA 1 39 #> 6700 TCGA-YS-A95C-01 1 133 0 133 0 133 0 133 #> 6701 TCGA-YS-AA4M-01 1 84 1 84 NA NA 1 NA #> 6702 TCGA-ZN-A9VO-01 0 261 0 261 NA NA 0 261 #> 6703 TCGA-ZN-A9VP-01 0 228 0 228 NA NA 0 228 #> 6704 TCGA-ZN-A9VQ-01 0 499 0 499 NA NA 1 313 #> 6705 TCGA-ZN-A9VS-01 0 1228 0 1228 NA NA 1 1025 #> 6706 TCGA-ZN-A9VU-01 0 977 0 977 NA NA 1 585 #> 6707 TCGA-ZN-A9VV-01 0 1309 0 1309 NA NA 1 676 #> 6708 TCGA-ZN-A9VW-01 1 84 1 84 NA NA 1 NA #> 6709 TCGA-04-1331-01 1 1336 1 1336 1 459 1 459 #> 6710 TCGA-04-1332-01 1 1247 1 1247 NA NA 1 393 #> 6711 TCGA-04-1337-01 1 61 1 61 NA NA 1 61 #> 6712 TCGA-04-1338-01 0 1418 0 1418 NA NA 1 380 #> 6713 TCGA-04-1341-01 0 33 0 33 0 33 0 33 #> 6714 TCGA-04-1343-01 1 361 1 361 NA NA 1 361 #> 6715 TCGA-04-1347-01 0 1919 0 1919 NA NA 0 1919 #> 6716 TCGA-04-1348-01 1 1483 1 1483 1 575 1 575 #> 6717 TCGA-04-1350-01 1 1946 1 1946 NA NA 1 111 #> 6718 TCGA-04-1356-01 1 1499 1 1499 NA NA 1 156 #> 6719 TCGA-04-1357-01 0 NA 0 NA NA NA 0 NA #> 6720 TCGA-04-1361-01 0 989 0 989 NA NA 1 927 #> 6721 TCGA-04-1362-01 1 1348 1 1348 NA NA 1 223 #> 6722 TCGA-04-1364-01 1 1024 1 1024 NA NA 1 288 #> 6723 TCGA-04-1365-01 0 2329 0 2329 1 1328 1 1328 #> 6724 TCGA-04-1514-01 1 1720 0 1720 1 1221 1 1221 #> 6725 TCGA-04-1517-01 1 608 1 608 1 349 1 349 #> 6726 TCGA-04-1519-01 0 24 0 24 NA NA 0 24 #> 6727 TCGA-04-1530-01 1 3622 1 3622 1 350 1 350 #> 6728 TCGA-04-1536-01 1 885 1 885 NA NA 1 498 #> 6729 TCGA-04-1542-01 1 2561 1 2561 1 1020 1 1020 #> 6730 TCGA-04-1648-01 1 871 NA 871 NA NA 1 412 #> 6731 TCGA-04-1651-01 1 1102 NA 1102 NA NA 1 990 #> 6732 TCGA-04-1655-01 1 1380 NA 1380 NA NA 1 819 #> 6733 TCGA-09-0364-01 1 887 1 887 1 395 1 395 #> 6734 TCGA-09-0366-01 1 1757 1 1757 NA NA 1 190 #> 6735 TCGA-09-0367-01 1 547 1 547 NA NA 1 547 #> 6736 TCGA-09-0369-01 1 1082 1 1082 1 274 1 274 #> 6737 TCGA-09-1659-01 1 304 1 304 NA NA 1 304 #> 6738 TCGA-09-1661-01 1 1169 1 1169 NA NA 1 1169 #> 6739 TCGA-09-1662-01 1 2717 1 2717 NA NA 1 1046 #> 6740 TCGA-09-1665-01 1 1266 1 1266 1 468 1 468 #> 6741 TCGA-09-1666-01 0 1752 0 1752 1 480 1 480 #> 6742 TCGA-09-1667-01 0 1882 0 1882 1 460 1 460 #> 6743 TCGA-09-1668-01 0 1684 0 1684 0 1684 0 1684 #> 6744 TCGA-09-1669-01 0 928 0 928 0 928 0 928 #> 6745 TCGA-09-1670-01 0 547 0 547 1 547 1 547 #> 6746 TCGA-09-1673-01 0 92 0 92 NA NA 0 92 #> 6747 TCGA-09-1674-01 0 260 0 260 0 260 0 260 #> 6748 TCGA-09-2044-01 0 186 0 186 0 186 0 186 #> 6749 TCGA-09-2045-01 1 1069 1 1069 NA NA 1 631 #> 6750 TCGA-09-2048-01 1 138 1 138 NA NA 1 138 #> 6751 TCGA-09-2051-01 0 1919 0 1919 1 583 1 583 #> 6752 TCGA-09-2053-01 0 1209 0 1209 0 1209 0 1209 #> 6753 TCGA-09-2054-01 1 637 1 637 NA NA 1 637 #> 6754 TCGA-09-2056-01 0 379 0 379 0 379 0 379 #> 6755 TCGA-10-0926-01 1 788 1 788 1 287 1 287 #> 6756 TCGA-10-0927-01 1 2490 1 2490 1 1001 1 1001 #> 6757 TCGA-10-0928-01 1 563 1 563 NA NA 1 563 #> 6758 TCGA-10-0931-01 1 1000 1 1000 1 300 1 300 #> 6759 TCGA-10-0933-01 1 446 1 446 1 356 1 356 #> 6760 TCGA-10-0934-01 1 204 1 204 NA NA 1 111 #> 6761 TCGA-10-0936-01 1 1123 1 1123 NA NA 1 1123 #> 6762 TCGA-10-0937-01 1 608 1 608 1 235 1 235 #> 6763 TCGA-10-0938-01 1 636 1 636 NA NA 1 362 #> 6764 TCGA-13-0714-01 1 189 1 189 NA NA 1 110 #> 6765 TCGA-13-0720-01 1 1355 1 1355 1 292 1 292 #> 6766 TCGA-13-0724-01 1 83 1 83 NA NA 1 83 #> 6767 TCGA-13-0725-01 1 377 1 377 1 190 1 190 #> 6768 TCGA-13-0726-01 1 949 1 949 1 392 1 392 #> 6769 TCGA-13-0727-01 1 462 1 462 1 253 1 253 #> 6770 TCGA-13-0730-01 1 542 NA 542 NA NA 0 542 #> 6771 TCGA-13-0760-01 1 351 NA 351 NA NA 0 351 #> 6772 TCGA-13-0762-01 0 3400 0 3400 1 1003 1 1003 #> 6773 TCGA-13-0765-01 1 1389 1 1389 1 668 1 668 #> 6774 TCGA-13-0766-01 1 1725 1 1725 1 628 1 628 #> 6775 TCGA-13-0768-01 1 1784 1 1784 1 398 1 398 #> 6776 TCGA-13-0795-01 1 619 1 619 1 325 1 325 #> 6777 TCGA-13-0797-01 0 2121 0 2121 1 525 1 525 #> 6778 TCGA-13-0799-01 0 2535 0 2535 1 1262 1 1262 #> 6779 TCGA-13-0800-01 0 2661 0 2661 1 1396 1 1396 #> 6780 TCGA-13-0801-01 1 1399 1 1399 1 345 1 345 #> 6781 TCGA-13-0804-01 1 1073 1 1073 1 329 1 329 #> 6782 TCGA-13-0883-01 1 2097 1 2097 1 819 1 819 #> 6783 TCGA-13-0884-01 1 3260 1 3260 1 1251 1 1251 #> 6784 TCGA-13-0885-01 0 3388 0 3388 0 3388 0 3388 #> 6785 TCGA-13-0886-01 0 4665 0 4665 0 4665 0 4665 #> 6786 TCGA-13-0887-01 1 2028 1 2028 1 514 1 514 #> 6787 TCGA-13-0888-01 1 2811 0 2811 NA NA 0 2811 #> 6788 TCGA-13-0890-01 0 4424 0 4424 0 4424 0 4424 #> 6789 TCGA-13-0891-01 1 3128 1 3128 NA NA 1 762 #> 6790 TCGA-13-0893-01 1 1319 1 1319 NA NA 1 461 #> 6791 TCGA-13-0897-01 1 2182 1 2182 1 554 1 554 #> 6792 TCGA-13-0899-01 1 2012 1 2012 1 547 1 547 #> 6793 TCGA-13-0900-01 0 4077 0 4077 0 4077 0 4077 #> 6794 TCGA-13-0901-01 0 589 0 589 1 390 1 390 #> 6795 TCGA-13-0905-01 0 3746 0 3746 1 1535 1 1535 #> 6796 TCGA-13-0906-01 0 3619 0 3619 0 3619 0 3619 #> 6797 TCGA-13-0908-01 1 1843 1 1843 NA NA 1 552 #> 6798 TCGA-13-0911-01 1 1355 1 1355 NA NA 1 279 #> 6799 TCGA-13-0913-02 0 3325 0 3325 1 871 1 871 #> 6800 TCGA-13-0916-01 0 1785 0 1785 0 1785 0 1785 #> 6801 TCGA-13-0919-01 0 2571 0 2571 0 2571 0 2571 #> 6802 TCGA-13-0920-01 1 1484 1 1484 1 297 1 297 #> 6803 TCGA-13-0923-01 0 2547 0 2547 1 1719 1 1719 #> 6804 TCGA-13-0924-01 0 2614 0 2614 NA NA 1 962 #> 6805 TCGA-13-1403-01 1 2345 1 2345 1 418 1 418 #> 6806 TCGA-13-1404-01 0 2469 0 2469 1 1581 1 1581 #> 6807 TCGA-13-1405-01 1 868 1 868 NA NA 1 228 #> 6808 TCGA-13-1407-01 0 2534 0 2534 1 1333 1 1333 #> 6809 TCGA-13-1408-01 1 1680 1 1680 NA NA 1 765 #> 6810 TCGA-13-1409-01 1 1742 1 1742 NA NA 1 690 #> 6811 TCGA-13-1410-01 0 2464 0 2464 NA NA 1 319 #> 6812 TCGA-13-1411-01 1 531 1 531 NA NA 1 238 #> 6813 TCGA-13-1477-01 1 1662 1 1662 NA NA 1 235 #> 6814 TCGA-13-1481-01 1 2648 0 2648 0 2648 0 2648 #> 6815 TCGA-13-1482-01 1 1877 1 1877 NA NA 1 602 #> 6816 TCGA-13-1483-01 1 895 1 895 NA NA 1 297 #> 6817 TCGA-13-1485-01 1 629 1 629 NA NA 1 170 #> 6818 TCGA-13-1487-01 1 681 1 681 NA NA 1 412 #> 6819 TCGA-13-1488-01 1 2154 1 2154 NA NA 1 351 #> 6820 TCGA-13-1489-02 1 2553 0 2553 1 806 1 806 #> 6821 TCGA-13-1489-01 1 2553 0 2553 1 806 1 806 #> 6822 TCGA-13-1492-01 1 3819 0 3819 0 3819 0 3819 #> 6823 TCGA-13-1495-01 1 2749 1 2749 1 977 1 977 #> 6824 TCGA-13-1496-01 1 129 NA 129 NA NA 0 129 #> 6825 TCGA-13-1497-01 0 3871 0 3871 1 813 1 813 #> 6826 TCGA-13-1498-01 1 2012 1 2012 NA NA 1 534 #> 6827 TCGA-13-1499-01 0 3500 0 3500 1 583 1 583 #> 6828 TCGA-13-1501-01 1 1314 1 1314 NA NA 1 392 #> 6829 TCGA-13-1505-01 0 1998 0 1998 1 1561 1 1561 #> 6830 TCGA-13-1506-01 1 1039 1 1039 1 666 1 666 #> 6831 TCGA-13-1507-01 1 1993 1 1993 1 324 1 324 #> 6832 TCGA-13-1509-01 0 2438 0 2438 NA NA 1 578 #> 6833 TCGA-13-1510-01 1 1359 1 1359 NA NA 1 1189 #> 6834 TCGA-13-1511-01 1 1650 1 1650 NA NA 1 459 #> 6835 TCGA-13-1512-01 0 442 0 442 NA NA 1 427 #> 6836 TCGA-13-2060-01 0 2369 0 2369 NA NA 1 1475 #> 6837 TCGA-13-A5FT-01 0 2143 0 2143 0 2143 0 2143 #> 6838 TCGA-20-0987-01 1 701 1 701 NA NA 1 442 #> 6839 TCGA-20-0991-01 0 797 0 797 0 797 0 797 #> 6840 TCGA-20-1682-01 0 837 0 837 0 837 0 837 #> 6841 TCGA-20-1683-01 0 772 0 772 NA NA 1 618 #> 6842 TCGA-20-1684-01 0 581 0 581 0 581 0 581 #> 6843 TCGA-20-1685-01 0 508 0 508 0 508 0 508 #> 6844 TCGA-20-1686-01 0 89 0 89 0 89 0 89 #> 6845 TCGA-20-1687-01 0 81 0 81 NA NA 0 81 #> 6846 TCGA-23-1021-01 1 1446 1 1446 NA NA 1 1446 #> 6847 TCGA-23-1022-01 1 1511 1 1511 1 450 1 450 #> 6848 TCGA-23-1023-01 0 1233 0 1233 1 490 1 490 #> 6849 TCGA-23-1024-01 0 468 0 468 NA NA 0 468 #> 6850 TCGA-23-1026-01 0 816 0 816 1 797 1 797 #> 6851 TCGA-23-1027-01 1 976 NA 976 NA NA 1 114 #> 6852 TCGA-23-1028-01 0 1503 0 1503 1 133 1 133 #> 6853 TCGA-23-1029-01 0 268 0 268 0 268 0 268 #> 6854 TCGA-23-1030-01 0 886 0 886 1 544 1 544 #> 6855 TCGA-23-1032-01 1 84 1 84 NA NA 1 84 #> 6856 TCGA-23-1107-01 1 9 1 9 NA NA 1 9 #> 6857 TCGA-23-1109-01 1 1562 1 1562 NA NA 1 987 #> 6858 TCGA-23-1110-01 0 1658 0 1658 1 326 1 326 #> 6859 TCGA-23-1111-01 0 98 0 98 NA NA 0 98 #> 6860 TCGA-23-1113-01 1 949 1 949 NA NA 1 949 #> 6861 TCGA-23-1114-01 1 2089 1 2089 1 634 1 634 #> 6862 TCGA-23-1116-01 1 592 1 592 1 286 1 286 #> 6863 TCGA-23-1118-01 0 2616 0 2616 0 2616 0 2616 #> 6864 TCGA-23-1119-01 0 3953 0 3953 1 3378 1 3378 #> 6865 TCGA-23-1120-01 0 130 0 130 0 130 0 130 #> 6866 TCGA-23-1122-01 1 1189 1 1189 1 447 1 447 #> 6867 TCGA-23-1123-01 1 1018 1 1018 NA NA 1 1018 #> 6868 TCGA-23-1809-01 0 16 0 16 NA NA 0 16 #> 6869 TCGA-23-2077-01 0 3525 0 3525 1 1232 1 1232 #> 6870 TCGA-23-2078-01 0 2661 0 2661 0 2661 0 2661 #> 6871 TCGA-23-2081-01 1 2342 1 2342 NA NA 1 2342 #> 6872 TCGA-23-2084-01 1 1516 1 1516 NA NA 1 619 #> 6873 TCGA-24-0966-01 0 232 0 232 NA NA 0 232 #> 6874 TCGA-24-0968-01 1 NA 1 NA NA NA 1 NA #> 6875 TCGA-24-0970-01 1 354 1 354 NA NA 1 280 #> 6876 TCGA-24-0975-01 1 663 1 663 NA NA 1 663 #> 6877 TCGA-24-0979-01 1 1264 1 1264 NA NA 1 428 #> 6878 TCGA-24-0982-01 1 679 1 679 1 153 1 153 #> 6879 TCGA-24-1103-01 1 1646 1 1646 1 678 1 678 #> 6880 TCGA-24-1104-01 1 1933 1 1933 NA NA 1 959 #> 6881 TCGA-24-1105-01 1 1442 1 1442 1 470 1 470 #> 6882 TCGA-24-1413-01 0 192 0 192 0 192 0 192 #> 6883 TCGA-24-1416-01 0 194 0 194 NA NA 0 194 #> 6884 TCGA-24-1417-01 0 238 0 238 NA NA 0 238 #> 6885 TCGA-24-1418-01 0 243 0 243 0 243 0 243 #> 6886 TCGA-24-1419-01 0 239 0 239 0 239 0 239 #> 6887 TCGA-24-1422-01 1 23 NA 23 NA NA 0 23 #> 6888 TCGA-24-1423-01 0 190 0 190 0 190 0 190 #> 6889 TCGA-24-1424-01 0 183 0 183 0 183 0 183 #> 6890 TCGA-24-1425-01 0 181 0 181 0 181 0 181 #> 6891 TCGA-24-1426-01 0 163 0 163 0 163 0 163 #> 6892 TCGA-24-1427-01 0 147 0 147 NA NA 0 147 #> 6893 TCGA-24-1428-01 0 529 0 529 1 448 1 448 #> 6894 TCGA-24-1430-01 1 863 1 863 1 449 1 449 #> 6895 TCGA-24-1431-01 1 567 1 567 NA NA 1 199 #> 6896 TCGA-24-1434-01 1 568 1 568 NA NA 1 337 #> 6897 TCGA-24-1435-01 1 1324 1 1324 1 505 1 505 #> 6898 TCGA-24-1436-01 1 260 1 260 NA NA 1 260 #> 6899 TCGA-24-1463-01 1 2218 1 2218 1 971 1 971 #> 6900 TCGA-24-1464-01 1 379 1 379 NA NA 1 323 #> 6901 TCGA-24-1467-01 1 3224 1 3224 1 1253 1 1253 #> 6902 TCGA-24-1469-01 0 277 0 277 0 277 0 277 #> 6903 TCGA-24-1470-01 0 105 0 105 0 105 0 105 #> 6904 TCGA-24-1471-01 0 36 0 36 NA NA 0 36 #> 6905 TCGA-24-1474-01 1 676 1 676 NA NA 1 332 #> 6906 TCGA-24-1544-01 1 820 1 820 NA NA 1 643 #> 6907 TCGA-24-1545-01 1 1746 1 1746 1 861 1 861 #> 6908 TCGA-24-1546-01 1 1955 NA 1955 NA NA 0 1955 #> 6909 TCGA-24-1548-01 1 493 1 493 1 207 1 207 #> 6910 TCGA-24-1549-01 1 1721 1 1721 1 1042 1 1042 #> 6911 TCGA-24-1550-01 1 1249 1 1249 1 892 1 892 #> 6912 TCGA-24-1551-01 1 1579 1 1579 1 764 1 764 #> 6913 TCGA-24-1552-01 1 1259 1 1259 1 403 1 403 #> 6914 TCGA-24-1553-01 1 1767 1 1767 1 553 1 553 #> 6915 TCGA-24-1555-01 1 2692 1 2692 1 1577 1 1577 #> 6916 TCGA-24-1556-01 1 2148 1 2148 1 539 1 539 #> 6917 TCGA-24-1557-01 1 1213 1 1213 NA NA 1 447 #> 6918 TCGA-24-1558-01 1 594 1 594 NA NA 1 273 #> 6919 TCGA-24-1560-01 1 1341 1 1341 1 143 1 143 #> 6920 TCGA-24-1562-01 1 1384 1 1384 1 229 1 229 #> 6921 TCGA-24-1563-01 1 1451 1 1451 1 396 1 396 #> 6922 TCGA-24-1564-01 1 787 1 787 1 221 1 221 #> 6923 TCGA-24-1565-01 1 312 1 312 NA NA 1 145 #> 6924 TCGA-24-1567-01 1 524 1 524 NA NA 1 319 #> 6925 TCGA-24-1603-01 1 2742 1 2742 1 992 1 992 #> 6926 TCGA-24-1604-01 1 2688 1 2688 NA NA 1 2688 #> 6927 TCGA-24-1616-01 1 1163 1 1163 1 405 1 405 #> 6928 TCGA-24-1842-01 0 253 0 253 0 253 0 253 #> 6929 TCGA-24-1843-01 0 106 0 106 0 106 0 106 #> 6930 TCGA-24-1844-01 0 113 0 113 NA NA 0 113 #> 6931 TCGA-24-1845-01 0 116 0 116 NA NA 0 116 #> 6932 TCGA-24-1846-01 0 133 0 133 NA NA 0 133 #> 6933 TCGA-24-1849-01 0 176 0 176 0 176 0 176 #> 6934 TCGA-24-1850-01 0 168 0 168 0 168 0 168 #> 6935 TCGA-24-1923-01 1 690 1 690 1 343 1 343 #> 6936 TCGA-24-1924-01 1 919 1 919 1 320 1 320 #> 6937 TCGA-24-1928-01 1 336 1 336 NA NA 1 70 #> 6938 TCGA-24-1930-01 1 2467 1 2467 1 544 1 544 #> 6939 TCGA-24-2019-01 0 148 0 148 NA NA 0 148 #> 6940 TCGA-24-2020-01 1 4624 1 4624 1 723 1 723 #> 6941 TCGA-24-2023-01 1 1364 1 1364 1 1069 1 1069 #> 6942 TCGA-24-2024-01 1 1769 1 1769 1 421 1 421 #> 6943 TCGA-24-2026-01 1 1059 NA 1059 NA NA 0 1059 #> 6944 TCGA-24-2027-01 1 3337 1 3337 NA NA 1 617 #> 6945 TCGA-24-2033-01 1 562 1 562 NA NA 1 351 #> 6946 TCGA-24-2035-01 1 857 1 857 NA NA 1 287 #> 6947 TCGA-24-2036-01 1 1947 1 1947 1 914 1 914 #> 6948 TCGA-24-2038-01 1 1354 1 1354 1 1169 1 1169 #> 6949 TCGA-24-2254-01 1 1736 1 1736 1 606 1 606 #> 6950 TCGA-24-2261-01 1 24 1 24 NA NA 1 24 #> 6951 TCGA-24-2262-01 1 11 1 11 NA NA 1 11 #> 6952 TCGA-24-2267-01 1 1446 1 1446 1 512 1 512 #> 6953 TCGA-24-2271-01 1 962 1 962 NA NA 1 827 #> 6954 TCGA-24-2280-01 0 2143 0 2143 1 535 1 535 #> 6955 TCGA-24-2281-01 0 1357 0 1357 0 1357 0 1357 #> 6956 TCGA-24-2288-01 1 25 1 25 NA NA 1 25 #> 6957 TCGA-24-2289-01 1 2049 1 2049 NA NA 1 568 #> 6958 TCGA-24-2290-01 1 1102 1 1102 1 324 1 324 #> 6959 TCGA-24-2293-01 1 506 NA 506 NA NA 0 506 #> 6960 TCGA-24-2297-01 1 1699 NA 1699 0 1699 0 1699 #> 6961 TCGA-24-2298-01 1 1620 1 1620 1 469 1 469 #> 6962 TCGA-25-1312-01 1 31 NA 31 NA NA 0 31 #> 6963 TCGA-25-1313-01 1 820 1 820 NA NA 1 394 #> 6964 TCGA-25-1314-01 1 1004 1 1004 NA NA 1 274 #> 6965 TCGA-25-1315-01 1 1583 1 1583 NA NA 1 153 #> 6966 TCGA-25-1316-01 1 1279 1 1279 NA NA 1 276 #> 6967 TCGA-25-1317-01 1 61 NA 61 NA NA 0 61 #> 6968 TCGA-25-1318-01 1 1064 1 1064 NA NA 1 185 #> 6969 TCGA-25-1319-01 1 1977 NA 1977 NA NA 1 730 #> 6970 TCGA-25-1320-01 1 1155 1 1155 NA NA 1 424 #> 6971 TCGA-25-1321-01 1 1033 1 1033 1 454 1 454 #> 6972 TCGA-25-1322-01 1 91 1 91 NA NA 1 91 #> 6973 TCGA-25-1323-01 1 395 1 395 1 365 1 365 #> 6974 TCGA-25-1324-01 1 1035 NA 1035 NA NA 0 1035 #> 6975 TCGA-25-1326-01 1 1249 1 1249 NA NA 1 396 #> 6976 TCGA-25-1328-01 1 2009 1 2009 NA NA 1 244 #> 6977 TCGA-25-1329-01 1 457 NA 457 NA NA 0 457 #> 6978 TCGA-25-1623-01 1 565 1 565 NA NA 1 342 #> 6979 TCGA-25-1625-01 1 840 1 840 NA NA 1 526 #> 6980 TCGA-25-1626-01 1 518 1 518 NA NA 1 318 #> 6981 TCGA-25-1627-01 1 394 NA 394 NA NA 0 394 #> 6982 TCGA-25-1628-01 1 627 1 627 NA NA 1 287 #> 6983 TCGA-25-1630-01 1 1162 NA 1162 0 1162 0 1162 #> 6984 TCGA-25-1631-01 1 9 0 9 NA NA 0 9 #> 6985 TCGA-25-1632-01 1 1799 1 1799 NA NA 1 537 #> 6986 TCGA-25-1633-01 1 1891 1 1891 1 616 1 616 #> 6987 TCGA-25-1634-01 1 1091 1 1091 1 380 1 380 #> 6988 TCGA-25-1635-01 1 1583 1 1583 1 614 1 614 #> 6989 TCGA-25-1870-01 1 455 1 455 NA NA 1 243 #> 6990 TCGA-25-1871-01 1 760 1 760 NA NA 1 230 #> 6991 TCGA-25-1877-01 1 730 1 730 1 549 1 549 #> 6992 TCGA-25-2042-01 1 396 1 396 NA NA 1 396 #> 6993 TCGA-25-2391-01 1 1492 0 1492 0 1492 0 1492 #> 6994 TCGA-25-2392-01 1 31 NA 31 NA NA 0 31 #> 6995 TCGA-25-2393-01 1 1157 1 1157 NA NA 1 305 #> 6996 TCGA-25-2396-01 1 92 NA 92 NA NA 0 92 #> 6997 TCGA-25-2397-01 1 365 NA 365 NA NA 0 365 #> 6998 TCGA-25-2398-01 1 1369 1 1369 1 577 1 577 #> 6999 TCGA-25-2399-01 1 608 1 608 NA NA 1 243 #> 7000 TCGA-25-2400-01 1 1278 1 1278 1 577 1 577 #> 7001 TCGA-25-2401-01 1 90 NA 90 NA NA 0 90 #> 7002 TCGA-25-2404-01 1 883 1 883 1 426 1 426 #> 7003 TCGA-25-2409-01 1 821 1 821 NA NA 1 304 #> 7004 TCGA-29-1688-01 1 2400 1 2400 NA NA 1 184 #> 7005 TCGA-29-1690-01 1 1448 1 1448 NA NA 1 1448 #> 7006 TCGA-29-1691-01 1 1470 1 1470 1 613 1 613 #> 7007 TCGA-29-1693-01 0 3096 0 3096 1 694 1 694 #> 7008 TCGA-29-1694-01 1 1187 1 1187 NA NA 1 1187 #> 7009 TCGA-29-1695-01 1 1229 NA 1229 NA NA 0 1229 #> 7010 TCGA-29-1696-01 1 1032 1 1032 NA NA 1 342 #> 7011 TCGA-29-1697-01 1 949 1 949 1 500 1 500 #> 7012 TCGA-29-1698-01 0 2078 0 2078 1 181 1 181 #> 7013 TCGA-29-1699-01 1 1106 NA 1106 NA NA 0 1106 #> 7014 TCGA-29-1701-01 1 515 1 515 NA NA 1 298 #> 7015 TCGA-29-1702-01 1 728 1 728 1 286 1 286 #> 7016 TCGA-29-1703-01 1 1815 1 1815 1 324 1 324 #> 7017 TCGA-29-1705-02 1 555 1 555 1 283 1 283 #> 7018 TCGA-29-1705-01 1 555 1 555 1 283 1 283 #> 7019 TCGA-29-1707-02 0 1277 0 1277 1 1201 1 1201 #> 7020 TCGA-29-1710-01 1 951 1 951 NA NA 1 315 #> 7021 TCGA-29-1711-01 0 1053 0 1053 0 1053 0 1053 #> 7022 TCGA-29-1761-01 1 528 1 528 NA NA 1 528 #> 7023 TCGA-29-1762-01 1 2634 1 2634 NA NA 1 1375 #> 7024 TCGA-29-1763-01 0 2032 0 2032 1 428 1 428 #> 7025 TCGA-29-1766-01 1 1199 1 1199 NA NA 1 672 #> 7026 TCGA-29-1768-01 1 952 1 952 NA NA 1 547 #> 7027 TCGA-29-1769-01 0 699 0 699 0 699 0 699 #> 7028 TCGA-29-1770-02 0 741 0 741 1 377 1 377 #> 7029 TCGA-29-1770-01 0 741 0 741 1 377 1 377 #> 7030 TCGA-29-1774-01 0 527 0 527 NA NA 1 234 #> 7031 TCGA-29-1776-01 0 360 0 360 NA NA 0 360 #> 7032 TCGA-29-1777-01 0 374 0 374 NA NA 0 374 #> 7033 TCGA-29-1778-01 0 454 0 454 0 454 0 454 #> 7034 TCGA-29-1781-01 0 255 0 255 0 255 0 255 #> 7035 TCGA-29-1783-01 0 220 0 220 NA NA 0 220 #> 7036 TCGA-29-1784-01 0 163 0 163 0 163 0 163 #> 7037 TCGA-29-1785-01 1 1104 NA 1104 1 473 1 473 #> 7038 TCGA-29-2414-02 1 2621 1 2621 1 552 1 552 #> 7039 TCGA-29-2414-01 1 2621 1 2621 1 552 1 552 #> 7040 TCGA-29-2425-01 0 1977 0 1977 1 1577 1 1577 #> 7041 TCGA-29-2427-01 0 1900 0 1900 1 1582 1 1582 #> 7042 TCGA-29-2428-01 0 1372 0 1372 0 1372 0 1372 #> 7043 TCGA-29-A5NZ-01 1 1088 1 1088 1 358 1 358 #> 7044 TCGA-30-1714-01 1 1158 1 1158 NA NA 1 241 #> 7045 TCGA-30-1718-01 1 1579 1 1579 NA NA 1 896 #> 7046 TCGA-30-1853-01 1 1103 1 1103 1 634 1 634 #> 7047 TCGA-30-1855-01 1 75 1 75 NA NA 1 75 #> 7048 TCGA-30-1857-01 1 8 1 8 NA NA 1 8 #> 7049 TCGA-30-1860-01 1 1366 1 1366 1 397 1 397 #> 7050 TCGA-30-1861-01 1 1058 NA 1058 NA NA 0 1058 #> 7051 TCGA-30-1862-01 1 186 1 186 NA NA 1 186 #> 7052 TCGA-30-1866-01 1 1114 1 1114 NA NA 1 285 #> 7053 TCGA-30-1891-01 1 914 1 914 NA NA 1 181 #> 7054 TCGA-30-1892-01 1 1484 1 1484 1 253 1 253 #> 7055 TCGA-31-1944-01 0 1386 0 1386 1 678 1 678 #> 7056 TCGA-31-1946-01 0 918 0 918 NA NA 1 664 #> 7057 TCGA-31-1950-01 0 571 0 571 NA NA 1 349 #> 7058 TCGA-31-1951-01 0 684 0 684 NA NA 1 659 #> 7059 TCGA-31-1953-01 0 204 0 204 NA NA 1 70 #> 7060 TCGA-31-1956-01 0 1342 0 1342 NA NA 0 1342 #> 7061 TCGA-31-1959-01 0 67 0 67 NA NA 0 67 #> 7062 TCGA-36-1568-01 0 875 0 875 NA NA 1 548 #> 7063 TCGA-36-1569-01 0 885 0 885 NA NA 0 885 #> 7064 TCGA-36-1570-01 0 655 0 655 NA NA 1 375 #> 7065 TCGA-36-1571-01 1 695 1 695 1 375 1 375 #> 7066 TCGA-36-1574-01 0 686 0 686 1 648 1 648 #> 7067 TCGA-36-1575-01 0 260 0 260 NA NA 0 260 #> 7068 TCGA-36-1576-01 0 915 0 915 1 817 1 817 #> 7069 TCGA-36-1577-01 0 783 0 783 0 783 0 783 #> 7070 TCGA-36-1578-01 0 847 0 847 NA NA 1 310 #> 7071 TCGA-36-1580-01 1 737 1 737 NA NA 1 440 #> 7072 TCGA-36-1581-01 0 751 0 751 1 702 1 702 #> 7073 TCGA-3P-A9WA-01 0 420 0 420 0 420 0 420 #> 7074 TCGA-57-1582-01 1 731 1 731 NA NA 1 731 #> 7075 TCGA-57-1583-01 1 346 1 346 NA NA 1 346 #> 7076 TCGA-57-1584-01 0 643 0 643 NA NA 1 530 #> 7077 TCGA-57-1585-01 1 53 1 53 NA NA 1 53 #> 7078 TCGA-57-1586-01 0 679 0 679 NA NA 1 259 #> 7079 TCGA-57-1993-01 0 763 0 763 NA NA 0 763 #> 7080 TCGA-57-1994-01 0 761 0 761 NA NA 0 761 #> 7081 TCGA-59-2348-01 0 5481 0 5481 0 5481 0 5481 #> 7082 TCGA-59-2350-01 1 679 1 679 NA NA 1 211 #> 7083 TCGA-59-2351-01 0 3532 0 3532 1 2139 1 2139 #> 7084 TCGA-59-2352-01 1 286 1 286 NA NA 1 286 #> 7085 TCGA-59-2354-01 1 1046 1 1046 NA NA 1 462 #> 7086 TCGA-59-2355-01 1 65 1 65 NA NA 1 65 #> 7087 TCGA-59-2363-01 0 165 0 165 0 165 0 165 #> 7088 TCGA-59-A5PD-01 1 624 1 624 1 145 1 145 #> 7089 TCGA-5X-AA5U-01 0 361 0 361 0 361 0 361 #> 7090 TCGA-61-1721-01 0 338 0 338 NA NA 0 338 #> 7091 TCGA-61-1724-01 1 637 1 637 NA NA 1 637 #> 7092 TCGA-61-1725-01 0 956 0 956 NA NA 1 844 #> 7093 TCGA-61-1728-01 0 848 0 848 NA NA 1 533 #> 7094 TCGA-61-1733-01 0 967 0 967 NA NA 1 175 #> 7095 TCGA-61-1736-01 1 1484 1 1484 1 764 1 764 #> 7096 TCGA-61-1737-01 0 1364 0 1364 NA NA 0 1364 #> 7097 TCGA-61-1738-01 1 1089 1 1089 NA NA 1 276 #> 7098 TCGA-61-1740-01 1 74 1 74 NA NA 1 74 #> 7099 TCGA-61-1741-01 1 1024 1 1024 1 488 1 488 #> 7100 TCGA-61-1743-01 1 1329 1 1329 1 809 1 809 #> 7101 TCGA-61-1900-01 0 176 0 176 NA NA 0 176 #> 7102 TCGA-61-1907-01 0 952 0 952 NA NA 1 743 #> 7103 TCGA-61-1910-01 0 1127 0 1127 0 1127 0 1127 #> 7104 TCGA-61-1911-01 0 1293 0 1293 1 844 1 844 #> 7105 TCGA-61-1914-01 0 1722 0 1722 1 1674 1 1674 #> 7106 TCGA-61-1917-01 1 1321 NA 1321 0 1321 0 1321 #> 7107 TCGA-61-1918-01 1 479 1 479 NA NA 1 413 #> 7108 TCGA-61-1919-01 1 1161 NA 1161 1 439 1 439 #> 7109 TCGA-61-1995-01 0 61 0 61 NA NA 0 61 #> 7110 TCGA-61-1998-01 0 168 0 168 NA NA 0 168 #> 7111 TCGA-61-2000-01 0 441 0 441 NA NA 1 339 #> 7112 TCGA-61-2002-01 0 547 0 547 NA NA 0 547 #> 7113 TCGA-61-2003-01 0 122 0 122 NA NA 0 122 #> 7114 TCGA-61-2008-02 0 932 0 932 1 818 1 818 #> 7115 TCGA-61-2008-01 0 932 0 932 1 818 1 818 #> 7116 TCGA-61-2009-01 0 1212 0 1212 1 101 1 101 #> 7117 TCGA-61-2012-01 0 932 0 932 NA NA 0 932 #> 7118 TCGA-61-2016-01 1 36 1 36 NA NA 1 36 #> 7119 TCGA-61-2088-01 0 145 0 145 NA NA 0 145 #> 7120 TCGA-61-2092-01 0 1573 0 1573 0 1573 0 1573 #> 7121 TCGA-61-2094-01 0 2182 0 2182 0 2182 0 2182 #> 7122 TCGA-61-2095-01 1 1875 1 1875 1 445 1 445 #> 7123 TCGA-61-2097-01 0 1844 0 1844 0 1844 0 1844 #> 7124 TCGA-61-2098-01 0 1993 0 1993 0 1993 0 1993 #> 7125 TCGA-61-2101-01 1 1688 1 1688 NA NA 1 1688 #> 7126 TCGA-61-2102-01 1 197 1 197 NA NA 1 197 #> 7127 TCGA-61-2104-01 0 2338 0 2338 1 1680 1 1680 #> 7128 TCGA-61-2109-01 1 629 1 629 NA NA 1 465 #> 7129 TCGA-61-2110-01 1 1354 1 1354 NA NA 1 213 #> 7130 TCGA-61-2111-01 0 3825 0 3825 NA NA 1 2205 #> 7131 TCGA-61-2113-01 1 676 NA 676 NA NA 1 291 #> 7132 TCGA-OY-A56P-01 0 1207 0 1207 1 794 1 794 #> 7133 TCGA-OY-A56Q-01 0 576 0 576 0 576 0 576 #> 7134 TCGA-VG-A8LO-01 1 24 1 24 NA NA 1 24 #> 7135 TCGA-WR-A838-01 1 304 1 304 NA NA 1 245 #> 7136 TCGA-2J-AAB1-01 1 66 1 66 0 66 0 66 #> 7137 TCGA-2J-AAB4-01 0 729 0 729 0 729 0 729 #> 7138 TCGA-2J-AAB6-01 1 293 1 293 NA NA 1 169 #> 7139 TCGA-2J-AAB8-01 0 80 0 80 NA NA 0 80 #> 7140 TCGA-2J-AAB9-01 1 627 1 627 1 521 1 521 #> 7141 TCGA-2J-AABA-01 1 607 1 607 NA NA 1 160 #> 7142 TCGA-2J-AABE-01 0 676 0 676 0 676 0 676 #> 7143 TCGA-2J-AABF-01 1 691 1 691 NA NA 1 443 #> 7144 TCGA-2J-AABH-01 0 1287 0 1287 1 1287 1 1287 #> 7145 TCGA-2J-AABI-01 0 969 0 969 NA NA 1 728 #> 7146 TCGA-2J-AABK-01 0 484 0 484 0 484 0 484 #> 7147 TCGA-2J-AABO-01 0 440 0 440 NA NA 1 439 #> 7148 TCGA-2J-AABP-01 0 463 0 463 0 463 0 463 #> 7149 TCGA-2J-AABR-01 0 438 0 438 NA NA 1 327 #> 7150 TCGA-2J-AABT-01 0 319 0 319 NA NA 0 319 #> 7151 TCGA-2J-AABU-01 1 277 1 277 NA NA 1 154 #> 7152 TCGA-2J-AABV-01 1 652 1 652 NA NA 1 126 #> 7153 TCGA-2L-AAQA-01 1 143 1 143 NA NA 1 143 #> 7154 TCGA-2L-AAQE-01 1 684 1 684 NA NA 1 684 #> 7155 TCGA-2L-AAQI-01 1 103 1 103 NA NA 1 103 #> 7156 TCGA-2L-AAQJ-01 1 394 1 394 NA NA 1 394 #> 7157 TCGA-2L-AAQL-01 1 292 1 292 NA NA 1 292 #> 7158 TCGA-2L-AAQM-01 0 1383 0 1383 NA NA 0 1383 #> 7159 TCGA-3A-A9I5-01 0 1794 0 1794 0 1794 0 1794 #> 7160 TCGA-3A-A9I7-01 0 1323 0 1323 NA NA 1 1309 #> 7161 TCGA-3A-A9I9-01 1 634 1 634 NA NA 1 513 #> 7162 TCGA-3A-A9IB-01 1 224 NA 224 NA NA 0 224 #> 7163 TCGA-3A-A9IC-01 1 738 1 738 NA NA 1 738 #> 7164 TCGA-3A-A9IH-01 0 1021 0 1021 NA NA 1 763 #> 7165 TCGA-3A-A9IJ-01 0 1854 0 1854 0 1854 0 1854 #> 7166 TCGA-3A-A9IL-01 0 2741 0 2741 NA NA 0 2741 #> 7167 TCGA-3A-A9IN-01 0 2084 0 2084 0 2084 0 2084 #> 7168 TCGA-3A-A9IO-01 0 1942 0 1942 NA NA 0 1942 #> 7169 TCGA-3A-A9IR-01 0 1542 0 1542 0 1542 0 1542 #> 7170 TCGA-3A-A9IS-01 0 998 0 998 0 998 0 998 #> 7171 TCGA-3A-A9IU-01 1 458 1 458 NA NA 1 371 #> 7172 TCGA-3A-A9IV-01 0 1103 0 1103 0 1103 0 1103 #> 7173 TCGA-3A-A9IX-01 0 1037 0 1037 0 1037 0 1037 #> 7174 TCGA-3A-A9IZ-01 1 308 1 308 NA NA 1 109 #> 7175 TCGA-3A-A9J0-01 0 743 0 743 NA NA 1 363 #> 7176 TCGA-3E-AAAY-01 0 2285 0 2285 1 987 1 987 #> 7177 TCGA-3E-AAAZ-01 1 2182 0 2182 NA NA 1 1600 #> 7178 TCGA-F2-6879-01 1 334 1 334 1 183 1 183 #> 7179 TCGA-F2-6880-01 0 295 0 295 0 295 0 295 #> 7180 TCGA-F2-7273-01 1 592 1 592 NA NA 1 256 #> 7181 TCGA-F2-7276-01 1 216 1 216 NA NA 1 216 #> 7182 TCGA-F2-A44G-01 1 233 1 233 1 214 1 214 #> 7183 TCGA-F2-A44H-01 0 586 0 586 0 586 0 586 #> 7184 TCGA-F2-A7TX-01 1 95 1 95 NA NA 1 95 #> 7185 TCGA-F2-A8YN-01 0 517 0 517 NA NA 0 517 #> 7186 TCGA-FB-A4P5-01 1 179 1 179 NA NA 1 179 #> 7187 TCGA-FB-A4P6-01 0 767 0 767 1 620 1 620 #> 7188 TCGA-FB-A545-01 1 732 1 732 1 378 1 378 #> 7189 TCGA-FB-A5VM-01 1 498 1 498 NA NA 1 177 #> 7190 TCGA-FB-A78T-01 1 375 1 375 0 375 0 375 #> 7191 TCGA-FB-A7DR-01 1 353 1 353 0 353 0 353 #> 7192 TCGA-FB-AAPP-01 1 485 1 485 NA NA 1 150 #> 7193 TCGA-FB-AAPQ-01 1 1130 NA 1130 NA NA 0 1130 #> 7194 TCGA-FB-AAPS-01 0 228 0 228 NA NA 0 228 #> 7195 TCGA-FB-AAPU-01 1 381 1 381 NA NA 1 381 #> 7196 TCGA-FB-AAPY-01 1 1059 0 1059 0 1059 0 1059 #> 7197 TCGA-FB-AAPZ-01 0 716 0 716 1 716 1 716 #> 7198 TCGA-FB-AAQ0-01 1 473 0 473 0 473 0 473 #> 7199 TCGA-FB-AAQ1-01 1 123 1 123 NA NA 1 123 #> 7200 TCGA-FB-AAQ2-01 1 153 1 153 NA NA 1 92 #> 7201 TCGA-FB-AAQ3-01 1 31 0 31 0 31 0 31 #> 7202 TCGA-FB-AAQ6-01 1 244 1 244 NA NA 1 213 #> 7203 TCGA-H6-8124-01 0 392 0 392 1 259 1 259 #> 7204 TCGA-H6-8124-11 0 392 0 392 1 259 1 259 #> 7205 TCGA-H6-A45N-01 1 421 1 421 NA NA 1 363 #> 7206 TCGA-H6-A45N-11 1 421 1 421 NA NA 1 363 #> 7207 TCGA-H8-A6C1-01 0 671 0 671 NA NA 1 455 #> 7208 TCGA-HV-A5A3-01 1 128 0 128 0 128 0 128 #> 7209 TCGA-HV-A5A3-11 1 128 0 128 0 128 0 128 #> 7210 TCGA-HV-A5A4-01 0 232 0 232 0 232 0 232 #> 7211 TCGA-HV-A5A5-01 0 289 0 289 0 289 0 289 #> 7212 TCGA-HV-A5A6-01 1 2036 0 2036 1 1511 1 1511 #> 7213 TCGA-HV-A7OL-01 0 252 0 252 NA NA 1 123 #> 7214 TCGA-HV-A7OP-01 0 978 0 978 NA NA 1 342 #> 7215 TCGA-HV-AA8V-01 0 920 0 920 NA NA 1 526 #> 7216 TCGA-HV-AA8X-01 1 532 1 532 NA NA 1 375 #> 7217 TCGA-HZ-7289-01 1 661 1 661 NA NA 1 228 #> 7218 TCGA-HZ-7918-01 0 969 0 969 1 542 1 542 #> 7219 TCGA-HZ-7919-01 1 593 1 593 NA NA 1 593 #> 7220 TCGA-HZ-7920-01 1 236 0 236 0 236 0 236 #> 7221 TCGA-HZ-7922-01 0 4 0 4 NA NA 0 4 #> 7222 TCGA-HZ-7923-01 0 314 0 314 0 314 0 314 #> 7223 TCGA-HZ-7924-01 0 840 0 840 1 831 1 831 #> 7224 TCGA-HZ-7925-01 1 614 1 614 1 364 1 364 #> 7225 TCGA-HZ-7926-01 1 518 1 518 NA NA 1 340 #> 7226 TCGA-HZ-8001-01 0 706 0 706 0 706 0 706 #> 7227 TCGA-HZ-8002-01 1 366 1 366 NA NA 1 366 #> 7228 TCGA-HZ-8003-01 1 596 1 596 NA NA 1 596 #> 7229 TCGA-HZ-8005-01 1 120 1 120 NA NA 1 120 #> 7230 TCGA-HZ-8315-01 1 299 1 299 NA NA 1 299 #> 7231 TCGA-HZ-8317-01 1 378 1 378 NA NA 1 378 #> 7232 TCGA-HZ-8519-01 0 454 0 454 0 454 0 454 #> 7233 TCGA-HZ-8636-01 1 545 1 545 NA NA 1 545 #> 7234 TCGA-HZ-8637-01 1 517 0 517 0 517 0 517 #> 7235 TCGA-HZ-8638-01 1 151 0 151 0 151 0 151 #> 7236 TCGA-HZ-A49G-01 0 660 0 660 NA NA 0 660 #> 7237 TCGA-HZ-A49H-01 0 491 0 491 0 491 0 491 #> 7238 TCGA-HZ-A49I-01 1 308 1 308 NA NA 1 308 #> 7239 TCGA-HZ-A4BH-01 0 194 0 194 NA NA 0 194 #> 7240 TCGA-HZ-A4BK-01 0 657 0 657 NA NA 0 657 #> 7241 TCGA-HZ-A77O-01 1 160 1 160 1 98 1 98 #> 7242 TCGA-HZ-A77P-01 0 330 0 330 0 330 0 330 #> 7243 TCGA-HZ-A77Q-01 0 33 0 33 NA NA 0 33 #> 7244 TCGA-HZ-A8P0-01 0 0 0 0 NA NA 0 0 #> 7245 TCGA-HZ-A8P1-01 0 7 0 7 NA NA 0 7 #> 7246 TCGA-HZ-A9TJ-06 0 603 0 603 NA NA 1 555 #> 7247 TCGA-HZ-A9TJ-01 0 603 0 603 NA NA 1 555 #> 7248 TCGA-IB-7644-01 1 394 1 394 NA NA 1 306 #> 7249 TCGA-IB-7645-01 1 1502 1 1502 NA NA 1 984 #> 7250 TCGA-IB-7646-01 1 145 1 145 NA NA 1 132 #> 7251 TCGA-IB-7647-01 1 666 1 666 NA NA 1 390 #> 7252 TCGA-IB-7649-01 1 467 NA 467 NA NA 1 282 #> 7253 TCGA-IB-7651-01 1 603 1 603 1 492 1 492 #> 7254 TCGA-IB-7652-01 0 1116 0 1116 0 1116 0 1116 #> 7255 TCGA-IB-7654-01 1 476 0 476 NA NA 1 476 #> 7256 TCGA-IB-7885-01 0 1257 0 1257 0 1257 0 1257 #> 7257 TCGA-IB-7886-01 1 123 0 123 0 123 0 123 #> 7258 TCGA-IB-7887-01 1 110 1 110 NA NA 0 110 #> 7259 TCGA-IB-7888-01 1 1332 1 1332 NA NA 1 427 #> 7260 TCGA-IB-7889-01 1 481 1 481 NA NA 1 352 #> 7261 TCGA-IB-7890-01 1 598 1 598 NA NA 1 519 #> 7262 TCGA-IB-7891-01 1 913 1 913 1 525 1 525 #> 7263 TCGA-IB-7893-01 1 117 1 117 NA NA 1 80 #> 7264 TCGA-IB-7897-01 1 486 1 486 NA NA 1 397 #> 7265 TCGA-IB-8126-01 0 462 0 462 NA NA 1 83 #> 7266 TCGA-IB-8127-01 0 522 0 522 1 486 1 486 #> 7267 TCGA-IB-A5SO-01 1 365 1 365 NA NA 1 276 #> 7268 TCGA-IB-A5SP-01 0 482 0 482 NA NA 1 300 #> 7269 TCGA-IB-A5SQ-01 1 219 1 219 1 197 1 197 #> 7270 TCGA-IB-A5SS-01 1 460 1 460 1 66 1 66 #> 7271 TCGA-IB-A5ST-01 0 635 0 635 0 635 0 635 #> 7272 TCGA-IB-A6UF-01 0 666 0 666 NA NA 1 593 #> 7273 TCGA-IB-A6UG-01 1 41 0 41 NA NA 1 41 #> 7274 TCGA-IB-A7LX-01 1 250 1 250 NA NA 1 7 #> 7275 TCGA-IB-A7M4-01 0 483 0 483 0 483 0 483 #> 7276 TCGA-IB-AAUM-01 0 8 0 8 NA NA 0 8 #> 7277 TCGA-IB-AAUN-01 1 144 NA 144 1 131 1 131 #> 7278 TCGA-IB-AAUO-01 1 239 1 239 NA NA 1 74 #> 7279 TCGA-IB-AAUP-01 0 431 0 431 0 431 0 431 #> 7280 TCGA-IB-AAUQ-01 1 183 1 183 NA NA 1 107 #> 7281 TCGA-IB-AAUR-01 0 338 0 338 NA NA 1 318 #> 7282 TCGA-IB-AAUS-01 0 225 0 225 NA NA 0 225 #> 7283 TCGA-IB-AAUT-01 0 287 0 287 0 287 0 287 #> 7284 TCGA-IB-AAUU-01 0 245 0 245 0 245 0 245 #> 7285 TCGA-IB-AAUV-01 0 404 0 404 0 404 0 404 #> 7286 TCGA-IB-AAUW-01 1 230 1 230 1 185 1 185 #> 7287 TCGA-L1-A7W4-01 1 278 1 278 NA NA 1 129 #> 7288 TCGA-LB-A7SX-01 1 393 0 393 NA NA 0 393 #> 7289 TCGA-LB-A8F3-01 0 379 0 379 NA NA 0 379 #> 7290 TCGA-LB-A9Q5-01 1 313 1 313 NA NA 1 290 #> 7291 TCGA-M8-A5N4-01 0 584 0 584 NA NA 1 416 #> 7292 TCGA-OE-A75W-01 1 267 NA 267 NA NA 1 146 #> 7293 TCGA-PZ-A5RE-01 1 470 1 470 NA NA 1 393 #> 7294 TCGA-Q3-A5QY-01 0 416 0 416 NA NA 0 416 #> 7295 TCGA-Q3-AA2A-01 0 95 0 95 NA NA 0 95 #> 7296 TCGA-RB-A7B8-01 1 466 1 466 1 449 1 449 #> 7297 TCGA-RB-AA9M-01 0 286 0 286 NA NA 1 258 #> 7298 TCGA-RL-AAAS-01 0 9 0 9 0 9 0 9 #> 7299 TCGA-S4-A8RM-01 0 737 0 737 0 737 0 737 #> 7300 TCGA-S4-A8RO-01 0 525 0 525 1 291 1 291 #> 7301 TCGA-S4-A8RP-01 1 702 NA 702 NA NA 0 702 #> 7302 TCGA-US-A774-01 1 695 1 695 NA NA 1 366 #> 7303 TCGA-US-A776-01 0 1216 0 1216 0 1216 0 1216 #> 7304 TCGA-US-A779-01 1 511 1 511 NA NA 1 511 #> 7305 TCGA-US-A77E-01 1 430 1 430 NA NA 1 166 #> 7306 TCGA-US-A77G-01 1 12 0 12 NA NA 0 12 #> 7307 TCGA-US-A77J-01 1 568 1 568 NA NA 1 568 #> 7308 TCGA-XD-AAUG-01 0 420 0 420 NA NA 0 420 #> 7309 TCGA-XD-AAUH-01 0 395 0 395 NA NA 1 87 #> 7310 TCGA-XD-AAUI-01 1 366 1 366 NA NA 1 175 #> 7311 TCGA-XD-AAUL-01 0 498 0 498 0 498 0 498 #> 7312 TCGA-XN-A8T3-01 0 951 0 951 NA NA 0 951 #> 7313 TCGA-XN-A8T5-01 0 720 0 720 NA NA 1 242 #> 7314 TCGA-YB-A89D-01 0 350 0 350 0 350 0 350 #> 7315 TCGA-YB-A89D-11 0 350 0 350 0 350 0 350 #> 7316 TCGA-YH-A8SY-01 0 388 0 388 NA NA 0 388 #> 7317 TCGA-YY-A8LH-01 0 2016 0 2016 0 2016 0 2016 #> 7318 TCGA-Z5-AAPL-01 0 467 0 467 0 467 0 467 #> 7319 TCGA-P7-A5NX-01 0 818 0 818 0 818 0 818 #> 7320 TCGA-P7-A5NY-05 0 957 0 957 0 957 0 957 #> 7321 TCGA-P7-A5NY-01 0 957 0 957 0 957 0 957 #> 7322 TCGA-P8-A5KC-01 0 883 0 883 0 883 0 883 #> 7323 TCGA-P8-A5KC-11 0 883 0 883 0 883 0 883 #> 7324 TCGA-P8-A5KD-01 0 123 0 123 NA NA 0 123 #> 7325 TCGA-P8-A5KD-11 0 123 0 123 NA NA 0 123 #> 7326 TCGA-P8-A6RX-01 0 540 0 540 NA NA 0 540 #> 7327 TCGA-P8-A6RY-01 0 179 0 179 NA NA 0 179 #> 7328 TCGA-PR-A5PF-01 0 546 0 546 0 546 0 546 #> 7329 TCGA-PR-A5PG-01 0 2485 0 2485 1 2278 1 2278 #> 7330 TCGA-PR-A5PH-01 0 854 0 854 0 854 0 854 #> 7331 TCGA-QR-A6GO-01 0 1065 0 1065 0 1065 0 1065 #> 7332 TCGA-QR-A6GR-01 0 703 0 703 0 703 0 703 #> 7333 TCGA-QR-A6GS-01 0 38 0 38 0 38 0 38 #> 7334 TCGA-QR-A6GT-01 0 4185 0 4185 NA NA 1 1476 #> 7335 TCGA-QR-A6GU-01 0 1791 0 1791 0 1791 0 1791 #> 7336 TCGA-QR-A6GW-01 0 491 0 491 0 491 0 491 #> 7337 TCGA-QR-A6GX-01 0 579 0 579 0 579 0 579 #> 7338 TCGA-QR-A6GY-01 0 32 0 32 0 32 0 32 #> 7339 TCGA-QR-A6GZ-05 0 928 0 928 0 928 0 928 #> 7340 TCGA-QR-A6GZ-01 0 928 0 928 0 928 0 928 #> 7341 TCGA-QR-A6H0-01 0 280 0 280 0 280 0 280 #> 7342 TCGA-QR-A6H1-01 0 431 0 431 0 431 0 431 #> 7343 TCGA-QR-A6H2-01 0 302 0 302 0 302 0 302 #> 7344 TCGA-QR-A6H3-01 0 434 0 434 0 434 0 434 #> 7345 TCGA-QR-A6H4-01 0 2661 0 2661 0 2661 0 2661 #> 7346 TCGA-QR-A6H5-01 0 959 0 959 0 959 0 959 #> 7347 TCGA-QR-A6H6-01 0 474 0 474 0 474 0 474 #> 7348 TCGA-QR-A6ZZ-01 0 48 0 48 0 48 0 48 #> 7349 TCGA-QR-A700-01 0 978 0 978 NA NA 1 606 #> 7350 TCGA-QR-A702-01 0 39 0 39 0 39 0 39 #> 7351 TCGA-QR-A703-01 0 1167 0 1167 0 1167 1 0 #> 7352 TCGA-QR-A705-01 0 317 0 317 0 317 0 317 #> 7353 TCGA-QR-A706-01 0 125 0 125 0 125 0 125 #> 7354 TCGA-QR-A707-01 0 398 0 398 0 398 0 398 #> 7355 TCGA-QR-A708-01 0 35 0 35 0 35 0 35 #> 7356 TCGA-QR-A70A-01 0 2119 0 2119 0 2119 0 2119 #> 7357 TCGA-QR-A70C-01 0 3534 0 3534 0 3534 0 3534 #> 7358 TCGA-QR-A70D-01 0 7 0 7 0 7 0 7 #> 7359 TCGA-QR-A70E-01 0 192 0 192 0 192 0 192 #> 7360 TCGA-QR-A70H-01 0 816 0 816 0 816 0 816 #> 7361 TCGA-QR-A70I-01 0 910 0 910 0 910 0 910 #> 7362 TCGA-QR-A70J-01 0 399 0 399 0 399 0 399 #> 7363 TCGA-QR-A70K-01 0 274 0 274 0 274 0 274 #> 7364 TCGA-QR-A70M-01 0 1034 0 1034 0 1034 0 1034 #> 7365 TCGA-QR-A70N-01 0 43 0 43 0 43 0 43 #> 7366 TCGA-QR-A70P-01 1 3563 1 3563 NA NA 1 648 #> 7367 TCGA-QR-A70Q-01 0 140 0 140 0 140 0 140 #> 7368 TCGA-QR-A70R-01 0 432 0 432 0 432 0 432 #> 7369 TCGA-QR-A70T-01 0 267 0 267 0 267 0 267 #> 7370 TCGA-QR-A70U-01 0 1473 0 1473 0 1473 0 1473 #> 7371 TCGA-QR-A70V-01 0 2 0 2 0 2 0 2 #> 7372 TCGA-QR-A70W-01 0 1271 0 1271 0 1271 0 1271 #> 7373 TCGA-QR-A70X-01 0 183 0 183 0 183 0 183 #> 7374 TCGA-QR-A7IN-01 0 377 0 377 0 377 0 377 #> 7375 TCGA-QR-A7IP-01 0 546 0 546 0 546 0 546 #> 7376 TCGA-QT-A5XJ-01 0 1102 0 1102 NA NA 1 77 #> 7377 TCGA-QT-A5XK-01 0 211 0 211 0 211 0 211 #> 7378 TCGA-QT-A5XL-01 0 55 0 55 0 55 0 55 #> 7379 TCGA-QT-A5XM-01 0 22 0 22 0 22 0 22 #> 7380 TCGA-QT-A5XN-01 0 766 0 766 0 766 0 766 #> 7381 TCGA-QT-A5XO-01 0 70 0 70 0 70 0 70 #> 7382 TCGA-QT-A5XP-01 0 134 0 134 0 134 0 134 #> 7383 TCGA-QT-A69Q-01 0 24 0 24 0 24 0 24 #> 7384 TCGA-QT-A7U0-01 0 398 0 398 0 398 0 398 #> 7385 TCGA-RM-A68T-01 0 2372 0 2372 0 2372 0 2372 #> 7386 TCGA-RM-A68W-01 0 28 0 28 0 28 0 28 #> 7387 TCGA-RT-A6Y9-01 0 3293 0 3293 0 3293 1 3282 #> 7388 TCGA-RT-A6YA-01 0 1540 0 1540 0 1540 0 1540 #> 7389 TCGA-RT-A6YC-01 0 246 0 246 0 246 0 246 #> 7390 TCGA-RW-A67V-01 0 2643 0 2643 NA NA 1 551 #> 7391 TCGA-RW-A67W-01 0 604 0 604 0 604 0 604 #> 7392 TCGA-RW-A67X-01 0 89 0 89 0 89 0 89 #> 7393 TCGA-RW-A67Y-01 0 216 0 216 0 216 0 216 #> 7394 TCGA-RW-A680-01 0 1449 0 1449 0 1449 0 1449 #> 7395 TCGA-RW-A681-01 0 1141 0 1141 0 1141 0 1141 #> 7396 TCGA-RW-A684-01 0 32 0 32 0 32 0 32 #> 7397 TCGA-RW-A685-01 0 26 0 26 0 26 0 26 #> 7398 TCGA-RW-A686-06 0 587 0 587 0 587 0 587 #> 7399 TCGA-RW-A686-01 0 587 0 587 0 587 0 587 #> 7400 TCGA-RW-A688-01 0 37 0 37 0 37 1 27 #> 7401 TCGA-RW-A689-01 0 828 0 828 0 828 0 828 #> 7402 TCGA-RW-A68A-01 0 762 0 762 0 762 0 762 #> 7403 TCGA-RW-A68B-01 0 727 0 727 0 727 0 727 #> 7404 TCGA-RW-A68C-01 0 191 0 191 0 191 0 191 #> 7405 TCGA-RW-A68D-01 0 2214 0 2214 0 2214 0 2214 #> 7406 TCGA-RW-A68F-01 0 1354 0 1354 0 1354 0 1354 #> 7407 TCGA-RW-A68G-01 0 1274 0 1274 0 1274 0 1274 #> 7408 TCGA-RW-A7CZ-01 0 422 0 422 0 422 0 422 #> 7409 TCGA-RW-A7D0-01 0 352 0 352 0 352 0 352 #> 7410 TCGA-RW-A8AZ-01 1 88 0 88 NA NA 0 88 #> 7411 TCGA-RX-A8JQ-01 0 611 0 611 0 611 0 611 #> 7412 TCGA-S7-A7WL-01 0 961 0 961 0 961 0 961 #> 7413 TCGA-S7-A7WM-01 0 1112 0 1112 0 1112 0 1112 #> 7414 TCGA-S7-A7WN-01 0 1133 0 1133 0 1133 0 1133 #> 7415 TCGA-S7-A7WO-01 0 1080 0 1080 0 1080 0 1080 #> 7416 TCGA-S7-A7WP-01 0 944 0 944 0 944 0 944 #> 7417 TCGA-S7-A7WQ-01 0 820 0 820 0 820 0 820 #> 7418 TCGA-S7-A7WR-01 0 1238 0 1238 0 1238 0 1238 #> 7419 TCGA-S7-A7WT-01 0 1301 0 1301 0 1301 0 1301 #> 7420 TCGA-S7-A7WU-01 0 928 0 928 0 928 0 928 #> 7421 TCGA-S7-A7WV-01 0 849 0 849 0 849 0 849 #> 7422 TCGA-S7-A7WW-01 0 706 0 706 0 706 0 706 #> 7423 TCGA-S7-A7WX-01 0 770 0 770 0 770 0 770 #> 7424 TCGA-S7-A7X0-01 0 546 0 546 0 546 0 546 #> 7425 TCGA-S7-A7X1-01 0 576 0 576 0 576 0 576 #> 7426 TCGA-S7-A7X2-01 0 736 0 736 0 736 0 736 #> 7427 TCGA-SA-A6C2-01 0 296 0 296 0 296 0 296 #> 7428 TCGA-SP-A6QC-01 0 3491 0 3491 0 3491 0 3491 #> 7429 TCGA-SP-A6QD-01 0 3323 0 3323 0 3323 0 3323 #> 7430 TCGA-SP-A6QF-01 0 2513 0 2513 0 2513 1 588 #> 7431 TCGA-SP-A6QG-01 0 2417 0 2417 0 2417 1 626 #> 7432 TCGA-SP-A6QH-01 0 2203 0 2203 0 2203 0 2203 #> 7433 TCGA-SP-A6QI-01 0 3347 0 3347 0 3347 0 3347 #> 7434 TCGA-SP-A6QJ-01 0 472 0 472 0 472 0 472 #> 7435 TCGA-SP-A6QK-01 0 3384 0 3384 0 3384 0 3384 #> 7436 TCGA-SQ-A6I4-01 0 43 0 43 NA NA 0 43 #> 7437 TCGA-SQ-A6I4-11 0 43 0 43 NA NA 0 43 #> 7438 TCGA-SQ-A6I6-01 0 3 0 3 NA NA 0 3 #> 7439 TCGA-SR-A6MP-01 0 1558 0 1558 0 1558 0 1558 #> 7440 TCGA-SR-A6MQ-01 0 2087 0 2087 0 2087 0 2087 #> 7441 TCGA-SR-A6MR-01 0 2409 0 2409 NA NA 1 928 #> 7442 TCGA-SR-A6MS-01 0 2492 0 2492 0 2492 0 2492 #> 7443 TCGA-SR-A6MT-01 0 3247 0 3247 0 3247 0 3247 #> 7444 TCGA-SR-A6MU-01 0 3362 0 3362 0 3362 0 3362 #> 7445 TCGA-SR-A6MV-01 0 3682 0 3682 NA NA 0 3682 #> 7446 TCGA-SR-A6MX-06 1 95 1 95 NA NA 1 95 #> 7447 TCGA-SR-A6MX-05 1 95 1 95 NA NA 1 95 #> 7448 TCGA-SR-A6MX-01 1 95 1 95 NA NA 1 95 #> 7449 TCGA-SR-A6MY-01 0 750 0 750 0 750 0 750 #> 7450 TCGA-SR-A6MZ-01 0 797 0 797 0 797 0 797 #> 7451 TCGA-SR-A6N0-01 0 1509 0 1509 0 1509 0 1509 #> 7452 TCGA-TT-A6YJ-01 0 132 0 132 0 132 0 132 #> 7453 TCGA-TT-A6YK-01 0 1136 0 1136 0 1136 0 1136 #> 7454 TCGA-TT-A6YN-01 0 606 0 606 0 606 0 606 #> 7455 TCGA-TT-A6YO-01 0 405 0 405 1 377 1 377 #> 7456 TCGA-TT-A6YP-01 0 1292 0 1292 0 1292 0 1292 #> 7457 TCGA-W2-A7H5-01 0 611 0 611 0 611 0 611 #> 7458 TCGA-W2-A7H7-01 0 522 0 522 0 522 0 522 #> 7459 TCGA-W2-A7HA-01 0 36 0 36 0 36 0 36 #> 7460 TCGA-W2-A7HB-01 0 604 0 604 0 604 0 604 #> 7461 TCGA-W2-A7HC-01 0 439 0 439 0 439 0 439 #> 7462 TCGA-W2-A7HD-01 0 561 0 561 0 561 0 561 #> 7463 TCGA-W2-A7HE-01 0 505 0 505 0 505 0 505 #> 7464 TCGA-W2-A7HF-01 0 538 0 538 0 538 0 538 #> 7465 TCGA-W2-A7HH-01 0 779 0 779 0 779 0 779 #> 7466 TCGA-W2-A7UY-01 0 450 0 450 NA NA 0 450 #> 7467 TCGA-WB-A80K-01 0 1255 0 1255 1 772 1 772 #> 7468 TCGA-WB-A80L-01 0 1042 0 1042 0 1042 0 1042 #> 7469 TCGA-WB-A80M-01 0 136 0 136 0 136 0 136 #> 7470 TCGA-WB-A80N-01 0 144 0 144 0 144 0 144 #> 7471 TCGA-WB-A80O-01 0 776 0 776 0 776 0 776 #> 7472 TCGA-WB-A80P-01 0 9634 0 9634 NA NA 1 6866 #> 7473 TCGA-WB-A80Q-01 0 3880 0 3880 0 3880 0 3880 #> 7474 TCGA-WB-A80V-01 0 887 0 887 0 887 0 887 #> 7475 TCGA-WB-A80Y-01 1 596 0 596 0 596 0 596 #> 7476 TCGA-WB-A814-01 0 2252 0 2252 0 2252 0 2252 #> 7477 TCGA-WB-A815-01 0 1630 0 1630 0 1630 0 1630 #> 7478 TCGA-WB-A816-01 0 1254 0 1254 0 1254 0 1254 #> 7479 TCGA-WB-A817-01 0 1310 0 1310 0 1310 0 1310 #> 7480 TCGA-WB-A818-01 0 1288 0 1288 0 1288 0 1288 #> 7481 TCGA-WB-A819-01 0 1031 0 1031 0 1031 0 1031 #> 7482 TCGA-WB-A81A-01 0 735 0 735 0 735 0 735 #> 7483 TCGA-WB-A81D-01 0 1090 0 1090 0 1090 0 1090 #> 7484 TCGA-WB-A81E-01 0 1476 0 1476 1 887 1 887 #> 7485 TCGA-WB-A81F-01 0 1737 0 1737 0 1737 0 1737 #> 7486 TCGA-WB-A81G-01 0 1179 0 1179 0 1179 0 1179 #> 7487 TCGA-WB-A81H-01 0 1946 0 1946 0 1946 0 1946 #> 7488 TCGA-WB-A81I-01 0 679 0 679 0 679 0 679 #> 7489 TCGA-WB-A81J-01 0 741 0 741 0 741 0 741 #> 7490 TCGA-WB-A81K-01 0 1218 0 1218 0 1218 0 1218 #> 7491 TCGA-WB-A81M-01 0 1394 0 1394 0 1394 0 1394 #> 7492 TCGA-WB-A81N-01 0 1887 0 1887 0 1887 0 1887 #> 7493 TCGA-WB-A81P-01 0 395 0 395 0 395 0 395 #> 7494 TCGA-WB-A81Q-01 1 755 1 755 NA NA 1 755 #> 7495 TCGA-WB-A81R-01 0 49 0 49 0 49 0 49 #> 7496 TCGA-WB-A81S-01 0 723 0 723 0 723 0 723 #> 7497 TCGA-WB-A81T-01 0 776 0 776 0 776 0 776 #> 7498 TCGA-WB-A81V-01 0 2161 0 2161 0 2161 0 2161 #> 7499 TCGA-WB-A81W-01 0 2379 0 2379 0 2379 0 2379 #> 7500 TCGA-WB-A820-01 1 309 1 309 NA NA 1 309 #> 7501 TCGA-WB-A821-01 0 2832 0 2832 0 2832 0 2832 #> 7502 TCGA-WB-A822-01 0 3138 0 3138 NA NA 1 69 #> 7503 TCGA-XG-A823-01 0 614 0 614 0 614 1 190 #> 7504 TCGA-2A-A8VL-01 0 621 0 621 NA NA 0 621 #> 7505 TCGA-2A-A8VO-01 0 1701 0 1701 NA NA 0 1701 #> 7506 TCGA-2A-A8VT-01 0 1373 0 1373 NA NA 0 1373 #> 7507 TCGA-2A-A8VV-01 0 671 0 671 NA NA 0 671 #> 7508 TCGA-2A-A8VX-01 0 1378 0 1378 NA NA 0 1378 #> 7509 TCGA-2A-A8W1-01 0 112 0 112 NA NA 0 112 #> 7510 TCGA-2A-A8W3-01 0 863 0 863 NA NA 1 198 #> 7511 TCGA-2A-AAYF-01 0 1364 0 1364 0 1364 0 1364 #> 7512 TCGA-2A-AAYO-01 0 1272 0 1272 0 1272 0 1272 #> 7513 TCGA-2A-AAYU-01 0 615 0 615 NA NA 0 615 #> 7514 TCGA-4L-AA1F-01 0 350 0 350 0 350 0 350 #> 7515 TCGA-CH-5737-01 0 91 0 91 NA NA 0 91 #> 7516 TCGA-CH-5738-01 0 212 0 212 0 212 0 212 #> 7517 TCGA-CH-5739-01 0 671 0 671 0 671 0 671 #> 7518 TCGA-CH-5740-01 0 31 0 31 NA NA 0 31 #> 7519 TCGA-CH-5741-01 0 395 0 395 0 395 0 395 #> 7520 TCGA-CH-5743-01 0 425 0 425 0 425 1 425 #> 7521 TCGA-CH-5744-01 0 60 0 60 NA NA 0 60 #> 7522 TCGA-CH-5745-01 0 91 0 91 NA NA 0 91 #> 7523 TCGA-CH-5746-01 0 731 0 731 0 731 0 731 #> 7524 TCGA-CH-5748-01 0 31 0 31 NA NA 0 31 #> 7525 TCGA-CH-5750-01 0 396 0 396 0 396 0 396 #> 7526 TCGA-CH-5751-01 0 1065 0 1065 1 365 1 365 #> 7527 TCGA-CH-5752-01 0 943 0 943 0 943 0 943 #> 7528 TCGA-CH-5753-01 0 31 0 31 NA NA 0 31 #> 7529 TCGA-CH-5754-01 0 62 0 62 NA NA 0 62 #> 7530 TCGA-CH-5761-01 0 28 0 28 NA NA 0 28 #> 7531 TCGA-CH-5761-11 0 28 0 28 NA NA 0 28 #> 7532 TCGA-CH-5762-01 0 1339 0 1339 0 1339 0 1339 #> 7533 TCGA-CH-5763-01 0 365 0 365 0 365 0 365 #> 7534 TCGA-CH-5764-01 0 31 0 31 NA NA 0 31 #> 7535 TCGA-CH-5765-01 0 700 0 700 0 700 0 700 #> 7536 TCGA-CH-5766-01 0 31 0 31 NA NA 0 31 #> 7537 TCGA-CH-5767-01 0 458 0 458 0 458 0 458 #> 7538 TCGA-CH-5767-11 0 458 0 458 0 458 0 458 #> 7539 TCGA-CH-5768-01 0 731 0 731 0 731 0 731 #> 7540 TCGA-CH-5768-11 0 731 0 731 0 731 0 731 #> 7541 TCGA-CH-5769-01 0 62 0 62 NA NA 0 62 #> 7542 TCGA-CH-5769-11 0 62 0 62 NA NA 0 62 #> 7543 TCGA-CH-5771-01 0 396 0 396 0 396 0 396 #> 7544 TCGA-CH-5772-01 0 486 0 486 0 486 0 486 #> 7545 TCGA-CH-5788-01 0 821 0 821 NA NA 0 821 #> 7546 TCGA-CH-5789-01 0 304 0 304 0 304 0 304 #> 7547 TCGA-CH-5790-01 0 974 0 974 0 974 0 974 #> 7548 TCGA-CH-5791-01 0 1004 0 1004 0 1004 1 396 #> 7549 TCGA-CH-5792-01 0 91 0 91 NA NA 0 91 #> 7550 TCGA-CH-5794-01 0 882 0 882 0 882 0 882 #> 7551 TCGA-EJ-5494-01 0 1477 0 1477 0 1477 0 1477 #> 7552 TCGA-EJ-5495-01 0 1760 0 1760 0 1760 0 1760 #> 7553 TCGA-EJ-5496-01 0 595 0 595 0 595 0 595 #> 7554 TCGA-EJ-5497-01 0 405 0 405 0 405 0 405 #> 7555 TCGA-EJ-5498-01 0 1720 0 1720 0 1720 0 1720 #> 7556 TCGA-EJ-5499-01 0 1415 0 1415 0 1415 0 1415 #> 7557 TCGA-EJ-5501-01 0 1365 0 1365 0 1365 0 1365 #> 7558 TCGA-EJ-5502-01 0 1171 0 1171 0 1171 0 1171 #> 7559 TCGA-EJ-5503-01 0 1391 0 1391 0 1391 0 1391 #> 7560 TCGA-EJ-5504-01 0 1427 0 1427 NA NA 0 1427 #> 7561 TCGA-EJ-5505-01 0 922 0 922 0 922 0 922 #> 7562 TCGA-EJ-5506-01 0 1381 0 1381 0 1381 0 1381 #> 7563 TCGA-EJ-5507-01 0 1457 0 1457 0 1457 0 1457 #> 7564 TCGA-EJ-5508-01 0 1965 0 1965 0 1965 0 1965 #> 7565 TCGA-EJ-5509-01 0 1464 0 1464 0 1464 0 1464 #> 7566 TCGA-EJ-5510-01 0 1887 0 1887 0 1887 0 1887 #> 7567 TCGA-EJ-5511-01 0 1476 0 1476 0 1476 0 1476 #> 7568 TCGA-EJ-5512-01 0 1733 0 1733 0 1733 0 1733 #> 7569 TCGA-EJ-5514-01 0 1829 0 1829 0 1829 0 1829 #> 7570 TCGA-EJ-5515-01 0 1832 0 1832 0 1832 0 1832 #> 7571 TCGA-EJ-5516-01 0 1889 0 1889 0 1889 0 1889 #> 7572 TCGA-EJ-5517-01 0 1889 0 1889 0 1889 0 1889 #> 7573 TCGA-EJ-5518-01 0 2118 0 2118 NA NA 1 2104 #> 7574 TCGA-EJ-5519-01 0 1962 0 1962 0 1962 0 1962 #> 7575 TCGA-EJ-5521-01 0 2279 0 2279 0 2279 0 2279 #> 7576 TCGA-EJ-5522-01 0 2079 0 2079 0 2079 0 2079 #> 7577 TCGA-EJ-5524-01 0 1882 0 1882 NA NA 1 265 #> 7578 TCGA-EJ-5525-01 0 1115 0 1115 NA NA 1 546 #> 7579 TCGA-EJ-5526-01 0 1909 0 1909 NA NA 1 537 #> 7580 TCGA-EJ-5527-01 0 1778 0 1778 0 1778 0 1778 #> 7581 TCGA-EJ-5530-01 0 1832 0 1832 0 1832 0 1832 #> 7582 TCGA-EJ-5531-01 0 1273 0 1273 0 1273 0 1273 #> 7583 TCGA-EJ-5532-01 0 1828 0 1828 0 1828 0 1828 #> 7584 TCGA-EJ-5542-01 0 1513 0 1513 0 1513 0 1513 #> 7585 TCGA-EJ-7115-01 0 2687 0 2687 0 2687 0 2687 #> 7586 TCGA-EJ-7115-11 0 2687 0 2687 0 2687 0 2687 #> 7587 TCGA-EJ-7123-01 0 2572 0 2572 0 2572 0 2572 #> 7588 TCGA-EJ-7123-11 0 2572 0 2572 0 2572 0 2572 #> 7589 TCGA-EJ-7125-01 0 2850 0 2850 0 2850 0 2850 #> 7590 TCGA-EJ-7125-11 0 2850 0 2850 0 2850 0 2850 #> 7591 TCGA-EJ-7218-01 0 2542 0 2542 0 2542 0 2542 #> 7592 TCGA-EJ-7312-01 0 1099 0 1099 0 1099 0 1099 #> 7593 TCGA-EJ-7314-01 0 1150 0 1150 0 1150 0 1150 #> 7594 TCGA-EJ-7314-11 0 1150 0 1150 0 1150 0 1150 #> 7595 TCGA-EJ-7315-01 0 1008 0 1008 0 1008 0 1008 #> 7596 TCGA-EJ-7315-11 0 1008 0 1008 0 1008 0 1008 #> 7597 TCGA-EJ-7317-01 0 771 0 771 0 771 0 771 #> 7598 TCGA-EJ-7317-11 0 771 0 771 0 771 0 771 #> 7599 TCGA-EJ-7318-01 0 1029 0 1029 NA NA 1 380 #> 7600 TCGA-EJ-7321-01 0 824 0 824 0 824 0 824 #> 7601 TCGA-EJ-7321-11 0 824 0 824 0 824 0 824 #> 7602 TCGA-EJ-7325-01 0 1070 0 1070 0 1070 0 1070 #> 7603 TCGA-EJ-7327-01 0 923 0 923 0 923 0 923 #> 7604 TCGA-EJ-7327-11 0 923 0 923 0 923 0 923 #> 7605 TCGA-EJ-7328-01 0 842 0 842 0 842 0 842 #> 7606 TCGA-EJ-7328-11 0 842 0 842 0 842 0 842 #> 7607 TCGA-EJ-7330-01 0 191 0 191 NA NA 0 191 #> 7608 TCGA-EJ-7330-11 0 191 0 191 NA NA 0 191 #> 7609 TCGA-EJ-7331-01 0 742 0 742 0 742 0 742 #> 7610 TCGA-EJ-7331-11 0 742 0 742 0 742 0 742 #> 7611 TCGA-EJ-7781-01 0 1073 0 1073 0 1073 0 1073 #> 7612 TCGA-EJ-7781-11 0 1073 0 1073 0 1073 0 1073 #> 7613 TCGA-EJ-7782-01 0 1167 0 1167 0 1167 0 1167 #> 7614 TCGA-EJ-7782-11 0 1167 0 1167 0 1167 0 1167 #> 7615 TCGA-EJ-7783-01 0 787 0 787 0 787 0 787 #> 7616 TCGA-EJ-7783-11 0 787 0 787 0 787 0 787 #> 7617 TCGA-EJ-7784-01 0 781 0 781 0 781 0 781 #> 7618 TCGA-EJ-7784-11 0 781 0 781 0 781 0 781 #> 7619 TCGA-EJ-7785-01 0 1177 0 1177 0 1177 0 1177 #> 7620 TCGA-EJ-7785-11 0 1177 0 1177 0 1177 0 1177 #> 7621 TCGA-EJ-7786-01 0 1096 0 1096 0 1096 0 1096 #> 7622 TCGA-EJ-7786-11 0 1096 0 1096 0 1096 0 1096 #> 7623 TCGA-EJ-7788-01 0 859 0 859 0 859 0 859 #> 7624 TCGA-EJ-7789-01 0 1105 0 1105 0 1105 0 1105 #> 7625 TCGA-EJ-7789-11 0 1105 0 1105 0 1105 0 1105 #> 7626 TCGA-EJ-7791-01 0 1118 0 1118 0 1118 0 1118 #> 7627 TCGA-EJ-7792-01 0 1396 0 1396 0 1396 0 1396 #> 7628 TCGA-EJ-7792-11 0 1396 0 1396 0 1396 0 1396 #> 7629 TCGA-EJ-7793-01 0 114 0 114 0 114 0 114 #> 7630 TCGA-EJ-7793-11 0 114 0 114 0 114 0 114 #> 7631 TCGA-EJ-7794-01 0 1306 0 1306 0 1306 0 1306 #> 7632 TCGA-EJ-7794-11 0 1306 0 1306 0 1306 0 1306 #> 7633 TCGA-EJ-7797-01 0 983 0 983 0 983 0 983 #> 7634 TCGA-EJ-7797-11 0 983 0 983 0 983 0 983 #> 7635 TCGA-EJ-8468-01 0 2347 0 2347 0 2347 0 2347 #> 7636 TCGA-EJ-8470-01 0 1159 0 1159 0 1159 0 1159 #> 7637 TCGA-EJ-8472-01 0 756 0 756 NA NA 1 196 #> 7638 TCGA-EJ-8474-01 0 766 0 766 0 766 0 766 #> 7639 TCGA-EJ-A46B-01 0 657 0 657 0 657 0 657 #> 7640 TCGA-EJ-A46D-01 0 626 0 626 0 626 0 626 #> 7641 TCGA-EJ-A46E-01 0 524 0 524 0 524 0 524 #> 7642 TCGA-EJ-A46F-01 0 783 0 783 NA NA 1 215 #> 7643 TCGA-EJ-A46G-01 0 668 0 668 0 668 0 668 #> 7644 TCGA-EJ-A46H-01 0 724 0 724 0 724 0 724 #> 7645 TCGA-EJ-A46I-01 0 668 0 668 0 668 0 668 #> 7646 TCGA-EJ-A65B-01 0 710 0 710 0 710 0 710 #> 7647 TCGA-EJ-A65D-01 0 393 0 393 0 393 0 393 #> 7648 TCGA-EJ-A65E-01 0 417 0 417 0 417 0 417 #> 7649 TCGA-EJ-A65F-01 0 560 0 560 NA NA 1 75 #> 7650 TCGA-EJ-A65G-01 0 666 0 666 0 666 0 666 #> 7651 TCGA-EJ-A65J-01 0 451 0 451 0 451 0 451 #> 7652 TCGA-EJ-A65M-01 0 230 0 230 0 230 0 230 #> 7653 TCGA-EJ-A6RA-01 0 353 0 353 NA NA 1 353 #> 7654 TCGA-EJ-A6RC-01 0 873 0 873 0 873 0 873 #> 7655 TCGA-EJ-A7NF-01 0 250 0 250 0 250 0 250 #> 7656 TCGA-EJ-A7NG-01 0 432 0 432 0 432 0 432 #> 7657 TCGA-EJ-A7NH-01 0 474 0 474 0 474 0 474 #> 7658 TCGA-EJ-A7NJ-01 0 197 0 197 0 197 0 197 #> 7659 TCGA-EJ-A7NK-01 0 476 0 476 0 476 0 476 #> 7660 TCGA-EJ-A7NM-01 0 128 0 128 0 128 0 128 #> 7661 TCGA-EJ-A7NN-01 0 197 0 197 1 197 1 197 #> 7662 TCGA-EJ-A8FN-01 0 329 0 329 0 329 0 329 #> 7663 TCGA-EJ-A8FO-01 0 282 0 282 0 282 0 282 #> 7664 TCGA-EJ-A8FO-11 0 282 0 282 0 282 0 282 #> 7665 TCGA-EJ-A8FP-01 0 299 0 299 1 117 1 117 #> 7666 TCGA-EJ-A8FS-01 0 266 0 266 1 216 1 216 #> 7667 TCGA-EJ-A8FU-01 0 138 0 138 0 138 0 138 #> 7668 TCGA-EJ-AB20-01 0 131 0 131 0 131 0 131 #> 7669 TCGA-EJ-AB27-01 0 145 0 145 0 145 0 145 #> 7670 TCGA-FC-7708-01 0 864 0 864 0 864 0 864 #> 7671 TCGA-FC-7961-01 0 469 0 469 0 469 0 469 #> 7672 TCGA-FC-A4JI-01 0 877 0 877 0 877 0 877 #> 7673 TCGA-FC-A5OB-01 0 680 0 680 NA NA 0 680 #> 7674 TCGA-FC-A66V-01 0 524 0 524 0 524 0 524 #> 7675 TCGA-FC-A6HD-01 0 789 0 789 0 789 0 789 #> 7676 TCGA-FC-A8O0-01 0 616 0 616 0 616 0 616 #> 7677 TCGA-G9-6329-01 0 1266 0 1266 0 1266 0 1266 #> 7678 TCGA-G9-6332-01 0 2657 0 2657 1 1180 1 1180 #> 7679 TCGA-G9-6333-01 0 2465 0 2465 0 2465 0 2465 #> 7680 TCGA-G9-6333-11 0 2465 0 2465 0 2465 0 2465 #> 7681 TCGA-G9-6336-01 0 2068 0 2068 0 2068 0 2068 #> 7682 TCGA-G9-6338-01 0 2028 0 2028 0 2028 0 2028 #> 7683 TCGA-G9-6339-01 0 2551 0 2551 1 1634 1 1634 #> 7684 TCGA-G9-6342-01 0 1696 0 1696 0 1696 0 1696 #> 7685 TCGA-G9-6342-11 0 1696 0 1696 0 1696 0 1696 #> 7686 TCGA-G9-6343-01 0 2450 0 2450 0 2450 0 2450 #> 7687 TCGA-G9-6347-01 0 2089 0 2089 0 2089 0 2089 #> 7688 TCGA-G9-6348-01 0 1515 0 1515 0 1515 0 1515 #> 7689 TCGA-G9-6348-11 0 1515 0 1515 0 1515 0 1515 #> 7690 TCGA-G9-6351-01 0 2048 0 2048 0 2048 0 2048 #> 7691 TCGA-G9-6351-11 0 2048 0 2048 0 2048 0 2048 #> 7692 TCGA-G9-6353-01 0 1542 0 1542 0 1542 0 1542 #> 7693 TCGA-G9-6354-01 0 2066 0 2066 0 2066 0 2066 #> 7694 TCGA-G9-6356-01 0 1434 0 1434 0 1434 0 1434 #> 7695 TCGA-G9-6356-11 0 1434 0 1434 0 1434 0 1434 #> 7696 TCGA-G9-6361-01 0 1415 0 1415 0 1415 0 1415 #> 7697 TCGA-G9-6362-01 0 1443 0 1443 NA NA 0 1443 #> 7698 TCGA-G9-6362-11 0 1443 0 1443 NA NA 0 1443 #> 7699 TCGA-G9-6363-01 0 1378 0 1378 0 1378 0 1378 #> 7700 TCGA-G9-6363-11 0 1378 0 1378 0 1378 0 1378 #> 7701 TCGA-G9-6364-01 0 1198 0 1198 0 1198 0 1198 #> 7702 TCGA-G9-6365-01 0 1363 0 1363 0 1363 0 1363 #> 7703 TCGA-G9-6365-11 0 1363 0 1363 0 1363 0 1363 #> 7704 TCGA-G9-6366-01 0 1947 0 1947 0 1947 0 1947 #> 7705 TCGA-G9-6367-01 0 1222 0 1222 NA NA 0 1222 #> 7706 TCGA-G9-6369-01 0 1215 0 1215 0 1215 0 1215 #> 7707 TCGA-G9-6370-01 0 1156 0 1156 0 1156 0 1156 #> 7708 TCGA-G9-6371-01 0 1226 0 1226 0 1226 0 1226 #> 7709 TCGA-G9-6373-01 0 811 0 811 0 811 0 811 #> 7710 TCGA-G9-6377-01 0 958 0 958 0 958 0 958 #> 7711 TCGA-G9-6378-01 0 1155 0 1155 0 1155 0 1155 #> 7712 TCGA-G9-6379-01 0 1778 0 1778 0 1778 0 1778 #> 7713 TCGA-G9-6384-01 0 765 0 765 0 765 0 765 #> 7714 TCGA-G9-6384-11 0 765 0 765 0 765 0 765 #> 7715 TCGA-G9-6385-01 0 830 0 830 0 830 0 830 #> 7716 TCGA-G9-6494-01 0 1771 0 1771 NA NA 0 1771 #> 7717 TCGA-G9-6496-01 0 1726 0 1726 0 1726 0 1726 #> 7718 TCGA-G9-6496-11 0 1726 0 1726 0 1726 0 1726 #> 7719 TCGA-G9-6498-01 0 1952 0 1952 1 1342 1 1342 #> 7720 TCGA-G9-6499-01 0 1543 0 1543 0 1543 0 1543 #> 7721 TCGA-G9-6499-11 0 1543 0 1543 0 1543 0 1543 #> 7722 TCGA-G9-7509-01 0 1610 0 1610 0 1610 0 1610 #> 7723 TCGA-G9-7510-01 0 1185 0 1185 0 1185 0 1185 #> 7724 TCGA-G9-7519-01 0 849 0 849 0 849 0 849 #> 7725 TCGA-G9-7521-01 0 942 0 942 NA NA 0 942 #> 7726 TCGA-G9-7522-01 0 1078 0 1078 0 1078 0 1078 #> 7727 TCGA-G9-7523-01 0 857 0 857 0 857 0 857 #> 7728 TCGA-G9-7525-01 0 994 0 994 0 994 0 994 #> 7729 TCGA-G9-A9S0-01 1 791 1 791 NA NA 1 423 #> 7730 TCGA-G9-A9S4-01 0 906 0 906 0 906 0 906 #> 7731 TCGA-G9-A9S7-01 0 728 0 728 NA NA 0 728 #> 7732 TCGA-H9-7775-01 0 185 0 185 0 185 0 185 #> 7733 TCGA-H9-A6BX-01 0 941 0 941 0 941 0 941 #> 7734 TCGA-H9-A6BY-01 0 112 0 112 NA NA 0 112 #> 7735 TCGA-HC-7075-01 0 601 0 601 0 601 0 601 #> 7736 TCGA-HC-7077-01 0 2115 0 2115 0 2115 0 2115 #> 7737 TCGA-HC-7078-01 0 1985 0 1985 0 1985 0 1985 #> 7738 TCGA-HC-7079-01 0 1184 0 1184 NA NA 1 380 #> 7739 TCGA-HC-7080-01 0 1106 0 1106 0 1106 1 894 #> 7740 TCGA-HC-7081-01 0 1136 0 1136 NA NA 0 1136 #> 7741 TCGA-HC-7209-01 0 440 0 440 0 440 0 440 #> 7742 TCGA-HC-7210-01 0 868 0 868 0 868 0 868 #> 7743 TCGA-HC-7211-01 0 1221 0 1221 0 1221 0 1221 #> 7744 TCGA-HC-7211-11 0 1221 0 1221 0 1221 0 1221 #> 7745 TCGA-HC-7212-01 0 870 0 870 0 870 0 870 #> 7746 TCGA-HC-7213-01 0 1219 0 1219 NA NA 1 170 #> 7747 TCGA-HC-7230-01 0 1001 0 1001 0 1001 0 1001 #> 7748 TCGA-HC-7231-01 0 939 0 939 0 939 0 939 #> 7749 TCGA-HC-7232-01 0 1161 0 1161 1 766 1 766 #> 7750 TCGA-HC-7233-01 0 1355 0 1355 0 1355 0 1355 #> 7751 TCGA-HC-7736-01 0 1103 0 1103 0 1103 0 1103 #> 7752 TCGA-HC-7737-01 0 1090 0 1090 0 1090 0 1090 #> 7753 TCGA-HC-7737-11 0 1090 0 1090 0 1090 0 1090 #> 7754 TCGA-HC-7738-01 0 964 0 964 NA NA 1 420 #> 7755 TCGA-HC-7738-11 0 964 0 964 NA NA 1 420 #> 7756 TCGA-HC-7740-01 0 717 0 717 0 717 0 717 #> 7757 TCGA-HC-7740-11 0 717 0 717 0 717 0 717 #> 7758 TCGA-HC-7742-01 0 938 0 938 NA NA 0 938 #> 7759 TCGA-HC-7742-11 0 938 0 938 NA NA 0 938 #> 7760 TCGA-HC-7744-01 0 531 0 531 0 531 0 531 #> 7761 TCGA-HC-7745-01 0 721 0 721 0 721 0 721 #> 7762 TCGA-HC-7745-11 0 721 0 721 0 721 0 721 #> 7763 TCGA-HC-7747-01 0 748 0 748 0 748 0 748 #> 7764 TCGA-HC-7747-11 0 748 0 748 0 748 0 748 #> 7765 TCGA-HC-7748-01 0 792 0 792 0 792 0 792 #> 7766 TCGA-HC-7749-01 0 724 0 724 0 724 0 724 #> 7767 TCGA-HC-7750-01 0 522 0 522 0 522 0 522 #> 7768 TCGA-HC-7752-01 0 782 0 782 0 782 0 782 #> 7769 TCGA-HC-7752-11 0 782 0 782 0 782 0 782 #> 7770 TCGA-HC-7817-01 0 928 0 928 0 928 0 928 #> 7771 TCGA-HC-7818-01 0 938 0 938 0 938 0 938 #> 7772 TCGA-HC-7819-01 0 543 0 543 0 543 0 543 #> 7773 TCGA-HC-7819-11 0 543 0 543 0 543 0 543 #> 7774 TCGA-HC-7820-01 0 747 0 747 0 747 0 747 #> 7775 TCGA-HC-7821-01 0 956 0 956 0 956 0 956 #> 7776 TCGA-HC-8213-01 0 589 0 589 0 589 0 589 #> 7777 TCGA-HC-8216-01 0 682 0 682 0 682 0 682 #> 7778 TCGA-HC-8256-01 0 860 0 860 0 860 0 860 #> 7779 TCGA-HC-8257-01 0 726 0 726 0 726 0 726 #> 7780 TCGA-HC-8258-01 0 847 0 847 0 847 0 847 #> 7781 TCGA-HC-8258-11 0 847 0 847 0 847 0 847 #> 7782 TCGA-HC-8259-01 0 924 0 924 0 924 0 924 #> 7783 TCGA-HC-8259-11 0 924 0 924 0 924 0 924 #> 7784 TCGA-HC-8260-01 0 686 0 686 0 686 0 686 #> 7785 TCGA-HC-8260-11 0 686 0 686 0 686 0 686 #> 7786 TCGA-HC-8261-01 0 546 0 546 0 546 0 546 #> 7787 TCGA-HC-8262-01 0 679 0 679 0 679 0 679 #> 7788 TCGA-HC-8262-11 0 679 0 679 0 679 0 679 #> 7789 TCGA-HC-8264-01 0 48 0 48 NA NA 0 48 #> 7790 TCGA-HC-8265-01 0 483 0 483 0 483 0 483 #> 7791 TCGA-HC-8266-01 0 473 0 473 NA NA 0 473 #> 7792 TCGA-HC-A48F-01 0 680 0 680 0 680 0 680 #> 7793 TCGA-HC-A4ZV-01 0 23 0 23 NA NA 0 23 #> 7794 TCGA-HC-A631-01 0 54 0 54 NA NA 0 54 #> 7795 TCGA-HC-A632-01 0 61 0 61 NA NA 0 61 #> 7796 TCGA-HC-A6AL-01 0 67 0 67 NA NA 0 67 #> 7797 TCGA-HC-A6AN-01 0 49 0 49 NA NA 0 49 #> 7798 TCGA-HC-A6AO-01 0 530 0 530 0 530 0 530 #> 7799 TCGA-HC-A6AP-01 0 71 0 71 NA NA 0 71 #> 7800 TCGA-HC-A6AQ-01 0 106 0 106 NA NA 0 106 #> 7801 TCGA-HC-A6AS-01 0 44 0 44 NA NA 0 44 #> 7802 TCGA-HC-A6HX-01 0 38 0 38 NA NA 0 38 #> 7803 TCGA-HC-A6HY-01 0 134 0 134 NA NA 0 134 #> 7804 TCGA-HC-A76W-01 0 213 0 213 NA NA 0 213 #> 7805 TCGA-HC-A76X-01 0 150 0 150 NA NA 0 150 #> 7806 TCGA-HC-A8CY-01 0 290 0 290 NA NA 0 290 #> 7807 TCGA-HC-A8D0-01 0 775 0 775 0 775 0 775 #> 7808 TCGA-HC-A8D1-01 0 573 0 573 0 573 0 573 #> 7809 TCGA-HC-A9TE-01 0 587 0 587 NA NA 1 216 #> 7810 TCGA-HC-A9TH-01 0 844 0 844 NA NA 1 351 #> 7811 TCGA-HI-7168-01 0 3323 0 3323 NA NA 1 2505 #> 7812 TCGA-HI-7169-01 0 2684 0 2684 0 2684 0 2684 #> 7813 TCGA-HI-7170-01 0 2522 0 2522 0 2522 0 2522 #> 7814 TCGA-HI-7171-01 1 1329 1 1329 NA NA 1 1329 #> 7815 TCGA-J4-8198-01 0 614 0 614 0 614 0 614 #> 7816 TCGA-J4-8200-01 0 1218 0 1218 0 1218 0 1218 #> 7817 TCGA-J4-A67K-01 0 1004 0 1004 0 1004 0 1004 #> 7818 TCGA-J4-A67L-01 0 770 0 770 0 770 0 770 #> 7819 TCGA-J4-A67M-01 0 941 0 941 0 941 0 941 #> 7820 TCGA-J4-A67N-01 0 937 0 937 NA NA 1 442 #> 7821 TCGA-J4-A67O-01 0 839 0 839 0 839 0 839 #> 7822 TCGA-J4-A67Q-01 0 975 0 975 0 975 0 975 #> 7823 TCGA-J4-A67R-01 0 910 0 910 0 910 0 910 #> 7824 TCGA-J4-A67S-01 0 833 0 833 1 708 1 708 #> 7825 TCGA-J4-A67T-01 0 183 0 183 0 183 0 183 #> 7826 TCGA-J4-A6G1-01 0 769 0 769 0 769 0 769 #> 7827 TCGA-J4-A6G3-01 0 849 0 849 NA NA 1 618 #> 7828 TCGA-J4-A6M7-01 0 512 0 512 0 512 0 512 #> 7829 TCGA-J4-A83I-01 0 685 0 685 0 685 0 685 #> 7830 TCGA-J4-A83J-01 0 696 0 696 0 696 0 696 #> 7831 TCGA-J4-A83J-11 0 696 0 696 0 696 0 696 #> 7832 TCGA-J4-A83K-01 0 328 0 328 0 328 0 328 #> 7833 TCGA-J4-A83L-01 0 720 0 720 0 720 0 720 #> 7834 TCGA-J4-A83M-01 0 543 0 543 1 521 1 521 #> 7835 TCGA-J4-A83N-01 0 992 0 992 0 992 1 433 #> 7836 TCGA-J4-AATV-01 0 553 0 553 NA NA 0 553 #> 7837 TCGA-J4-AATZ-01 0 412 0 412 1 79 1 79 #> 7838 TCGA-J4-AAU2-01 0 825 0 825 0 825 0 825 #> 7839 TCGA-J9-A52B-01 0 422 0 422 1 57 1 57 #> 7840 TCGA-J9-A52C-01 0 178 0 178 NA NA 0 178 #> 7841 TCGA-J9-A52D-01 0 212 0 212 NA NA 0 212 #> 7842 TCGA-J9-A52E-01 0 323 0 323 NA NA 0 323 #> 7843 TCGA-J9-A8CK-01 0 321 0 321 NA NA 0 321 #> 7844 TCGA-J9-A8CL-01 0 405 0 405 NA NA 1 132 #> 7845 TCGA-J9-A8CM-01 0 463 0 463 NA NA 1 344 #> 7846 TCGA-J9-A8CN-01 0 1237 0 1237 0 1237 0 1237 #> 7847 TCGA-J9-A8CP-01 0 386 0 386 0 386 0 386 #> 7848 TCGA-KC-A4BL-01 0 934 0 934 NA NA 1 193 #> 7849 TCGA-KC-A4BN-01 0 1815 0 1815 0 1815 0 1815 #> 7850 TCGA-KC-A4BR-01 0 1349 0 1349 1 1022 1 1022 #> 7851 TCGA-KC-A4BV-01 0 1328 0 1328 1 1328 1 1328 #> 7852 TCGA-KC-A7F3-01 0 665 0 665 0 665 0 665 #> 7853 TCGA-KC-A7F5-01 0 91 0 91 0 91 0 91 #> 7854 TCGA-KC-A7F6-01 0 263 0 263 0 263 0 263 #> 7855 TCGA-KC-A7FA-01 0 598 0 598 0 598 0 598 #> 7856 TCGA-KC-A7FD-01 0 270 0 270 0 270 0 270 #> 7857 TCGA-KC-A7FE-01 0 352 0 352 0 352 0 352 #> 7858 TCGA-KK-A59V-01 0 3440 0 3440 0 3440 0 3440 #> 7859 TCGA-KK-A59X-01 0 2535 0 2535 NA NA 1 2233 #> 7860 TCGA-KK-A59Y-01 0 1968 0 1968 0 1968 0 1968 #> 7861 TCGA-KK-A59Z-01 0 2628 0 2628 NA NA 0 2628 #> 7862 TCGA-KK-A5A1-01 1 2469 NA 2469 NA NA 1 203 #> 7863 TCGA-KK-A6DY-01 0 4295 0 4295 NA NA 0 4295 #> 7864 TCGA-KK-A6E0-01 0 1483 0 1483 1 941 1 941 #> 7865 TCGA-KK-A6E1-01 0 2198 0 2198 0 2198 0 2198 #> 7866 TCGA-KK-A6E2-01 0 5024 0 5024 0 5024 0 5024 #> 7867 TCGA-KK-A6E3-01 0 2056 0 2056 NA NA 0 2056 #> 7868 TCGA-KK-A6E4-01 1 3502 0 3502 0 3502 0 3502 #> 7869 TCGA-KK-A6E5-01 0 2073 0 2073 0 2073 0 2073 #> 7870 TCGA-KK-A6E6-01 0 3447 0 3447 NA NA 0 3447 #> 7871 TCGA-KK-A6E7-01 0 2760 0 2760 NA NA 1 925 #> 7872 TCGA-KK-A6E8-01 0 1770 0 1770 NA NA 0 1770 #> 7873 TCGA-KK-A7AP-01 0 196 0 196 NA NA 0 196 #> 7874 TCGA-KK-A7AQ-01 0 1610 0 1610 1 1217 1 1217 #> 7875 TCGA-KK-A7AU-01 0 1775 0 1775 NA NA 1 207 #> 7876 TCGA-KK-A7AV-01 0 822 0 822 0 822 0 822 #> 7877 TCGA-KK-A7AW-01 0 1054 0 1054 NA NA 0 1054 #> 7878 TCGA-KK-A7AY-01 0 1754 0 1754 1 1124 1 1124 #> 7879 TCGA-KK-A7AZ-01 0 1519 0 1519 NA NA 0 1519 #> 7880 TCGA-KK-A7B0-01 0 1329 0 1329 NA NA 1 606 #> 7881 TCGA-KK-A7B1-01 0 1063 0 1063 0 1063 0 1063 #> 7882 TCGA-KK-A7B2-01 0 1099 0 1099 NA NA 1 692 #> 7883 TCGA-KK-A7B3-01 0 899 0 899 1 294 1 294 #> 7884 TCGA-KK-A7B4-01 0 987 0 987 NA NA 1 637 #> 7885 TCGA-KK-A8I4-01 0 2259 0 2259 NA NA 1 1162 #> 7886 TCGA-KK-A8I5-01 0 3096 0 3096 0 3096 0 3096 #> 7887 TCGA-KK-A8I6-01 0 668 0 668 0 668 0 668 #> 7888 TCGA-KK-A8I7-01 0 2002 0 2002 NA NA 1 1088 #> 7889 TCGA-KK-A8I8-01 0 967 0 967 0 967 0 967 #> 7890 TCGA-KK-A8I9-01 0 1001 0 1001 1 940 1 940 #> 7891 TCGA-KK-A8IA-01 0 1931 0 1931 NA NA 0 1931 #> 7892 TCGA-KK-A8IB-01 0 83 0 83 NA NA 0 83 #> 7893 TCGA-KK-A8IC-01 0 2051 0 2051 NA NA 1 1060 #> 7894 TCGA-KK-A8ID-01 0 2107 0 2107 0 2107 0 2107 #> 7895 TCGA-KK-A8IF-01 0 804 0 804 NA NA 1 648 #> 7896 TCGA-KK-A8IG-01 0 2505 0 2505 0 2505 0 2505 #> 7897 TCGA-KK-A8IH-01 0 2013 0 2013 0 2013 0 2013 #> 7898 TCGA-KK-A8II-01 1 3467 1 3467 NA NA 1 626 #> 7899 TCGA-KK-A8IJ-01 0 1559 0 1559 NA NA 1 307 #> 7900 TCGA-KK-A8IK-01 0 2052 0 2052 0 2052 0 2052 #> 7901 TCGA-KK-A8IL-01 1 628 NA 628 NA NA 0 628 #> 7902 TCGA-KK-A8IM-01 0 1915 0 1915 0 1915 0 1915 #> 7903 TCGA-M7-A71Y-01 0 493 0 493 0 493 0 493 #> 7904 TCGA-M7-A71Z-01 0 643 0 643 0 643 0 643 #> 7905 TCGA-M7-A720-01 0 384 0 384 0 384 0 384 #> 7906 TCGA-M7-A721-01 0 400 0 400 0 400 0 400 #> 7907 TCGA-M7-A722-01 0 1060 0 1060 NA NA 1 559 #> 7908 TCGA-M7-A723-01 0 763 0 763 0 763 0 763 #> 7909 TCGA-M7-A724-01 0 889 0 889 NA NA 0 889 #> 7910 TCGA-M7-A725-01 0 573 0 573 0 573 0 573 #> 7911 TCGA-MG-AAMC-01 0 173 0 173 0 173 0 173 #> 7912 TCGA-QU-A6IL-01 0 97 0 97 0 97 0 97 #> 7913 TCGA-QU-A6IM-01 0 1247 0 1247 0 1247 0 1247 #> 7914 TCGA-QU-A6IN-01 0 4264 0 4264 0 4264 0 4264 #> 7915 TCGA-QU-A6IO-01 0 3716 0 3716 0 3716 0 3716 #> 7916 TCGA-QU-A6IP-01 0 2620 0 2620 0 2620 0 2620 #> 7917 TCGA-SU-A7E7-01 0 551 0 551 0 551 0 551 #> 7918 TCGA-TK-A8OK-01 0 27 0 27 NA NA 0 27 #> 7919 TCGA-TP-A8TT-01 0 526 0 526 NA NA 0 526 #> 7920 TCGA-TP-A8TV-01 0 610 0 610 0 610 0 610 #> 7921 TCGA-V1-A8MF-01 0 1449 0 1449 0 1449 0 1449 #> 7922 TCGA-V1-A8MG-01 0 857 0 857 0 857 0 857 #> 7923 TCGA-V1-A8MJ-01 0 1791 0 1791 NA NA 0 1791 #> 7924 TCGA-V1-A8MK-01 0 508 0 508 0 508 0 508 #> 7925 TCGA-V1-A8ML-01 0 448 0 448 0 448 0 448 #> 7926 TCGA-V1-A8MM-01 0 1195 0 1195 1 990 1 990 #> 7927 TCGA-V1-A8MU-01 0 1876 0 1876 NA NA 0 1876 #> 7928 TCGA-V1-A8WL-01 0 1948 0 1948 0 1948 0 1948 #> 7929 TCGA-V1-A8WN-01 0 924 0 924 0 924 0 924 #> 7930 TCGA-V1-A8WS-01 0 474 0 474 NA NA 0 474 #> 7931 TCGA-V1-A8WV-01 0 686 0 686 0 686 0 686 #> 7932 TCGA-V1-A8WW-01 0 1078 0 1078 0 1078 0 1078 #> 7933 TCGA-V1-A8X3-01 0 202 0 202 0 202 0 202 #> 7934 TCGA-V1-A9O5-06 0 1932 0 1932 1 124 1 124 #> 7935 TCGA-V1-A9O5-01 0 1932 0 1932 1 124 1 124 #> 7936 TCGA-V1-A9O7-01 0 2499 0 2499 NA NA 1 819 #> 7937 TCGA-V1-A9O9-01 0 2870 0 2870 0 2870 0 2870 #> 7938 TCGA-V1-A9OA-01 0 636 0 636 0 636 0 636 #> 7939 TCGA-V1-A9OF-01 0 1184 0 1184 0 1184 0 1184 #> 7940 TCGA-V1-A9OH-01 0 2403 0 2403 0 2403 0 2403 #> 7941 TCGA-V1-A9OL-01 0 1913 0 1913 1 105 1 105 #> 7942 TCGA-V1-A9OQ-01 0 371 0 371 0 371 0 371 #> 7943 TCGA-V1-A9OT-01 0 476 0 476 NA NA 1 292 #> 7944 TCGA-V1-A9OX-01 0 1134 0 1134 NA NA 0 1134 #> 7945 TCGA-V1-A9OY-01 0 1067 0 1067 0 1067 0 1067 #> 7946 TCGA-V1-A9Z7-01 0 874 0 874 0 874 0 874 #> 7947 TCGA-V1-A9Z8-01 0 827 0 827 0 827 0 827 #> 7948 TCGA-V1-A9Z9-01 0 540 0 540 0 540 0 540 #> 7949 TCGA-V1-A9ZG-01 0 1517 0 1517 0 1517 0 1517 #> 7950 TCGA-V1-A9ZI-01 0 1640 0 1640 NA NA 0 1640 #> 7951 TCGA-V1-A9ZK-01 0 1383 0 1383 0 1383 0 1383 #> 7952 TCGA-V1-A9ZR-01 0 1361 0 1361 0 1361 0 1361 #> 7953 TCGA-VN-A88I-01 0 269 0 269 NA NA 0 269 #> 7954 TCGA-VN-A88K-01 0 776 0 776 0 776 0 776 #> 7955 TCGA-VN-A88L-01 0 746 0 746 0 746 0 746 #> 7956 TCGA-VN-A88M-01 0 189 0 189 0 189 0 189 #> 7957 TCGA-VN-A88N-01 0 766 0 766 0 766 0 766 #> 7958 TCGA-VN-A88O-01 0 481 0 481 0 481 0 481 #> 7959 TCGA-VN-A88P-01 0 1260 0 1260 0 1260 0 1260 #> 7960 TCGA-VN-A88Q-01 0 1366 0 1366 0 1366 0 1366 #> 7961 TCGA-VN-A88R-01 0 784 0 784 NA NA 1 512 #> 7962 TCGA-VN-A943-01 0 496 0 496 0 496 0 496 #> 7963 TCGA-VP-A872-01 0 3631 0 3631 0 3631 0 3631 #> 7964 TCGA-VP-A875-01 0 2309 0 2309 0 2309 0 2309 #> 7965 TCGA-VP-A876-01 0 3333 0 3333 0 3333 0 3333 #> 7966 TCGA-VP-A878-01 0 3130 0 3130 NA NA 1 98 #> 7967 TCGA-VP-A879-01 1 728 0 728 0 728 0 728 #> 7968 TCGA-VP-A87B-01 0 2722 0 2722 0 2722 1 2473 #> 7969 TCGA-VP-A87C-01 0 1690 0 1690 0 1690 0 1690 #> 7970 TCGA-VP-A87D-01 0 1853 0 1853 1 1194 1 1194 #> 7971 TCGA-VP-A87E-01 0 2037 0 2037 0 2037 0 2037 #> 7972 TCGA-VP-A87H-01 0 663 0 663 0 663 0 663 #> 7973 TCGA-VP-A87J-01 0 1774 0 1774 0 1774 0 1774 #> 7974 TCGA-VP-A87K-01 0 1306 0 1306 1 533 1 533 #> 7975 TCGA-VP-AA1N-01 0 1365 0 1365 0 1365 0 1365 #> 7976 TCGA-WW-A8ZI-01 0 449 0 449 0 449 0 449 #> 7977 TCGA-X4-A8KQ-01 0 1383 0 1383 NA NA 0 1383 #> 7978 TCGA-X4-A8KS-01 0 979 0 979 NA NA 0 979 #> 7979 TCGA-XA-A8JR-01 0 376 0 376 0 376 0 376 #> 7980 TCGA-XJ-A83F-01 0 1127 0 1127 0 1127 0 1127 #> 7981 TCGA-XJ-A83G-01 0 1461 0 1461 0 1461 0 1461 #> 7982 TCGA-XJ-A83H-01 0 1280 0 1280 NA NA 0 1280 #> 7983 TCGA-XJ-A9DI-01 0 1461 0 1461 0 1461 0 1461 #> 7984 TCGA-XJ-A9DK-01 0 275 0 275 0 275 0 275 #> 7985 TCGA-XJ-A9DQ-01 0 91 0 91 NA NA 0 91 #> 7986 TCGA-XJ-A9DX-01 0 973 0 973 NA NA 0 973 #> 7987 TCGA-XK-AAIR-01 0 972 0 972 0 972 0 972 #> 7988 TCGA-XK-AAIV-01 0 1133 0 1133 0 1133 0 1133 #> 7989 TCGA-XK-AAIW-01 0 1218 0 1218 0 1218 1 427 #> 7990 TCGA-XK-AAJ3-01 0 1262 0 1262 0 1262 0 1262 #> 7991 TCGA-XK-AAJA-01 0 930 0 930 0 930 0 930 #> 7992 TCGA-XK-AAJP-01 0 1259 0 1259 0 1259 0 1259 #> 7993 TCGA-XK-AAJR-01 0 1124 0 1124 1 131 1 131 #> 7994 TCGA-XK-AAJT-01 0 1434 0 1434 NA NA 0 1434 #> 7995 TCGA-XK-AAJU-01 0 1576 0 1576 0 1576 0 1576 #> 7996 TCGA-XK-AAK1-01 0 979 0 979 0 979 0 979 #> 7997 TCGA-XQ-A8TA-01 1 146 1 146 NA NA 1 146 #> 7998 TCGA-XQ-A8TB-01 0 770 0 770 0 770 0 770 #> 7999 TCGA-Y6-A8TL-01 0 992 0 992 NA NA 0 992 #> 8000 TCGA-Y6-A9XI-01 0 526 0 526 0 526 0 526 #> 8001 TCGA-YJ-A8SW-01 0 148 0 148 NA NA 0 148 #> 8002 TCGA-YL-A8HJ-01 0 1611 0 1611 0 1611 0 1611 #> 8003 TCGA-YL-A8HK-01 0 1491 0 1491 1 1376 1 1376 #> 8004 TCGA-YL-A8HL-01 0 1565 0 1565 NA NA 0 1565 #> 8005 TCGA-YL-A8HM-01 0 1482 0 1482 1 1473 1 1473 #> 8006 TCGA-YL-A8HO-01 0 2304 0 2304 NA NA 1 1068 #> 8007 TCGA-YL-A8S8-01 0 1890 0 1890 NA NA 1 679 #> 8008 TCGA-YL-A8S9-01 0 1842 0 1842 NA NA 1 1006 #> 8009 TCGA-YL-A8SA-01 0 512 0 512 NA NA 0 512 #> 8010 TCGA-YL-A8SB-01 0 1719 0 1719 NA NA 1 1384 #> 8011 TCGA-YL-A8SC-01 0 1261 0 1261 NA NA 1 152 #> 8012 TCGA-YL-A8SF-01 0 1373 0 1373 NA NA 0 1373 #> 8013 TCGA-YL-A8SH-01 1 875 0 875 0 875 0 875 #> 8014 TCGA-YL-A8SI-01 0 1614 0 1614 1 1423 1 1423 #> 8015 TCGA-YL-A8SJ-01 0 1395 0 1395 1 752 1 752 #> 8016 TCGA-YL-A8SK-01 0 1408 0 1408 NA NA 0 1408 #> 8017 TCGA-YL-A8SL-01 0 987 0 987 0 987 0 987 #> 8018 TCGA-YL-A8SO-01 0 3479 0 3479 NA NA 0 3479 #> 8019 TCGA-YL-A8SP-01 0 2366 0 2366 NA NA 1 2036 #> 8020 TCGA-YL-A8SQ-01 0 2083 0 2083 NA NA 1 329 #> 8021 TCGA-YL-A8SR-01 0 273 0 273 NA NA 0 273 #> 8022 TCGA-YL-A9WH-01 0 427 0 427 NA NA 0 427 #> 8023 TCGA-YL-A9WI-01 0 1623 0 1623 NA NA 0 1623 #> 8024 TCGA-YL-A9WJ-01 1 1855 1 1855 NA NA 1 1476 #> 8025 TCGA-YL-A9WK-01 0 2136 0 2136 NA NA 1 1009 #> 8026 TCGA-YL-A9WL-01 0 740 0 740 1 740 1 740 #> 8027 TCGA-YL-A9WX-01 0 1518 0 1518 NA NA 1 1506 #> 8028 TCGA-YL-A9WY-01 0 1098 0 1098 NA NA 1 765 #> 8029 TCGA-ZG-A8QW-01 0 94 0 94 NA NA 0 94 #> 8030 TCGA-ZG-A8QX-01 0 442 0 442 NA NA 0 442 #> 8031 TCGA-ZG-A8QY-01 0 404 0 404 NA NA 0 404 #> 8032 TCGA-ZG-A8QZ-01 0 308 0 308 NA NA 0 308 #> 8033 TCGA-ZG-A9KY-01 0 130 0 130 NA NA 0 130 #> 8034 TCGA-ZG-A9L0-01 0 355 0 355 NA NA 0 355 #> 8035 TCGA-ZG-A9L1-01 0 1302 0 1302 NA NA 0 1302 #> 8036 TCGA-ZG-A9L2-01 0 1154 0 1154 NA NA 1 180 #> 8037 TCGA-ZG-A9L5-01 0 908 0 908 NA NA 0 908 #> 8038 TCGA-ZG-A9L6-01 0 687 0 687 NA NA 1 664 #> 8039 TCGA-ZG-A9L9-01 0 617 0 617 NA NA 1 51 #> 8040 TCGA-ZG-A9LB-01 0 583 0 583 NA NA 0 583 #> 8041 TCGA-ZG-A9LM-01 0 378 0 378 0 378 0 378 #> 8042 TCGA-ZG-A9LN-01 0 115 0 115 NA NA 0 115 #> 8043 TCGA-ZG-A9LS-01 0 516 0 516 0 516 0 516 #> 8044 TCGA-ZG-A9LU-01 0 579 0 579 NA NA 0 579 #> 8045 TCGA-ZG-A9LY-01 0 370 0 370 0 370 0 370 #> 8046 TCGA-ZG-A9LZ-01 0 692 0 692 NA NA 0 692 #> 8047 TCGA-ZG-A9M4-01 0 547 0 547 NA NA 0 547 #> 8048 TCGA-ZG-A9MC-01 0 455 0 455 NA NA 0 455 #> 8049 TCGA-ZG-A9N3-01 0 349 0 349 NA NA 0 349 #> 8050 TCGA-ZG-A9ND-01 0 410 0 410 0 410 0 410 #> 8051 TCGA-ZG-A9NI-01 0 132 0 132 0 132 0 132 #> 8052 TCGA-AF-2687-01 0 1427 0 1427 1 1267 1 1267 #> 8053 TCGA-AF-2689-11 1 1201 1 1201 NA NA 1 301 #> 8054 TCGA-AF-2690-01 1 524 0 524 NA NA 0 524 #> 8055 TCGA-AF-2691-11 0 1309 0 1309 0 1309 0 1309 #> 8056 TCGA-AF-2692-11 0 412 0 412 NA NA 1 327 #> 8057 TCGA-AF-2693-01 0 1155 0 1155 NA NA 0 1155 #> 8058 TCGA-AF-3400-11 0 1049 0 1049 NA NA 0 1049 #> 8059 TCGA-AF-3911-01 0 1148 0 1148 1 695 1 695 #> 8060 TCGA-AF-4110-01 0 912 0 912 NA NA 0 912 #> 8061 TCGA-AF-5654-01 1 512 0 512 NA NA 0 512 #> 8062 TCGA-AF-5654-11 1 512 0 512 NA NA 0 512 #> 8063 TCGA-AF-6136-01 0 741 0 741 NA NA 1 199 #> 8064 TCGA-AF-6655-01 0 609 0 609 0 609 0 609 #> 8065 TCGA-AF-6672-01 0 748 0 748 NA NA 1 279 #> 8066 TCGA-AF-A56K-01 0 2635 0 2635 1 1217 1 1217 #> 8067 TCGA-AF-A56L-01 0 2007 0 2007 0 2007 0 2007 #> 8068 TCGA-AF-A56N-01 0 360 0 360 0 360 0 360 #> 8069 TCGA-AG-3591-01 0 1035 0 1035 0 1035 0 1035 #> 8070 TCGA-AG-3592-01 0 1035 0 1035 NA NA 0 1035 #> 8071 TCGA-AG-3725-01 0 638 0 638 NA NA 0 638 #> 8072 TCGA-AG-3725-11 0 638 0 638 NA NA 0 638 #> 8073 TCGA-AG-3731-01 0 1126 0 1126 NA NA 0 1126 #> 8074 TCGA-AG-3731-11 0 1126 0 1126 NA NA 0 1126 #> 8075 TCGA-AG-3732-01 0 1003 0 1003 0 1003 0 1003 #> 8076 TCGA-AG-3732-11 0 1003 0 1003 0 1003 0 1003 #> 8077 TCGA-AG-3742-01 0 30 0 30 NA NA 0 30 #> 8078 TCGA-AG-3742-11 0 30 0 30 NA NA 0 30 #> 8079 TCGA-AG-4021-01 1 121 1 121 NA NA 1 0 #> 8080 TCGA-AG-4022-01 0 1400 0 1400 0 1400 0 1400 #> 8081 TCGA-AH-6544-01 0 1173 0 1173 NA NA 0 1173 #> 8082 TCGA-AH-6547-01 1 76 0 76 0 76 0 76 #> 8083 TCGA-AH-6549-01 0 532 0 532 0 532 0 532 #> 8084 TCGA-AH-6643-01 1 1314 1 1314 1 1026 1 1026 #> 8085 TCGA-AH-6643-11 1 1314 1 1314 1 1026 1 1026 #> 8086 TCGA-AH-6644-01 0 838 0 838 0 838 0 838 #> 8087 TCGA-AH-6897-01 0 804 0 804 0 804 0 804 #> 8088 TCGA-AH-6903-01 0 592 0 592 0 592 0 592 #> 8089 TCGA-BM-6198-01 0 646 0 646 0 646 0 646 #> 8090 TCGA-CI-6619-01 0 184 0 184 NA NA 0 184 #> 8091 TCGA-CI-6620-01 0 1009 0 1009 NA NA 1 90 #> 8092 TCGA-CI-6621-01 0 419 0 419 NA NA 0 419 #> 8093 TCGA-CI-6622-01 0 1362 0 1362 NA NA 0 1362 #> 8094 TCGA-CI-6623-01 0 1443 0 1443 NA NA 0 1443 #> 8095 TCGA-CI-6624-01 0 1466 0 1466 NA NA 0 1466 #> 8096 TCGA-CL-4957-01 0 425 0 425 0 425 0 425 #> 8097 TCGA-CL-5917-01 0 2376 0 2376 0 2376 0 2376 #> 8098 TCGA-CL-5918-01 0 218 0 218 0 218 0 218 #> 8099 TCGA-DC-4745-01 0 639 0 639 0 639 0 639 #> 8100 TCGA-DC-4749-01 0 762 0 762 0 762 0 762 #> 8101 TCGA-DC-5337-01 0 792 0 792 NA NA 0 792 #> 8102 TCGA-DC-5869-01 0 943 0 943 NA NA 0 943 #> 8103 TCGA-DC-6154-01 0 365 0 365 NA NA 0 365 #> 8104 TCGA-DC-6155-01 0 425 0 425 NA NA 0 425 #> 8105 TCGA-DC-6156-01 0 943 0 943 NA NA 1 30 #> 8106 TCGA-DC-6157-01 0 1581 0 1581 NA NA 0 1581 #> 8107 TCGA-DC-6158-01 1 334 0 334 NA NA 0 334 #> 8108 TCGA-DC-6160-01 0 1339 0 1339 NA NA 0 1339 #> 8109 TCGA-DC-6681-01 0 790 0 790 NA NA 0 790 #> 8110 TCGA-DC-6682-01 0 762 0 762 NA NA 0 762 #> 8111 TCGA-DC-6683-01 0 762 0 762 NA NA 0 762 #> 8112 TCGA-DT-5265-01 0 384 0 384 0 384 0 384 #> 8113 TCGA-DY-A0XA-01 0 3846 0 3846 NA NA 0 3846 #> 8114 TCGA-DY-A1DC-01 1 1258 NA 1258 NA NA 1 630 #> 8115 TCGA-DY-A1DD-01 1 1741 NA 1741 NA NA 0 1741 #> 8116 TCGA-DY-A1DE-01 0 3932 0 3932 NA NA 1 3316 #> 8117 TCGA-DY-A1DF-01 1 734 NA 734 NA NA 0 734 #> 8118 TCGA-DY-A1DG-01 1 1566 NA 1566 NA NA 1 592 #> 8119 TCGA-DY-A1H8-01 1 992 NA 992 NA NA 0 992 #> 8120 TCGA-EF-5830-01 0 106 0 106 NA NA 0 106 #> 8121 TCGA-EF-5831-01 0 127 0 127 NA NA 0 127 #> 8122 TCGA-EI-6506-01 0 625 0 625 NA NA 0 625 #> 8123 TCGA-EI-6507-01 0 607 0 607 NA NA 0 607 #> 8124 TCGA-EI-6508-01 0 636 0 636 NA NA 0 636 #> 8125 TCGA-EI-6509-01 0 517 0 517 NA NA 1 90 #> 8126 TCGA-EI-6510-01 0 556 0 556 NA NA 0 556 #> 8127 TCGA-EI-6511-01 0 482 0 482 NA NA 0 482 #> 8128 TCGA-EI-6512-01 0 538 0 538 NA NA 0 538 #> 8129 TCGA-EI-6513-01 0 497 0 497 NA NA 0 497 #> 8130 TCGA-EI-6514-01 0 496 0 496 NA NA 0 496 #> 8131 TCGA-EI-6881-01 0 499 0 499 NA NA 0 499 #> 8132 TCGA-EI-6882-01 0 262 0 262 NA NA 0 262 #> 8133 TCGA-EI-6884-01 0 328 0 328 NA NA 0 328 #> 8134 TCGA-EI-6885-01 0 415 0 415 NA NA 1 295 #> 8135 TCGA-EI-6917-01 0 531 0 531 NA NA 0 531 #> 8136 TCGA-EI-7002-01 0 364 0 364 NA NA 0 364 #> 8137 TCGA-EI-7004-01 0 257 0 257 NA NA 0 257 #> 8138 TCGA-F5-6464-01 1 303 NA 303 NA NA 0 303 #> 8139 TCGA-F5-6465-01 0 1506 0 1506 0 1506 0 1506 #> 8140 TCGA-F5-6571-01 0 1288 0 1288 1 122 1 122 #> 8141 TCGA-F5-6702-01 0 452 0 452 NA NA 1 368 #> 8142 TCGA-F5-6811-01 0 979 0 979 0 979 0 979 #> 8143 TCGA-F5-6812-01 0 1110 0 1110 0 1110 0 1110 #> 8144 TCGA-F5-6813-01 1 598 1 598 NA NA 1 65 #> 8145 TCGA-F5-6814-01 0 1131 0 1131 0 1131 0 1131 #> 8146 TCGA-F5-6861-01 0 1160 0 1160 0 1160 0 1160 #> 8147 TCGA-F5-6863-01 1 361 1 361 NA NA 1 191 #> 8148 TCGA-F5-6864-01 0 379 0 379 0 379 0 379 #> 8149 TCGA-G5-6233-01 1 556 1 556 NA NA 1 92 #> 8150 TCGA-G5-6235-01 0 1696 0 1696 NA NA 1 1042 #> 8151 TCGA-G5-6572-02 1 1432 0 1432 NA NA 0 1432 #> 8152 TCGA-G5-6572-01 1 1432 0 1432 NA NA 0 1432 #> 8153 TCGA-G5-6641-01 0 804 0 804 NA NA 0 804 #> 8154 TCGA-3B-A9HJ-01 0 1104 0 1104 NA NA 0 1104 #> 8155 TCGA-3B-A9HL-01 1 599 0 599 NA NA 1 229 #> 8156 TCGA-3B-A9HO-01 0 959 0 959 NA NA 1 595 #> 8157 TCGA-3B-A9HP-01 1 1627 1 1627 NA NA 1 517 #> 8158 TCGA-3B-A9HQ-01 0 2085 0 2085 0 2085 0 2085 #> 8159 TCGA-3B-A9HR-01 1 2694 1 2694 1 496 1 496 #> 8160 TCGA-3B-A9HS-01 1 1366 1 1366 1 139 1 139 #> 8161 TCGA-3B-A9HT-01 0 1665 0 1665 0 1665 1 670 #> 8162 TCGA-3B-A9HU-01 0 768 0 768 1 631 1 631 #> 8163 TCGA-3B-A9HV-01 1 437 1 437 NA NA 1 41 #> 8164 TCGA-3B-A9HX-01 0 1303 0 1303 0 1303 0 1303 #> 8165 TCGA-3B-A9HY-01 0 314 0 314 0 314 0 314 #> 8166 TCGA-3B-A9HZ-01 0 1170 0 1170 NA NA 1 309 #> 8167 TCGA-3B-A9I0-01 0 1096 0 1096 1 503 1 503 #> 8168 TCGA-3B-A9I1-01 1 567 1 567 NA NA 1 192 #> 8169 TCGA-3B-A9I3-01 0 808 0 808 NA NA 1 87 #> 8170 TCGA-3R-A8YX-01 1 17 1 17 NA NA 1 17 #> 8171 TCGA-DX-A1KU-01 1 427 1 427 NA NA 1 94 #> 8172 TCGA-DX-A1KW-01 1 995 NA 995 NA NA 0 995 #> 8173 TCGA-DX-A1KX-01 0 2087 0 2087 0 2087 0 2087 #> 8174 TCGA-DX-A1KY-01 1 391 1 391 NA NA 1 205 #> 8175 TCGA-DX-A1KZ-01 0 1372 0 1372 NA NA 1 1294 #> 8176 TCGA-DX-A1L0-01 1 564 1 564 NA NA 1 103 #> 8177 TCGA-DX-A1L1-01 1 1649 1 1649 1 349 1 349 #> 8178 TCGA-DX-A1L2-01 0 2586 0 2586 1 1480 1 1480 #> 8179 TCGA-DX-A1L3-01 1 1020 1 1020 NA NA 1 437 #> 8180 TCGA-DX-A1L4-01 0 2036 0 2036 1 340 1 340 #> 8181 TCGA-DX-A23R-01 0 2271 0 2271 NA NA 0 2271 #> 8182 TCGA-DX-A23T-01 1 160 1 160 NA NA 1 104 #> 8183 TCGA-DX-A23U-01 1 2324 1 2324 NA NA 1 873 #> 8184 TCGA-DX-A23V-01 1 2034 1 2034 NA NA 1 378 #> 8185 TCGA-DX-A23Y-01 1 191 1 191 NA NA 1 172 #> 8186 TCGA-DX-A23Z-01 1 846 1 846 NA NA 1 751 #> 8187 TCGA-DX-A240-01 0 1834 0 1834 0 1834 0 1834 #> 8188 TCGA-DX-A2IZ-01 0 261 0 261 0 261 0 261 #> 8189 TCGA-DX-A2J0-01 1 295 1 295 NA NA 1 213 #> 8190 TCGA-DX-A2J1-01 0 2901 0 2901 NA NA 0 2901 #> 8191 TCGA-DX-A2J4-01 0 2408 0 2408 0 2408 0 2408 #> 8192 TCGA-DX-A3LS-01 1 275 1 275 NA NA 1 114 #> 8193 TCGA-DX-A3LT-01 0 1492 0 1492 1 568 1 568 #> 8194 TCGA-DX-A3LU-01 0 2641 0 2641 NA NA 1 290 #> 8195 TCGA-DX-A3LW-01 0 4150 0 4150 NA NA 1 1125 #> 8196 TCGA-DX-A3LY-01 0 1017 0 1017 0 1017 0 1017 #> 8197 TCGA-DX-A3M1-01 0 1359 0 1359 NA NA 1 1212 #> 8198 TCGA-DX-A3M2-01 0 1055 0 1055 NA NA 0 1055 #> 8199 TCGA-DX-A3U5-01 0 969 0 969 NA NA 0 969 #> 8200 TCGA-DX-A3U6-01 1 1088 1 1088 1 160 1 160 #> 8201 TCGA-DX-A3U7-01 1 1552 1 1552 1 349 1 349 #> 8202 TCGA-DX-A3U8-01 1 138 1 138 1 128 1 128 #> 8203 TCGA-DX-A3U9-01 1 456 1 456 NA NA 1 203 #> 8204 TCGA-DX-A3UA-01 1 325 NA 325 0 325 0 325 #> 8205 TCGA-DX-A3UB-01 0 2247 0 2247 0 2247 0 2247 #> 8206 TCGA-DX-A3UC-01 0 2085 0 2085 1 176 1 176 #> 8207 TCGA-DX-A3UD-01 0 1534 0 1534 1 603 1 603 #> 8208 TCGA-DX-A3UE-01 1 1061 1 1061 1 224 1 224 #> 8209 TCGA-DX-A3UF-01 1 2599 1 2599 NA NA 1 964 #> 8210 TCGA-DX-A48J-01 1 296 1 296 1 97 1 97 #> 8211 TCGA-DX-A48K-01 0 1399 0 1399 0 1399 0 1399 #> 8212 TCGA-DX-A48L-01 1 738 1 738 1 316 1 316 #> 8213 TCGA-DX-A48N-01 0 1073 0 1073 NA NA 0 1073 #> 8214 TCGA-DX-A48O-01 0 1605 0 1605 0 1605 0 1605 #> 8215 TCGA-DX-A48P-01 0 1400 0 1400 0 1400 0 1400 #> 8216 TCGA-DX-A48R-01 0 805 0 805 NA NA 1 315 #> 8217 TCGA-DX-A48U-01 0 3310 0 3310 0 3310 0 3310 #> 8218 TCGA-DX-A6B7-01 0 1143 0 1143 0 1143 0 1143 #> 8219 TCGA-DX-A6B8-01 1 485 1 485 1 42 1 42 #> 8220 TCGA-DX-A6B9-01 0 1138 0 1138 0 1138 0 1138 #> 8221 TCGA-DX-A6BA-01 0 2515 0 2515 1 408 1 408 #> 8222 TCGA-DX-A6BB-01 0 1105 0 1105 NA NA 0 1105 #> 8223 TCGA-DX-A6BE-01 0 881 0 881 0 881 0 881 #> 8224 TCGA-DX-A6BF-01 0 972 0 972 NA NA 1 947 #> 8225 TCGA-DX-A6BG-01 0 1121 0 1121 1 149 1 149 #> 8226 TCGA-DX-A6BH-01 0 821 0 821 NA NA 1 232 #> 8227 TCGA-DX-A6YQ-01 1 93 0 93 0 93 0 93 #> 8228 TCGA-DX-A6YR-01 0 1247 0 1247 0 1247 0 1247 #> 8229 TCGA-DX-A6YS-01 0 2381 0 2381 0 2381 0 2381 #> 8230 TCGA-DX-A6YT-01 0 2044 0 2044 0 2044 0 2044 #> 8231 TCGA-DX-A6YU-01 0 1045 0 1045 0 1045 0 1045 #> 8232 TCGA-DX-A6YV-01 1 1536 1 1536 1 516 1 516 #> 8233 TCGA-DX-A6YX-01 1 513 1 513 1 200 1 200 #> 8234 TCGA-DX-A6YZ-01 0 2625 0 2625 0 2625 0 2625 #> 8235 TCGA-DX-A6Z0-01 1 1953 0 1953 NA NA 0 1953 #> 8236 TCGA-DX-A6Z2-01 0 3079 0 3079 1 2659 1 2659 #> 8237 TCGA-DX-A7EF-01 1 648 1 648 1 294 1 294 #> 8238 TCGA-DX-A7EI-01 1 1049 1 1049 NA NA 1 828 #> 8239 TCGA-DX-A7EL-01 0 2291 0 2291 1 2249 1 2249 #> 8240 TCGA-DX-A7EM-01 0 1892 0 1892 0 1892 0 1892 #> 8241 TCGA-DX-A7EN-01 0 923 0 923 1 352 1 352 #> 8242 TCGA-DX-A7EO-01 0 4627 0 4627 0 4627 0 4627 #> 8243 TCGA-DX-A7EQ-01 1 897 1 897 1 251 1 251 #> 8244 TCGA-DX-A7ER-01 1 1466 0 1466 0 1466 0 1466 #> 8245 TCGA-DX-A7ES-01 0 610 0 610 0 610 0 610 #> 8246 TCGA-DX-A7ET-01 0 463 0 463 0 463 0 463 #> 8247 TCGA-DX-A7EU-01 0 721 0 721 0 721 0 721 #> 8248 TCGA-DX-A8BG-01 0 546 0 546 1 330 1 330 #> 8249 TCGA-DX-A8BH-01 1 439 1 439 1 272 1 272 #> 8250 TCGA-DX-A8BJ-01 1 284 0 284 0 284 0 284 #> 8251 TCGA-DX-A8BK-01 0 1885 0 1885 0 1885 0 1885 #> 8252 TCGA-DX-A8BL-01 0 1373 0 1373 0 1373 0 1373 #> 8253 TCGA-DX-A8BM-01 0 1456 0 1456 0 1456 0 1456 #> 8254 TCGA-DX-A8BN-01 0 1161 0 1161 NA NA 0 1161 #> 8255 TCGA-DX-A8BO-01 0 1240 0 1240 NA NA 1 333 #> 8256 TCGA-DX-A8BP-01 0 428 0 428 NA NA 1 216 #> 8257 TCGA-DX-A8BQ-01 0 1579 0 1579 0 1579 0 1579 #> 8258 TCGA-DX-A8BR-01 0 4573 0 4573 0 4573 0 4573 #> 8259 TCGA-DX-A8BS-01 1 850 0 850 0 850 0 850 #> 8260 TCGA-DX-A8BT-01 0 1230 0 1230 NA NA 1 668 #> 8261 TCGA-DX-A8BU-01 1 1116 1 1116 NA NA 1 107 #> 8262 TCGA-DX-A8BV-01 1 1845 1 1845 1 357 1 357 #> 8263 TCGA-DX-A8BX-01 1 591 1 591 NA NA 1 591 #> 8264 TCGA-DX-A8BZ-01 1 200 1 200 1 90 1 90 #> 8265 TCGA-DX-AATS-01 1 35 0 35 NA NA 0 35 #> 8266 TCGA-DX-AB2E-01 0 541 0 541 1 132 1 132 #> 8267 TCGA-DX-AB2F-01 0 365 0 365 0 365 0 365 #> 8268 TCGA-DX-AB2G-01 0 478 0 478 0 478 0 478 #> 8269 TCGA-DX-AB2H-01 0 482 0 482 0 482 0 482 #> 8270 TCGA-DX-AB2J-01 1 1235 1 1235 NA NA 1 1235 #> 8271 TCGA-DX-AB2L-01 0 2007 0 2007 NA NA 0 2007 #> 8272 TCGA-DX-AB2O-01 0 2619 0 2619 0 2619 0 2619 #> 8273 TCGA-DX-AB2P-01 1 367 1 367 1 161 1 161 #> 8274 TCGA-DX-AB2Q-01 0 2030 0 2030 1 490 1 490 #> 8275 TCGA-DX-AB2S-01 0 280 0 280 0 280 0 280 #> 8276 TCGA-DX-AB2T-01 0 2369 0 2369 1 784 1 784 #> 8277 TCGA-DX-AB2V-01 0 3241 0 3241 0 3241 0 3241 #> 8278 TCGA-DX-AB2W-01 0 3238 0 3238 0 3238 0 3238 #> 8279 TCGA-DX-AB2X-01 1 404 1 404 1 111 1 111 #> 8280 TCGA-DX-AB2Z-01 0 1533 0 1533 0 1533 0 1533 #> 8281 TCGA-DX-AB30-01 1 695 1 695 1 504 1 504 #> 8282 TCGA-DX-AB32-01 0 3102 0 3102 0 3102 0 3102 #> 8283 TCGA-DX-AB35-01 0 928 0 928 1 284 1 284 #> 8284 TCGA-DX-AB36-01 1 1825 NA 1825 NA NA 0 1825 #> 8285 TCGA-DX-AB37-01 1 2575 NA 2575 0 2575 0 2575 #> 8286 TCGA-DX-AB3A-01 1 978 1 978 1 533 1 533 #> 8287 TCGA-DX-AB3B-01 0 1548 0 1548 0 1548 0 1548 #> 8288 TCGA-DX-AB3C-01 0 2169 0 2169 1 567 1 567 #> 8289 TCGA-FX-A2QS-01 0 1495 0 1495 0 1495 0 1495 #> 8290 TCGA-FX-A2QS-11 0 1495 0 1495 0 1495 0 1495 #> 8291 TCGA-FX-A3NJ-01 0 947 0 947 0 947 0 947 #> 8292 TCGA-FX-A3NK-01 0 505 0 505 0 505 0 505 #> 8293 TCGA-FX-A3RE-01 0 660 0 660 NA NA 0 660 #> 8294 TCGA-FX-A3TO-01 0 618 0 618 NA NA 0 618 #> 8295 TCGA-FX-A48G-01 1 605 1 605 NA NA 1 168 #> 8296 TCGA-FX-A76Y-01 0 471 0 471 0 471 0 471 #> 8297 TCGA-FX-A8OO-01 1 245 0 245 0 245 0 245 #> 8298 TCGA-HB-A2OT-01 0 2057 0 2057 0 2057 0 2057 #> 8299 TCGA-HB-A3L4-01 1 1061 1 1061 1 326 1 326 #> 8300 TCGA-HB-A3YV-01 1 139 1 139 NA NA 1 139 #> 8301 TCGA-HB-A43Z-01 0 1126 0 1126 1 894 1 894 #> 8302 TCGA-HB-A5W3-01 1 384 1 384 NA NA 1 384 #> 8303 TCGA-HS-A5N7-01 0 1013 0 1013 0 1013 0 1013 #> 8304 TCGA-HS-A5N8-01 1 22 1 22 NA NA 1 22 #> 8305 TCGA-HS-A5N9-01 0 1585 0 1585 0 1585 0 1585 #> 8306 TCGA-HS-A5NA-01 0 298 0 298 NA NA 0 298 #> 8307 TCGA-IE-A3OV-01 1 2448 1 2448 1 490 1 490 #> 8308 TCGA-IE-A4EH-01 0 819 0 819 0 819 0 819 #> 8309 TCGA-IE-A4EI-01 0 594 0 594 0 594 0 594 #> 8310 TCGA-IE-A4EJ-01 0 98 0 98 NA NA 0 98 #> 8311 TCGA-IE-A4EK-01 0 42 0 42 NA NA 0 42 #> 8312 TCGA-IE-A6BZ-01 0 605 0 605 0 605 0 605 #> 8313 TCGA-IF-A3RQ-01 1 1129 1 1129 1 441 1 441 #> 8314 TCGA-IF-A4AJ-01 1 767 1 767 1 560 1 560 #> 8315 TCGA-IF-A4AK-01 0 1590 0 1590 0 1590 0 1590 #> 8316 TCGA-IS-A3K6-01 1 858 1 858 NA NA 1 858 #> 8317 TCGA-IS-A3K7-01 0 5204 0 5204 1 119 1 119 #> 8318 TCGA-IS-A3K8-01 0 4845 0 4845 0 4845 0 4845 #> 8319 TCGA-IS-A3KA-01 1 413 1 413 1 76 1 76 #> 8320 TCGA-IW-A3M4-01 0 2615 0 2615 1 2207 1 2207 #> 8321 TCGA-IW-A3M5-01 1 180 1 180 1 9 1 9 #> 8322 TCGA-IW-A3M6-01 0 688 0 688 0 688 0 688 #> 8323 TCGA-JV-A5VE-01 0 499 0 499 0 499 0 499 #> 8324 TCGA-JV-A5VF-01 1 32 1 32 NA NA 1 32 #> 8325 TCGA-JV-A75J-01 1 119 1 119 NA NA 1 119 #> 8326 TCGA-K1-A3PN-02 0 3080 0 3080 1 1033 1 1033 #> 8327 TCGA-K1-A3PN-01 0 3080 0 3080 1 1033 1 1033 #> 8328 TCGA-K1-A3PO-01 0 1622 0 1622 0 1622 0 1622 #> 8329 TCGA-K1-A3PO-11 0 1622 0 1622 0 1622 0 1622 #> 8330 TCGA-K1-A42W-01 0 1891 0 1891 1 826 1 826 #> 8331 TCGA-K1-A42X-02 0 3765 0 3765 1 2036 1 2036 #> 8332 TCGA-K1-A42X-01 0 3765 0 3765 1 2036 1 2036 #> 8333 TCGA-K1-A6RT-01 0 528 0 528 1 129 1 129 #> 8334 TCGA-K1-A6RU-01 1 711 1 711 NA NA 1 142 #> 8335 TCGA-K1-A6RV-01 0 158 0 158 NA NA 0 158 #> 8336 TCGA-KD-A5QS-01 1 1941 1 1941 NA NA 1 351 #> 8337 TCGA-KD-A5QT-01 0 499 0 499 0 499 0 499 #> 8338 TCGA-KD-A5QU-01 1 1073 1 1073 1 1060 1 1060 #> 8339 TCGA-KF-A41W-01 0 356 0 356 NA NA 0 356 #> 8340 TCGA-LI-A67I-01 0 922 0 922 NA NA 1 574 #> 8341 TCGA-LI-A9QH-01 1 540 0 540 NA NA 1 426 #> 8342 TCGA-MB-A5Y8-01 0 773 0 773 0 773 0 773 #> 8343 TCGA-MB-A5Y9-01 0 252 0 252 NA NA 0 252 #> 8344 TCGA-MB-A5YA-01 0 15 0 15 0 15 0 15 #> 8345 TCGA-MB-A8JK-01 0 661 0 661 NA NA 0 661 #> 8346 TCGA-MB-A8JL-01 0 600 0 600 0 600 0 600 #> 8347 TCGA-MJ-A68H-01 0 456 0 456 0 456 0 456 #> 8348 TCGA-MJ-A68J-01 0 547 0 547 NA NA 1 268 #> 8349 TCGA-MJ-A850-01 0 681 0 681 NA NA 0 681 #> 8350 TCGA-MO-A47P-01 0 352 0 352 0 352 0 352 #> 8351 TCGA-MO-A47R-01 1 318 1 318 1 259 1 259 #> 8352 TCGA-N1-A6IA-01 1 224 1 224 NA NA 1 116 #> 8353 TCGA-PC-A5DK-01 0 3740 0 3740 0 3740 0 3740 #> 8354 TCGA-PC-A5DL-01 1 1142 NA 1142 NA NA 0 1142 #> 8355 TCGA-PC-A5DM-01 1 193 NA 193 NA NA 0 193 #> 8356 TCGA-PC-A5DN-01 1 1175 0 1175 NA NA 0 1175 #> 8357 TCGA-PC-A5DO-01 1 2464 1 2464 NA NA 1 2464 #> 8358 TCGA-PC-A5DP-01 1 550 1 550 NA NA 1 550 #> 8359 TCGA-PT-A8TR-01 0 813 0 813 NA NA 0 813 #> 8360 TCGA-QC-A6FX-01 0 637 0 637 0 637 0 637 #> 8361 TCGA-QC-A7B5-01 0 398 0 398 NA NA 1 259 #> 8362 TCGA-QC-AA9N-01 0 537 0 537 NA NA 0 537 #> 8363 TCGA-QQ-A5V2-01 0 56 0 56 NA NA 0 56 #> 8364 TCGA-QQ-A5V9-01 1 1424 1 1424 1 405 1 405 #> 8365 TCGA-QQ-A5VA-01 1 550 1 550 NA NA 1 550 #> 8366 TCGA-QQ-A5VB-01 1 1478 1 1478 NA NA 1 111 #> 8367 TCGA-QQ-A5VC-01 0 1092 0 1092 0 1092 0 1092 #> 8368 TCGA-QQ-A5VD-01 0 1129 0 1129 0 1129 0 1129 #> 8369 TCGA-QQ-A8VB-01 0 5723 0 5723 NA NA 1 2682 #> 8370 TCGA-QQ-A8VD-01 0 3964 0 3964 NA NA 1 499 #> 8371 TCGA-QQ-A8VF-01 0 3406 0 3406 NA NA 0 3406 #> 8372 TCGA-QQ-A8VG-01 1 1970 1 1970 NA NA 1 1852 #> 8373 TCGA-QQ-A8VH-01 1 320 1 320 NA NA 1 197 #> 8374 TCGA-RN-A68Q-01 0 22 0 22 NA NA 0 22 #> 8375 TCGA-RN-AAAQ-01 0 510 0 510 NA NA 1 307 #> 8376 TCGA-SG-A6Z4-01 0 576 0 576 NA NA 1 105 #> 8377 TCGA-SG-A6Z7-01 1 118 0 118 NA NA 0 118 #> 8378 TCGA-SG-A849-01 0 533 0 533 NA NA 0 533 #> 8379 TCGA-SI-A71O-06 1 694 1 694 NA NA 1 264 #> 8380 TCGA-SI-A71O-01 1 694 1 694 NA NA 1 264 #> 8381 TCGA-SI-A71P-01 0 771 0 771 NA NA 0 771 #> 8382 TCGA-SI-A71Q-01 0 996 0 996 0 996 0 996 #> 8383 TCGA-SI-AA8B-01 1 262 1 262 NA NA 1 262 #> 8384 TCGA-SI-AA8C-01 0 597 0 597 NA NA 1 273 #> 8385 TCGA-UE-A6QT-01 0 402 0 402 0 402 0 402 #> 8386 TCGA-UE-A6QU-01 0 408 0 408 0 408 0 408 #> 8387 TCGA-VT-A80G-01 0 326 0 326 1 26 1 26 #> 8388 TCGA-VT-A80J-02 0 796 0 796 1 355 1 355 #> 8389 TCGA-VT-A80J-01 0 796 0 796 1 355 1 355 #> 8390 TCGA-VT-AB3D-01 0 379 0 379 0 379 0 379 #> 8391 TCGA-WK-A8XO-01 1 363 1 363 1 105 1 105 #> 8392 TCGA-WK-A8XQ-01 1 146 1 146 NA NA 1 27 #> 8393 TCGA-WK-A8XS-01 0 2579 0 2579 0 2579 0 2579 #> 8394 TCGA-WK-A8XT-01 1 1262 1 1262 1 599 1 599 #> 8395 TCGA-WK-A8XX-01 1 1164 1 1164 1 111 1 111 #> 8396 TCGA-WK-A8XY-01 1 1991 1 1991 NA NA 1 103 #> 8397 TCGA-WK-A8XZ-01 1 1722 1 1722 1 89 1 89 #> 8398 TCGA-WK-A8Y0-01 1 688 1 688 1 111 1 111 #> 8399 TCGA-WP-A9GB-01 1 261 1 261 NA NA 1 214 #> 8400 TCGA-X2-A95T-01 0 1927 0 1927 0 1927 0 1927 #> 8401 TCGA-X6-A7W8-01 1 804 1 804 NA NA 1 146 #> 8402 TCGA-X6-A7WA-01 0 1092 0 1092 NA NA 0 1092 #> 8403 TCGA-X6-A7WB-01 1 550 1 550 NA NA 1 104 #> 8404 TCGA-X6-A7WC-01 0 1379 0 1379 1 301 1 301 #> 8405 TCGA-X6-A7WD-01 0 938 0 938 1 558 1 558 #> 8406 TCGA-X6-A8C2-01 0 1070 0 1070 NA NA 1 7 #> 8407 TCGA-X6-A8C3-01 0 583 0 583 NA NA 0 583 #> 8408 TCGA-X6-A8C4-01 1 628 1 628 NA NA 1 71 #> 8409 TCGA-X6-A8C5-01 0 1547 0 1547 0 1547 0 1547 #> 8410 TCGA-X6-A8C6-01 1 1067 1 1067 NA NA 1 408 #> 8411 TCGA-X6-A8C7-01 0 896 0 896 0 896 0 896 #> 8412 TCGA-X9-A971-01 0 831 0 831 1 224 1 224 #> 8413 TCGA-X9-A973-01 0 1108 0 1108 1 119 1 119 #> 8414 TCGA-Z4-A8JB-01 0 133 0 133 0 133 0 133 #> 8415 TCGA-Z4-A9VC-01 0 407 0 407 0 407 0 407 #> 8416 TCGA-Z4-AAPF-01 0 485 0 485 0 485 0 485 #> 8417 TCGA-Z4-AAPG-01 0 486 0 486 0 486 0 486 #> 8418 TCGA-3N-A9WB-06 1 518 1 518 NA NA 1 426 #> 8419 TCGA-3N-A9WC-06 0 2022 0 2022 NA NA 1 1705 #> 8420 TCGA-3N-A9WD-06 1 395 1 395 NA NA 1 306 #> 8421 TCGA-BF-A1PU-01 0 387 0 387 NA NA 1 484 #> 8422 TCGA-BF-A1PV-01 0 14 0 14 NA NA 0 14 #> 8423 TCGA-BF-A1PX-01 1 282 0 282 NA NA 0 282 #> 8424 TCGA-BF-A1PZ-01 0 853 0 853 NA NA 0 853 #> 8425 TCGA-BF-A1Q0-01 0 831 0 831 NA NA 0 831 #> 8426 TCGA-BF-A3DJ-01 0 464 0 464 NA NA 1 217 #> 8427 TCGA-BF-A3DL-01 0 769 0 769 NA NA 0 769 #> 8428 TCGA-BF-A3DM-01 0 601 0 601 NA NA 0 601 #> 8429 TCGA-BF-A3DN-01 0 717 0 717 NA NA 0 717 #> 8430 TCGA-BF-A5EO-01 0 703 0 703 NA NA 0 703 #> 8431 TCGA-BF-A5EP-01 0 335 0 335 NA NA 0 335 #> 8432 TCGA-BF-A5EQ-01 0 323 0 323 NA NA 0 323 #> 8433 TCGA-BF-A5ER-01 0 327 0 327 NA NA 0 327 #> 8434 TCGA-BF-A5ES-01 0 490 0 490 NA NA 0 490 #> 8435 TCGA-BF-A9VF-01 0 440 0 440 NA NA 0 440 #> 8436 TCGA-BF-AAOU-01 0 476 0 476 NA NA 0 476 #> 8437 TCGA-BF-AAOX-01 0 444 0 444 NA NA 0 444 #> 8438 TCGA-BF-AAP0-06 0 454 0 454 NA NA 0 454 #> 8439 TCGA-BF-AAP1-01 0 409 0 409 NA NA 0 409 #> 8440 TCGA-BF-AAP2-01 0 405 0 405 NA NA 0 405 #> 8441 TCGA-BF-AAP4-01 0 335 0 335 NA NA 0 335 #> 8442 TCGA-BF-AAP6-01 0 325 0 325 NA NA 0 325 #> 8443 TCGA-BF-AAP7-01 0 318 0 318 NA NA 0 318 #> 8444 TCGA-BF-AAP8-01 0 447 0 447 NA NA 0 447 #> 8445 TCGA-D3-A1Q1-06 1 504 1 504 NA NA 1 58 #> 8446 TCGA-D3-A1Q3-06 1 507 1 507 NA NA 1 507 #> 8447 TCGA-D3-A1Q4-06 0 3408 0 3408 NA NA 0 3408 #> 8448 TCGA-D3-A1Q5-06 1 3424 NA 3424 NA NA 1 2452 #> 8449 TCGA-D3-A1Q6-06 1 2184 0 2184 NA NA 1 48 #> 8450 TCGA-D3-A1Q7-06 0 4053 0 4053 NA NA 1 921 #> 8451 TCGA-D3-A1Q8-06 1 854 1 854 NA NA 1 147 #> 8452 TCGA-D3-A1Q9-06 1 961 1 961 NA NA 1 44 #> 8453 TCGA-D3-A1QA-07 0 2765 0 2765 NA NA 1 1393 #> 8454 TCGA-D3-A1QA-06 0 2765 0 2765 NA NA 1 1393 #> 8455 TCGA-D3-A1QB-06 0 2912 0 2912 NA NA 1 0 #> 8456 TCGA-D3-A2J6-06 1 1321 1 1321 NA NA 1 448 #> 8457 TCGA-D3-A2J7-06 1 3136 1 3136 NA NA 1 13 #> 8458 TCGA-D3-A2J8-06 1 1992 1 1992 NA NA 1 1737 #> 8459 TCGA-D3-A2J9-06 1 723 1 723 NA NA 1 231 #> 8460 TCGA-D3-A2JA-06 0 3514 0 3514 NA NA 1 40 #> 8461 TCGA-D3-A2JB-06 NA NA NA NA NA NA NA NA #> 8462 TCGA-D3-A2JC-06 0 2639 0 2639 NA NA 0 2639 #> 8463 TCGA-D3-A2JD-06 1 361 1 361 NA NA 1 85 #> 8464 TCGA-D3-A2JE-06 1 841 1 841 NA NA 1 149 #> 8465 TCGA-D3-A2JF-06 0 1888 0 1888 NA NA 1 25 #> 8466 TCGA-D3-A2JG-06 1 3453 1 3453 NA NA 1 3279 #> 8467 TCGA-D3-A2JH-06 0 1280 0 1280 NA NA 1 569 #> 8468 TCGA-D3-A2JK-06 1 368 1 368 NA NA 1 261 #> 8469 TCGA-D3-A2JL-06 0 5219 0 5219 NA NA 1 2638 #> 8470 TCGA-D3-A2JN-06 1 2022 0 2022 NA NA 0 2022 #> 8471 TCGA-D3-A2JO-06 0 2010 0 2010 NA NA 1 50 #> 8472 TCGA-D3-A2JP-06 0 1812 0 1812 NA NA 1 227 #> 8473 TCGA-D3-A3BZ-06 0 3976 0 3976 NA NA 1 2340 #> 8474 TCGA-D3-A3C1-06 0 NA 0 NA NA NA 0 NA #> 8475 TCGA-D3-A3C3-06 0 NA 0 NA NA NA 0 NA #> 8476 TCGA-D3-A3C6-06 1 1766 1 1766 NA NA 1 1441 #> 8477 TCGA-D3-A3C7-06 0 1429 0 1429 NA NA 0 1429 #> 8478 TCGA-D3-A3C8-06 0 1409 0 1409 NA NA 1 55 #> 8479 TCGA-D3-A3CB-06 0 5065 0 5065 NA NA 0 5065 #> 8480 TCGA-D3-A3CC-06 0 2644 0 2644 NA NA 1 96 #> 8481 TCGA-D3-A3CE-06 1 1832 1 1832 NA NA 1 0 #> 8482 TCGA-D3-A3CF-06 1 746 1 746 NA NA 1 129 #> 8483 TCGA-D3-A3ML-06 1 422 1 422 NA NA 1 32 #> 8484 TCGA-D3-A3MO-06 1 284 1 284 NA NA 1 47 #> 8485 TCGA-D3-A3MR-06 0 3151 0 3151 NA NA 1 3108 #> 8486 TCGA-D3-A3MU-06 0 1209 0 1209 NA NA 1 750 #> 8487 TCGA-D3-A3MV-06 0 1378 0 1378 NA NA 1 16 #> 8488 TCGA-D3-A51E-06 0 5318 0 5318 NA NA 0 5318 #> 8489 TCGA-D3-A51F-06 0 1695 0 1695 NA NA 0 1695 #> 8490 TCGA-D3-A51G-06 NA NA NA NA NA NA NA NA #> 8491 TCGA-D3-A51J-06 0 4414 0 4414 NA NA 1 2008 #> 8492 TCGA-D3-A51K-06 0 1002 0 1002 NA NA 0 1002 #> 8493 TCGA-D3-A51N-06 0 688 0 688 NA NA 1 18 #> 8494 TCGA-D3-A51R-06 0 1941 0 1941 NA NA 1 1016 #> 8495 TCGA-D3-A51T-06 0 818 0 818 NA NA 1 210 #> 8496 TCGA-D3-A5GL-06 0 3826 0 3826 NA NA 1 1092 #> 8497 TCGA-D3-A5GN-06 0 4129 0 4129 NA NA 1 1279 #> 8498 TCGA-D3-A5GO-06 0 4195 0 4195 NA NA 1 757 #> 8499 TCGA-D3-A5GR-06 0 5424 0 5424 NA NA 1 0 #> 8500 TCGA-D3-A5GS-06 0 553 0 553 NA NA 1 44 #> 8501 TCGA-D3-A5GT-01 0 487 0 487 NA NA 1 291 #> 8502 TCGA-D3-A5GU-06 0 3808 0 3808 NA NA 1 3074 #> 8503 TCGA-D3-A8GB-06 1 938 1 938 NA NA 1 347 #> 8504 TCGA-D3-A8GC-06 1 2421 1 2421 NA NA 1 1859 #> 8505 TCGA-D3-A8GD-06 0 718 0 718 NA NA 1 147 #> 8506 TCGA-D3-A8GE-06 0 804 0 804 NA NA 1 59 #> 8507 TCGA-D3-A8GI-06 1 1780 1 1780 NA NA 1 50 #> 8508 TCGA-D3-A8GJ-06 0 7342 0 7342 NA NA 1 1443 #> 8509 TCGA-D3-A8GK-06 0 5177 0 5177 NA NA 1 1555 #> 8510 TCGA-D3-A8GL-06 1 2711 1 2711 NA NA 1 1333 #> 8511 TCGA-D3-A8GM-06 1 3259 0 3259 NA NA 0 3259 #> 8512 TCGA-D3-A8GN-06 0 4897 0 4897 NA NA 1 787 #> 8513 TCGA-D3-A8GO-06 1 NA 1 NA NA NA 1 NA #> 8514 TCGA-D3-A8GP-06 0 4646 0 4646 NA NA 1 535 #> 8515 TCGA-D3-A8GQ-06 1 884 1 884 NA NA 1 578 #> 8516 TCGA-D3-A8GR-06 NA NA NA NA NA NA NA NA #> 8517 TCGA-D3-A8GS-06 1 3564 1 3564 NA NA 1 2641 #> 8518 TCGA-D3-A8GV-06 1 5101 1 5101 NA NA 1 3896 #> 8519 TCGA-D9-A148-06 0 4609 0 4609 NA NA 1 4287 #> 8520 TCGA-D9-A149-06 0 1663 0 1663 NA NA 1 1290 #> 8521 TCGA-D9-A1JW-06 0 111 0 111 NA NA 1 10 #> 8522 TCGA-D9-A1JX-06 1 216 1 216 NA NA 1 195 #> 8523 TCGA-D9-A1X3-06 0 551 0 551 NA NA 0 551 #> 8524 TCGA-D9-A3Z1-06 1 468 1 468 NA NA 1 335 #> 8525 TCGA-D9-A3Z3-06 0 678 0 678 NA NA 0 678 #> 8526 TCGA-D9-A3Z4-01 1 519 1 519 NA NA 1 192 #> 8527 TCGA-D9-A4Z3-01 0 505 0 505 NA NA 1 100 #> 8528 TCGA-D9-A4Z5-01 0 218 0 218 NA NA 0 218 #> 8529 TCGA-D9-A4Z6-06 1 561 1 561 NA NA 1 213 #> 8530 TCGA-D9-A6E9-06 0 301 0 301 NA NA 0 301 #> 8531 TCGA-D9-A6EA-06 0 766 0 766 NA NA 0 766 #> 8532 TCGA-D9-A6EC-06 0 2359 0 2359 NA NA 0 2359 #> 8533 TCGA-D9-A6EG-06 1 698 NA 698 NA NA 1 398 #> 8534 TCGA-DA-A1HV-06 0 2329 0 2329 NA NA 1 866 #> 8535 TCGA-DA-A1HW-06 0 820 0 820 NA NA 1 852 #> 8536 TCGA-DA-A1HY-06 0 4407 0 4407 NA NA 0 4407 #> 8537 TCGA-DA-A1I0-06 1 620 1 620 NA NA 1 599 #> 8538 TCGA-DA-A1I1-06 0 6768 0 6768 NA NA 1 5591 #> 8539 TCGA-DA-A1I2-06 1 5370 1 5370 NA NA 1 4679 #> 8540 TCGA-DA-A1I4-06 1 1093 1 1093 NA NA 1 889 #> 8541 TCGA-DA-A1I5-06 0 4107 0 4107 NA NA 0 4107 #> 8542 TCGA-DA-A1I7-06 0 2703 0 2703 NA NA 1 755 #> 8543 TCGA-DA-A1I8-06 1 1640 1 1640 NA NA 1 961 #> 8544 TCGA-DA-A1IA-06 1 2005 1 2005 NA NA 1 2005 #> 8545 TCGA-DA-A1IB-06 0 825 0 825 NA NA 1 243 #> 8546 TCGA-DA-A1IC-06 1 2071 1 2071 NA NA 1 1930 #> 8547 TCGA-DA-A3F2-06 1 1032 1 1032 NA NA 1 430 #> 8548 TCGA-DA-A3F3-06 1 319 1 319 NA NA 1 319 #> 8549 TCGA-DA-A3F5-06 1 6873 1 6873 NA NA 1 6841 #> 8550 TCGA-DA-A3F8-06 0 1319 0 1319 NA NA 0 1319 #> 8551 TCGA-DA-A95V-06 0 2193 0 2193 NA NA 0 2193 #> 8552 TCGA-DA-A95W-06 0 1136 0 1136 NA NA 0 1136 #> 8553 TCGA-DA-A95X-06 0 2249 0 2249 NA NA 0 2249 #> 8554 TCGA-DA-A95Y-06 1 430 1 430 NA NA 1 338 #> 8555 TCGA-DA-A95Z-06 0 396 0 396 NA NA 0 396 #> 8556 TCGA-DA-A960-01 0 804 0 804 NA NA 0 804 #> 8557 TCGA-EB-A1NK-01 0 1039 0 1039 NA NA 0 1039 #> 8558 TCGA-EB-A24C-01 0 632 0 632 NA NA 1 465 #> 8559 TCGA-EB-A24D-01 0 645 0 645 NA NA 1 500 #> 8560 TCGA-EB-A299-01 0 378 0 378 NA NA 0 378 #> 8561 TCGA-EB-A3HV-01 0 39 0 39 NA NA 0 39 #> 8562 TCGA-EB-A3XB-01 0 796 0 796 NA NA 0 796 #> 8563 TCGA-EB-A3XC-01 0 650 0 650 NA NA 1 74 #> 8564 TCGA-EB-A3XD-01 0 1160 0 1160 NA NA 0 1160 #> 8565 TCGA-EB-A3XE-01 0 180 0 180 NA NA 0 180 #> 8566 TCGA-EB-A3XF-01 0 278 0 278 NA NA 0 278 #> 8567 TCGA-EB-A3Y6-01 0 126 0 126 NA NA 0 126 #> 8568 TCGA-EB-A3Y7-01 1 326 0 326 NA NA 0 326 #> 8569 TCGA-EB-A41A-01 0 262 0 262 NA NA 0 262 #> 8570 TCGA-EB-A41B-01 0 291 0 291 NA NA 0 291 #> 8571 TCGA-EB-A42Y-01 1 721 1 721 NA NA 1 721 #> 8572 TCGA-EB-A42Z-01 0 441 0 441 NA NA 0 441 #> 8573 TCGA-EB-A430-01 0 0 0 0 NA NA 0 0 #> 8574 TCGA-EB-A431-01 0 568 0 568 NA NA 0 568 #> 8575 TCGA-EB-A44N-01 1 205 1 205 NA NA 1 115 #> 8576 TCGA-EB-A44O-01 0 81 0 81 NA NA 1 60 #> 8577 TCGA-EB-A44P-01 0 741 0 741 NA NA 0 741 #> 8578 TCGA-EB-A44Q-06 0 422 0 422 NA NA 0 422 #> 8579 TCGA-EB-A44R-06 1 315 0 315 NA NA 0 315 #> 8580 TCGA-EB-A4IQ-01 1 636 0 636 NA NA 1 337 #> 8581 TCGA-EB-A4IS-01 0 774 0 774 NA NA 0 774 #> 8582 TCGA-EB-A4OY-01 0 977 0 977 NA NA 0 977 #> 8583 TCGA-EB-A4OZ-01 0 620 0 620 NA NA 0 620 #> 8584 TCGA-EB-A4P0-01 1 326 0 326 NA NA 0 326 #> 8585 TCGA-EB-A4XL-01 0 777 0 777 NA NA 0 777 #> 8586 TCGA-EB-A51B-01 0 931 0 931 NA NA 0 931 #> 8587 TCGA-EB-A550-01 1 264 0 264 NA NA 0 264 #> 8588 TCGA-EB-A551-01 0 590 0 590 NA NA 0 590 #> 8589 TCGA-EB-A553-01 0 226 0 226 NA NA 0 226 #> 8590 TCGA-EB-A57M-01 1 472 0 472 NA NA 0 472 #> 8591 TCGA-EB-A5FP-01 1 454 1 454 NA NA 1 24 #> 8592 TCGA-EB-A5KH-06 1 619 0 619 NA NA 0 619 #> 8593 TCGA-EB-A5SE-01 1 401 1 401 NA NA 1 367 #> 8594 TCGA-EB-A5SF-01 1 369 0 369 NA NA 0 369 #> 8595 TCGA-EB-A5SG-06 0 2076 0 2076 NA NA 1 1372 #> 8596 TCGA-EB-A5SH-06 0 1643 0 1643 NA NA 1 1065 #> 8597 TCGA-EB-A5UL-06 0 891 0 891 NA NA 0 891 #> 8598 TCGA-EB-A5UM-01 0 779 0 779 NA NA 0 779 #> 8599 TCGA-EB-A5UN-06 0 1792 0 1792 NA NA 1 1689 #> 8600 TCGA-EB-A5VU-01 1 321 1 321 NA NA 1 217 #> 8601 TCGA-EB-A5VV-06 0 214 0 214 NA NA 0 214 #> 8602 TCGA-EB-A6L9-06 0 1109 0 1109 NA NA 0 1109 #> 8603 TCGA-EB-A6QY-01 0 382 0 382 NA NA 1 36 #> 8604 TCGA-EB-A6QZ-01 1 352 1 352 NA NA 1 129 #> 8605 TCGA-EB-A6R0-01 1 608 0 608 NA NA 0 608 #> 8606 TCGA-EB-A82B-01 0 390 0 390 NA NA 0 390 #> 8607 TCGA-EB-A82C-01 0 17 0 17 NA NA 0 17 #> 8608 TCGA-EB-A85I-01 0 362 0 362 NA NA 0 362 #> 8609 TCGA-EB-A85J-01 0 360 0 360 NA NA 1 138 #> 8610 TCGA-EB-A97M-01 0 414 0 414 NA NA 0 414 #> 8611 TCGA-EE-A17X-06 1 907 1 907 NA NA 1 531 #> 8612 TCGA-EE-A17Y-06 1 828 1 828 NA NA 1 317 #> 8613 TCGA-EE-A17Z-06 1 263 1 263 NA NA 1 138 #> 8614 TCGA-EE-A180-06 1 2889 1 2889 NA NA 1 850 #> 8615 TCGA-EE-A181-06 1 1026 0 1026 NA NA 1 788 #> 8616 TCGA-EE-A182-06 1 447 1 447 NA NA 1 270 #> 8617 TCGA-EE-A183-06 NA NA NA NA NA NA NA NA #> 8618 TCGA-EE-A184-06 1 2073 NA 2073 NA NA 1 1309 #> 8619 TCGA-EE-A185-06 1 151 1 151 NA NA 1 85 #> 8620 TCGA-EE-A20B-06 0 4070 0 4070 NA NA 0 4070 #> 8621 TCGA-EE-A20C-06 NA NA NA NA NA NA NA NA #> 8622 TCGA-EE-A20F-06 0 2785 0 2785 NA NA 0 2785 #> 8623 TCGA-EE-A20H-06 1 5118 1 5118 NA NA 1 4667 #> 8624 TCGA-EE-A20I-06 1 412 1 412 NA NA 1 53 #> 8625 TCGA-EE-A29A-06 1 1927 1 1927 NA NA 1 867 #> 8626 TCGA-EE-A29B-06 1 2588 1 2588 NA NA 1 490 #> 8627 TCGA-EE-A29C-06 1 2402 1 2402 NA NA 1 204 #> 8628 TCGA-EE-A29D-06 1 425 NA 425 NA NA 0 425 #> 8629 TCGA-EE-A29E-06 0 1940 0 1940 NA NA 0 1940 #> 8630 TCGA-EE-A29G-06 1 2192 1 2192 NA NA 1 726 #> 8631 TCGA-EE-A29H-06 0 1966 0 1966 NA NA 1 1231 #> 8632 TCGA-EE-A29L-06 1 79 NA 79 NA NA 1 55 #> 8633 TCGA-EE-A29M-06 0 1729 0 1729 NA NA 0 1729 #> 8634 TCGA-EE-A29N-06 1 566 1 566 NA NA 1 478 #> 8635 TCGA-EE-A29P-06 0 1716 0 1716 NA NA 1 1668 #> 8636 TCGA-EE-A29Q-06 1 2030 1 2030 NA NA 1 1256 #> 8637 TCGA-EE-A29R-06 0 440 0 440 NA NA 1 426 #> 8638 TCGA-EE-A29S-06 1 1864 1 1864 NA NA 1 1418 #> 8639 TCGA-EE-A29T-06 0 11252 0 11252 NA NA 1 7483 #> 8640 TCGA-EE-A29V-06 1 787 1 787 NA NA 1 96 #> 8641 TCGA-EE-A29W-06 NA NA NA NA NA NA NA NA #> 8642 TCGA-EE-A29X-06 1 545 1 545 NA NA 1 391 #> 8643 TCGA-EE-A2A0-06 1 1424 1 1424 NA NA 1 1247 #> 8644 TCGA-EE-A2A1-06 0 3527 0 3527 NA NA 1 3488 #> 8645 TCGA-EE-A2A2-06 0 1814 0 1814 NA NA 0 1814 #> 8646 TCGA-EE-A2A5-06 1 1195 1 1195 NA NA 1 1028 #> 8647 TCGA-EE-A2A6-06 0 2620 0 2620 NA NA 1 1505 #> 8648 TCGA-EE-A2GB-06 0 1803 0 1803 NA NA 0 1803 #> 8649 TCGA-EE-A2GC-06 0 2051 0 2051 NA NA 0 2051 #> 8650 TCGA-EE-A2GD-06 1 10346 1 10346 NA NA 1 3689 #> 8651 TCGA-EE-A2GE-06 0 5286 0 5286 NA NA 1 5276 #> 8652 TCGA-EE-A2GH-06 0 6699 0 6699 NA NA 0 6699 #> 8653 TCGA-EE-A2GI-06 0 1482 0 1482 NA NA 0 1482 #> 8654 TCGA-EE-A2GJ-06 1 3266 1 3266 NA NA 1 733 #> 8655 TCGA-EE-A2GK-06 0 1665 0 1665 NA NA 1 1498 #> 8656 TCGA-EE-A2GL-06 0 2423 0 2423 NA NA 1 2329 #> 8657 TCGA-EE-A2GM-06 0 2296 0 2296 NA NA 1 1218 #> 8658 TCGA-EE-A2GN-06 1 3106 1 3106 NA NA 1 2422 #> 8659 TCGA-EE-A2GO-06 0 3857 0 3857 NA NA 1 2216 #> 8660 TCGA-EE-A2GP-06 1 423 1 423 NA NA 1 251 #> 8661 TCGA-EE-A2GR-06 1 1301 1 1301 NA NA 1 1301 #> 8662 TCGA-EE-A2GS-06 1 2470 1 2470 NA NA 1 1565 #> 8663 TCGA-EE-A2GT-06 0 1365 0 1365 NA NA 1 281 #> 8664 TCGA-EE-A2GU-06 0 2884 0 2884 NA NA 0 2884 #> 8665 TCGA-EE-A2M5-06 1 659 1 659 NA NA 1 537 #> 8666 TCGA-EE-A2M6-06 0 3932 0 3932 NA NA 0 3932 #> 8667 TCGA-EE-A2M7-06 1 877 1 877 NA NA 1 799 #> 8668 TCGA-EE-A2M8-06 1 601 1 601 NA NA 1 498 #> 8669 TCGA-EE-A2MC-06 1 1871 0 1871 NA NA 1 896 #> 8670 TCGA-EE-A2MD-06 1 1438 1 1438 NA NA 1 1344 #> 8671 TCGA-EE-A2ME-06 1 3141 1 3141 NA NA 1 2703 #> 8672 TCGA-EE-A2MF-06 1 8174 1 8174 NA NA 1 8071 #> 8673 TCGA-EE-A2MG-06 1 3139 1 3139 NA NA 1 2585 #> 8674 TCGA-EE-A2MH-06 1 516 1 516 NA NA 1 440 #> 8675 TCGA-EE-A2MI-06 1 6225 1 6225 NA NA 1 2673 #> 8676 TCGA-EE-A2MJ-06 1 2927 0 2927 NA NA 1 396 #> 8677 TCGA-EE-A2MK-06 0 5487 0 5487 NA NA 0 5487 #> 8678 TCGA-EE-A2ML-06 1 6590 1 6590 NA NA 1 4983 #> 8679 TCGA-EE-A2MM-06 1 5107 1 5107 NA NA 1 1357 #> 8680 TCGA-EE-A2MN-06 1 1446 1 1446 NA NA 1 969 #> 8681 TCGA-EE-A2MP-06 0 7563 0 7563 NA NA 1 365 #> 8682 TCGA-EE-A2MQ-06 1 1315 1 1315 NA NA 1 986 #> 8683 TCGA-EE-A2MR-06 0 4088 0 4088 NA NA 1 3136 #> 8684 TCGA-EE-A2MS-06 0 4942 0 4942 NA NA 1 1883 #> 8685 TCGA-EE-A2MT-06 0 2166 0 2166 NA NA 0 2166 #> 8686 TCGA-EE-A2MU-06 0 1620 0 1620 NA NA 0 1620 #> 8687 TCGA-EE-A3AA-06 0 3781 0 3781 NA NA 0 3781 #> 8688 TCGA-EE-A3AB-06 0 3733 0 3733 NA NA 0 3733 #> 8689 TCGA-EE-A3AC-06 0 1948 0 1948 NA NA 0 1948 #> 8690 TCGA-EE-A3AD-06 1 875 1 875 NA NA 1 554 #> 8691 TCGA-EE-A3AE-06 0 1658 0 1658 NA NA 0 1658 #> 8692 TCGA-EE-A3AF-06 1 420 1 420 NA NA 1 201 #> 8693 TCGA-EE-A3AG-06 1 1265 1 1265 NA NA 1 229 #> 8694 TCGA-EE-A3AH-06 1 4222 1 4222 NA NA 1 1981 #> 8695 TCGA-EE-A3J3-06 1 5237 1 5237 NA NA 1 4523 #> 8696 TCGA-EE-A3J4-06 1 3869 1 3869 NA NA 1 1429 #> 8697 TCGA-EE-A3J5-06 1 1124 1 1124 NA NA 1 467 #> 8698 TCGA-EE-A3J7-06 0 1949 0 1949 NA NA 1 1270 #> 8699 TCGA-EE-A3J8-06 1 1044 0 1044 NA NA 1 1035 #> 8700 TCGA-EE-A3JA-06 1 1618 1 1618 NA NA 1 539 #> 8701 TCGA-EE-A3JB-06 0 6138 0 6138 NA NA 1 1434 #> 8702 TCGA-EE-A3JD-06 1 832 1 832 NA NA 1 364 #> 8703 TCGA-EE-A3JE-06 0 1562 0 1562 NA NA 1 194 #> 8704 TCGA-EE-A3JH-06 0 4086 0 4086 NA NA 1 537 #> 8705 TCGA-EE-A3JI-06 1 4648 1 4648 NA NA 1 725 #> 8706 TCGA-ER-A193-06 1 955 1 955 NA NA 1 806 #> 8707 TCGA-ER-A194-01 1 1354 1 1354 NA NA 1 1354 #> 8708 TCGA-ER-A195-06 1 1078 1 1078 NA NA 1 1078 #> 8709 TCGA-ER-A196-01 0 1785 0 1785 NA NA 0 1785 #> 8710 TCGA-ER-A197-06 1 424 1 424 NA NA 1 110 #> 8711 TCGA-ER-A198-06 1 1544 1 1544 NA NA 1 0 #> 8712 TCGA-ER-A199-06 1 279 1 279 NA NA 1 119 #> 8713 TCGA-ER-A19A-06 0 2365 0 2365 NA NA 1 1617 #> 8714 TCGA-ER-A19B-06 1 2993 1 2993 NA NA 1 829 #> 8715 TCGA-ER-A19C-06 1 1487 1 1487 NA NA 1 1487 #> 8716 TCGA-ER-A19D-06 1 383 1 383 NA NA 1 357 #> 8717 TCGA-ER-A19E-06 1 396 1 396 NA NA 1 64 #> 8718 TCGA-ER-A19F-06 1 802 0 802 NA NA 0 802 #> 8719 TCGA-ER-A19G-06 0 9188 0 9188 NA NA 0 9188 #> 8720 TCGA-ER-A19H-06 1 4634 0 4634 NA NA 0 4634 #> 8721 TCGA-ER-A19J-06 1 196 1 196 NA NA 1 98 #> 8722 TCGA-ER-A19K-01 1 469 1 469 NA NA 1 211 #> 8723 TCGA-ER-A19L-06 1 4000 1 4000 NA NA 1 3689 #> 8724 TCGA-ER-A19M-06 1 1857 1 1857 NA NA 1 1152 #> 8725 TCGA-ER-A19N-06 1 1341 0 1341 NA NA 1 0 #> 8726 TCGA-ER-A19O-06 1 NA 1 NA NA NA 1 308 #> 8727 TCGA-ER-A19P-06 1 4930 1 4930 NA NA 1 4352 #> 8728 TCGA-ER-A19Q-06 1 1548 1 1548 NA NA 1 1259 #> 8729 TCGA-ER-A19S-06 0 1505 0 1505 NA NA 0 1505 #> 8730 TCGA-ER-A19T-06 1 270 1 270 NA NA 1 118 #> 8731 TCGA-ER-A19T-01 1 270 1 270 NA NA 1 118 #> 8732 TCGA-ER-A19W-06 1 4507 1 4507 NA NA 1 4126 #> 8733 TCGA-ER-A1A1-06 0 3196 0 3196 NA NA 1 1971 #> 8734 TCGA-ER-A2NB-01 1 857 1 857 NA NA 1 461 #> 8735 TCGA-ER-A2NC-06 1 1333 1 1333 NA NA 1 1157 #> 8736 TCGA-ER-A2ND-06 1 710 1 710 NA NA 1 710 #> 8737 TCGA-ER-A2NE-06 NA NA NA NA NA NA NA NA #> 8738 TCGA-ER-A2NF-06 1 877 1 877 NA NA 1 230 #> 8739 TCGA-ER-A2NF-01 1 877 1 877 NA NA 1 230 #> 8740 TCGA-ER-A2NG-06 1 1490 1 1490 NA NA 1 766 #> 8741 TCGA-ER-A2NH-06 0 1264 0 1264 NA NA 0 1264 #> 8742 TCGA-ER-A3ES-06 1 7514 1 7514 NA NA 1 7514 #> 8743 TCGA-ER-A3ET-06 1 2829 1 2829 NA NA 1 2435 #> 8744 TCGA-ER-A3EV-06 1 1429 1 1429 NA NA 1 728 #> 8745 TCGA-ER-A3PL-06 0 1010 0 1010 NA NA 1 945 #> 8746 TCGA-ER-A42H-01 1 426 1 426 NA NA 1 259 #> 8747 TCGA-ER-A42K-06 1 394 1 394 NA NA 1 206 #> 8748 TCGA-ER-A42L-06 0 4533 0 4533 NA NA 1 3812 #> 8749 TCGA-FR-A2OS-01 1 368 1 368 NA NA 1 283 #> 8750 TCGA-FR-A3R1-01 0 685 0 685 NA NA 1 678 #> 8751 TCGA-FR-A3YN-06 0 2828 0 2828 NA NA 0 2828 #> 8752 TCGA-FR-A3YO-06 0 NA 0 NA NA NA 0 NA #> 8753 TCGA-FR-A44A-06 0 5299 0 5299 NA NA 0 5299 #> 8754 TCGA-FR-A69P-06 0 478 0 478 NA NA 1 274 #> 8755 TCGA-FR-A726-01 1 305 1 305 NA NA 1 273 #> 8756 TCGA-FR-A728-01 0 583 0 583 NA NA 1 64 #> 8757 TCGA-FR-A729-06 0 6716 0 6716 NA NA 1 6299 #> 8758 TCGA-FR-A7U8-06 0 847 0 847 NA NA 1 567 #> 8759 TCGA-FR-A7U9-06 0 571 0 571 NA NA 1 95 #> 8760 TCGA-FR-A7UA-06 0 1164 0 1164 NA NA 0 1164 #> 8761 TCGA-FR-A8YC-06 1 1059 1 1059 NA NA 1 1059 #> 8762 TCGA-FR-A8YD-06 1 1103 1 1103 NA NA 1 1103 #> 8763 TCGA-FR-A8YE-06 0 3176 0 3176 NA NA 0 3176 #> 8764 TCGA-FS-A1YW-06 1 6598 1 6598 NA NA 1 6598 #> 8765 TCGA-FS-A1YX-06 1 1478 1 1478 NA NA 1 1478 #> 8766 TCGA-FS-A1YY-06 1 6953 1 6953 NA NA 1 6777 #> 8767 TCGA-FS-A1Z0-06 1 6164 1 6164 NA NA 1 5503 #> 8768 TCGA-FS-A1Z3-06 1 636 1 636 NA NA 1 276 #> 8769 TCGA-FS-A1Z4-06 1 854 1 854 NA NA 1 854 #> 8770 TCGA-FS-A1Z7-06 1 237 1 237 NA NA 1 136 #> 8771 TCGA-FS-A1ZA-06 1 843 1 843 NA NA 1 663 #> 8772 TCGA-FS-A1ZB-06 1 1486 1 1486 NA NA 1 1461 #> 8773 TCGA-FS-A1ZC-06 1 10870 1 10870 NA NA 1 10334 #> 8774 TCGA-FS-A1ZD-06 1 1628 1 1628 NA NA 1 1497 #> 8775 TCGA-FS-A1ZE-06 1 1413 1 1413 NA NA 1 761 #> 8776 TCGA-FS-A1ZF-06 1 470 1 470 NA NA 1 470 #> 8777 TCGA-FS-A1ZG-06 1 295 1 295 NA NA 1 140 #> 8778 TCGA-FS-A1ZH-06 1 996 1 996 NA NA 1 577 #> 8779 TCGA-FS-A1ZJ-06 1 1441 1 1441 NA NA 1 1225 #> 8780 TCGA-FS-A1ZK-06 1 728 1 728 NA NA 1 367 #> 8781 TCGA-FS-A1ZM-06 0 3080 0 3080 NA NA 0 3080 #> 8782 TCGA-FS-A1ZN-01 1 730 1 730 NA NA 1 361 #> 8783 TCGA-FS-A1ZP-06 1 2273 1 2273 NA NA 1 2273 #> 8784 TCGA-FS-A1ZQ-06 1 4062 1 4062 NA NA 1 3940 #> 8785 TCGA-FS-A1ZR-06 1 347 1 347 NA NA 1 152 #> 8786 TCGA-FS-A1ZS-06 0 4526 0 4526 NA NA 1 2861 #> 8787 TCGA-FS-A1ZT-06 0 1617 0 1617 NA NA 0 1617 #> 8788 TCGA-FS-A1ZU-06 1 808 1 808 NA NA 1 679 #> 8789 TCGA-FS-A1ZW-06 0 1505 0 1505 NA NA 0 1505 #> 8790 TCGA-FS-A1ZY-06 1 824 1 824 NA NA 1 824 #> 8791 TCGA-FS-A1ZZ-06 1 822 1 822 NA NA 1 822 #> 8792 TCGA-FS-A4F0-06 0 2367 0 2367 NA NA 1 872 #> 8793 TCGA-FS-A4F2-06 1 1525 1 1525 NA NA 1 1525 #> 8794 TCGA-FS-A4F4-06 1 2028 1 2028 NA NA 1 2028 #> 8795 TCGA-FS-A4F5-06 1 874 1 874 NA NA 1 874 #> 8796 TCGA-FS-A4F8-06 1 5318 1 5318 NA NA 1 5318 #> 8797 TCGA-FS-A4F9-06 0 1035 0 1035 NA NA 1 376 #> 8798 TCGA-FS-A4FB-06 1 813 1 813 NA NA 1 813 #> 8799 TCGA-FS-A4FC-06 1 1655 1 1655 NA NA 1 1655 #> 8800 TCGA-FS-A4FD-06 1 2454 1 2454 NA NA 1 2010 #> 8801 TCGA-FW-A3I3-06 0 531 0 531 NA NA 0 531 #> 8802 TCGA-FW-A3R5-06 0 1124 0 1124 NA NA 0 1124 #> 8803 TCGA-FW-A3TU-06 1 1691 1 1691 NA NA 1 1691 #> 8804 TCGA-FW-A3TV-06 0 411 0 411 NA NA 1 139 #> 8805 TCGA-FW-A5DX-01 0 640 0 640 NA NA 0 640 #> 8806 TCGA-FW-A5DY-06 0 587 0 587 NA NA 0 587 #> 8807 TCGA-GF-A2C7-01 0 21 0 21 NA NA 0 21 #> 8808 TCGA-GF-A3OT-06 0 301 0 301 NA NA 1 248 #> 8809 TCGA-GF-A4EO-06 0 591 0 591 NA NA 0 591 #> 8810 TCGA-GF-A6C8-06 0 62 0 62 NA NA 0 62 #> 8811 TCGA-GF-A6C9-06 0 480 0 480 NA NA 0 480 #> 8812 TCGA-GF-A769-01 1 1070 1 1070 NA NA 1 1070 #> 8813 TCGA-GN-A262-06 0 4255 0 4255 NA NA 1 2908 #> 8814 TCGA-GN-A263-01 1 467 1 467 NA NA 1 39 #> 8815 TCGA-GN-A264-06 1 3587 1 3587 NA NA 1 3221 #> 8816 TCGA-GN-A265-06 0 2948 0 2948 NA NA 1 99 #> 8817 TCGA-GN-A266-06 1 308 1 308 NA NA 1 109 #> 8818 TCGA-GN-A267-06 1 1960 1 1960 NA NA 1 456 #> 8819 TCGA-GN-A268-06 1 1910 1 1910 NA NA 1 908 #> 8820 TCGA-GN-A26A-06 1 988 1 988 NA NA 1 750 #> 8821 TCGA-GN-A26C-01 1 821 1 821 NA NA 1 593 #> 8822 TCGA-GN-A26D-06 1 1460 1 1460 NA NA 1 622 #> 8823 TCGA-GN-A4U3-06 0 3708 0 3708 NA NA 1 2274 #> 8824 TCGA-GN-A4U4-06 0 1197 0 1197 NA NA 1 217 #> 8825 TCGA-GN-A4U5-01 0 1156 0 1156 NA NA 0 1156 #> 8826 TCGA-GN-A4U7-06 1 317 1 317 NA NA 1 183 #> 8827 TCGA-GN-A4U8-06 0 1487 0 1487 NA NA 0 1487 #> 8828 TCGA-GN-A4U8-11 0 1487 0 1487 NA NA 0 1487 #> 8829 TCGA-GN-A4U9-06 1 673 1 673 NA NA 1 151 #> 8830 TCGA-GN-A8LK-06 1 1524 1 1524 NA NA 1 436 #> 8831 TCGA-GN-A8LL-06 1 650 1 650 NA NA 1 650 #> 8832 TCGA-GN-A8LN-01 0 772 0 772 NA NA 1 186 #> 8833 TCGA-GN-A9SD-06 1 1807 1 1807 NA NA 1 1137 #> 8834 TCGA-HR-A2OG-06 0 7 0 7 NA NA 0 7 #> 8835 TCGA-HR-A2OH-06 1 2004 1 2004 NA NA 1 2004 #> 8836 TCGA-HR-A5NC-01 0 1000 0 1000 NA NA 1 154 #> 8837 TCGA-IH-A3EA-01 0 524 0 524 NA NA 1 314 #> 8838 TCGA-LH-A9QB-06 0 11217 0 11217 NA NA 0 11217 #> 8839 TCGA-OD-A75X-06 1 9061 1 9061 NA NA 1 8987 #> 8840 TCGA-QB-A6FS-06 0 220 0 220 NA NA 1 63 #> 8841 TCGA-QB-AA9O-06 1 549 1 549 NA NA 1 549 #> 8842 TCGA-RP-A690-06 0 6 0 6 NA NA 0 6 #> 8843 TCGA-RP-A693-06 0 10 0 10 NA NA 0 10 #> 8844 TCGA-RP-A694-06 0 21 0 21 NA NA 0 21 #> 8845 TCGA-RP-A695-06 0 NA 0 NA NA NA 0 NA #> 8846 TCGA-RP-A6K9-06 0 NA 0 NA NA NA 0 NA #> 8847 TCGA-W3-A825-06 1 1917 1 1917 NA NA 1 1917 #> 8848 TCGA-W3-A828-06 1 3683 NA 3683 NA NA 0 3683 #> 8849 TCGA-W3-AA1O-06 1 122 1 122 NA NA 1 122 #> 8850 TCGA-W3-AA1Q-06 1 2101 1 2101 NA NA 1 1066 #> 8851 TCGA-W3-AA1R-06 1 3379 1 3379 NA NA 1 1037 #> 8852 TCGA-W3-AA1V-06 1 1280 1 1280 NA NA 1 1219 #> 8853 TCGA-W3-AA1W-06 0 6666 0 6666 NA NA 1 335 #> 8854 TCGA-W3-AA21-06 1 3195 1 3195 NA NA 1 2952 #> 8855 TCGA-WE-A8JZ-06 0 731 0 731 NA NA 0 731 #> 8856 TCGA-WE-A8K1-06 0 1492 0 1492 NA NA 0 1492 #> 8857 TCGA-WE-A8K4-01 0 614 0 614 NA NA 0 614 #> 8858 TCGA-WE-A8K5-06 1 1860 1 1860 NA NA 1 1498 #> 8859 TCGA-WE-A8K6-06 0 546 0 546 NA NA 1 256 #> 8860 TCGA-WE-A8ZM-06 0 3082 0 3082 NA NA 1 646 #> 8861 TCGA-WE-A8ZN-06 0 1794 0 1794 NA NA 1 1449 #> 8862 TCGA-WE-A8ZO-06 0 2145 0 2145 NA NA 1 1371 #> 8863 TCGA-WE-A8ZQ-06 0 1923 0 1923 NA NA 1 1757 #> 8864 TCGA-WE-A8ZR-06 1 274 1 274 NA NA 1 126 #> 8865 TCGA-WE-A8ZT-06 0 359 0 359 NA NA 1 69 #> 8866 TCGA-WE-A8ZX-06 0 1089 0 1089 NA NA 1 326 #> 8867 TCGA-WE-A8ZY-06 1 1506 1 1506 NA NA 1 1389 #> 8868 TCGA-WE-AA9Y-06 0 370 0 370 NA NA 0 370 #> 8869 TCGA-WE-AAA0-06 0 1229 0 1229 NA NA 1 650 #> 8870 TCGA-WE-AAA3-06 0 651 0 651 NA NA 0 651 #> 8871 TCGA-WE-AAA4-06 0 760 0 760 NA NA 1 523 #> 8872 TCGA-XV-A9VZ-01 0 11 0 11 NA NA 0 11 #> 8873 TCGA-XV-A9W2-01 0 417 0 417 NA NA 0 417 #> 8874 TCGA-XV-A9W5-01 0 392 0 392 NA NA 0 392 #> 8875 TCGA-XV-AAZV-01 0 412 0 412 NA NA 0 412 #> 8876 TCGA-XV-AAZW-01 1 393 1 393 NA NA 1 393 #> 8877 TCGA-XV-AAZY-01 0 405 0 405 NA NA 0 405 #> 8878 TCGA-XV-AB01-06 0 403 0 403 NA NA 0 403 #> 8879 TCGA-YD-A89C-06 0 210 0 210 NA NA 0 210 #> 8880 TCGA-YD-A9TA-06 0 1496 0 1496 NA NA 0 1496 #> 8881 TCGA-YD-A9TB-06 0 NA 0 NA NA NA 0 NA #> 8882 TCGA-YG-AA3N-01 0 306 0 306 NA NA 0 306 #> 8883 TCGA-YG-AA3O-06 1 1154 1 1154 NA NA 1 999 #> 8884 TCGA-YG-AA3P-06 0 439 0 439 NA NA 0 439 #> 8885 TCGA-Z2-A8RT-06 0 839 0 839 NA NA 0 839 #> 8886 TCGA-Z2-AA3S-06 0 2950 0 2950 NA NA 1 2727 #> 8887 TCGA-Z2-AA3V-06 0 486 0 486 NA NA 0 486 #> 8888 TCGA-3M-AB46-01 0 1765 0 1765 0 1765 0 1765 #> 8889 TCGA-3M-AB47-01 1 NA 1 NA NA NA 1 395 #> 8890 TCGA-B7-5816-01 0 812 0 812 0 812 0 812 #> 8891 TCGA-B7-5818-01 0 356 0 356 NA NA 0 356 #> 8892 TCGA-B7-A5TI-01 0 595 0 595 0 595 0 595 #> 8893 TCGA-B7-A5TJ-01 0 335 0 335 0 335 0 335 #> 8894 TCGA-B7-A5TK-01 0 288 0 288 0 288 0 288 #> 8895 TCGA-B7-A5TN-01 0 287 0 287 0 287 0 287 #> 8896 TCGA-BR-4187-01 1 141 NA 141 NA NA 0 141 #> 8897 TCGA-BR-4191-01 1 558 NA 558 NA NA 0 558 #> 8898 TCGA-BR-4201-01 1 940 NA 940 NA NA 0 940 #> 8899 TCGA-BR-4253-01 1 124 NA 124 NA NA 0 124 #> 8900 TCGA-BR-4255-01 1 124 NA 124 NA NA 0 124 #> 8901 TCGA-BR-4256-01 1 284 NA 284 NA NA 0 284 #> 8902 TCGA-BR-4257-01 1 294 NA 294 NA NA 0 294 #> 8903 TCGA-BR-4267-01 1 188 NA 188 NA NA 0 188 #> 8904 TCGA-BR-4279-01 1 291 NA 291 NA NA 0 291 #> 8905 TCGA-BR-4280-01 1 201 NA 201 NA NA 0 201 #> 8906 TCGA-BR-4292-01 0 0 0 0 NA NA 0 0 #> 8907 TCGA-BR-4294-01 0 0 0 0 NA NA 0 0 #> 8908 TCGA-BR-4357-01 0 0 0 0 NA NA 0 0 #> 8909 TCGA-BR-4361-01 0 0 0 0 NA NA 0 0 #> 8910 TCGA-BR-4362-01 0 0 0 0 NA NA 0 0 #> 8911 TCGA-BR-4363-01 0 0 0 0 NA NA 0 0 #> 8912 TCGA-BR-4366-01 0 0 0 0 NA NA 0 0 #> 8913 TCGA-BR-4367-01 0 0 0 0 NA NA 0 0 #> 8914 TCGA-BR-4368-01 0 0 0 0 NA NA 0 0 #> 8915 TCGA-BR-4369-01 0 0 0 0 NA NA 0 0 #> 8916 TCGA-BR-4370-01 0 0 0 0 NA NA 0 0 #> 8917 TCGA-BR-4371-01 0 0 0 0 NA NA 0 0 #> 8918 TCGA-BR-6452-01 0 1055 0 1055 0 1055 0 1055 #> 8919 TCGA-BR-6453-01 0 485 0 485 0 485 0 485 #> 8920 TCGA-BR-6453-11 0 485 0 485 0 485 0 485 #> 8921 TCGA-BR-6454-01 0 0 0 0 NA NA 0 0 #> 8922 TCGA-BR-6454-11 0 0 0 0 NA NA 0 0 #> 8923 TCGA-BR-6455-01 1 422 1 422 NA NA 1 385 #> 8924 TCGA-BR-6456-01 1 526 0 526 0 526 0 526 #> 8925 TCGA-BR-6457-01 0 416 0 416 0 416 0 416 #> 8926 TCGA-BR-6457-11 0 416 0 416 0 416 0 416 #> 8927 TCGA-BR-6458-01 1 588 1 588 1 574 1 574 #> 8928 TCGA-BR-6458-11 1 588 1 588 1 574 1 574 #> 8929 TCGA-BR-6563-01 0 1190 0 1190 0 1190 1 148 #> 8930 TCGA-BR-6564-01 1 794 0 794 0 794 0 794 #> 8931 TCGA-BR-6564-11 1 794 0 794 0 794 0 794 #> 8932 TCGA-BR-6565-01 1 279 1 279 NA NA 1 279 #> 8933 TCGA-BR-6566-01 0 997 0 997 0 997 0 997 #> 8934 TCGA-BR-6705-01 1 779 1 779 NA NA 1 779 #> 8935 TCGA-BR-6706-01 1 549 1 549 1 402 1 402 #> 8936 TCGA-BR-6707-01 0 491 0 491 1 426 1 426 #> 8937 TCGA-BR-6709-01 1 370 1 370 NA NA 1 370 #> 8938 TCGA-BR-6710-01 0 273 0 273 0 273 0 273 #> 8939 TCGA-BR-6801-01 0 1223 0 1223 0 1223 0 1223 #> 8940 TCGA-BR-6802-01 0 940 0 940 1 807 1 807 #> 8941 TCGA-BR-6802-11 0 940 0 940 1 807 1 807 #> 8942 TCGA-BR-6803-01 0 949 0 949 0 949 0 949 #> 8943 TCGA-BR-6852-01 0 1367 0 1367 0 1367 0 1367 #> 8944 TCGA-BR-6852-11 0 1367 0 1367 0 1367 0 1367 #> 8945 TCGA-BR-7196-01 0 666 0 666 NA NA 1 348 #> 8946 TCGA-BR-7197-01 0 280 0 280 0 280 0 280 #> 8947 TCGA-BR-7703-01 0 1100 0 1100 0 1100 0 1100 #> 8948 TCGA-BR-7703-11 0 1100 0 1100 0 1100 0 1100 #> 8949 TCGA-BR-7704-01 0 1072 0 1072 0 1072 0 1072 #> 8950 TCGA-BR-7704-11 0 1072 0 1072 0 1072 0 1072 #> 8951 TCGA-BR-7707-01 0 1090 0 1090 0 1090 0 1090 #> 8952 TCGA-BR-7715-01 0 1023 0 1023 0 1023 0 1023 #> 8953 TCGA-BR-7715-11 0 1023 0 1023 0 1023 0 1023 #> 8954 TCGA-BR-7716-01 0 1210 0 1210 0 1210 0 1210 #> 8955 TCGA-BR-7716-11 0 1210 0 1210 0 1210 0 1210 #> 8956 TCGA-BR-7717-01 1 552 0 552 NA NA 0 552 #> 8957 TCGA-BR-7717-11 1 552 0 552 NA NA 0 552 #> 8958 TCGA-BR-7722-01 1 466 0 466 0 466 0 466 #> 8959 TCGA-BR-7723-01 1 874 1 874 1 559 1 559 #> 8960 TCGA-BR-7851-01 1 NA 0 NA 0 NA 0 NA #> 8961 TCGA-BR-7851-11 1 NA 0 NA 0 NA 0 NA #> 8962 TCGA-BR-7901-01 1 105 0 105 1 91 1 91 #> 8963 TCGA-BR-7957-01 1 276 0 276 NA NA 0 276 #> 8964 TCGA-BR-7958-01 0 899 0 899 0 899 0 899 #> 8965 TCGA-BR-7959-01 0 1010 0 1010 0 1010 0 1010 #> 8966 TCGA-BR-8058-01 0 1133 0 1133 0 1133 1 89 #> 8967 TCGA-BR-8059-01 1 439 0 439 0 439 0 439 #> 8968 TCGA-BR-8060-01 1 348 0 348 0 348 0 348 #> 8969 TCGA-BR-8060-11 1 348 0 348 0 348 0 348 #> 8970 TCGA-BR-8077-01 0 21 0 21 0 21 0 21 #> 8971 TCGA-BR-8078-01 0 900 0 900 0 900 0 900 #> 8972 TCGA-BR-8080-01 1 292 0 292 0 292 0 292 #> 8973 TCGA-BR-8081-01 0 981 0 981 0 981 0 981 #> 8974 TCGA-BR-8284-01 1 245 0 245 0 245 0 245 #> 8975 TCGA-BR-8286-01 0 895 0 895 0 895 0 895 #> 8976 TCGA-BR-8289-01 1 81 0 81 NA NA 0 81 #> 8977 TCGA-BR-8291-01 1 607 0 607 0 607 0 607 #> 8978 TCGA-BR-8295-01 1 67 1 67 NA NA 1 67 #> 8979 TCGA-BR-8296-01 1 474 1 474 NA NA 1 390 #> 8980 TCGA-BR-8297-01 0 225 0 225 NA NA 0 225 #> 8981 TCGA-BR-8361-01 0 946 0 946 0 946 0 946 #> 8982 TCGA-BR-8362-01 1 398 1 398 1 356 1 356 #> 8983 TCGA-BR-8363-01 1 8 0 8 0 8 0 8 #> 8984 TCGA-BR-8364-01 0 675 0 675 0 675 0 675 #> 8985 TCGA-BR-8365-01 1 533 1 533 NA NA 1 533 #> 8986 TCGA-BR-8366-01 0 29 0 29 0 29 0 29 #> 8987 TCGA-BR-8367-01 1 801 1 801 1 580 1 580 #> 8988 TCGA-BR-8368-01 0 131 0 131 0 131 0 131 #> 8989 TCGA-BR-8369-01 0 427 0 427 1 419 1 419 #> 8990 TCGA-BR-8371-01 1 359 1 359 NA NA 1 357 #> 8991 TCGA-BR-8372-01 0 951 0 951 0 951 0 951 #> 8992 TCGA-BR-8373-01 0 450 0 450 0 450 0 450 #> 8993 TCGA-BR-8380-01 0 21 0 21 1 467 1 467 #> 8994 TCGA-BR-8381-01 0 224 0 224 0 224 0 224 #> 8995 TCGA-BR-8382-01 1 762 0 762 0 762 0 762 #> 8996 TCGA-BR-8384-01 0 113 0 113 0 113 0 113 #> 8997 TCGA-BR-8483-01 0 164 0 164 NA NA 0 164 #> 8998 TCGA-BR-8484-01 1 766 0 766 0 766 0 766 #> 8999 TCGA-BR-8485-01 0 280 0 280 0 280 0 280 #> 9000 TCGA-BR-8486-01 0 615 0 615 0 615 0 615 #> 9001 TCGA-BR-8487-01 0 34 0 34 0 34 0 34 #> 9002 TCGA-BR-8588-01 0 389 0 389 0 389 0 389 #> 9003 TCGA-BR-8589-01 0 825 0 825 0 825 0 825 #> 9004 TCGA-BR-8590-01 1 284 1 284 1 223 1 223 #> 9005 TCGA-BR-8591-01 0 856 0 856 0 856 0 856 #> 9006 TCGA-BR-8592-01 1 191 0 191 0 191 0 191 #> 9007 TCGA-BR-8676-01 0 229 0 229 0 229 0 229 #> 9008 TCGA-BR-8677-01 0 813 0 813 0 813 0 813 #> 9009 TCGA-BR-8678-01 0 754 0 754 0 754 0 754 #> 9010 TCGA-BR-8679-01 0 0 0 0 0 0 0 0 #> 9011 TCGA-BR-8680-01 0 972 0 972 NA NA 0 972 #> 9012 TCGA-BR-8682-01 0 991 0 991 0 991 0 991 #> 9013 TCGA-BR-8683-01 1 300 0 300 0 300 0 300 #> 9014 TCGA-BR-8686-01 1 635 0 635 0 635 0 635 #> 9015 TCGA-BR-8687-01 1 250 1 250 NA NA 1 250 #> 9016 TCGA-BR-8690-01 0 325 0 325 0 325 0 325 #> 9017 TCGA-BR-A44T-01 0 1038 0 1038 1 682 1 682 #> 9018 TCGA-BR-A44U-01 1 422 0 422 0 422 0 422 #> 9019 TCGA-BR-A452-01 1 229 0 229 0 229 0 229 #> 9020 TCGA-BR-A453-01 1 185 0 185 NA NA 0 185 #> 9021 TCGA-BR-A4CR-01 0 0 0 0 0 0 0 0 #> 9022 TCGA-BR-A4CS-01 1 45 0 45 0 45 0 45 #> 9023 TCGA-BR-A4IU-01 0 838 0 838 0 838 0 838 #> 9024 TCGA-BR-A4IV-01 1 869 1 869 1 737 1 737 #> 9025 TCGA-BR-A4IY-01 0 392 0 392 0 392 0 392 #> 9026 TCGA-BR-A4IZ-01 1 273 0 273 NA NA 0 273 #> 9027 TCGA-BR-A4J1-01 1 22 NA 22 NA NA 0 22 #> 9028 TCGA-BR-A4J2-01 0 431 0 431 0 431 0 431 #> 9029 TCGA-BR-A4J4-01 0 16 0 16 NA NA 0 16 #> 9030 TCGA-BR-A4J5-01 0 862 0 862 0 862 0 862 #> 9031 TCGA-BR-A4J6-01 0 20 0 20 0 20 0 20 #> 9032 TCGA-BR-A4J7-01 0 989 0 989 0 989 0 989 #> 9033 TCGA-BR-A4J8-01 0 411 0 411 0 411 0 411 #> 9034 TCGA-BR-A4J9-01 0 14 0 14 0 14 0 14 #> 9035 TCGA-BR-A4PD-01 0 628 0 628 0 628 0 628 #> 9036 TCGA-BR-A4PE-01 0 621 0 621 0 621 0 621 #> 9037 TCGA-BR-A4PF-01 0 35 0 35 0 35 0 35 #> 9038 TCGA-BR-A4QI-01 1 652 1 652 1 383 1 383 #> 9039 TCGA-BR-A4QL-01 1 491 0 491 0 491 0 491 #> 9040 TCGA-BR-A4QM-01 0 156 0 156 1 127 1 127 #> 9041 TCGA-CD-5798-01 0 408 0 408 0 408 0 408 #> 9042 TCGA-CD-5799-01 0 396 0 396 0 396 0 396 #> 9043 TCGA-CD-5800-01 0 400 0 400 0 400 0 400 #> 9044 TCGA-CD-5801-01 1 401 1 401 NA NA 1 401 #> 9045 TCGA-CD-5803-01 1 341 1 341 NA NA 1 300 #> 9046 TCGA-CD-5804-01 0 368 0 368 0 368 0 368 #> 9047 TCGA-CD-5813-01 1 377 1 377 1 315 1 315 #> 9048 TCGA-CD-8524-01 0 388 0 388 1 69 1 69 #> 9049 TCGA-CD-8525-01 0 383 0 383 0 383 0 383 #> 9050 TCGA-CD-8526-01 0 381 0 381 0 381 0 381 #> 9051 TCGA-CD-8527-01 1 218 1 218 1 159 1 159 #> 9052 TCGA-CD-8528-01 0 375 0 375 0 375 0 375 #> 9053 TCGA-CD-8529-01 0 374 0 374 NA NA 0 374 #> 9054 TCGA-CD-8530-01 0 377 0 377 0 377 0 377 #> 9055 TCGA-CD-8531-01 0 383 0 383 0 383 0 383 #> 9056 TCGA-CD-8532-01 1 354 1 354 1 282 1 282 #> 9057 TCGA-CD-8533-01 0 468 0 468 1 226 1 226 #> 9058 TCGA-CD-8534-01 0 367 0 367 NA NA 1 201 #> 9059 TCGA-CD-8535-01 0 390 0 390 0 390 0 390 #> 9060 TCGA-CD-8536-01 0 378 0 378 0 378 0 378 #> 9061 TCGA-CD-A486-01 1 192 1 192 1 79 1 79 #> 9062 TCGA-CD-A489-01 1 344 1 344 1 277 1 277 #> 9063 TCGA-CD-A48A-01 0 378 0 378 0 378 0 378 #> 9064 TCGA-CD-A48C-01 1 353 1 353 1 230 1 230 #> 9065 TCGA-CD-A4MG-01 1 200 1 200 1 74 1 74 #> 9066 TCGA-CD-A4MH-01 0 371 0 371 0 371 0 371 #> 9067 TCGA-CD-A4MI-01 1 358 1 358 1 271 1 271 #> 9068 TCGA-CD-A4MJ-01 0 384 0 384 1 69 1 69 #> 9069 TCGA-CG-4301-01 0 92 0 92 NA NA 0 92 #> 9070 TCGA-CG-4304-01 0 NA 0 NA NA NA 0 NA #> 9071 TCGA-CG-4305-01 0 485 0 485 NA NA 1 457 #> 9072 TCGA-CG-4306-01 1 31 NA 31 NA NA 0 31 #> 9073 TCGA-CG-4436-01 0 243 0 243 0 243 0 243 #> 9074 TCGA-CG-4437-01 0 245 0 245 0 245 0 245 #> 9075 TCGA-CG-4438-01 0 1645 0 1645 NA NA 0 1645 #> 9076 TCGA-CG-4440-01 1 122 NA 122 NA NA 0 122 #> 9077 TCGA-CG-4441-01 1 426 NA 426 NA NA 0 426 #> 9078 TCGA-CG-4442-01 0 0 0 0 NA NA 0 0 #> 9079 TCGA-CG-4443-01 0 912 0 912 NA NA 0 912 #> 9080 TCGA-CG-4444-01 0 1431 0 1431 0 1431 0 1431 #> 9081 TCGA-CG-4449-01 0 580 0 580 NA NA 1 336 #> 9082 TCGA-CG-4460-01 1 669 1 669 NA NA 1 487 #> 9083 TCGA-CG-4462-01 1 0 1 0 NA NA 1 0 #> 9084 TCGA-CG-4465-01 1 274 NA 274 NA NA 0 274 #> 9085 TCGA-CG-4466-01 0 577 0 577 0 577 0 577 #> 9086 TCGA-CG-4469-01 1 215 NA 215 NA NA 0 215 #> 9087 TCGA-CG-4472-01 0 365 0 365 NA NA 1 122 #> 9088 TCGA-CG-4474-01 0 0 0 0 NA NA 0 0 #> 9089 TCGA-CG-4475-01 0 699 0 699 NA NA 0 699 #> 9090 TCGA-CG-4476-01 0 0 0 0 NA NA 0 0 #> 9091 TCGA-CG-4477-01 0 942 0 942 NA NA 1 365 #> 9092 TCGA-CG-5716-01 0 0 0 0 NA NA 0 0 #> 9093 TCGA-CG-5717-01 1 212 1 212 NA NA 1 120 #> 9094 TCGA-CG-5718-01 1 1095 0 1095 NA NA 0 1095 #> 9095 TCGA-CG-5719-01 0 31 0 31 NA NA 0 31 #> 9096 TCGA-CG-5720-01 1 30 0 30 NA NA 0 30 #> 9097 TCGA-CG-5720-11 1 30 0 30 NA NA 0 30 #> 9098 TCGA-CG-5721-01 0 183 0 183 NA NA 0 183 #> 9099 TCGA-CG-5722-01 0 30 0 30 NA NA 0 30 #> 9100 TCGA-CG-5722-11 0 30 0 30 NA NA 0 30 #> 9101 TCGA-CG-5723-01 0 3196 0 3196 NA NA 0 3196 #> 9102 TCGA-CG-5724-01 1 366 1 366 NA NA 1 122 #> 9103 TCGA-CG-5725-01 1 457 1 457 NA NA 1 153 #> 9104 TCGA-CG-5726-01 1 881 0 881 NA NA 0 881 #> 9105 TCGA-CG-5728-11 0 1980 0 1980 NA NA 0 1980 #> 9106 TCGA-CG-5730-11 0 122 0 122 NA NA 0 122 #> 9107 TCGA-CG-5732-01 1 2100 1 2100 NA NA 1 1949 #> 9108 TCGA-CG-5733-11 1 641 1 641 NA NA 1 427 #> 9109 TCGA-CG-5734-01 1 243 NA 243 NA NA 0 243 #> 9110 TCGA-CG-5734-11 1 243 NA 243 NA NA 0 243 #> 9111 TCGA-D7-5577-01 1 782 1 782 NA NA 1 376 #> 9112 TCGA-D7-5578-01 0 385 0 385 NA NA 0 385 #> 9113 TCGA-D7-6518-01 0 582 0 582 0 582 0 582 #> 9114 TCGA-D7-6519-01 0 625 0 625 NA NA 1 429 #> 9115 TCGA-D7-6520-01 0 573 0 573 NA NA 1 46 #> 9116 TCGA-D7-6521-01 0 564 0 564 NA NA 1 192 #> 9117 TCGA-D7-6522-01 0 566 0 566 0 566 0 566 #> 9118 TCGA-D7-6524-01 0 543 0 543 NA NA 1 543 #> 9119 TCGA-D7-6525-01 1 406 1 406 NA NA 1 171 #> 9120 TCGA-D7-6526-01 0 523 0 523 0 523 0 523 #> 9121 TCGA-D7-6527-01 1 312 1 312 NA NA 1 75 #> 9122 TCGA-D7-6528-01 0 463 0 463 0 463 0 463 #> 9123 TCGA-D7-6815-01 0 486 0 486 0 486 0 486 #> 9124 TCGA-D7-6817-01 0 389 0 389 NA NA 0 389 #> 9125 TCGA-D7-6818-01 1 376 1 376 NA NA 1 247 #> 9126 TCGA-D7-6820-01 0 344 0 344 0 344 0 344 #> 9127 TCGA-D7-6822-01 0 375 0 375 0 375 0 375 #> 9128 TCGA-D7-8570-01 0 752 0 752 0 752 0 752 #> 9129 TCGA-D7-8572-01 0 511 0 511 0 511 0 511 #> 9130 TCGA-D7-8573-01 0 593 0 593 0 593 0 593 #> 9131 TCGA-D7-8574-01 0 523 0 523 0 523 0 523 #> 9132 TCGA-D7-8575-01 1 554 1 554 1 427 1 427 #> 9133 TCGA-D7-8576-01 1 446 1 446 1 204 1 204 #> 9134 TCGA-D7-8578-01 0 643 0 643 1 451 1 451 #> 9135 TCGA-D7-8579-01 0 636 0 636 0 636 0 636 #> 9136 TCGA-D7-A4YT-01 0 434 0 434 0 434 0 434 #> 9137 TCGA-D7-A4YU-01 0 500 0 500 NA NA 0 500 #> 9138 TCGA-D7-A4YV-01 1 180 0 180 0 180 0 180 #> 9139 TCGA-D7-A4YX-01 0 1108 0 1108 0 1108 0 1108 #> 9140 TCGA-D7-A4YY-01 0 419 0 419 NA NA 0 419 #> 9141 TCGA-D7-A4Z0-01 0 449 0 449 0 449 0 449 #> 9142 TCGA-D7-A6EV-01 0 342 0 342 0 342 0 342 #> 9143 TCGA-D7-A6EX-01 0 344 0 344 0 344 0 344 #> 9144 TCGA-D7-A6EY-01 1 348 1 348 NA NA 1 348 #> 9145 TCGA-D7-A6EZ-01 1 618 1 618 NA NA 1 618 #> 9146 TCGA-D7-A6F0-01 0 678 0 678 0 678 0 678 #> 9147 TCGA-D7-A6F2-01 0 476 0 476 0 476 0 476 #> 9148 TCGA-D7-A747-01 1 255 1 255 NA NA 1 255 #> 9149 TCGA-D7-A748-01 1 132 1 132 NA NA 1 99 #> 9150 TCGA-D7-A74A-01 0 607 0 607 0 607 0 607 #> 9151 TCGA-EQ-8122-01 1 243 NA 243 NA NA 0 243 #> 9152 TCGA-EQ-A4SO-01 0 494 0 494 0 494 0 494 #> 9153 TCGA-F1-6177-01 0 200 0 200 0 200 0 200 #> 9154 TCGA-F1-6874-01 0 440 0 440 0 440 0 440 #> 9155 TCGA-F1-6875-01 1 2197 0 2197 0 2197 0 2197 #> 9156 TCGA-F1-A448-01 0 647 0 647 0 647 0 647 #> 9157 TCGA-F1-A72C-01 0 346 0 346 1 343 1 343 #> 9158 TCGA-FP-7735-01 1 106 0 106 0 106 0 106 #> 9159 TCGA-FP-7735-11 1 106 0 106 0 106 0 106 #> 9160 TCGA-FP-7829-01 0 594 0 594 0 594 0 594 #> 9161 TCGA-FP-7829-11 0 594 0 594 0 594 0 594 #> 9162 TCGA-FP-7916-01 1 428 1 428 NA NA 1 428 #> 9163 TCGA-FP-7998-01 0 678 0 678 0 678 0 678 #> 9164 TCGA-FP-8099-01 0 519 0 519 0 519 0 519 #> 9165 TCGA-FP-8209-01 1 1811 1 1811 1 1676 1 1676 #> 9166 TCGA-FP-8210-01 1 153 1 153 NA NA 1 153 #> 9167 TCGA-FP-8211-01 0 413 0 413 0 413 0 413 #> 9168 TCGA-FP-8631-01 0 17 0 17 NA NA 0 17 #> 9169 TCGA-FP-A4BE-01 0 337 0 337 0 337 0 337 #> 9170 TCGA-FP-A4BF-01 1 168 1 168 NA NA 1 159 #> 9171 TCGA-FP-A8CX-01 0 7 0 7 NA NA 0 7 #> 9172 TCGA-FP-A9TM-01 0 189 0 189 0 189 0 189 #> 9173 TCGA-HF-7131-01 0 NA 0 NA 0 NA 0 NA #> 9174 TCGA-HF-7132-01 0 2351 0 2351 0 2351 0 2351 #> 9175 TCGA-HF-7133-01 0 1918 0 1918 NA NA 0 1918 #> 9176 TCGA-HF-7134-01 0 1588 0 1588 0 1588 0 1588 #> 9177 TCGA-HF-7136-01 0 NA 0 NA NA NA 0 NA #> 9178 TCGA-HF-A5NB-01 0 928 0 928 0 928 0 928 #> 9179 TCGA-HJ-7597-01 1 805 1 805 1 231 1 231 #> 9180 TCGA-HU-8238-01 0 46 0 46 0 46 0 46 #> 9181 TCGA-HU-8238-11 0 46 0 46 0 46 0 46 #> 9182 TCGA-HU-8243-01 1 180 1 180 NA NA 1 132 #> 9183 TCGA-HU-8244-01 0 742 0 742 0 742 0 742 #> 9184 TCGA-HU-8249-01 0 881 0 881 0 881 0 881 #> 9185 TCGA-HU-8602-01 0 679 0 679 0 679 0 679 #> 9186 TCGA-HU-8604-01 0 694 0 694 0 694 0 694 #> 9187 TCGA-HU-8608-01 0 641 0 641 1 277 1 277 #> 9188 TCGA-HU-8610-01 0 23 0 23 NA NA 0 23 #> 9189 TCGA-HU-A4G2-01 0 739 0 739 0 739 0 739 #> 9190 TCGA-HU-A4G3-01 0 170 0 170 NA NA 0 170 #> 9191 TCGA-HU-A4G3-11 0 170 0 170 NA NA 0 170 #> 9192 TCGA-HU-A4G6-01 0 738 0 738 0 738 0 738 #> 9193 TCGA-HU-A4G8-01 0 690 0 690 0 690 0 690 #> 9194 TCGA-HU-A4G9-01 0 736 0 736 NA NA 0 736 #> 9195 TCGA-HU-A4GC-01 0 99 0 99 NA NA 0 99 #> 9196 TCGA-HU-A4GC-11 0 99 0 99 NA NA 0 99 #> 9197 TCGA-HU-A4GD-01 0 692 0 692 NA NA 1 399 #> 9198 TCGA-HU-A4GF-01 0 785 0 785 0 785 0 785 #> 9199 TCGA-HU-A4GH-01 0 358 0 358 0 358 0 358 #> 9200 TCGA-HU-A4GH-11 0 358 0 358 0 358 0 358 #> 9201 TCGA-HU-A4GJ-01 0 650 0 650 NA NA 1 547 #> 9202 TCGA-HU-A4GN-01 0 912 0 912 1 168 1 168 #> 9203 TCGA-HU-A4GN-11 0 912 0 912 1 168 1 168 #> 9204 TCGA-HU-A4GP-01 0 273 0 273 0 273 0 273 #> 9205 TCGA-HU-A4GP-11 0 273 0 273 0 273 0 273 #> 9206 TCGA-HU-A4GQ-01 1 3 1 3 0 3 0 3 #> 9207 TCGA-HU-A4GT-01 0 198 0 198 0 198 0 198 #> 9208 TCGA-HU-A4GU-01 0 200 0 200 0 200 0 200 #> 9209 TCGA-HU-A4GX-01 0 616 0 616 0 616 0 616 #> 9210 TCGA-HU-A4GY-01 0 8 0 8 NA NA 0 8 #> 9211 TCGA-HU-A4GY-11 0 8 0 8 NA NA 0 8 #> 9212 TCGA-HU-A4H0-01 0 64 0 64 0 64 0 64 #> 9213 TCGA-HU-A4H2-01 0 394 0 394 0 394 0 394 #> 9214 TCGA-HU-A4H3-01 0 882 0 882 NA NA 1 410 #> 9215 TCGA-HU-A4H4-01 0 725 0 725 0 725 0 725 #> 9216 TCGA-HU-A4H5-01 0 724 0 724 0 724 0 724 #> 9217 TCGA-HU-A4H6-01 0 644 0 644 0 644 0 644 #> 9218 TCGA-HU-A4H8-01 0 428 NA 428 1 354 1 354 #> 9219 TCGA-HU-A4HB-01 1 477 1 477 1 390 1 390 #> 9220 TCGA-HU-A4HB-11 1 477 1 477 1 390 1 390 #> 9221 TCGA-HU-A4HD-01 0 1016 0 1016 NA NA 0 1016 #> 9222 TCGA-IN-7806-01 0 1106 0 1106 0 1106 0 1106 #> 9223 TCGA-IN-7806-11 0 1106 0 1106 0 1106 0 1106 #> 9224 TCGA-IN-7808-01 1 105 1 105 NA NA 1 105 #> 9225 TCGA-IN-8462-01 0 572 0 572 NA NA 1 270 #> 9226 TCGA-IN-8462-11 0 572 0 572 NA NA 1 270 #> 9227 TCGA-IN-8663-01 1 103 0 103 NA NA 0 103 #> 9228 TCGA-IN-8663-11 1 103 0 103 NA NA 0 103 #> 9229 TCGA-IN-A6RI-01 0 559 0 559 0 559 0 559 #> 9230 TCGA-IN-A6RJ-01 0 379 0 379 0 379 0 379 #> 9231 TCGA-IN-A6RL-01 1 406 1 406 1 307 1 307 #> 9232 TCGA-IN-A6RO-01 1 NA 1 NA NA NA 1 154 #> 9233 TCGA-IN-A6RR-01 1 205 0 205 NA NA 0 205 #> 9234 TCGA-IN-A6RS-01 0 383 0 383 0 383 0 383 #> 9235 TCGA-IN-A7NR-01 0 198 0 198 NA NA 0 198 #> 9236 TCGA-IN-A7NT-01 0 323 0 323 0 323 0 323 #> 9237 TCGA-IN-A7NU-01 0 356 0 356 NA NA 1 337 #> 9238 TCGA-IN-AB1V-01 0 479 0 479 0 479 0 479 #> 9239 TCGA-IN-AB1V-11 0 479 0 479 0 479 0 479 #> 9240 TCGA-IN-AB1X-01 0 411 0 411 0 411 0 411 #> 9241 TCGA-IN-AB1X-11 0 411 0 411 0 411 0 411 #> 9242 TCGA-IP-7968-01 0 77 0 77 NA NA 0 77 #> 9243 TCGA-IP-7968-11 0 77 0 77 NA NA 0 77 #> 9244 TCGA-KB-A6F7-01 0 1935 0 1935 0 1935 0 1935 #> 9245 TCGA-KB-A93G-01 0 613 0 613 0 613 0 613 #> 9246 TCGA-KB-A93H-01 0 1145 0 1145 0 1145 0 1145 #> 9247 TCGA-KB-A93J-01 0 1124 0 1124 0 1124 0 1124 #> 9248 TCGA-MX-A5UG-01 1 113 1 113 NA NA 0 113 #> 9249 TCGA-MX-A5UJ-01 0 600 0 600 0 600 0 600 #> 9250 TCGA-MX-A663-01 1 300 1 300 1 218 1 218 #> 9251 TCGA-MX-A666-01 0 427 0 427 NA NA 0 427 #> 9252 TCGA-R5-A7O7-01 0 1389 0 1389 NA NA 0 1389 #> 9253 TCGA-R5-A7ZE-01 1 554 1 554 NA NA 1 554 #> 9254 TCGA-R5-A7ZF-01 1 259 1 259 NA NA 1 259 #> 9255 TCGA-R5-A7ZI-01 0 2267 0 2267 NA NA 0 2267 #> 9256 TCGA-R5-A7ZR-01 1 185 1 185 NA NA 1 185 #> 9257 TCGA-R5-A805-01 1 281 1 281 NA NA 1 281 #> 9258 TCGA-RD-A7BS-01 1 336 1 336 1 244 1 244 #> 9259 TCGA-RD-A7BT-01 1 262 1 262 NA NA 1 123 #> 9260 TCGA-RD-A7BW-01 1 156 0 156 0 156 0 156 #> 9261 TCGA-RD-A7C1-01 1 507 1 507 1 438 1 438 #> 9262 TCGA-RD-A8MV-01 0 3720 0 3720 0 3720 0 3720 #> 9263 TCGA-RD-A8MW-01 1 1153 1 1153 1 98 1 98 #> 9264 TCGA-RD-A8N0-01 0 1236 0 1236 0 1236 0 1236 #> 9265 TCGA-RD-A8N1-01 0 3519 0 3519 0 3519 0 3519 #> 9266 TCGA-RD-A8N2-01 0 3540 0 3540 0 3540 0 3540 #> 9267 TCGA-RD-A8N4-01 0 2171 0 2171 0 2171 0 2171 #> 9268 TCGA-RD-A8N5-01 1 1747 0 1747 0 1747 0 1747 #> 9269 TCGA-RD-A8N6-01 1 272 1 272 1 163 1 163 #> 9270 TCGA-RD-A8N9-01 0 1083 0 1083 0 1083 0 1083 #> 9271 TCGA-RD-A8NB-01 1 513 1 513 NA NA 1 230 #> 9272 TCGA-SW-A7EA-01 0 579 0 579 0 579 0 579 #> 9273 TCGA-SW-A7EB-01 0 176 0 176 NA NA 0 176 #> 9274 TCGA-VQ-A8DT-01 0 1484 0 1484 1 1376 1 1376 #> 9275 TCGA-VQ-A8DU-01 1 166 1 166 NA NA 1 158 #> 9276 TCGA-VQ-A8DV-01 1 403 1 403 NA NA 1 288 #> 9277 TCGA-VQ-A8DZ-01 1 396 1 396 NA NA 1 396 #> 9278 TCGA-VQ-A8E0-01 1 562 1 562 NA NA 1 531 #> 9279 TCGA-VQ-A8E2-01 0 1319 0 1319 0 1319 0 1319 #> 9280 TCGA-VQ-A8E3-01 1 661 NA 661 NA NA 1 538 #> 9281 TCGA-VQ-A8E7-01 0 1138 0 1138 NA NA 1 1048 #> 9282 TCGA-VQ-A8P2-01 0 1160 0 1160 0 1160 0 1160 #> 9283 TCGA-VQ-A8P3-01 0 1132 0 1132 0 1132 0 1132 #> 9284 TCGA-VQ-A8P5-01 1 235 NA 235 NA NA 0 235 #> 9285 TCGA-VQ-A8P8-01 0 942 0 942 0 942 0 942 #> 9286 TCGA-VQ-A8PB-01 1 1043 0 1043 0 1043 0 1043 #> 9287 TCGA-VQ-A8PC-01 1 1407 1 1407 NA NA 1 1287 #> 9288 TCGA-VQ-A8PD-01 1 496 1 496 NA NA 1 134 #> 9289 TCGA-VQ-A8PE-01 1 675 1 675 NA NA 1 265 #> 9290 TCGA-VQ-A8PF-01 1 76 0 76 0 76 0 76 #> 9291 TCGA-VQ-A8PH-01 1 389 1 389 NA NA 1 377 #> 9292 TCGA-VQ-A8PJ-01 1 82 1 82 NA NA 1 82 #> 9293 TCGA-VQ-A8PK-01 1 543 1 543 NA NA 1 263 #> 9294 TCGA-VQ-A8PM-01 1 57 0 57 NA NA 1 57 #> 9295 TCGA-VQ-A8PO-01 1 282 1 282 NA NA 1 256 #> 9296 TCGA-VQ-A8PP-01 1 712 1 712 NA NA 1 502 #> 9297 TCGA-VQ-A8PQ-01 1 476 1 476 NA NA 1 91 #> 9298 TCGA-VQ-A8PU-01 1 832 0 832 0 832 0 832 #> 9299 TCGA-VQ-A8PX-01 0 1964 0 1964 0 1964 0 1964 #> 9300 TCGA-VQ-A91A-01 0 1200 0 1200 0 1200 1 129 #> 9301 TCGA-VQ-A91D-01 1 356 1 356 NA NA 1 351 #> 9302 TCGA-VQ-A91E-01 0 664 0 664 0 664 0 664 #> 9303 TCGA-VQ-A91K-01 0 1862 0 1862 0 1862 0 1862 #> 9304 TCGA-VQ-A91N-01 1 570 1 570 NA NA 1 438 #> 9305 TCGA-VQ-A91Q-01 1 633 1 633 NA NA 1 551 #> 9306 TCGA-VQ-A91S-01 0 1000 0 1000 0 1000 0 1000 #> 9307 TCGA-VQ-A91U-01 1 52 NA 52 NA NA 0 52 #> 9308 TCGA-VQ-A91V-01 0 1297 0 1297 NA NA 1 504 #> 9309 TCGA-VQ-A91W-01 0 1851 0 1851 0 1851 0 1851 #> 9310 TCGA-VQ-A91X-01 1 289 0 289 0 289 0 289 #> 9311 TCGA-VQ-A91Y-01 1 296 1 296 NA NA 1 258 #> 9312 TCGA-VQ-A91Z-01 0 1690 0 1690 1 1310 1 1310 #> 9313 TCGA-VQ-A922-01 1 275 1 275 NA NA 1 252 #> 9314 TCGA-VQ-A923-01 1 61 0 61 0 61 0 61 #> 9315 TCGA-VQ-A924-01 1 1686 1 1686 NA NA 1 1686 #> 9316 TCGA-VQ-A925-01 1 138 1 138 NA NA 1 138 #> 9317 TCGA-VQ-A927-01 1 200 1 200 NA NA 1 200 #> 9318 TCGA-VQ-A928-01 1 174 1 174 NA NA 1 148 #> 9319 TCGA-VQ-A92D-01 0 2032 0 2032 0 2032 0 2032 #> 9320 TCGA-VQ-A94O-01 1 640 1 640 NA NA 1 185 #> 9321 TCGA-VQ-A94P-01 1 81 1 81 NA NA 1 81 #> 9322 TCGA-VQ-A94R-01 1 1294 1 1294 NA NA 1 1018 #> 9323 TCGA-VQ-A94T-01 1 342 1 342 NA NA 1 296 #> 9324 TCGA-VQ-A94U-01 0 819 0 819 0 819 0 819 #> 9325 TCGA-VQ-AA64-01 1 560 1 560 NA NA 1 560 #> 9326 TCGA-VQ-AA68-01 0 1328 0 1328 0 1328 0 1328 #> 9327 TCGA-VQ-AA69-01 0 864 0 864 0 864 0 864 #> 9328 TCGA-VQ-AA6A-01 0 1184 0 1184 0 1184 0 1184 #> 9329 TCGA-VQ-AA6B-01 0 1002 0 1002 0 1002 0 1002 #> 9330 TCGA-VQ-AA6D-01 0 521 0 521 0 521 0 521 #> 9331 TCGA-VQ-AA6F-01 0 1646 0 1646 NA NA 1 546 #> 9332 TCGA-VQ-AA6G-01 1 792 1 792 NA NA 1 469 #> 9333 TCGA-VQ-AA6I-01 1 491 1 491 NA NA 1 475 #> 9334 TCGA-VQ-AA6J-01 0 838 0 838 0 838 0 838 #> 9335 TCGA-VQ-AA6K-01 1 378 1 378 NA NA 1 332 #> 9336 TCGA-ZA-A8F6-01 0 525 0 525 0 525 0 525 #> 9337 TCGA-ZQ-A9CR-01 1 24 NA 24 NA NA 0 24 #> 9338 TCGA-2G-AAEW-01 1 618 1 618 NA NA 1 143 #> 9339 TCGA-2G-AAEX-01 0 1259 0 1259 0 1259 0 1259 #> 9340 TCGA-2G-AAF1-01 0 1403 0 1403 0 1403 0 1403 #> 9341 TCGA-2G-AAF4-01 0 2315 0 2315 0 2315 0 2315 #> 9342 TCGA-2G-AAF6-01 0 3491 0 3491 1 810 1 810 #> 9343 TCGA-2G-AAF8-01 0 3911 0 3911 1 3149 1 3149 #> 9344 TCGA-2G-AAFE-01 0 4702 0 4702 1 617 1 617 #> 9345 TCGA-2G-AAFG-05 0 6183 0 6183 1 2495 1 2495 #> 9346 TCGA-2G-AAFG-01 0 6183 0 6183 1 2495 1 2495 #> 9347 TCGA-2G-AAFH-01 0 1375 0 1375 0 1375 0 1375 #> 9348 TCGA-2G-AAFI-01 0 675 0 675 0 675 0 675 #> 9349 TCGA-2G-AAFJ-01 0 792 0 792 1 313 1 313 #> 9350 TCGA-2G-AAFL-01 0 750 0 750 1 38 1 38 #> 9351 TCGA-2G-AAFM-01 0 503 0 503 0 503 0 503 #> 9352 TCGA-2G-AAFN-01 0 773 0 773 0 773 0 773 #> 9353 TCGA-2G-AAFO-01 0 685 0 685 0 685 0 685 #> 9354 TCGA-2G-AAFV-01 0 1389 0 1389 0 1389 0 1389 #> 9355 TCGA-2G-AAFY-01 0 1099 0 1099 0 1099 0 1099 #> 9356 TCGA-2G-AAFZ-01 0 1353 0 1353 NA NA 0 1353 #> 9357 TCGA-2G-AAG0-01 0 1529 0 1529 1 90 1 90 #> 9358 TCGA-2G-AAG3-01 0 1593 0 1593 0 1593 1 181 #> 9359 TCGA-2G-AAG5-01 0 2299 0 2299 1 451 1 451 #> 9360 TCGA-2G-AAG6-01 0 2231 0 2231 0 2231 0 2231 #> 9361 TCGA-2G-AAG7-01 0 2475 0 2475 0 2475 0 2475 #> 9362 TCGA-2G-AAG8-01 0 2289 0 2289 0 2289 0 2289 #> 9363 TCGA-2G-AAG9-01 0 2234 0 2234 NA NA 0 2234 #> 9364 TCGA-2G-AAGA-01 0 2439 0 2439 0 2439 0 2439 #> 9365 TCGA-2G-AAGC-01 0 2585 0 2585 1 317 1 317 #> 9366 TCGA-2G-AAGE-01 0 2478 0 2478 1 121 1 121 #> 9367 TCGA-2G-AAGF-01 0 2734 0 2734 1 139 1 139 #> 9368 TCGA-2G-AAGG-01 0 2611 0 2611 NA NA 0 2611 #> 9369 TCGA-2G-AAGI-05 0 3137 0 3137 1 2193 1 2193 #> 9370 TCGA-2G-AAGI-01 0 3137 0 3137 1 2193 1 2193 #> 9371 TCGA-2G-AAGJ-01 0 2938 0 2938 1 171 1 171 #> 9372 TCGA-2G-AAGK-01 0 3621 0 3621 1 713 1 713 #> 9373 TCGA-2G-AAGM-01 0 3891 0 3891 NA NA 0 3891 #> 9374 TCGA-2G-AAGN-01 0 3656 0 3656 NA NA 0 3656 #> 9375 TCGA-2G-AAGO-01 0 4026 0 4026 NA NA 0 4026 #> 9376 TCGA-2G-AAGP-01 0 4018 0 4018 0 4018 0 4018 #> 9377 TCGA-2G-AAGS-01 0 4816 0 4816 0 4816 0 4816 #> 9378 TCGA-2G-AAGT-01 0 4406 0 4406 1 15 1 15 #> 9379 TCGA-2G-AAGV-01 0 4527 0 4527 0 4527 0 4527 #> 9380 TCGA-2G-AAGW-01 0 4899 0 4899 0 4899 0 4899 #> 9381 TCGA-2G-AAGX-01 0 5514 0 5514 1 4323 1 4323 #> 9382 TCGA-2G-AAGY-05 0 5329 0 5329 1 623 1 623 #> 9383 TCGA-2G-AAGY-01 0 5329 0 5329 1 623 1 623 #> 9384 TCGA-2G-AAGZ-01 0 5233 0 5233 NA NA 0 5233 #> 9385 TCGA-2G-AAH0-01 0 5477 0 5477 1 107 1 107 #> 9386 TCGA-2G-AAH2-01 0 6060 0 6060 0 6060 0 6060 #> 9387 TCGA-2G-AAH3-01 0 1822 0 1822 0 1822 0 1822 #> 9388 TCGA-2G-AAH4-01 0 6210 0 6210 NA NA 0 6210 #> 9389 TCGA-2G-AAH8-01 0 2248 0 2248 NA NA 0 2248 #> 9390 TCGA-2G-AAHA-01 0 3349 0 3349 NA NA 0 3349 #> 9391 TCGA-2G-AAHC-01 0 5539 0 5539 0 5539 0 5539 #> 9392 TCGA-2G-AAHG-01 0 1819 0 1819 0 1819 0 1819 #> 9393 TCGA-2G-AAHL-01 0 7081 0 7081 0 7081 0 7081 #> 9394 TCGA-2G-AAHN-01 0 6445 0 6445 0 6445 0 6445 #> 9395 TCGA-2G-AAHP-05 0 5667 0 5667 1 816 1 816 #> 9396 TCGA-2G-AAHP-01 0 5667 0 5667 1 816 1 816 #> 9397 TCGA-2G-AAHT-01 0 542 0 542 0 542 0 542 #> 9398 TCGA-2G-AAKD-01 0 6340 0 6340 NA NA 0 6340 #> 9399 TCGA-2G-AAKG-05 0 6598 0 6598 1 122 1 122 #> 9400 TCGA-2G-AAKG-01 0 6598 0 6598 1 122 1 122 #> 9401 TCGA-2G-AAKH-01 0 6862 0 6862 0 6862 0 6862 #> 9402 TCGA-2G-AAKL-01 0 7023 0 7023 NA NA 0 7023 #> 9403 TCGA-2G-AAKM-01 1 6972 0 6972 0 6972 0 6972 #> 9404 TCGA-2G-AAL5-01 0 7437 0 7437 1 3723 1 3723 #> 9405 TCGA-2G-AAL7-01 0 3991 0 3991 1 2 1 2 #> 9406 TCGA-2G-AALP-01 0 2645 0 2645 NA NA 0 2645 #> 9407 TCGA-2X-A9D5-01 0 435 0 435 0 435 0 435 #> 9408 TCGA-2X-A9D6-01 0 607 0 607 0 607 0 607 #> 9409 TCGA-4K-AA1G-01 0 436 0 436 0 436 0 436 #> 9410 TCGA-4K-AA1H-01 0 518 0 518 0 518 0 518 #> 9411 TCGA-4K-AA1I-01 0 3 0 3 NA NA 0 3 #> 9412 TCGA-4K-AAAL-01 0 483 0 483 1 147 1 147 #> 9413 TCGA-S6-A8JW-01 0 698 0 698 0 698 0 698 #> 9414 TCGA-S6-A8JX-01 0 552 0 552 0 552 0 552 #> 9415 TCGA-S6-A8JY-01 0 278 0 278 NA NA 0 278 #> 9416 TCGA-SB-A6J6-01 0 413 0 413 0 413 0 413 #> 9417 TCGA-SB-A76C-01 0 42 0 42 0 42 0 42 #> 9418 TCGA-SN-A6IS-01 0 496 0 496 0 496 0 496 #> 9419 TCGA-SN-A84W-01 0 293 0 293 0 293 0 293 #> 9420 TCGA-SN-A84X-01 0 312 0 312 0 312 0 312 #> 9421 TCGA-SN-A84Y-01 0 524 0 524 NA NA 1 44 #> 9422 TCGA-SO-A8JP-01 0 540 0 540 0 540 0 540 #> 9423 TCGA-VF-A8A8-01 0 1131 0 1131 0 1131 0 1131 #> 9424 TCGA-VF-A8A9-01 0 1119 0 1119 0 1119 0 1119 #> 9425 TCGA-VF-A8AB-01 0 760 0 760 NA NA 0 760 #> 9426 TCGA-VF-A8AC-01 0 1083 0 1083 0 1083 0 1083 #> 9427 TCGA-VF-A8AD-01 0 1006 0 1006 1 276 1 276 #> 9428 TCGA-VF-A8AE-01 0 727 0 727 0 727 0 727 #> 9429 TCGA-W4-A7U2-01 0 1263 0 1263 0 1263 0 1263 #> 9430 TCGA-W4-A7U3-01 0 149 0 149 0 149 0 149 #> 9431 TCGA-W4-A7U4-01 0 738 0 738 0 738 0 738 #> 9432 TCGA-WZ-A7V3-01 0 753 0 753 0 753 0 753 #> 9433 TCGA-WZ-A7V4-01 0 894 0 894 0 894 0 894 #> 9434 TCGA-WZ-A7V5-01 0 1061 0 1061 0 1061 0 1061 #> 9435 TCGA-WZ-A8D5-01 0 774 0 774 0 774 0 774 #> 9436 TCGA-X3-A8G4-01 0 856 0 856 NA NA 0 856 #> 9437 TCGA-XE-A8H1-01 0 209 0 209 0 209 0 209 #> 9438 TCGA-XE-A8H4-01 0 559 0 559 0 559 0 559 #> 9439 TCGA-XE-A8H5-01 0 1217 0 1217 0 1217 0 1217 #> 9440 TCGA-XE-A9SE-01 0 708 0 708 0 708 0 708 #> 9441 TCGA-XE-AANI-01 0 1041 0 1041 0 1041 0 1041 #> 9442 TCGA-XE-AANJ-01 0 2007 0 2007 NA NA 1 328 #> 9443 TCGA-XE-AANR-01 0 14 0 14 NA NA 0 14 #> 9444 TCGA-XE-AANV-01 0 1701 0 1701 1 1370 1 1370 #> 9445 TCGA-XE-AAO3-01 0 2857 0 2857 NA NA 0 2857 #> 9446 TCGA-XE-AAO4-01 0 367 0 367 0 367 0 367 #> 9447 TCGA-XE-AAO6-01 0 240 0 240 0 240 0 240 #> 9448 TCGA-XE-AAOB-01 1 513 1 513 NA NA 1 231 #> 9449 TCGA-XE-AAOC-01 0 270 0 270 0 270 0 270 #> 9450 TCGA-XE-AAOD-01 0 2058 0 2058 0 2058 0 2058 #> 9451 TCGA-XE-AAOF-01 0 1268 0 1268 0 1268 0 1268 #> 9452 TCGA-XE-AAOJ-01 0 1550 0 1550 NA NA 1 266 #> 9453 TCGA-XE-AAOL-01 0 13 0 13 NA NA 0 13 #> 9454 TCGA-XY-A89B-01 0 471 0 471 0 471 0 471 #> 9455 TCGA-XY-A8S2-01 0 672 0 672 0 672 0 672 #> 9456 TCGA-XY-A8S3-01 0 843 0 843 0 843 0 843 #> 9457 TCGA-XY-A9T9-01 0 281 0 281 0 281 0 281 #> 9458 TCGA-YU-A90P-01 0 2069 0 2069 0 2069 0 2069 #> 9459 TCGA-YU-A90Q-01 0 1964 0 1964 0 1964 0 1964 #> 9460 TCGA-YU-A90S-01 0 971 0 971 NA NA 0 971 #> 9461 TCGA-YU-A90W-01 0 1113 0 1113 0 1113 0 1113 #> 9462 TCGA-YU-A90Y-01 1 17 1 17 NA NA 1 17 #> 9463 TCGA-YU-A912-01 0 866 0 866 NA NA 0 866 #> 9464 TCGA-YU-A94D-01 0 2167 0 2167 0 2167 0 2167 #> 9465 TCGA-YU-A94I-01 0 536 0 536 0 536 0 536 #> 9466 TCGA-YU-AA4L-01 0 1573 0 1573 NA NA 1 105 #> 9467 TCGA-YU-AA61-01 0 864 0 864 0 864 0 864 #> 9468 TCGA-ZM-AA05-01 0 1126 0 1126 0 1126 0 1126 #> 9469 TCGA-ZM-AA06-01 0 1498 0 1498 0 1498 0 1498 #> 9470 TCGA-ZM-AA0B-01 0 838 0 838 0 838 0 838 #> 9471 TCGA-ZM-AA0D-01 0 848 0 848 0 848 0 848 #> 9472 TCGA-ZM-AA0E-01 0 811 0 811 0 811 0 811 #> 9473 TCGA-ZM-AA0F-01 0 681 0 681 0 681 0 681 #> 9474 TCGA-ZM-AA0H-01 0 1736 0 1736 0 1736 0 1736 #> 9475 TCGA-4C-A93U-01 0 129 0 129 NA NA 0 129 #> 9476 TCGA-BJ-A0YZ-01 0 754 0 754 0 754 0 754 #> 9477 TCGA-BJ-A0Z0-01 0 419 0 419 0 419 0 419 #> 9478 TCGA-BJ-A0Z2-01 0 1514 0 1514 NA NA 1 158 #> 9479 TCGA-BJ-A0Z3-01 0 497 0 497 NA NA 0 497 #> 9480 TCGA-BJ-A0Z5-01 0 448 0 448 NA NA 0 448 #> 9481 TCGA-BJ-A0Z9-01 0 1257 0 1257 NA NA 0 1257 #> 9482 TCGA-BJ-A0ZA-01 0 574 0 574 0 574 0 574 #> 9483 TCGA-BJ-A0ZB-01 0 122 0 122 NA NA 0 122 #> 9484 TCGA-BJ-A0ZC-01 0 352 0 352 0 352 0 352 #> 9485 TCGA-BJ-A0ZE-01 0 509 0 509 NA NA 0 509 #> 9486 TCGA-BJ-A0ZF-01 0 1217 0 1217 1 735 1 735 #> 9487 TCGA-BJ-A0ZG-01 0 775 0 775 NA NA 0 775 #> 9488 TCGA-BJ-A0ZH-01 0 460 0 460 NA NA 0 460 #> 9489 TCGA-BJ-A0ZJ-01 0 1280 0 1280 0 1280 0 1280 #> 9490 TCGA-BJ-A18Y-01 0 1563 0 1563 0 1563 0 1563 #> 9491 TCGA-BJ-A18Z-01 0 1263 0 1263 NA NA 0 1263 #> 9492 TCGA-BJ-A190-01 0 626 0 626 0 626 0 626 #> 9493 TCGA-BJ-A191-01 0 147 0 147 0 147 0 147 #> 9494 TCGA-BJ-A192-01 0 1349 0 1349 NA NA 0 1349 #> 9495 TCGA-BJ-A28R-01 0 1282 0 1282 NA NA 0 1282 #> 9496 TCGA-BJ-A28R-11 0 1282 0 1282 NA NA 0 1282 #> 9497 TCGA-BJ-A28S-01 0 640 0 640 NA NA 0 640 #> 9498 TCGA-BJ-A28T-01 0 1081 0 1081 NA NA 0 1081 #> 9499 TCGA-BJ-A28V-01 0 987 0 987 NA NA 0 987 #> 9500 TCGA-BJ-A28W-01 0 344 0 344 NA NA 0 344 #> 9501 TCGA-BJ-A28W-11 0 344 0 344 NA NA 0 344 #> 9502 TCGA-BJ-A28X-01 0 942 0 942 1 494 1 494 #> 9503 TCGA-BJ-A28X-11 0 942 0 942 1 494 1 494 #> 9504 TCGA-BJ-A28Z-01 0 337 0 337 NA NA 0 337 #> 9505 TCGA-BJ-A290-01 0 919 0 919 NA NA 1 329 #> 9506 TCGA-BJ-A290-11 0 919 0 919 NA NA 1 329 #> 9507 TCGA-BJ-A291-01 0 696 0 696 NA NA 0 696 #> 9508 TCGA-BJ-A2N7-01 0 559 0 559 0 559 0 559 #> 9509 TCGA-BJ-A2N7-11 0 559 0 559 0 559 0 559 #> 9510 TCGA-BJ-A2N8-01 0 504 0 504 NA NA 0 504 #> 9511 TCGA-BJ-A2N8-11 0 504 0 504 NA NA 0 504 #> 9512 TCGA-BJ-A2N9-01 0 623 0 623 NA NA 1 225 #> 9513 TCGA-BJ-A2N9-11 0 623 0 623 NA NA 1 225 #> 9514 TCGA-BJ-A2NA-01 0 577 0 577 NA NA 1 127 #> 9515 TCGA-BJ-A2NA-11 0 577 0 577 NA NA 1 127 #> 9516 TCGA-BJ-A2P4-01 0 390 0 390 0 390 0 390 #> 9517 TCGA-BJ-A3EZ-01 0 487 0 487 NA NA 0 487 #> 9518 TCGA-BJ-A3F0-01 0 424 0 424 0 424 0 424 #> 9519 TCGA-BJ-A3PR-01 0 1107 0 1107 0 1107 0 1107 #> 9520 TCGA-BJ-A3PR-11 0 1107 0 1107 0 1107 0 1107 #> 9521 TCGA-BJ-A3PT-01 0 709 0 709 NA NA 0 709 #> 9522 TCGA-BJ-A3PU-01 0 567 0 567 1 174 1 174 #> 9523 TCGA-BJ-A3PU-11 0 567 0 567 1 174 1 174 #> 9524 TCGA-BJ-A45C-01 1 243 1 243 NA NA 1 243 #> 9525 TCGA-BJ-A45D-01 0 331 0 331 NA NA 0 331 #> 9526 TCGA-BJ-A45E-01 0 639 0 639 NA NA 0 639 #> 9527 TCGA-BJ-A45F-01 0 105 0 105 NA NA 0 105 #> 9528 TCGA-BJ-A45G-01 0 725 0 725 NA NA 0 725 #> 9529 TCGA-BJ-A45H-01 0 865 0 865 NA NA 0 865 #> 9530 TCGA-BJ-A45I-01 0 470 0 470 NA NA 1 110 #> 9531 TCGA-BJ-A45J-01 0 658 0 658 NA NA 0 658 #> 9532 TCGA-BJ-A45K-01 0 705 0 705 NA NA 0 705 #> 9533 TCGA-BJ-A4O8-01 0 591 0 591 0 591 0 591 #> 9534 TCGA-BJ-A4O9-01 0 714 0 714 NA NA 0 714 #> 9535 TCGA-CE-A13K-01 0 385 0 385 0 385 0 385 #> 9536 TCGA-CE-A27D-01 0 374 0 374 0 374 0 374 #> 9537 TCGA-CE-A3MD-01 0 389 0 389 0 389 0 389 #> 9538 TCGA-CE-A3ME-01 0 379 0 379 0 379 0 379 #> 9539 TCGA-CE-A481-01 0 346 0 346 0 346 0 346 #> 9540 TCGA-CE-A482-01 0 325 0 325 0 325 0 325 #> 9541 TCGA-CE-A483-01 0 457 0 457 0 457 0 457 #> 9542 TCGA-CE-A484-01 0 378 0 378 0 378 0 378 #> 9543 TCGA-CE-A485-01 0 385 0 385 0 385 0 385 #> 9544 TCGA-DE-A0XZ-01 0 1090 0 1090 1 204 1 204 #> 9545 TCGA-DE-A0Y2-01 0 658 0 658 0 658 0 658 #> 9546 TCGA-DE-A0Y3-01 0 1526 0 1526 NA NA 1 30 #> 9547 TCGA-DE-A2OL-01 0 1145 0 1145 0 1145 0 1145 #> 9548 TCGA-DE-A3KN-01 0 831 0 831 NA NA 0 831 #> 9549 TCGA-DE-A4M8-01 0 564 0 564 0 564 0 564 #> 9550 TCGA-DE-A4M9-01 0 573 0 573 NA NA 0 573 #> 9551 TCGA-DE-A4MA-01 0 916 0 916 0 916 0 916 #> 9552 TCGA-DE-A4MB-01 0 352 0 352 NA NA 0 352 #> 9553 TCGA-DE-A4MC-01 0 913 0 913 1 332 1 332 #> 9554 TCGA-DE-A4MD-06 0 764 0 764 NA NA 1 267 #> 9555 TCGA-DE-A4MD-01 0 764 0 764 NA NA 1 267 #> 9556 TCGA-DE-A69J-01 0 447 0 447 0 447 0 447 #> 9557 TCGA-DE-A69K-01 0 434 0 434 NA NA 1 434 #> 9558 TCGA-DE-A7U5-01 0 84 0 84 NA NA 0 84 #> 9559 TCGA-DJ-A13L-01 0 303 0 303 0 303 0 303 #> 9560 TCGA-DJ-A13M-01 0 1484 0 1484 0 1484 0 1484 #> 9561 TCGA-DJ-A13O-01 0 1161 0 1161 0 1161 0 1161 #> 9562 TCGA-DJ-A13P-01 0 5150 0 5150 0 5150 0 5150 #> 9563 TCGA-DJ-A13R-01 0 565 0 565 0 565 0 565 #> 9564 TCGA-DJ-A13S-01 0 265 0 265 0 265 0 265 #> 9565 TCGA-DJ-A13T-01 0 1709 0 1709 0 1709 0 1709 #> 9566 TCGA-DJ-A13U-01 0 1590 0 1590 0 1590 0 1590 #> 9567 TCGA-DJ-A13V-01 0 1313 0 1313 0 1313 0 1313 #> 9568 TCGA-DJ-A13X-01 0 253 0 253 0 253 0 253 #> 9569 TCGA-DJ-A1QD-01 0 1462 0 1462 0 1462 0 1462 #> 9570 TCGA-DJ-A1QE-01 0 4134 0 4134 0 4134 0 4134 #> 9571 TCGA-DJ-A1QF-01 0 931 0 931 0 931 0 931 #> 9572 TCGA-DJ-A1QG-01 0 1368 0 1368 0 1368 0 1368 #> 9573 TCGA-DJ-A1QH-01 0 1293 0 1293 NA NA 0 1293 #> 9574 TCGA-DJ-A1QI-01 0 455 0 455 0 455 0 455 #> 9575 TCGA-DJ-A1QL-01 0 535 0 535 0 535 0 535 #> 9576 TCGA-DJ-A1QM-01 0 183 0 183 0 183 0 183 #> 9577 TCGA-DJ-A1QN-01 0 1295 0 1295 0 1295 0 1295 #> 9578 TCGA-DJ-A1QO-01 0 1442 0 1442 0 1442 1 1062 #> 9579 TCGA-DJ-A1QQ-01 0 534 0 534 0 534 0 534 #> 9580 TCGA-DJ-A2PN-01 0 307 0 307 0 307 0 307 #> 9581 TCGA-DJ-A2PO-01 0 243 0 243 0 243 0 243 #> 9582 TCGA-DJ-A2PP-01 0 930 0 930 0 930 0 930 #> 9583 TCGA-DJ-A2PQ-01 0 1077 0 1077 0 1077 0 1077 #> 9584 TCGA-DJ-A2PR-01 0 835 0 835 0 835 0 835 #> 9585 TCGA-DJ-A2PS-01 0 797 0 797 0 797 0 797 #> 9586 TCGA-DJ-A2PT-01 0 1181 0 1181 0 1181 0 1181 #> 9587 TCGA-DJ-A2PU-01 0 1033 0 1033 0 1033 0 1033 #> 9588 TCGA-DJ-A2PV-01 0 973 0 973 0 973 0 973 #> 9589 TCGA-DJ-A2PW-01 0 1060 0 1060 0 1060 0 1060 #> 9590 TCGA-DJ-A2PX-01 0 881 0 881 0 881 0 881 #> 9591 TCGA-DJ-A2PY-01 0 267 0 267 0 267 0 267 #> 9592 TCGA-DJ-A2PZ-01 0 256 0 256 0 256 0 256 #> 9593 TCGA-DJ-A2Q0-01 0 1045 0 1045 0 1045 0 1045 #> 9594 TCGA-DJ-A2Q1-01 0 1148 0 1148 0 1148 0 1148 #> 9595 TCGA-DJ-A2Q2-01 0 1337 0 1337 0 1337 0 1337 #> 9596 TCGA-DJ-A2Q3-01 0 1224 0 1224 0 1224 1 385 #> 9597 TCGA-DJ-A2Q4-01 0 1032 0 1032 0 1032 0 1032 #> 9598 TCGA-DJ-A2Q5-01 0 1140 0 1140 NA NA 0 1140 #> 9599 TCGA-DJ-A2Q6-01 0 1109 0 1109 0 1109 0 1109 #> 9600 TCGA-DJ-A2Q7-01 0 1068 0 1068 0 1068 0 1068 #> 9601 TCGA-DJ-A2Q9-01 0 1092 0 1092 0 1092 0 1092 #> 9602 TCGA-DJ-A2QA-01 0 1020 0 1020 0 1020 0 1020 #> 9603 TCGA-DJ-A2QB-01 0 1070 0 1070 NA NA 0 1070 #> 9604 TCGA-DJ-A2QC-01 0 1215 0 1215 0 1215 0 1215 #> 9605 TCGA-DJ-A3UK-01 0 1123 0 1123 0 1123 0 1123 #> 9606 TCGA-DJ-A3UM-01 0 944 0 944 0 944 0 944 #> 9607 TCGA-DJ-A3UN-01 0 986 0 986 0 986 0 986 #> 9608 TCGA-DJ-A3UO-01 0 957 0 957 NA NA 1 641 #> 9609 TCGA-DJ-A3UP-01 0 499 0 499 0 499 0 499 #> 9610 TCGA-DJ-A3UQ-01 0 595 0 595 0 595 0 595 #> 9611 TCGA-DJ-A3UR-01 0 1105 0 1105 0 1105 0 1105 #> 9612 TCGA-DJ-A3US-01 0 998 0 998 0 998 0 998 #> 9613 TCGA-DJ-A3UT-01 0 1105 0 1105 0 1105 0 1105 #> 9614 TCGA-DJ-A3UU-01 0 713 0 713 NA NA 0 713 #> 9615 TCGA-DJ-A3UV-01 0 1466 0 1466 0 1466 0 1466 #> 9616 TCGA-DJ-A3UW-01 0 1812 0 1812 0 1812 0 1812 #> 9617 TCGA-DJ-A3UX-01 0 345 0 345 0 345 0 345 #> 9618 TCGA-DJ-A3UY-01 0 1091 0 1091 0 1091 0 1091 #> 9619 TCGA-DJ-A3UZ-01 0 1246 0 1246 0 1246 0 1246 #> 9620 TCGA-DJ-A3V0-01 0 1125 0 1125 NA NA 0 1125 #> 9621 TCGA-DJ-A3V2-01 0 615 0 615 0 615 0 615 #> 9622 TCGA-DJ-A3V3-01 0 931 0 931 0 931 0 931 #> 9623 TCGA-DJ-A3V4-01 0 1294 0 1294 0 1294 0 1294 #> 9624 TCGA-DJ-A3V5-01 0 584 0 584 NA NA 0 584 #> 9625 TCGA-DJ-A3V6-01 0 818 0 818 0 818 0 818 #> 9626 TCGA-DJ-A3V7-01 0 706 0 706 0 706 0 706 #> 9627 TCGA-DJ-A3V8-01 0 647 0 647 0 647 0 647 #> 9628 TCGA-DJ-A3V9-01 0 623 0 623 NA NA 0 623 #> 9629 TCGA-DJ-A3VA-01 0 755 0 755 0 755 0 755 #> 9630 TCGA-DJ-A3VB-01 0 697 0 697 0 697 0 697 #> 9631 TCGA-DJ-A3VD-01 0 1238 0 1238 0 1238 0 1238 #> 9632 TCGA-DJ-A3VE-01 0 577 0 577 0 577 0 577 #> 9633 TCGA-DJ-A3VF-01 0 292 0 292 NA NA 0 292 #> 9634 TCGA-DJ-A3VG-01 0 1085 0 1085 0 1085 0 1085 #> 9635 TCGA-DJ-A3VI-01 0 95 0 95 0 95 0 95 #> 9636 TCGA-DJ-A3VJ-01 0 1108 0 1108 0 1108 0 1108 #> 9637 TCGA-DJ-A3VK-01 0 753 0 753 0 753 0 753 #> 9638 TCGA-DJ-A3VL-01 0 713 0 713 0 713 1 411 #> 9639 TCGA-DJ-A3VM-01 0 840 0 840 0 840 0 840 #> 9640 TCGA-DJ-A4UL-01 0 939 0 939 0 939 0 939 #> 9641 TCGA-DJ-A4UP-01 0 916 0 916 0 916 0 916 #> 9642 TCGA-DJ-A4UQ-01 0 1005 0 1005 NA NA 0 1005 #> 9643 TCGA-DJ-A4UR-01 0 1058 0 1058 1 113 1 113 #> 9644 TCGA-DJ-A4UT-01 0 823 0 823 0 823 0 823 #> 9645 TCGA-DJ-A4UW-01 0 819 0 819 NA NA 0 819 #> 9646 TCGA-DJ-A4V0-01 0 1081 0 1081 0 1081 0 1081 #> 9647 TCGA-DJ-A4V2-01 0 95 0 95 0 95 0 95 #> 9648 TCGA-DJ-A4V4-01 0 481 0 481 0 481 0 481 #> 9649 TCGA-DJ-A4V5-01 0 1076 0 1076 NA NA 0 1076 #> 9650 TCGA-DO-A1JZ-01 0 1670 0 1670 NA NA 0 1670 #> 9651 TCGA-DO-A1JZ-11 0 1670 0 1670 NA NA 0 1670 #> 9652 TCGA-DO-A1K0-01 0 655 0 655 1 577 1 577 #> 9653 TCGA-DO-A2HM-01 0 71 0 71 NA NA 0 71 #> 9654 TCGA-E3-A3DY-01 0 2815 0 2815 0 2815 0 2815 #> 9655 TCGA-E3-A3DZ-01 0 1436 0 1436 0 1436 0 1436 #> 9656 TCGA-E3-A3E0-01 0 2019 0 2019 0 2019 0 2019 #> 9657 TCGA-E3-A3E1-01 0 2449 0 2449 0 2449 0 2449 #> 9658 TCGA-E3-A3E2-01 0 1922 0 1922 0 1922 0 1922 #> 9659 TCGA-E3-A3E3-01 0 1595 0 1595 1 445 1 445 #> 9660 TCGA-E3-A3E5-01 0 1215 0 1215 NA NA 0 1215 #> 9661 TCGA-E8-A242-01 0 950 0 950 NA NA 0 950 #> 9662 TCGA-E8-A2EA-01 0 1085 0 1085 0 1085 0 1085 #> 9663 TCGA-E8-A2JQ-01 0 356 0 356 NA NA 0 356 #> 9664 TCGA-E8-A2JQ-11 0 356 0 356 NA NA 0 356 #> 9665 TCGA-E8-A3X7-01 0 951 0 951 NA NA 0 951 #> 9666 TCGA-E8-A413-01 0 912 0 912 0 912 0 912 #> 9667 TCGA-E8-A414-01 0 958 0 958 0 958 0 958 #> 9668 TCGA-E8-A415-01 0 944 0 944 0 944 0 944 #> 9669 TCGA-E8-A416-01 0 952 0 952 0 952 0 952 #> 9670 TCGA-E8-A417-01 0 938 0 938 0 938 0 938 #> 9671 TCGA-E8-A418-01 0 92 0 92 NA NA 0 92 #> 9672 TCGA-E8-A419-01 0 774 0 774 0 774 0 774 #> 9673 TCGA-E8-A432-01 0 931 0 931 1 720 1 720 #> 9674 TCGA-E8-A433-01 0 951 0 951 0 951 0 951 #> 9675 TCGA-E8-A434-01 0 953 0 953 0 953 0 953 #> 9676 TCGA-E8-A436-01 0 455 0 455 NA NA 0 455 #> 9677 TCGA-E8-A437-01 0 1213 0 1213 NA NA 0 1213 #> 9678 TCGA-E8-A438-01 0 1019 0 1019 0 1019 0 1019 #> 9679 TCGA-E8-A44K-01 0 943 0 943 0 943 0 943 #> 9680 TCGA-E8-A44M-01 0 917 0 917 0 917 0 917 #> 9681 TCGA-EL-A3CL-01 1 963 NA 963 0 963 0 963 #> 9682 TCGA-EL-A3CM-01 1 813 NA 813 NA NA 0 813 #> 9683 TCGA-EL-A3CN-01 0 4731 0 4731 NA NA 0 4731 #> 9684 TCGA-EL-A3CO-01 1 2973 NA 2973 NA NA 0 2973 #> 9685 TCGA-EL-A3CP-01 0 4831 0 4831 NA NA 0 4831 #> 9686 TCGA-EL-A3CR-01 1 233 NA 233 NA NA 0 233 #> 9687 TCGA-EL-A3CS-01 1 1385 1 1385 NA NA 1 1385 #> 9688 TCGA-EL-A3CT-01 1 1854 NA 1854 NA NA 0 1854 #> 9689 TCGA-EL-A3CU-01 0 4780 0 4780 0 4780 0 4780 #> 9690 TCGA-EL-A3CV-01 0 1154 0 1154 NA NA 0 1154 #> 9691 TCGA-EL-A3CW-01 1 1734 NA 1734 0 1734 0 1734 #> 9692 TCGA-EL-A3CX-01 0 3243 0 3243 0 3243 0 3243 #> 9693 TCGA-EL-A3CY-01 0 127 0 127 0 127 0 127 #> 9694 TCGA-EL-A3CZ-01 0 2418 0 2418 NA NA 1 1426 #> 9695 TCGA-EL-A3D0-01 0 4254 0 4254 NA NA 0 4254 #> 9696 TCGA-EL-A3D1-01 0 2997 0 2997 0 2997 0 2997 #> 9697 TCGA-EL-A3D4-01 0 2116 0 2116 NA NA 0 2116 #> 9698 TCGA-EL-A3D5-01 0 1737 0 1737 NA NA 0 1737 #> 9699 TCGA-EL-A3D6-01 0 3296 0 3296 NA NA 0 3296 #> 9700 TCGA-EL-A3GO-01 0 1973 0 1973 1 6 1 6 #> 9701 TCGA-EL-A3GP-01 0 1506 0 1506 0 1506 0 1506 #> 9702 TCGA-EL-A3GQ-01 0 1528 0 1528 0 1528 0 1528 #> 9703 TCGA-EL-A3GR-01 0 3501 0 3501 0 3501 0 3501 #> 9704 TCGA-EL-A3GS-01 0 1989 0 1989 0 1989 0 1989 #> 9705 TCGA-EL-A3GU-01 0 4137 0 4137 1 544 1 544 #> 9706 TCGA-EL-A3GV-01 0 1532 0 1532 0 1532 0 1532 #> 9707 TCGA-EL-A3GW-01 0 1527 0 1527 0 1527 0 1527 #> 9708 TCGA-EL-A3GX-01 0 4494 0 4494 1 439 1 439 #> 9709 TCGA-EL-A3GY-01 0 3076 0 3076 0 3076 0 3076 #> 9710 TCGA-EL-A3GZ-01 0 4258 0 4258 0 4258 0 4258 #> 9711 TCGA-EL-A3GZ-11 0 4258 0 4258 0 4258 0 4258 #> 9712 TCGA-EL-A3H1-01 1 1500 0 1500 0 1500 0 1500 #> 9713 TCGA-EL-A3H1-11 1 1500 0 1500 0 1500 0 1500 #> 9714 TCGA-EL-A3H2-01 1 1019 1 1019 NA NA 1 1019 #> 9715 TCGA-EL-A3H2-11 1 1019 1 1019 NA NA 1 1019 #> 9716 TCGA-EL-A3H3-01 0 1319 0 1319 0 1319 0 1319 #> 9717 TCGA-EL-A3H4-01 0 1512 0 1512 NA NA 0 1512 #> 9718 TCGA-EL-A3H5-01 0 2542 0 2542 NA NA 0 2542 #> 9719 TCGA-EL-A3H7-01 0 4228 0 4228 0 4228 0 4228 #> 9720 TCGA-EL-A3H7-11 0 4228 0 4228 0 4228 0 4228 #> 9721 TCGA-EL-A3H8-01 0 4577 0 4577 0 4577 0 4577 #> 9722 TCGA-EL-A3MW-01 0 3305 0 3305 0 3305 0 3305 #> 9723 TCGA-EL-A3MW-11 0 3305 0 3305 0 3305 0 3305 #> 9724 TCGA-EL-A3MX-01 1 1753 1 1753 NA NA 1 1708 #> 9725 TCGA-EL-A3MX-11 1 1753 1 1753 NA NA 1 1708 #> 9726 TCGA-EL-A3MY-01 1 533 1 533 NA NA 1 533 #> 9727 TCGA-EL-A3MY-11 1 533 1 533 NA NA 1 533 #> 9728 TCGA-EL-A3MZ-01 1 1597 0 1597 NA NA 0 1597 #> 9729 TCGA-EL-A3N2-01 0 902 0 902 0 902 0 902 #> 9730 TCGA-EL-A3N2-11 0 902 0 902 0 902 0 902 #> 9731 TCGA-EL-A3N3-01 0 5423 0 5423 0 5423 0 5423 #> 9732 TCGA-EL-A3N3-11 0 5423 0 5423 0 5423 0 5423 #> 9733 TCGA-EL-A3T0-01 0 4335 0 4335 0 4335 0 4335 #> 9734 TCGA-EL-A3T0-11 0 4335 0 4335 0 4335 0 4335 #> 9735 TCGA-EL-A3T1-01 0 3941 0 3941 0 3941 0 3941 #> 9736 TCGA-EL-A3T1-11 0 3941 0 3941 0 3941 0 3941 #> 9737 TCGA-EL-A3T2-01 0 988 0 988 1 903 1 903 #> 9738 TCGA-EL-A3T2-11 0 988 0 988 1 903 1 903 #> 9739 TCGA-EL-A3T3-01 0 4017 0 4017 0 4017 0 4017 #> 9740 TCGA-EL-A3T3-11 0 4017 0 4017 0 4017 0 4017 #> 9741 TCGA-EL-A3T6-01 0 2988 0 2988 0 2988 0 2988 #> 9742 TCGA-EL-A3T6-11 0 2988 0 2988 0 2988 0 2988 #> 9743 TCGA-EL-A3T7-01 0 1256 0 1256 0 1256 0 1256 #> 9744 TCGA-EL-A3T7-11 0 1256 0 1256 0 1256 0 1256 #> 9745 TCGA-EL-A3T8-01 0 3269 0 3269 0 3269 0 3269 #> 9746 TCGA-EL-A3T8-11 0 3269 0 3269 0 3269 0 3269 #> 9747 TCGA-EL-A3T9-01 1 174 1 174 NA NA 1 174 #> 9748 TCGA-EL-A3TA-01 0 2035 0 2035 0 2035 0 2035 #> 9749 TCGA-EL-A3TA-11 0 2035 0 2035 0 2035 0 2035 #> 9750 TCGA-EL-A3TB-01 0 2519 0 2519 0 2519 0 2519 #> 9751 TCGA-EL-A3TB-11 0 2519 0 2519 0 2519 0 2519 #> 9752 TCGA-EL-A3ZG-01 0 2724 0 2724 0 2724 0 2724 #> 9753 TCGA-EL-A3ZG-11 0 2724 0 2724 0 2724 0 2724 #> 9754 TCGA-EL-A3ZH-01 0 2773 0 2773 0 2773 0 2773 #> 9755 TCGA-EL-A3ZH-11 0 2773 0 2773 0 2773 0 2773 #> 9756 TCGA-EL-A3ZK-01 0 1575 0 1575 0 1575 0 1575 #> 9757 TCGA-EL-A3ZK-11 0 1575 0 1575 0 1575 0 1575 #> 9758 TCGA-EL-A3ZL-01 0 1895 0 1895 0 1895 0 1895 #> 9759 TCGA-EL-A3ZL-11 0 1895 0 1895 0 1895 0 1895 #> 9760 TCGA-EL-A3ZM-01 0 1096 0 1096 NA NA 0 1096 #> 9761 TCGA-EL-A3ZM-11 0 1096 0 1096 NA NA 0 1096 #> 9762 TCGA-EL-A3ZN-01 0 1614 0 1614 0 1614 0 1614 #> 9763 TCGA-EL-A3ZO-01 0 2211 0 2211 0 2211 0 2211 #> 9764 TCGA-EL-A3ZO-11 0 2211 0 2211 0 2211 0 2211 #> 9765 TCGA-EL-A3ZP-01 0 1992 0 1992 0 1992 0 1992 #> 9766 TCGA-EL-A3ZP-11 0 1992 0 1992 0 1992 0 1992 #> 9767 TCGA-EL-A3ZQ-01 0 1862 0 1862 0 1862 0 1862 #> 9768 TCGA-EL-A3ZQ-11 0 1862 0 1862 0 1862 0 1862 #> 9769 TCGA-EL-A3ZR-01 0 1830 0 1830 0 1830 0 1830 #> 9770 TCGA-EL-A3ZR-11 0 1830 0 1830 0 1830 0 1830 #> 9771 TCGA-EL-A3ZS-01 0 215 0 215 0 215 0 215 #> 9772 TCGA-EL-A3ZS-11 0 215 0 215 0 215 0 215 #> 9773 TCGA-EL-A3ZT-01 0 1808 0 1808 0 1808 0 1808 #> 9774 TCGA-EL-A3ZT-11 0 1808 0 1808 0 1808 0 1808 #> 9775 TCGA-EL-A4JV-01 0 1748 0 1748 0 1748 0 1748 #> 9776 TCGA-EL-A4JW-01 0 1056 0 1056 0 1056 0 1056 #> 9777 TCGA-EL-A4JX-01 0 1398 0 1398 0 1398 0 1398 #> 9778 TCGA-EL-A4JZ-01 0 1856 0 1856 0 1856 0 1856 #> 9779 TCGA-EL-A4K0-01 0 944 0 944 NA NA 0 944 #> 9780 TCGA-EL-A4K1-01 0 1046 0 1046 0 1046 0 1046 #> 9781 TCGA-EL-A4K2-01 0 928 0 928 0 928 0 928 #> 9782 TCGA-EL-A4K4-01 0 1623 0 1623 0 1623 0 1623 #> 9783 TCGA-EL-A4K6-01 0 1343 0 1343 NA NA 1 874 #> 9784 TCGA-EL-A4K7-01 0 1251 0 1251 0 1251 0 1251 #> 9785 TCGA-EL-A4K9-01 0 1455 0 1455 0 1455 0 1455 #> 9786 TCGA-EL-A4KD-01 0 1326 0 1326 0 1326 0 1326 #> 9787 TCGA-EL-A4KG-01 0 739 0 739 0 739 0 739 #> 9788 TCGA-EL-A4KH-01 0 823 0 823 0 823 0 823 #> 9789 TCGA-EL-A4KI-01 0 727 0 727 1 265 1 265 #> 9790 TCGA-EM-A1CS-01 0 817 0 817 0 817 0 817 #> 9791 TCGA-EM-A1CS-11 0 817 0 817 0 817 0 817 #> 9792 TCGA-EM-A1CT-01 0 553 0 553 NA NA 0 553 #> 9793 TCGA-EM-A1CT-11 0 553 0 553 NA NA 0 553 #> 9794 TCGA-EM-A1CU-01 0 636 0 636 NA NA 0 636 #> 9795 TCGA-EM-A1CU-11 0 636 0 636 NA NA 0 636 #> 9796 TCGA-EM-A1CV-01 0 1475 0 1475 NA NA 0 1475 #> 9797 TCGA-EM-A1CV-11 0 1475 0 1475 NA NA 0 1475 #> 9798 TCGA-EM-A1CW-01 0 549 0 549 0 549 0 549 #> 9799 TCGA-EM-A1CW-11 0 549 0 549 0 549 0 549 #> 9800 TCGA-EM-A1YA-01 0 602 0 602 0 602 0 602 #> 9801 TCGA-EM-A1YB-01 0 592 0 592 0 592 0 592 #> 9802 TCGA-EM-A1YC-01 0 2391 0 2391 0 2391 0 2391 #> 9803 TCGA-EM-A1YC-11 0 2391 0 2391 0 2391 0 2391 #> 9804 TCGA-EM-A1YD-01 0 1734 0 1734 0 1734 0 1734 #> 9805 TCGA-EM-A1YE-01 0 1645 0 1645 0 1645 0 1645 #> 9806 TCGA-EM-A22I-01 0 448 0 448 NA NA 0 448 #> 9807 TCGA-EM-A22J-01 0 441 0 441 NA NA 0 441 #> 9808 TCGA-EM-A22K-01 0 479 0 479 NA NA 0 479 #> 9809 TCGA-EM-A22L-01 0 318 0 318 0 318 0 318 #> 9810 TCGA-EM-A22M-01 0 442 0 442 0 442 0 442 #> 9811 TCGA-EM-A22N-01 0 324 0 324 NA NA 0 324 #> 9812 TCGA-EM-A22O-01 0 1344 0 1344 NA NA 0 1344 #> 9813 TCGA-EM-A22P-01 0 1256 0 1256 NA NA 0 1256 #> 9814 TCGA-EM-A22Q-01 0 433 0 433 0 433 0 433 #> 9815 TCGA-EM-A2CJ-01 0 1447 0 1447 0 1447 0 1447 #> 9816 TCGA-EM-A2CK-01 0 544 0 544 0 544 0 544 #> 9817 TCGA-EM-A2CL-01 0 401 0 401 0 401 0 401 #> 9818 TCGA-EM-A2CM-01 0 1253 0 1253 0 1253 0 1253 #> 9819 TCGA-EM-A2CN-01 0 715 0 715 NA NA 0 715 #> 9820 TCGA-EM-A2CO-01 0 184 0 184 0 184 0 184 #> 9821 TCGA-EM-A2CP-01 0 91 0 91 0 91 0 91 #> 9822 TCGA-EM-A2CQ-01 0 374 0 374 0 374 0 374 #> 9823 TCGA-EM-A2CR-01 0 415 0 415 0 415 0 415 #> 9824 TCGA-EM-A2CS-06 0 841 0 841 NA NA 0 841 #> 9825 TCGA-EM-A2CS-01 0 841 0 841 NA NA 0 841 #> 9826 TCGA-EM-A2CT-01 0 1474 0 1474 0 1474 0 1474 #> 9827 TCGA-EM-A2CU-01 0 400 0 400 0 400 0 400 #> 9828 TCGA-EM-A2OV-01 0 674 0 674 0 674 0 674 #> 9829 TCGA-EM-A2OW-01 0 1227 0 1227 0 1227 0 1227 #> 9830 TCGA-EM-A2OX-01 0 600 0 600 NA NA 0 600 #> 9831 TCGA-EM-A2OY-01 0 983 0 983 0 983 0 983 #> 9832 TCGA-EM-A2OZ-01 0 1033 0 1033 0 1033 0 1033 #> 9833 TCGA-EM-A2P0-01 0 535 0 535 0 535 0 535 #> 9834 TCGA-EM-A2P1-06 0 531 0 531 1 363 1 363 #> 9835 TCGA-EM-A2P1-01 0 531 0 531 1 363 1 363 #> 9836 TCGA-EM-A2P2-01 0 526 0 526 0 526 0 526 #> 9837 TCGA-EM-A2P3-01 0 444 0 444 0 444 0 444 #> 9838 TCGA-EM-A3AI-01 0 685 0 685 0 685 0 685 #> 9839 TCGA-EM-A3AJ-01 0 941 0 941 NA NA 0 941 #> 9840 TCGA-EM-A3AK-01 0 477 0 477 0 477 0 477 #> 9841 TCGA-EM-A3AL-01 0 430 0 430 0 430 0 430 #> 9842 TCGA-EM-A3AN-01 0 1006 0 1006 NA NA 0 1006 #> 9843 TCGA-EM-A3AO-01 0 1354 0 1354 NA NA 0 1354 #> 9844 TCGA-EM-A3AP-01 0 254 0 254 0 254 0 254 #> 9845 TCGA-EM-A3AQ-01 0 904 0 904 0 904 0 904 #> 9846 TCGA-EM-A3AR-01 0 1133 0 1133 0 1133 0 1133 #> 9847 TCGA-EM-A3FJ-01 0 850 0 850 0 850 0 850 #> 9848 TCGA-EM-A3FK-01 0 723 0 723 0 723 0 723 #> 9849 TCGA-EM-A3FL-01 0 1441 0 1441 0 1441 0 1441 #> 9850 TCGA-EM-A3FM-01 0 639 0 639 NA NA 1 514 #> 9851 TCGA-EM-A3FN-01 0 367 0 367 0 367 0 367 #> 9852 TCGA-EM-A3FO-01 0 532 0 532 0 532 0 532 #> 9853 TCGA-EM-A3FP-01 0 529 0 529 0 529 0 529 #> 9854 TCGA-EM-A3FQ-06 0 492 0 492 0 492 0 492 #> 9855 TCGA-EM-A3FQ-01 0 492 0 492 0 492 0 492 #> 9856 TCGA-EM-A3FR-01 0 457 0 457 0 457 0 457 #> 9857 TCGA-EM-A3O3-01 0 441 0 441 0 441 0 441 #> 9858 TCGA-EM-A3O6-01 0 458 0 458 0 458 0 458 #> 9859 TCGA-EM-A3O7-01 0 223 0 223 0 223 0 223 #> 9860 TCGA-EM-A3O8-01 0 381 0 381 0 381 0 381 #> 9861 TCGA-EM-A3O9-01 0 281 0 281 0 281 0 281 #> 9862 TCGA-EM-A3OA-01 0 822 0 822 0 822 0 822 #> 9863 TCGA-EM-A3OB-01 0 1176 0 1176 0 1176 0 1176 #> 9864 TCGA-EM-A3ST-01 0 1182 0 1182 1 966 1 966 #> 9865 TCGA-EM-A3ST-11 0 1182 0 1182 1 966 1 966 #> 9866 TCGA-EM-A3SU-06 0 911 0 911 0 911 0 911 #> 9867 TCGA-EM-A3SU-01 0 911 0 911 0 911 0 911 #> 9868 TCGA-EM-A3SX-01 0 908 0 908 NA NA 0 908 #> 9869 TCGA-EM-A3SY-01 0 411 0 411 0 411 0 411 #> 9870 TCGA-EM-A3SZ-01 0 389 0 389 0 389 0 389 #> 9871 TCGA-EM-A4FF-01 0 2573 0 2573 NA NA 1 1785 #> 9872 TCGA-EM-A4FH-01 0 892 0 892 0 892 0 892 #> 9873 TCGA-EM-A4FK-01 0 649 0 649 0 649 0 649 #> 9874 TCGA-EM-A4FM-01 0 162 0 162 NA NA 0 162 #> 9875 TCGA-EM-A4FN-01 0 802 0 802 NA NA 0 802 #> 9876 TCGA-EM-A4FO-01 0 802 0 802 0 802 0 802 #> 9877 TCGA-EM-A4FQ-01 0 683 0 683 0 683 0 683 #> 9878 TCGA-EM-A4FR-01 0 655 0 655 0 655 0 655 #> 9879 TCGA-EM-A4FU-01 0 1840 0 1840 1 781 1 781 #> 9880 TCGA-EM-A4FV-01 0 744 0 744 0 744 0 744 #> 9881 TCGA-EM-A4G1-01 0 416 0 416 0 416 0 416 #> 9882 TCGA-ET-A25G-01 0 2492 0 2492 0 2492 0 2492 #> 9883 TCGA-ET-A25I-01 0 2485 0 2485 0 2485 0 2485 #> 9884 TCGA-ET-A25J-01 0 2359 0 2359 0 2359 0 2359 #> 9885 TCGA-ET-A25K-01 0 2142 0 2142 0 2142 0 2142 #> 9886 TCGA-ET-A25L-01 0 1721 0 1721 NA NA 0 1721 #> 9887 TCGA-ET-A25M-01 0 1831 0 1831 0 1831 0 1831 #> 9888 TCGA-ET-A25N-01 0 1928 0 1928 0 1928 0 1928 #> 9889 TCGA-ET-A25O-01 0 1986 0 1986 0 1986 0 1986 #> 9890 TCGA-ET-A25P-01 0 559 0 559 0 559 0 559 #> 9891 TCGA-ET-A25R-01 0 1930 0 1930 0 1930 0 1930 #> 9892 TCGA-ET-A2MX-01 0 2689 0 2689 0 2689 0 2689 #> 9893 TCGA-ET-A2MX-11 0 2689 0 2689 0 2689 0 2689 #> 9894 TCGA-ET-A2MY-01 0 1787 0 1787 0 1787 0 1787 #> 9895 TCGA-ET-A2MZ-01 0 1133 0 1133 NA NA 0 1133 #> 9896 TCGA-ET-A2N0-01 0 1600 0 1600 0 1600 0 1600 #> 9897 TCGA-ET-A2N3-01 0 2535 0 2535 NA NA 0 2535 #> 9898 TCGA-ET-A2N4-01 0 81 0 81 NA NA 0 81 #> 9899 TCGA-ET-A2N5-01 0 2460 0 2460 NA NA 0 2460 #> 9900 TCGA-ET-A2N5-11 0 2460 0 2460 NA NA 0 2460 #> 9901 TCGA-ET-A39I-01 1 1011 0 1011 0 1011 0 1011 #> 9902 TCGA-ET-A39J-01 0 3227 0 3227 0 3227 0 3227 #> 9903 TCGA-ET-A39K-01 0 3267 0 3267 NA NA 1 711 #> 9904 TCGA-ET-A39L-01 0 3299 0 3299 0 3299 0 3299 #> 9905 TCGA-ET-A39M-01 0 2582 0 2582 0 2582 0 2582 #> 9906 TCGA-ET-A39N-01 0 3751 0 3751 0 3751 0 3751 #> 9907 TCGA-ET-A39O-01 0 3059 0 3059 0 3059 0 3059 #> 9908 TCGA-ET-A39P-01 0 2900 0 2900 NA NA 0 2900 #> 9909 TCGA-ET-A39R-01 0 2863 0 2863 0 2863 0 2863 #> 9910 TCGA-ET-A39S-01 0 1676 0 1676 0 1676 0 1676 #> 9911 TCGA-ET-A39T-01 0 2987 0 2987 0 2987 0 2987 #> 9912 TCGA-ET-A3BN-01 0 859 0 859 0 859 0 859 #> 9913 TCGA-ET-A3BO-01 0 1533 0 1533 NA NA 0 1533 #> 9914 TCGA-ET-A3BP-01 0 2406 0 2406 0 2406 0 2406 #> 9915 TCGA-ET-A3BQ-01 0 2331 0 2331 0 2331 0 2331 #> 9916 TCGA-ET-A3BS-01 0 176 0 176 0 176 0 176 #> 9917 TCGA-ET-A3BT-01 0 2665 0 2665 NA NA 1 267 #> 9918 TCGA-ET-A3BU-01 0 2367 0 2367 0 2367 0 2367 #> 9919 TCGA-ET-A3BV-01 0 2294 0 2294 1 1204 1 1204 #> 9920 TCGA-ET-A3BW-01 0 1419 0 1419 0 1419 0 1419 #> 9921 TCGA-ET-A3BX-01 0 1596 0 1596 0 1596 0 1596 #> 9922 TCGA-ET-A3DO-01 0 3552 0 3552 1 570 1 570 #> 9923 TCGA-ET-A3DP-01 0 2877 0 2877 0 2877 0 2877 #> 9924 TCGA-ET-A3DP-11 0 2877 0 2877 0 2877 0 2877 #> 9925 TCGA-ET-A3DQ-01 0 2581 0 2581 0 2581 0 2581 #> 9926 TCGA-ET-A3DR-01 0 2451 0 2451 0 2451 0 2451 #> 9927 TCGA-ET-A3DS-01 0 2033 0 2033 0 2033 0 2033 #> 9928 TCGA-ET-A3DT-01 0 1330 0 1330 0 1330 0 1330 #> 9929 TCGA-ET-A3DU-01 0 1911 0 1911 NA NA 0 1911 #> 9930 TCGA-ET-A3DV-01 0 5068 0 5068 0 5068 0 5068 #> 9931 TCGA-ET-A3DW-01 0 752 0 752 0 752 0 752 #> 9932 TCGA-ET-A3DW-11 0 752 0 752 0 752 0 752 #> 9933 TCGA-ET-A40P-01 0 1338 0 1338 0 1338 0 1338 #> 9934 TCGA-ET-A40Q-01 0 1407 0 1407 1 218 1 218 #> 9935 TCGA-ET-A40R-01 0 1350 0 1350 NA NA 0 1350 #> 9936 TCGA-ET-A40S-01 0 1223 0 1223 NA NA 0 1223 #> 9937 TCGA-ET-A40T-01 0 1140 0 1140 NA NA 0 1140 #> 9938 TCGA-ET-A4KN-01 0 1009 0 1009 0 1009 0 1009 #> 9939 TCGA-ET-A4KQ-01 0 955 0 955 0 955 0 955 #> 9940 TCGA-FE-A22Z-01 0 2243 0 2243 NA NA 1 1215 #> 9941 TCGA-FE-A230-01 0 2173 0 2173 1 526 1 526 #> 9942 TCGA-FE-A231-01 0 961 0 961 NA NA 0 961 #> 9943 TCGA-FE-A232-01 0 2424 0 2424 0 2424 0 2424 #> 9944 TCGA-FE-A233-01 0 751 0 751 1 567 1 567 #> 9945 TCGA-FE-A234-01 0 2075 0 2075 1 483 1 483 #> 9946 TCGA-FE-A235-01 0 3571 0 3571 0 3571 0 3571 #> 9947 TCGA-FE-A236-01 0 2031 0 2031 0 2031 0 2031 #> 9948 TCGA-FE-A237-01 0 3431 0 3431 1 492 1 492 #> 9949 TCGA-FE-A238-01 0 1215 0 1215 1 431 1 431 #> 9950 TCGA-FE-A239-01 1 1023 1 1023 1 933 1 933 #> 9951 TCGA-FE-A23A-01 0 2489 0 2489 0 2489 0 2489 #> 9952 TCGA-FE-A3PA-01 0 3235 0 3235 NA NA 0 3235 #> 9953 TCGA-FE-A3PB-01 0 2590 0 2590 0 2590 0 2590 #> 9954 TCGA-FE-A3PC-01 0 2606 0 2606 0 2606 0 2606 #> 9955 TCGA-FE-A3PD-01 0 2396 0 2396 0 2396 0 2396 #> 9956 TCGA-FK-A3S3-01 0 2162 0 2162 0 2162 0 2162 #> 9957 TCGA-FK-A3SB-01 0 125 0 125 0 125 0 125 #> 9958 TCGA-FK-A3SD-01 0 32 0 32 0 32 0 32 #> 9959 TCGA-FK-A3SE-01 0 670 0 670 0 670 0 670 #> 9960 TCGA-FK-A3SG-01 0 28 0 28 0 28 0 28 #> 9961 TCGA-FK-A3SH-01 0 1463 0 1463 0 1463 0 1463 #> 9962 TCGA-FK-A4UB-01 0 3531 0 3531 NA NA 0 3531 #> 9963 TCGA-FY-A2QD-01 0 38 0 38 NA NA 0 38 #> 9964 TCGA-FY-A3BL-01 0 621 0 621 0 621 0 621 #> 9965 TCGA-FY-A3I4-01 0 542 0 542 0 542 0 542 #> 9966 TCGA-FY-A3I5-01 0 238 0 238 0 238 0 238 #> 9967 TCGA-FY-A3NM-01 0 885 0 885 0 885 0 885 #> 9968 TCGA-FY-A3NN-01 0 0 0 0 0 0 0 0 #> 9969 TCGA-FY-A3NP-01 0 491 0 491 0 491 0 491 #> 9970 TCGA-FY-A3ON-01 0 595 0 595 0 595 0 595 #> 9971 TCGA-FY-A3R6-01 0 423 0 423 NA NA 0 423 #> 9972 TCGA-FY-A3R7-01 0 495 0 495 NA NA 0 495 #> 9973 TCGA-FY-A3R8-01 0 477 0 477 0 477 0 477 #> 9974 TCGA-FY-A3R9-01 0 504 0 504 0 504 0 504 #> 9975 TCGA-FY-A3RA-01 0 550 0 550 0 550 0 550 #> 9976 TCGA-FY-A3TY-01 0 709 0 709 0 709 0 709 #> 9977 TCGA-FY-A3TY-11 0 709 0 709 0 709 0 709 #> 9978 TCGA-FY-A3W9-01 0 658 0 658 NA NA 0 658 #> 9979 TCGA-FY-A3WA-01 0 519 0 519 0 519 0 519 #> 9980 TCGA-FY-A3YR-01 0 528 0 528 0 528 0 528 #> 9981 TCGA-FY-A40K-01 0 461 0 461 0 461 0 461 #> 9982 TCGA-FY-A40L-01 0 726 0 726 NA NA 0 726 #> 9983 TCGA-FY-A40M-01 0 684 0 684 0 684 0 684 #> 9984 TCGA-FY-A40N-01 0 579 0 579 0 579 0 579 #> 9985 TCGA-FY-A4B0-01 0 420 0 420 NA NA 0 420 #> 9986 TCGA-FY-A4B3-01 0 427 0 427 NA NA 0 427 #> 9987 TCGA-FY-A4B4-01 0 657 0 657 NA NA 0 657 #> 9988 TCGA-FY-A76V-01 0 51 0 51 0 51 0 51 #> 9989 TCGA-GE-A2C6-01 0 381 0 381 NA NA 0 381 #> 9990 TCGA-GE-A2C6-11 0 381 0 381 NA NA 0 381 #> 9991 TCGA-H2-A26U-01 0 517 0 517 NA NA 0 517 #> 9992 TCGA-H2-A2K9-01 0 659 0 659 NA NA 0 659 #> 9993 TCGA-H2-A2K9-11 0 659 0 659 NA NA 0 659 #> 9994 TCGA-H2-A3RH-01 0 379 0 379 NA NA 0 379 #> 9995 TCGA-H2-A3RI-01 0 335 0 335 NA NA 1 279 #> 9996 TCGA-H2-A3RI-11 0 335 0 335 NA NA 1 279 #> 9997 TCGA-H2-A421-01 0 610 0 610 NA NA 0 610 #> 9998 TCGA-H2-A422-01 0 566 0 566 NA NA 0 566 #> 9999 TCGA-IM-A3EB-01 0 1488 0 1488 0 1488 0 1488 #> 10000 TCGA-IM-A3ED-01 0 1442 0 1442 0 1442 0 1442 #> 10001 TCGA-IM-A3U2-01 0 563 0 563 NA NA 0 563 #> 10002 TCGA-IM-A3U3-01 0 514 0 514 NA NA 0 514 #> 10003 TCGA-IM-A41Y-01 0 664 0 664 0 664 0 664 #> 10004 TCGA-IM-A41Z-01 0 946 0 946 0 946 0 946 #> 10005 TCGA-IM-A420-01 0 250 0 250 0 250 0 250 #> 10006 TCGA-IM-A4EB-01 0 780 0 780 0 780 0 780 #> 10007 TCGA-J8-A3NZ-01 0 524 0 524 0 524 0 524 #> 10008 TCGA-J8-A3O0-01 0 1313 0 1313 0 1313 0 1313 #> 10009 TCGA-J8-A3O1-01 0 827 0 827 0 827 0 827 #> 10010 TCGA-J8-A3O2-06 0 342 0 342 NA NA 0 342 #> 10011 TCGA-J8-A3O2-01 0 342 0 342 NA NA 0 342 #> 10012 TCGA-J8-A3YD-01 0 968 0 968 0 968 0 968 #> 10013 TCGA-J8-A3YE-01 0 847 0 847 0 847 0 847 #> 10014 TCGA-J8-A3YF-01 0 751 0 751 0 751 0 751 #> 10015 TCGA-J8-A3YG-01 0 678 0 678 0 678 0 678 #> 10016 TCGA-J8-A3YH-06 0 175 0 175 0 175 0 175 #> 10017 TCGA-J8-A3YH-01 0 175 0 175 0 175 0 175 #> 10018 TCGA-J8-A42S-01 0 75 0 75 0 75 0 75 #> 10019 TCGA-J8-A4HW-06 0 79 0 79 0 79 0 79 #> 10020 TCGA-J8-A4HW-01 0 79 0 79 0 79 0 79 #> 10021 TCGA-J8-A4HY-01 0 6 0 6 NA NA 0 6 #> 10022 TCGA-KS-A41F-01 0 4367 0 4367 0 4367 0 4367 #> 10023 TCGA-KS-A41I-01 0 486 0 486 0 486 0 486 #> 10024 TCGA-KS-A41I-11 0 486 0 486 0 486 0 486 #> 10025 TCGA-KS-A41J-01 0 477 0 477 0 477 0 477 #> 10026 TCGA-KS-A41J-11 0 477 0 477 0 477 0 477 #> 10027 TCGA-KS-A41L-01 0 3463 0 3463 0 3463 0 3463 #> 10028 TCGA-KS-A41L-11 0 3463 0 3463 0 3463 0 3463 #> 10029 TCGA-KS-A4I1-01 0 812 0 812 NA NA 0 812 #> 10030 TCGA-KS-A4I3-01 0 1329 0 1329 NA NA 0 1329 #> 10031 TCGA-KS-A4I5-01 0 567 0 567 NA NA 0 567 #> 10032 TCGA-KS-A4I7-01 0 987 0 987 0 987 0 987 #> 10033 TCGA-KS-A4I9-01 0 2658 0 2658 0 2658 0 2658 #> 10034 TCGA-KS-A4IB-01 0 2577 0 2577 0 2577 0 2577 #> 10035 TCGA-KS-A4IC-01 0 1073 0 1073 NA NA 0 1073 #> 10036 TCGA-KS-A4ID-01 0 1011 0 1011 0 1011 0 1011 #> 10037 TCGA-L6-A4EP-01 0 1016 0 1016 0 1016 0 1016 #> 10038 TCGA-L6-A4EQ-01 0 1228 0 1228 0 1228 0 1228 #> 10039 TCGA-L6-A4ET-01 0 664 0 664 NA NA 0 664 #> 10040 TCGA-L6-A4EU-01 0 289 0 289 NA NA 0 289 #> 10041 TCGA-MK-A4N6-01 0 1098 0 1098 0 1098 0 1098 #> 10042 TCGA-MK-A4N7-01 0 987 0 987 0 987 0 987 #> 10043 TCGA-MK-A4N9-01 0 919 0 919 0 919 0 919 #> 10044 TCGA-MK-A84Z-01 0 728 0 728 NA NA 0 728 #> 10045 TCGA-QD-A8IV-01 0 392 0 392 NA NA 0 392 #> 10046 TCGA-3G-AB0O-01 0 2086 0 2086 NA NA 0 2086 #> 10047 TCGA-3G-AB0Q-01 0 1799 0 1799 NA NA 0 1799 #> 10048 TCGA-3G-AB0T-01 1 2488 1 2488 NA NA 1 1786 #> 10049 TCGA-3G-AB19-01 1 2910 0 2910 NA NA 1 2420 #> 10050 TCGA-3Q-A9WF-01 0 467 0 467 NA NA 0 467 #> 10051 TCGA-3S-A8YW-01 0 643 0 643 NA NA 1 224 #> 10052 TCGA-3S-AAYX-01 0 571 0 571 NA NA 0 571 #> 10053 TCGA-3T-AA9L-01 0 1050 0 1050 NA NA 1 702 #> 10054 TCGA-4V-A9QI-01 0 2936 0 2936 NA NA 0 2936 #> 10055 TCGA-4V-A9QJ-01 0 2849 0 2849 NA NA 1 793 #> 10056 TCGA-4V-A9QL-01 0 1908 0 1908 NA NA 0 1908 #> 10057 TCGA-4V-A9QM-01 0 1253 0 1253 NA NA 0 1253 #> 10058 TCGA-4V-A9QN-01 0 970 0 970 NA NA 1 937 #> 10059 TCGA-4V-A9QR-01 0 780 0 780 NA NA 0 780 #> 10060 TCGA-4V-A9QS-01 0 774 0 774 NA NA 1 752 #> 10061 TCGA-4V-A9QT-01 0 813 0 813 NA NA 0 813 #> 10062 TCGA-4V-A9QU-01 0 627 0 627 NA NA 0 627 #> 10063 TCGA-4V-A9QW-01 0 630 0 630 NA NA 0 630 #> 10064 TCGA-4V-A9QX-01 0 434 0 434 NA NA 0 434 #> 10065 TCGA-4X-A9F9-01 0 669 0 669 NA NA 0 669 #> 10066 TCGA-4X-A9FA-01 0 392 0 392 NA NA 0 392 #> 10067 TCGA-4X-A9FB-01 0 717 0 717 NA NA 0 717 #> 10068 TCGA-4X-A9FC-01 0 2072 0 2072 NA NA 0 2072 #> 10069 TCGA-4X-A9FD-01 0 1503 0 1503 NA NA 0 1503 #> 10070 TCGA-5G-A9ZZ-01 0 835 0 835 NA NA 0 835 #> 10071 TCGA-5K-AAAP-01 0 1054 0 1054 NA NA 0 1054 #> 10072 TCGA-5U-AB0D-01 0 714 0 714 NA NA 0 714 #> 10073 TCGA-5U-AB0E-01 0 687 0 687 NA NA 0 687 #> 10074 TCGA-5U-AB0F-01 0 459 0 459 NA NA 0 459 #> 10075 TCGA-5V-A9RR-01 0 827 0 827 NA NA 0 827 #> 10076 TCGA-X7-A8D6-01 0 4225 0 4225 NA NA 1 2928 #> 10077 TCGA-X7-A8D6-11 0 4225 0 4225 NA NA 1 2928 #> 10078 TCGA-X7-A8D7-01 0 325 0 325 NA NA 1 265 #> 10079 TCGA-X7-A8D7-11 0 325 0 325 NA NA 1 265 #> 10080 TCGA-X7-A8D8-01 0 58 0 58 NA NA 0 58 #> 10081 TCGA-X7-A8D9-01 0 NA 0 NA NA NA 0 NA #> 10082 TCGA-X7-A8DB-01 0 1992 0 1992 NA NA 0 1992 #> 10083 TCGA-X7-A8DD-01 0 1114 0 1114 NA NA 0 1114 #> 10084 TCGA-X7-A8DE-01 0 981 0 981 NA NA 0 981 #> 10085 TCGA-X7-A8DF-01 0 901 0 901 NA NA 0 901 #> 10086 TCGA-X7-A8DG-01 0 695 0 695 NA NA 0 695 #> 10087 TCGA-X7-A8DJ-01 0 289 0 289 NA NA 0 289 #> 10088 TCGA-X7-A8M0-01 0 441 0 441 NA NA 0 441 #> 10089 TCGA-X7-A8M1-01 0 1282 0 1282 NA NA 0 1282 #> 10090 TCGA-X7-A8M3-01 0 50 0 50 NA NA 0 50 #> 10091 TCGA-X7-A8M4-01 0 3808 0 3808 NA NA 0 3808 #> 10092 TCGA-X7-A8M5-01 0 1645 0 1645 NA NA 0 1645 #> 10093 TCGA-X7-A8M6-01 0 4575 0 4575 NA NA 1 1901 #> 10094 TCGA-X7-A8M7-01 0 1972 0 1972 NA NA 0 1972 #> 10095 TCGA-X7-A8M8-01 0 2533 0 2533 NA NA 0 2533 #> 10096 TCGA-XH-A853-01 0 1220 0 1220 NA NA 1 196 #> 10097 TCGA-XM-A8R8-01 0 1598 0 1598 NA NA 1 244 #> 10098 TCGA-XM-A8R9-01 0 1488 0 1488 NA NA 0 1488 #> 10099 TCGA-XM-A8RB-01 0 1144 0 1144 NA NA 0 1144 #> 10100 TCGA-XM-A8RC-01 0 2963 0 2963 NA NA 0 2963 #> 10101 TCGA-XM-A8RD-01 0 1546 0 1546 NA NA 0 1546 #> 10102 TCGA-XM-A8RE-01 0 422 0 422 NA NA 0 422 #> 10103 TCGA-XM-A8RF-01 0 797 0 797 NA NA 0 797 #> 10104 TCGA-XM-A8RG-01 0 386 0 386 NA NA 0 386 #> 10105 TCGA-XM-A8RH-01 0 363 0 363 NA NA 0 363 #> 10106 TCGA-XM-A8RI-01 0 387 0 387 NA NA 0 387 #> 10107 TCGA-XM-A8RL-01 0 2562 0 2562 NA NA 0 2562 #> 10108 TCGA-XM-AAZ1-01 0 397 0 397 NA NA 0 397 #> 10109 TCGA-XM-AAZ2-01 0 981 0 981 NA NA 0 981 #> 10110 TCGA-XM-AAZ3-01 0 1150 0 1150 NA NA 0 1150 #> 10111 TCGA-XU-A92O-01 0 3410 0 3410 NA NA 0 3410 #> 10112 TCGA-XU-A92Q-01 0 1092 0 1092 NA NA 0 1092 #> 10113 TCGA-XU-A92T-01 0 1376 0 1376 NA NA 0 1376 #> 10114 TCGA-XU-A92U-01 0 4562 0 4562 NA NA 0 4562 #> 10115 TCGA-XU-A92V-01 1 124 0 124 NA NA 0 124 #> 10116 TCGA-XU-A92W-01 0 3279 0 3279 NA NA 0 3279 #> 10117 TCGA-XU-A92X-01 0 2343 0 2343 NA NA 0 2343 #> 10118 TCGA-XU-A92Y-01 1 3488 1 3488 NA NA 1 1224 #> 10119 TCGA-XU-A92Z-01 0 3663 0 3663 NA NA 0 3663 #> 10120 TCGA-XU-A930-01 0 2514 0 2514 NA NA 0 2514 #> 10121 TCGA-XU-A931-01 1 1609 0 1609 NA NA 1 1377 #> 10122 TCGA-XU-A932-01 0 2149 0 2149 NA NA 0 2149 #> 10123 TCGA-XU-A933-01 0 1789 0 1789 NA NA 0 1789 #> 10124 TCGA-XU-A936-01 0 643 0 643 NA NA 0 643 #> 10125 TCGA-XU-AAXV-01 0 4070 0 4070 NA NA 0 4070 #> 10126 TCGA-XU-AAXW-01 0 3762 0 3762 NA NA 0 3762 #> 10127 TCGA-XU-AAXX-01 0 2721 0 2721 NA NA 0 2721 #> 10128 TCGA-XU-AAXY-01 0 1891 0 1891 NA NA 0 1891 #> 10129 TCGA-XU-AAXZ-01 0 1537 0 1537 NA NA 0 1537 #> 10130 TCGA-XU-AAY0-01 0 1502 0 1502 NA NA 0 1502 #> 10131 TCGA-XU-AAY1-01 0 3268 0 3268 NA NA 0 3268 #> 10132 TCGA-YT-A95D-01 0 750 0 750 NA NA 1 168 #> 10133 TCGA-YT-A95E-01 0 1070 0 1070 NA NA 0 1070 #> 10134 TCGA-YT-A95F-01 0 775 0 775 NA NA 0 775 #> 10135 TCGA-YT-A95G-01 0 1514 0 1514 NA NA 0 1514 #> 10136 TCGA-YT-A95H-01 0 711 0 711 NA NA 0 711 #> 10137 TCGA-ZB-A961-01 1 180 0 180 NA NA 0 180 #> 10138 TCGA-ZB-A962-01 0 1647 0 1647 NA NA 1 1091 #> 10139 TCGA-ZB-A963-01 0 1482 0 1482 NA NA 0 1482 #> 10140 TCGA-ZB-A964-01 0 1287 0 1287 NA NA 0 1287 #> 10141 TCGA-ZB-A965-01 0 816 0 816 NA NA 0 816 #> 10142 TCGA-ZB-A966-01 1 379 1 379 NA NA 1 296 #> 10143 TCGA-ZB-A969-01 0 1046 0 1046 NA NA 0 1046 #> 10144 TCGA-ZB-A96A-01 0 2354 0 2354 NA NA 0 2354 #> 10145 TCGA-ZB-A96B-01 0 2211 0 2211 NA NA 1 91 #> 10146 TCGA-ZB-A96C-01 0 2163 0 2163 NA NA 0 2163 #> 10147 TCGA-ZB-A96D-01 0 1960 0 1960 NA NA 0 1960 #> 10148 TCGA-ZB-A96E-01 0 1819 0 1819 NA NA 0 1819 #> 10149 TCGA-ZB-A96F-01 0 1761 0 1761 NA NA 0 1761 #> 10150 TCGA-ZB-A96G-01 0 1606 0 1606 NA NA 0 1606 #> 10151 TCGA-ZB-A96H-01 0 1504 0 1504 NA NA 0 1504 #> 10152 TCGA-ZB-A96I-01 0 1653 0 1653 NA NA 0 1653 #> 10153 TCGA-ZB-A96K-01 0 1388 0 1388 NA NA 0 1388 #> 10154 TCGA-ZB-A96L-01 0 1529 0 1529 NA NA 0 1529 #> 10155 TCGA-ZB-A96M-01 0 14 0 14 NA NA 0 14 #> 10156 TCGA-ZB-A96O-01 0 1050 0 1050 NA NA 0 1050 #> 10157 TCGA-ZB-A96P-01 0 753 0 753 NA NA 0 753 #> 10158 TCGA-ZB-A96Q-01 0 675 0 675 NA NA 0 675 #> 10159 TCGA-ZB-A96R-01 0 1804 0 1804 NA NA 0 1804 #> 10160 TCGA-ZB-A96V-01 0 932 0 932 NA NA 0 932 #> 10161 TCGA-ZC-AAA7-01 1 853 1 853 NA NA 1 853 #> 10162 TCGA-ZC-AAAA-01 0 819 0 819 NA NA 1 137 #> 10163 TCGA-ZC-AAAF-01 0 1165 0 1165 NA NA 0 1165 #> 10164 TCGA-ZC-AAAH-01 0 497 0 497 NA NA 1 166 #> 10165 TCGA-ZL-A9V6-01 0 2096 0 2096 NA NA 0 2096 #> 10166 TCGA-ZT-A8OM-01 0 1398 0 1398 NA NA 0 1398 #> 10167 TCGA-2E-A9G8-01 0 1249 0 1249 NA NA 1 335 #> 10168 TCGA-4E-A92E-01 0 13 0 13 0 13 0 13 #> 10169 TCGA-5B-A90C-01 0 1202 0 1202 NA NA 1 517 #> 10170 TCGA-5S-A9Q8-01 0 313 0 313 0 313 0 313 #> 10171 TCGA-A5-A1OH-01 0 1105 0 1105 0 1105 0 1105 #> 10172 TCGA-A5-A2K2-01 0 3595 0 3595 0 3595 0 3595 #> 10173 TCGA-A5-A2K3-01 0 2012 0 2012 0 2012 0 2012 #> 10174 TCGA-A5-A2K4-01 1 871 1 871 1 528 1 528 #> 10175 TCGA-A5-A2K5-01 0 752 0 752 0 752 0 752 #> 10176 TCGA-A5-A2K7-01 0 1063 0 1063 0 1063 0 1063 #> 10177 TCGA-A5-A3LO-01 0 776 0 776 0 776 0 776 #> 10178 TCGA-A5-A3LP-01 0 455 0 455 0 455 0 455 #> 10179 TCGA-A5-A7WJ-01 0 341 0 341 0 341 0 341 #> 10180 TCGA-A5-A7WK-01 0 560 0 560 1 350 1 350 #> 10181 TCGA-A5-AB3J-01 0 512 0 512 0 512 0 512 #> 10182 TCGA-AJ-A23N-01 1 439 1 439 NA NA 1 439 #> 10183 TCGA-AJ-A2QM-01 0 894 0 894 0 894 0 894 #> 10184 TCGA-AJ-A2QO-01 1 1045 0 1045 0 1045 0 1045 #> 10185 TCGA-AJ-A3BD-01 0 1039 0 1039 0 1039 0 1039 #> 10186 TCGA-AJ-A3BF-01 0 551 0 551 1 384 1 384 #> 10187 TCGA-AJ-A3BG-01 0 550 0 550 1 480 1 480 #> 10188 TCGA-AJ-A3BH-01 0 NA 0 NA NA NA 0 NA #> 10189 TCGA-AJ-A3BI-01 0 575 0 575 NA NA 1 373 #> 10190 TCGA-AJ-A3BK-01 0 1031 0 1031 0 1031 0 1031 #> 10191 TCGA-AJ-A3EJ-01 1 50 1 50 NA NA 1 50 #> 10192 TCGA-AJ-A3EK-01 0 446 0 446 0 446 0 446 #> 10193 TCGA-AJ-A3EL-01 0 684 0 684 0 684 0 684 #> 10194 TCGA-AJ-A3EM-01 0 677 0 677 0 677 0 677 #> 10195 TCGA-AJ-A3I9-01 1 519 1 519 1 370 1 370 #> 10196 TCGA-AJ-A3IA-01 0 633 0 633 0 633 0 633 #> 10197 TCGA-AJ-A3NC-01 0 1125 0 1125 0 1125 0 1125 #> 10198 TCGA-AJ-A3NC-11 0 1125 0 1125 0 1125 0 1125 #> 10199 TCGA-AJ-A3NE-01 0 628 0 628 0 628 0 628 #> 10200 TCGA-AJ-A3NE-11 0 628 0 628 0 628 0 628 #> 10201 TCGA-AJ-A3NF-01 0 645 0 645 0 645 0 645 #> 10202 TCGA-AJ-A3NG-01 0 475 0 475 0 475 0 475 #> 10203 TCGA-AJ-A3NH-01 1 310 0 310 0 310 0 310 #> 10204 TCGA-AJ-A3NH-11 1 310 0 310 0 310 0 310 #> 10205 TCGA-AJ-A3OJ-01 0 467 0 467 0 467 0 467 #> 10206 TCGA-AJ-A3OK-01 0 485 0 485 0 485 0 485 #> 10207 TCGA-AJ-A3OL-01 1 449 1 449 1 424 1 424 #> 10208 TCGA-AJ-A3QS-01 0 513 0 513 0 513 0 513 #> 10209 TCGA-AJ-A3TW-01 0 513 0 513 0 513 0 513 #> 10210 TCGA-AJ-A5DV-01 0 679 0 679 0 679 0 679 #> 10211 TCGA-AJ-A5DW-01 0 390 0 390 0 390 0 390 #> 10212 TCGA-AJ-A6NU-01 0 632 0 632 0 632 0 632 #> 10213 TCGA-AJ-A8CT-01 0 82 0 82 0 82 0 82 #> 10214 TCGA-AJ-A8CV-01 0 1068 0 1068 0 1068 0 1068 #> 10215 TCGA-AJ-A8CW-01 0 4 0 4 NA NA 0 4 #> 10216 TCGA-AP-A3K1-01 1 666 1 666 NA NA 1 198 #> 10217 TCGA-AP-A5FX-01 1 1099 1 1099 1 407 1 407 #> 10218 TCGA-AX-A05W-01 0 2450 0 2450 0 2450 0 2450 #> 10219 TCGA-AX-A05Y-11 0 2684 0 2684 1 194 1 194 #> 10220 TCGA-AX-A0IZ-11 0 1333 0 1333 0 1333 0 1333 #> 10221 TCGA-AX-A0J0-11 0 1220 0 1220 0 1220 0 1220 #> 10222 TCGA-AX-A1C7-01 0 1054 0 1054 NA NA 1 390 #> 10223 TCGA-AX-A2H4-01 1 916 1 916 1 520 1 520 #> 10224 TCGA-AX-A2HC-11 0 1044 0 1044 1 756 1 756 #> 10225 TCGA-AX-A2HD-11 0 1414 0 1414 NA NA 0 1414 #> 10226 TCGA-AX-A2HH-01 0 540 0 540 NA NA 0 540 #> 10227 TCGA-AX-A2IN-01 1 947 1 947 NA NA 1 257 #> 10228 TCGA-AX-A3FS-01 0 7 0 7 NA NA 0 7 #> 10229 TCGA-AX-A3FT-01 0 6 0 6 NA NA 0 6 #> 10230 TCGA-AX-A3FV-01 0 0 0 0 NA NA 0 0 #> 10231 TCGA-AX-A3FW-01 0 17 0 17 NA NA 0 17 #> 10232 TCGA-AX-A3FX-01 1 1333 NA 1333 NA NA 1 938 #> 10233 TCGA-AX-A3FZ-01 0 6 0 6 NA NA 0 6 #> 10234 TCGA-AX-A3G1-01 1 624 NA 624 NA NA 0 624 #> 10235 TCGA-AX-A3G3-01 0 42 0 42 NA NA 0 42 #> 10236 TCGA-AX-A3G4-01 0 9 0 9 NA NA 0 9 #> 10237 TCGA-AX-A3G6-01 0 8 0 8 NA NA 0 8 #> 10238 TCGA-AX-A3G7-01 0 9 0 9 NA NA 0 9 #> 10239 TCGA-AX-A3G8-01 0 36 0 36 NA NA 0 36 #> 10240 TCGA-AX-A3G9-01 0 558 0 558 NA NA 0 558 #> 10241 TCGA-AX-A3GB-01 0 440 0 440 NA NA 0 440 #> 10242 TCGA-AX-A3GI-01 0 12 0 12 NA NA 0 12 #> 10243 TCGA-B5-A0JN-01 0 2445 0 2445 NA NA 0 2445 #> 10244 TCGA-B5-A0JR-01 0 1731 0 1731 0 1731 0 1731 #> 10245 TCGA-B5-A0K9-01 1 409 0 409 0 409 0 409 #> 10246 TCGA-B5-A11R-01 0 2349 0 2349 0 2349 0 2349 #> 10247 TCGA-B5-A1MS-01 1 3112 1 3112 NA NA 1 2706 #> 10248 TCGA-B5-A1MW-01 0 447 0 447 1 311 1 311 #> 10249 TCGA-B5-A3F9-01 0 4155 0 4155 NA NA 0 4155 #> 10250 TCGA-B5-A3FA-01 0 2929 0 2929 NA NA 0 2929 #> 10251 TCGA-B5-A3FB-01 0 2844 0 2844 NA NA 0 2844 #> 10252 TCGA-B5-A3FC-01 0 2185 0 2185 NA NA 0 2185 #> 10253 TCGA-B5-A3FD-01 1 1197 0 1197 NA NA 1 562 #> 10254 TCGA-B5-A3FH-01 0 841 0 841 0 841 0 841 #> 10255 TCGA-B5-A3S1-01 0 902 0 902 0 902 0 902 #> 10256 TCGA-B5-A5OC-01 0 1249 0 1249 NA NA 0 1249 #> 10257 TCGA-B5-A5OD-01 0 1038 0 1038 NA NA 0 1038 #> 10258 TCGA-B5-A5OE-01 0 1063 0 1063 NA NA 0 1063 #> 10259 TCGA-BG-A0MK-01 1 1317 1 1317 NA NA 1 1317 #> 10260 TCGA-BG-A2AD-11 0 609 0 609 0 609 0 609 #> 10261 TCGA-BG-A3EW-01 0 344 0 344 0 344 0 344 #> 10262 TCGA-BG-A3EW-11 0 344 0 344 0 344 0 344 #> 10263 TCGA-BG-A3PP-01 0 681 0 681 NA NA 1 665 #> 10264 TCGA-BG-A3PP-11 0 681 0 681 NA NA 1 665 #> 10265 TCGA-BK-A0CA-01 0 1064 0 1064 0 1064 0 1064 #> 10266 TCGA-BK-A0CC-01 0 1067 0 1067 1 1010 1 1010 #> 10267 TCGA-BK-A139-02 1 943 1 943 NA NA 1 684 #> 10268 TCGA-BK-A139-01 1 943 1 943 NA NA 1 684 #> 10269 TCGA-BK-A13B-01 0 966 0 966 1 760 1 760 #> 10270 TCGA-BK-A26L-01 0 734 0 734 0 734 0 734 #> 10271 TCGA-BK-A4ZD-01 0 506 0 506 0 506 0 506 #> 10272 TCGA-BK-A4ZD-11 0 506 0 506 0 506 0 506 #> 10273 TCGA-BK-A56F-01 0 401 0 401 0 401 0 401 #> 10274 TCGA-BK-A6W3-01 0 305 0 305 0 305 0 305 #> 10275 TCGA-BK-A6W4-01 0 300 0 300 0 300 0 300 #> 10276 TCGA-BS-A0V4-01 0 1810 0 1810 0 1810 0 1810 #> 10277 TCGA-BS-A0V7-01 0 1934 0 1934 0 1934 0 1934 #> 10278 TCGA-D1-A2G0-01 0 1484 0 1484 NA NA 0 1484 #> 10279 TCGA-D1-A3DA-01 0 483 0 483 0 483 0 483 #> 10280 TCGA-D1-A3DG-01 1 130 0 130 NA NA 0 130 #> 10281 TCGA-D1-A3DH-01 0 573 0 573 0 573 0 573 #> 10282 TCGA-D1-A3JP-01 0 515 0 515 NA NA 0 515 #> 10283 TCGA-D1-A3JQ-01 0 526 0 526 0 526 0 526 #> 10284 TCGA-DF-A2KN-01 0 67 0 67 0 67 0 67 #> 10285 TCGA-DF-A2KR-01 0 2178 0 2178 0 2178 1 2113 #> 10286 TCGA-DF-A2KU-01 0 3067 0 3067 0 3067 0 3067 #> 10287 TCGA-DF-A2KV-01 0 2717 0 2717 NA NA 0 2717 #> 10288 TCGA-DF-A2KY-01 0 332 0 332 NA NA 0 332 #> 10289 TCGA-DF-A2KZ-01 0 826 0 826 NA NA 0 826 #> 10290 TCGA-DF-A2L0-01 1 788 1 788 1 523 1 523 #> 10291 TCGA-DI-A1BU-01 0 1195 0 1195 0 1195 0 1195 #> 10292 TCGA-DI-A1C3-01 0 739 0 739 0 739 0 739 #> 10293 TCGA-DI-A2QT-01 1 377 1 377 NA NA 1 377 #> 10294 TCGA-DI-A2QY-01 1 3349 0 3349 0 3349 0 3349 #> 10295 TCGA-DI-A2QY-11 1 3349 0 3349 0 3349 0 3349 #> 10296 TCGA-E6-A2P8-01 1 72 1 72 NA NA 1 60 #> 10297 TCGA-E6-A2P9-01 0 1386 0 1386 0 1386 0 1386 #> 10298 TCGA-E6-A8L9-01 0 1013 0 1013 0 1013 0 1013 #> 10299 TCGA-EO-A1Y7-01 0 1495 0 1495 NA NA 1 880 #> 10300 TCGA-EO-A22U-01 0 1407 0 1407 0 1407 0 1407 #> 10301 TCGA-EO-A22X-01 0 1752 0 1752 0 1752 0 1752 #> 10302 TCGA-EO-A22Y-01 0 1567 0 1567 0 1567 0 1567 #> 10303 TCGA-EO-A3AS-01 0 1046 0 1046 0 1046 0 1046 #> 10304 TCGA-EO-A3AU-01 0 1543 0 1543 0 1543 1 1178 #> 10305 TCGA-EO-A3AV-01 0 1069 0 1069 0 1069 0 1069 #> 10306 TCGA-EO-A3AY-01 0 1158 0 1158 1 1163 1 1163 #> 10307 TCGA-EO-A3AZ-01 0 826 0 826 0 826 0 826 #> 10308 TCGA-EO-A3B0-01 0 1412 0 1412 NA NA 0 1412 #> 10309 TCGA-EO-A3B1-01 0 820 0 820 0 820 0 820 #> 10310 TCGA-EO-A3KU-01 0 677 0 677 0 677 0 677 #> 10311 TCGA-EO-A3KW-01 0 497 0 497 0 497 0 497 #> 10312 TCGA-EO-A3KX-01 0 1170 0 1170 0 1170 0 1170 #> 10313 TCGA-EO-A3L0-01 0 1554 0 1554 0 1554 0 1554 #> 10314 TCGA-EY-A1GL-01 0 1014 0 1014 0 1014 0 1014 #> 10315 TCGA-EY-A1GO-01 0 586 0 586 1 517 1 517 #> 10316 TCGA-EY-A1GP-01 0 573 0 573 0 573 0 573 #> 10317 TCGA-EY-A1GX-01 1 1127 0 1127 1 743 1 743 #> 10318 TCGA-EY-A210-01 0 383 0 383 0 383 0 383 #> 10319 TCGA-EY-A2ON-01 1 610 1 610 NA NA 1 226 #> 10320 TCGA-EY-A2OO-01 0 1392 0 1392 0 1392 0 1392 #> 10321 TCGA-EY-A2OP-01 0 944 0 944 0 944 0 944 #> 10322 TCGA-EY-A2OQ-01 0 885 0 885 0 885 0 885 #> 10323 TCGA-EY-A3L3-01 0 832 0 832 0 832 0 832 #> 10324 TCGA-EY-A3QX-01 1 989 1 989 NA NA 1 896 #> 10325 TCGA-EY-A4KR-01 1 346 1 346 NA NA 1 346 #> 10326 TCGA-EY-A547-01 0 545 0 545 0 545 0 545 #> 10327 TCGA-EY-A548-01 0 430 0 430 0 430 0 430 #> 10328 TCGA-EY-A549-01 0 605 0 605 0 605 0 605 #> 10329 TCGA-EY-A54A-01 0 447 0 447 0 447 0 447 #> 10330 TCGA-EY-A5W2-01 0 516 0 516 0 516 0 516 #> 10331 TCGA-EY-A72D-01 0 179 0 179 0 179 0 179 #> 10332 TCGA-FI-A2EY-01 1 880 0 880 0 880 1 577 #> 10333 TCGA-FI-A3PV-01 1 1249 1 1249 NA NA 1 1249 #> 10334 TCGA-FI-A3PX-01 0 2384 0 2384 0 2384 0 2384 #> 10335 TCGA-H5-A2HR-01 0 53 0 53 NA NA 0 53 #> 10336 TCGA-JU-AAVI-01 1 540 1 540 1 505 1 505 #> 10337 TCGA-K6-A3WQ-01 1 427 1 427 NA NA 1 351 #> 10338 TCGA-KJ-A3U4-01 0 1095 0 1095 NA NA 1 306 #> 10339 TCGA-KP-A3VZ-01 0 722 0 722 NA NA 0 722 #> 10340 TCGA-KP-A3W0-01 0 404 0 404 0 404 0 404 #> 10341 TCGA-KP-A3W1-01 0 288 0 288 0 288 0 288 #> 10342 TCGA-KP-A3W3-01 0 794 0 794 1 661 1 661 #> 10343 TCGA-KP-A3W4-01 1 554 1 554 NA NA 1 321 #> 10344 TCGA-PG-A5BC-01 0 707 0 707 0 707 0 707 #> 10345 TCGA-PG-A6IB-01 0 648 0 648 0 648 0 648 #> 10346 TCGA-PG-A7D5-01 0 1177 0 1177 NA NA 0 1177 #> 10347 TCGA-PG-A914-01 0 687 0 687 0 687 0 687 #> 10348 TCGA-PG-A915-01 0 249 0 249 0 249 0 249 #> 10349 TCGA-PG-A916-01 0 522 0 522 0 522 0 522 #> 10350 TCGA-PG-A917-01 0 212 0 212 0 212 0 212 #> 10351 TCGA-QF-A5YS-01 0 689 0 689 0 689 0 689 #> 10352 TCGA-QF-A5YT-01 0 1215 0 1215 0 1215 0 1215 #> 10353 TCGA-QS-A5YQ-01 0 759 0 759 0 759 0 759 #> 10354 TCGA-QS-A5YR-01 0 719 0 719 NA NA 0 719 #> 10355 TCGA-QS-A744-01 0 451 0 451 NA NA 0 451 #> 10356 TCGA-QS-A8F1-01 1 135 1 135 NA NA 1 135 #> 10357 TCGA-SJ-A6ZI-01 0 631 0 631 0 631 0 631 #> 10358 TCGA-SJ-A6ZJ-01 0 556 0 556 0 556 0 556 #> 10359 TCGA-SL-A6J9-01 0 2 0 2 NA NA 0 2 #> 10360 TCGA-SL-A6JA-01 0 7 0 7 0 7 0 7 #> 10361 TCGA-N5-A4R8-01 1 3115 NA 3115 0 3115 0 3115 #> 10362 TCGA-N5-A4RA-01 1 1591 NA 1591 NA NA 0 1591 #> 10363 TCGA-N5-A4RD-01 1 142 1 142 NA NA 1 75 #> 10364 TCGA-N5-A4RF-01 0 1806 0 1806 0 1806 0 1806 #> 10365 TCGA-N5-A4RJ-01 1 550 1 550 NA NA 1 287 #> 10366 TCGA-N5-A4RM-01 1 148 1 148 NA NA 1 144 #> 10367 TCGA-N5-A4RN-01 0 1053 0 1053 NA NA 1 570 #> 10368 TCGA-N5-A4RO-01 1 685 1 685 NA NA 1 407 #> 10369 TCGA-N5-A4RS-01 1 911 1 911 1 427 1 427 #> 10370 TCGA-N5-A4RT-01 0 2485 0 2485 0 2485 0 2485 #> 10371 TCGA-N5-A4RU-01 1 1526 1 1526 1 253 1 253 #> 10372 TCGA-N5-A4RV-01 0 2042 0 2042 0 2042 0 2042 #> 10373 TCGA-N5-A59E-01 1 447 1 447 NA NA 1 354 #> 10374 TCGA-N5-A59F-01 1 361 1 361 1 274 1 274 #> 10375 TCGA-N6-A4V9-01 0 979 0 979 0 979 0 979 #> 10376 TCGA-N6-A4VC-01 1 597 1 597 NA NA 1 171 #> 10377 TCGA-N6-A4VD-01 1 112 1 112 NA NA 1 49 #> 10378 TCGA-N6-A4VE-01 1 291 1 291 NA NA 1 275 #> 10379 TCGA-N6-A4VF-01 1 522 0 522 NA NA 0 522 #> 10380 TCGA-N6-A4VG-01 0 1574 0 1574 NA NA 1 493 #> 10381 TCGA-N7-A4Y0-01 1 771 1 771 NA NA 1 281 #> 10382 TCGA-N7-A4Y5-01 1 8 1 8 NA NA 1 8 #> 10383 TCGA-N7-A4Y8-01 1 378 1 378 NA NA 1 187 #> 10384 TCGA-N7-A59B-01 0 827 0 827 0 827 0 827 #> 10385 TCGA-N8-A4PI-01 1 810 1 810 NA NA 1 255 #> 10386 TCGA-N8-A4PL-01 1 418 1 418 NA NA 1 138 #> 10387 TCGA-N8-A4PM-01 0 829 0 829 1 524 1 524 #> 10388 TCGA-N8-A4PN-01 0 812 0 812 0 812 0 812 #> 10389 TCGA-N8-A4PO-01 0 781 0 781 NA NA 1 158 #> 10390 TCGA-N8-A4PP-01 1 611 1 611 NA NA 1 149 #> 10391 TCGA-N8-A4PQ-01 0 572 0 572 0 572 0 572 #> 10392 TCGA-N8-A56S-01 1 371 1 371 NA NA 1 199 #> 10393 TCGA-N9-A4PZ-01 1 667 1 667 1 487 1 487 #> 10394 TCGA-N9-A4Q1-01 1 2043 1 2043 1 1839 1 1839 #> 10395 TCGA-N9-A4Q3-01 0 1672 0 1672 1 735 1 735 #> 10396 TCGA-N9-A4Q4-01 0 1089 0 1089 0 1089 0 1089 #> 10397 TCGA-N9-A4Q7-01 0 604 0 604 0 604 0 604 #> 10398 TCGA-N9-A4Q8-01 1 481 1 481 1 215 1 215 #> 10399 TCGA-NA-A4QV-01 0 4269 0 4269 0 4269 0 4269 #> 10400 TCGA-NA-A4QW-01 0 2457 0 2457 0 2457 0 2457 #> 10401 TCGA-NA-A4QX-01 1 838 1 838 NA NA 1 566 #> 10402 TCGA-NA-A4QY-01 1 114 1 114 NA NA 1 114 #> 10403 TCGA-NA-A4R0-01 1 541 1 541 NA NA 1 541 #> 10404 TCGA-NA-A4R1-01 1 203 1 203 NA NA 1 203 #> 10405 TCGA-NA-A5I1-01 1 2680 1 2680 1 2553 1 2553 #> 10406 TCGA-ND-A4W6-01 1 317 1 317 NA NA 1 317 #> 10407 TCGA-ND-A4WA-01 1 714 0 714 0 714 0 714 #> 10408 TCGA-ND-A4WC-01 0 766 0 766 0 766 0 766 #> 10409 TCGA-ND-A4WF-01 1 167 1 167 NA NA 1 167 #> 10410 TCGA-NF-A4WU-01 0 298 0 298 0 298 0 298 #> 10411 TCGA-NF-A4WX-01 0 452 0 452 NA NA 0 452 #> 10412 TCGA-NF-A4X2-01 0 81 0 81 0 81 0 81 #> 10413 TCGA-NF-A5CP-01 1 167 1 167 NA NA 1 106 #> 10414 TCGA-NG-A4VU-01 1 442 1 442 NA NA 1 281 #> 10415 TCGA-NG-A4VW-01 1 949 1 949 1 937 1 937 #> 10416 TCGA-QM-A5NM-01 0 587 0 587 NA NA 1 153 #> 10417 TCGA-QN-A5NN-01 0 0 0 0 0 0 0 0 #> 10418 TCGA-RZ-AB0B-01 1 149 1 149 NA NA 0 149 #> 10419 TCGA-V3-A9ZX-01 0 470 0 470 NA NA 1 233 #> 10420 TCGA-V3-A9ZY-01 0 459 0 459 NA NA 0 459 #> 10421 TCGA-V4-A9E5-01 0 2499 0 2499 NA NA 0 2499 #> 10422 TCGA-V4-A9E8-01 1 808 1 808 NA NA 1 557 #> 10423 TCGA-V4-A9E9-01 0 1246 0 1246 NA NA 0 1246 #> 10424 TCGA-V4-A9EA-01 0 1348 0 1348 NA NA 0 1348 #> 10425 TCGA-V4-A9EC-01 0 743 0 743 NA NA 0 743 #> 10426 TCGA-V4-A9ED-01 0 1078 0 1078 NA NA 0 1078 #> 10427 TCGA-V4-A9EE-01 1 398 1 398 NA NA 1 211 #> 10428 TCGA-V4-A9EF-01 0 1165 0 1165 NA NA 0 1165 #> 10429 TCGA-V4-A9EH-01 0 670 0 670 NA NA 0 670 #> 10430 TCGA-V4-A9EI-01 1 389 1 389 NA NA 1 203 #> 10431 TCGA-V4-A9EJ-01 0 746 0 746 NA NA 0 746 #> 10432 TCGA-V4-A9EK-01 0 1028 0 1028 NA NA 0 1028 #> 10433 TCGA-V4-A9EL-01 0 982 0 982 NA NA 1 413 #> 10434 TCGA-V4-A9EM-01 0 966 0 966 NA NA 0 966 #> 10435 TCGA-V4-A9EO-01 0 773 0 773 NA NA 0 773 #> 10436 TCGA-V4-A9EQ-01 1 455 1 455 NA NA 1 252 #> 10437 TCGA-V4-A9ES-01 0 1511 0 1511 NA NA 1 1299 #> 10438 TCGA-V4-A9ET-01 0 1362 0 1362 NA NA 0 1362 #> 10439 TCGA-V4-A9EU-01 0 709 0 709 NA NA 1 86 #> 10440 TCGA-V4-A9EV-01 1 1269 1 1269 NA NA 1 1269 #> 10441 TCGA-V4-A9EW-01 0 1211 0 1211 NA NA 1 197 #> 10442 TCGA-V4-A9EX-01 1 730 1 730 NA NA 1 381 #> 10443 TCGA-V4-A9EY-01 0 837 0 837 NA NA 0 837 #> 10444 TCGA-V4-A9EZ-01 0 599 0 599 NA NA 0 599 #> 10445 TCGA-V4-A9F0-01 1 945 1 945 NA NA 1 489 #> 10446 TCGA-V4-A9F1-01 0 938 0 938 NA NA 0 938 #> 10447 TCGA-V4-A9F2-01 0 734 0 734 NA NA 0 734 #> 10448 TCGA-V4-A9F3-01 1 873 1 873 NA NA 1 329 #> 10449 TCGA-V4-A9F4-01 0 634 0 634 NA NA 0 634 #> 10450 TCGA-V4-A9F5-01 0 203 0 203 NA NA 1 78 #> 10451 TCGA-V4-A9F7-01 0 1256 0 1256 NA NA 0 1256 #> 10452 TCGA-V4-A9F8-01 0 597 0 597 NA NA 0 597 #> 10453 TCGA-VD-A8K7-01 0 1459 0 1459 NA NA 0 1459 #> 10454 TCGA-VD-A8K8-01 1 1377 1 1377 NA NA 1 1377 #> 10455 TCGA-VD-A8K9-01 0 1424 0 1424 NA NA 0 1424 #> 10456 TCGA-VD-A8KA-01 0 1178 0 1178 NA NA 1 1008 #> 10457 TCGA-VD-A8KB-01 0 1354 0 1354 NA NA 1 1032 #> 10458 TCGA-VD-A8KD-01 1 114 1 114 NA NA 1 NA #> 10459 TCGA-VD-A8KE-01 0 821 0 821 NA NA 0 821 #> 10460 TCGA-VD-A8KF-01 1 40 1 40 NA NA 1 40 #> 10461 TCGA-VD-A8KG-01 0 19 0 19 NA NA 0 19 #> 10462 TCGA-VD-A8KH-01 0 1158 0 1158 NA NA 0 1158 #> 10463 TCGA-VD-A8KI-01 1 1113 1 1113 NA NA 1 1113 #> 10464 TCGA-VD-A8KJ-01 0 1150 0 1150 NA NA 0 1150 #> 10465 TCGA-VD-A8KK-01 0 64 0 64 NA NA 0 64 #> 10466 TCGA-VD-A8KL-01 0 638 0 638 NA NA 0 638 #> 10467 TCGA-VD-A8KM-01 0 4 0 4 NA NA 0 4 #> 10468 TCGA-VD-A8KN-01 0 68 0 68 NA NA 0 68 #> 10469 TCGA-VD-A8KO-01 0 795 0 795 NA NA 0 795 #> 10470 TCGA-VD-AA8M-01 0 6 0 6 NA NA 0 6 #> 10471 TCGA-VD-AA8N-01 0 44 0 44 NA NA 0 44 #> 10472 TCGA-VD-AA8O-01 1 606 1 606 NA NA 1 606 #> 10473 TCGA-VD-AA8P-01 0 86 0 86 NA NA 0 86 #> 10474 TCGA-VD-AA8Q-01 1 636 1 636 NA NA 0 636 #> 10475 TCGA-VD-AA8R-01 0 6 0 6 NA NA 0 6 #> 10476 TCGA-VD-AA8S-01 0 427 0 427 NA NA 0 427 #> 10477 TCGA-VD-AA8T-01 0 49 0 49 NA NA 0 49 #> 10478 TCGA-WC-A87T-01 0 2600 0 2600 NA NA 1 2020 #> 10479 TCGA-WC-A87U-01 1 1581 0 1581 NA NA 1 1581 #> 10480 TCGA-WC-A87W-01 0 1703 0 1703 NA NA 1 606 #> 10481 TCGA-WC-A87Y-01 1 1314 1 1314 NA NA 0 1314 #> 10482 TCGA-WC-A880-01 0 1258 0 1258 NA NA 0 1258 #> 10483 TCGA-WC-A881-01 0 1065 0 1065 NA NA 0 1065 #> 10484 TCGA-WC-A882-01 0 1112 0 1112 NA NA 0 1112 #> 10485 TCGA-WC-A883-01 1 241 1 241 NA NA 1 241 #> 10486 TCGA-WC-A884-01 0 12 0 12 NA NA 0 12 #> 10487 TCGA-WC-A885-01 0 686 0 686 NA NA 0 686 #> 10488 TCGA-WC-A888-01 1 575 0 575 NA NA 0 575 #> 10489 TCGA-WC-A88A-01 1 82 1 82 NA NA 1 82 #> 10490 TCGA-WC-AA9A-01 1 453 1 453 NA NA 1 371 #> 10491 TCGA-WC-AA9E-01 0 838 0 838 NA NA 0 838 #> 10492 TCGA-YZ-A980-01 0 1862 0 1862 NA NA 1 1556 #> 10493 TCGA-YZ-A982-01 0 495 0 495 NA NA 0 495 #> 10494 TCGA-YZ-A983-01 0 798 0 798 NA NA 0 798 #> 10495 TCGA-YZ-A984-01 1 1396 1 1396 NA NA 1 154 #> 10496 TCGA-YZ-A985-01 0 1184 0 1184 NA NA 0 1184 # \\donttest{ data2 <- load_data(\"tcga_armcalls\") #> Loading data from remote: https://zenodo.org/record/12819839/files/tcga_armcalls.rda, please wait... #> Data has been saved to /home/runner/work/_temp/Library/UCSCXenaShiny/extdata/tcga_armcalls.rda data2 #> Sample Type Aneuploidy Score 1p 1q 2p 2q 3p 3q 4p 4q 5p 5q 6p 6q #> 1 TCGA-18-3406-01 LUSC 8 -1 0 0 0 -1 NA 0 NA 0 0 NA NA #> 2 TCGA-18-3407-01 LUSC 25 0 NA 1 1 -1 1 -1 NA 0 0 NA 0 #> 3 TCGA-18-3408-01 LUSC 5 -1 1 0 0 -1 NA 0 0 0 -1 0 0 #> 4 TCGA-18-3410-01 LUSC 20 0 0 0 0 -1 1 1 1 1 -1 0 0 #> 5 TCGA-18-3411-01 LUSC 19 NA 1 1 1 -1 NA -1 NA 1 NA NA -1 #> 6 TCGA-18-3412-01 LUSC 17 -1 0 NA 0 -1 NA -1 -1 1 -1 NA NA #> 7 TCGA-18-3414-01 LUSC 11 0 1 NA 0 NA 1 0 0 1 -1 0 0 #> 8 TCGA-18-3415-01 LUSC 17 -1 1 1 NA -1 NA -1 -1 1 -1 0 -1 #> 9 TCGA-18-3416-01 LUSC 19 0 NA NA NA -1 NA -1 1 0 -1 -1 NA #> 10 TCGA-18-3417-01 LUSC 29 -1 1 1 NA -1 1 -1 -1 1 -1 -1 -1 #> 11 TCGA-18-3419-01 LUSC 11 0 0 1 0 NA 1 0 0 0 0 NA NA #> 12 TCGA-18-3421-01 LUSC 13 0 0 0 NA NA 1 NA NA 1 NA NA NA #> 13 TCGA-18-4083-01 LUSC 14 NA NA 0 NA -1 NA NA -1 1 -1 -1 -1 #> 14 TCGA-18-4086-01 LUSC 4 0 0 0 NA -1 1 0 NA NA -1 NA 0 #> 15 TCGA-18-4721-01 LUSC 9 -1 NA 0 0 -1 0 0 NA 0 -1 -1 0 #> 16 TCGA-18-5592-01 LUSC 12 -1 1 0 0 -1 0 -1 -1 1 -1 0 NA #> 17 TCGA-21-1071-01 LUSC 25 -1 1 1 1 NA 1 -1 -1 1 1 0 0 #> 18 TCGA-21-1072-01 LUSC 19 0 1 1 1 0 NA 0 -1 NA 0 1 -1 #> 19 TCGA-21-1075-01 LUSC 19 -1 1 0 NA -1 NA 0 -1 1 -1 0 0 #> 20 TCGA-21-1076-01 LUSC 32 -1 -1 1 1 -1 1 -1 -1 0 NA NA 1 #> 21 TCGA-21-1079-01 LUSC 19 0 0 1 0 -1 NA -1 0 1 -1 1 0 #> 22 TCGA-21-1080-01 LUSC 13 0 0 0 0 -1 1 -1 -1 1 NA 0 0 #> 23 TCGA-21-1081-01 LUSC 31 NA 1 0 0 -1 1 -1 -1 1 -1 NA -1 #> 24 TCGA-21-1082-01 LUSC 10 0 NA NA -1 NA 1 NA -1 NA -1 0 0 #> 25 TCGA-21-5782-01 LUSC 9 NA 0 0 NA -1 1 -1 NA 1 -1 0 NA #> 26 TCGA-21-5783-01 LUSC 17 0 0 NA 0 -1 1 0 0 1 0 NA 0 #> 27 TCGA-21-5784-01 LUSC 12 0 1 0 0 0 1 0 0 1 -1 0 0 #> 28 TCGA-21-5786-01 LUSC 24 -1 0 1 -1 -1 1 -1 -1 1 -1 0 NA #> 29 TCGA-21-5787-01 LUSC 23 NA NA 0 -1 -1 0 -1 -1 1 NA 1 -1 #> 30 TCGA-22-0940-01 LUSC 11 -1 0 0 NA -1 1 -1 0 1 0 -1 0 #> 31 TCGA-22-0944-01 LUSC 10 -1 0 1 NA -1 NA NA NA 1 -1 0 0 #> 32 TCGA-22-1000-01 LUSC 11 0 0 0 0 -1 1 -1 -1 0 0 0 0 #> 33 TCGA-22-1002-01 LUSC 9 0 -1 0 0 -1 1 0 0 1 -1 0 0 #> 34 TCGA-22-1005-01 LUSC 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 35 TCGA-22-1011-01 LUSC 18 0 0 0 NA 0 0 -1 -1 1 -1 -1 -1 #> 36 TCGA-22-1012-01 LUSC 22 NA 1 NA NA -1 1 -1 NA 1 -1 NA 1 #> 37 TCGA-22-1016-01 LUSC 22 NA 1 NA -1 -1 NA 0 0 0 -1 0 NA #> 38 TCGA-22-1017-01 LUSC 10 -1 NA 0 NA NA 0 1 0 NA 0 0 0 #> 39 TCGA-22-4591-01 LUSC 19 0 0 1 0 -1 1 1 0 1 -1 NA 0 #> 40 TCGA-22-4593-01 LUSC 17 -1 NA -1 -1 -1 NA -1 NA 1 -1 -1 NA #> 41 TCGA-22-4594-01 LUSC 23 NA 1 NA NA -1 0 -1 -1 1 NA 1 0 #> 42 TCGA-22-4595-01 LUSC 11 NA NA NA NA -1 1 -1 NA NA NA NA -1 #> 43 TCGA-22-4596-01 LUSC 6 0 1 0 0 NA 0 0 0 0 0 0 0 #> 44 TCGA-22-4599-01 LUSC 28 -1 1 1 0 -1 1 -1 -1 1 -1 -1 -1 #> 45 TCGA-22-4601-01 LUSC 8 NA NA NA NA -1 1 0 0 NA -1 1 NA #> 46 TCGA-22-4604-01 LUSC 21 NA 0 1 -1 -1 NA -1 NA NA -1 NA 0 #> 47 TCGA-22-4605-01 LUSC 22 1 1 1 NA -1 1 -1 -1 1 -1 1 1 #> 48 TCGA-22-4607-01 LUSC 12 0 1 0 0 -1 1 -1 -1 0 -1 1 -1 #> 49 TCGA-22-4609-01 LUSC 14 -1 0 0 0 -1 1 -1 0 1 -1 -1 0 #> 50 TCGA-22-4613-01 LUSC 12 0 0 NA NA -1 1 0 NA 1 -1 0 0 #> 51 TCGA-22-5471-01 LUSC 19 -1 1 1 -1 -1 NA -1 NA 0 -1 0 NA #> 52 TCGA-22-5472-01 LUSC 9 0 0 0 0 -1 1 -1 -1 0 -1 0 0 #> 53 TCGA-22-5473-01 LUSC 19 -1 0 1 0 -1 NA -1 -1 1 -1 -1 0 #> 54 TCGA-22-5474-01 LUSC 9 -1 1 0 NA NA NA -1 -1 1 -1 0 0 #> 55 TCGA-22-5477-01 LUSC 16 -1 NA 0 NA -1 NA -1 0 1 -1 -1 0 #> 56 TCGA-22-5478-01 LUSC 24 0 0 1 0 -1 0 1 0 1 -1 -1 -1 #> 57 TCGA-22-5479-01 LUSC 32 -1 1 1 1 -1 1 -1 -1 NA -1 -1 -1 #> 58 TCGA-22-5480-01 LUSC 9 0 1 1 NA -1 0 0 0 0 0 0 0 #> 59 TCGA-22-5481-01 LUSC 15 NA 1 NA 0 -1 0 0 NA 1 NA NA NA #> 60 TCGA-22-5482-01 LUSC 14 0 0 0 0 -1 1 0 NA 1 -1 NA 1 #> 61 TCGA-22-5483-01 LUSC 26 -1 1 1 1 -1 1 -1 -1 1 -1 NA 1 #> 62 TCGA-22-5485-01 LUSC 13 0 1 0 0 -1 NA -1 -1 1 -1 0 0 #> 63 TCGA-22-5489-01 LUSC 11 0 1 NA 1 NA 1 -1 -1 0 0 0 0 #> 64 TCGA-22-5491-01 LUSC 16 NA 0 0 NA -1 1 -1 -1 0 -1 -1 0 #> 65 TCGA-22-5492-01 LUSC 9 0 0 NA 0 -1 1 0 0 1 NA NA -1 #> 66 TCGA-22-A5C4-01 LUSC 17 NA 0 NA -1 -1 NA NA NA 1 -1 NA -1 #> 67 TCGA-33-4532-01 LUSC 24 -1 -1 1 NA -1 1 -1 -1 NA -1 -1 -1 #> 68 TCGA-33-4533-01 LUSC 10 NA 1 NA NA NA NA -1 -1 NA -1 0 0 #> 69 TCGA-33-4538-01 LUSC 20 -1 1 0 NA -1 NA -1 -1 1 -1 0 0 #> 70 TCGA-33-4547-01 LUSC 13 0 0 0 0 NA 1 -1 0 1 -1 -1 1 #> 71 TCGA-33-4566-01 LUSC 19 -1 1 0 0 -1 0 -1 -1 1 -1 NA -1 #> 72 TCGA-33-4582-01 LUSC 15 NA 0 NA NA -1 NA -1 -1 0 -1 NA NA #> 73 TCGA-33-4583-01 LUSC 26 -1 1 0 1 -1 1 -1 -1 1 1 0 0 #> 74 TCGA-33-4586-01 LUSC 24 -1 1 0 0 -1 1 -1 -1 NA -1 0 0 #> 75 TCGA-33-4587-01 LUSC 18 NA 1 0 0 -1 NA -1 -1 1 -1 1 1 #> 76 TCGA-33-4589-01 LUSC 26 -1 -1 NA -1 -1 1 -1 -1 -1 -1 -1 NA #> 77 TCGA-33-6738-01 LUSC 18 0 0 1 0 -1 0 0 0 1 -1 0 NA #> 78 TCGA-33-A4WN-01 LUSC 6 NA 1 NA 0 -1 1 NA NA NA 0 0 0 #> 79 TCGA-33-A5GW-01 LUSC 10 -1 0 0 0 -1 1 0 NA 0 NA 0 0 #> 80 TCGA-33-AAS8-01 LUSC 10 -1 0 0 0 -1 NA 0 0 0 -1 NA 0 #> 81 TCGA-33-AASB-01 LUSC 16 -1 NA 0 0 -1 1 -1 NA 1 -1 NA NA #> 82 TCGA-33-AASD-01 LUSC 26 0 1 1 1 -1 1 -1 1 0 -1 -1 0 #> 83 TCGA-33-AASI-01 LUSC 12 -1 0 0 0 NA NA NA 0 0 -1 1 -1 #> 84 TCGA-33-AASJ-01 LUSC 19 0 0 1 NA -1 NA -1 -1 1 -1 0 0 #> 85 TCGA-33-AASL-01 LUSC 13 -1 NA 0 0 NA 1 -1 NA 0 NA NA NA #> 86 TCGA-34-2596-01 LUSC 16 -1 0 NA NA -1 1 NA -1 0 -1 -1 -1 #> 87 TCGA-34-2600-01 LUSC 19 -1 1 0 0 -1 1 -1 -1 1 -1 0 0 #> 88 TCGA-34-2604-01 LUSC 24 0 0 1 -1 -1 1 -1 -1 1 -1 -1 -1 #> 89 TCGA-34-2605-01 LUSC 23 -1 0 NA NA -1 1 -1 -1 1 -1 NA NA #> 90 TCGA-34-2608-01 LUSC 8 0 0 0 0 -1 1 0 0 1 -1 0 0 #> 91 TCGA-34-2609-01 LUSC 18 -1 -1 NA -1 NA NA NA NA 1 -1 0 NA #> 92 TCGA-34-5231-01 LUSC 27 -1 1 1 NA -1 NA -1 0 -1 -1 0 -1 #> 93 TCGA-34-5232-01 LUSC 8 0 0 0 0 -1 1 -1 NA 0 0 NA 0 #> 94 TCGA-34-5234-01 LUSC 3 0 0 0 0 0 0 0 0 0 NA -1 -1 #> 95 TCGA-34-5236-01 LUSC 17 0 NA 1 NA -1 1 -1 NA 1 -1 0 0 #> 96 TCGA-34-5239-01 LUSC 21 0 1 0 0 -1 0 0 0 1 -1 0 0 #> 97 TCGA-34-5240-01 LUSC 28 0 0 0 NA -1 1 NA -1 1 -1 -1 -1 #> 98 TCGA-34-5241-01 LUSC 13 0 0 0 0 -1 1 0 -1 1 -1 0 0 #> 99 TCGA-34-5927-01 LUSC 9 0 0 0 0 -1 1 -1 -1 0 -1 0 0 #> 100 TCGA-34-5928-01 LUSC 27 -1 NA NA -1 -1 1 -1 -1 1 -1 1 -1 #> 101 TCGA-34-5929-01 LUSC 11 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 102 TCGA-34-7107-01 LUSC 22 -1 1 NA NA -1 1 -1 -1 1 -1 NA NA #> 103 TCGA-34-8454-01 LUSC 7 0 0 NA 0 -1 NA 0 0 0 -1 0 0 #> 104 TCGA-34-8455-01 LUSC 24 1 1 1 1 -1 1 0 0 1 -1 0 0 #> 105 TCGA-34-8456-01 LUSC 23 -1 0 1 0 -1 NA -1 1 1 -1 NA NA #> 106 TCGA-34-A5IX-01 LUSC 27 1 1 NA 1 -1 1 0 NA 1 -1 -1 0 #> 107 TCGA-37-3783-01 LUSC 10 0 1 NA 0 -1 1 -1 0 1 0 0 NA #> 108 TCGA-37-3789-01 LUSC 9 0 0 0 0 -1 1 -1 0 NA 0 0 0 #> 109 TCGA-37-3792-01 LUSC 23 NA 0 0 0 -1 NA -1 -1 NA NA -1 -1 #> 110 TCGA-37-4129-01 LUSC 4 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 111 TCGA-37-4130-01 LUSC 23 NA -1 NA NA -1 1 1 NA 1 -1 NA NA #> 112 TCGA-37-4132-01 LUSC 7 0 0 0 0 -1 NA 0 0 0 -1 0 0 #> 113 TCGA-37-4133-01 LUSC 17 0 1 1 0 -1 1 -1 -1 1 -1 1 NA #> 114 TCGA-37-4135-01 LUSC 25 0 1 0 0 -1 1 -1 -1 1 -1 0 1 #> 115 TCGA-37-4141-01 LUSC 14 0 0 0 -1 -1 1 -1 -1 1 NA 0 0 #> 116 TCGA-37-5819-01 LUSC 20 -1 NA NA 0 NA 1 -1 -1 NA NA -1 NA #> 117 TCGA-37-A5EL-01 LUSC 21 -1 NA NA NA -1 1 -1 -1 NA -1 NA -1 #> 118 TCGA-37-A5EN-01 LUSC 18 -1 1 1 0 -1 NA -1 -1 -1 -1 NA 0 #> 119 TCGA-39-5011-01 LUSC 17 -1 -1 0 0 -1 NA 0 NA NA -1 0 0 #> 120 TCGA-39-5016-01 LUSC 23 -1 1 1 NA -1 NA -1 0 1 -1 -1 -1 #> 121 TCGA-39-5019-01 LUSC 9 0 0 0 0 0 1 0 0 0 0 0 0 #> 122 TCGA-39-5021-01 LUSC 12 0 NA 0 0 -1 NA 0 -1 1 -1 0 -1 #> 123 TCGA-39-5022-01 LUSC 7 0 0 NA 0 -1 1 0 0 1 0 0 -1 #> 124 TCGA-39-5024-01 LUSC 4 0 0 0 0 -1 1 0 0 1 0 0 0 #> 125 TCGA-39-5027-01 LUSC 15 -1 0 0 0 -1 1 -1 -1 0 -1 -1 -1 #> 126 TCGA-39-5028-01 LUSC 29 NA -1 -1 -1 -1 1 1 1 1 1 NA NA #> 127 TCGA-39-5029-01 LUSC 16 NA -1 NA 0 NA 1 0 0 1 -1 NA 0 #> 128 TCGA-39-5030-01 LUSC 12 0 0 0 0 -1 1 0 0 1 -1 0 0 #> 129 TCGA-39-5031-01 LUSC 19 NA 0 NA 0 NA 1 -1 NA 1 -1 -1 -1 #> 130 TCGA-39-5034-01 LUSC 14 NA NA NA 0 -1 0 0 -1 NA 0 0 -1 #> 131 TCGA-39-5035-01 LUSC 17 NA 1 1 1 -1 1 -1 -1 1 0 NA 0 #> 132 TCGA-39-5036-01 LUSC 18 0 0 0 NA -1 1 -1 -1 0 -1 -1 NA #> 133 TCGA-39-5037-01 LUSC 22 -1 1 1 NA -1 NA -1 -1 NA -1 NA -1 #> 134 TCGA-39-5039-01 LUSC 11 0 0 0 0 -1 NA 0 0 1 -1 -1 -1 #> 135 TCGA-39-5040-01 LUSC 15 NA NA 1 1 0 1 -1 -1 0 0 0 0 #> 136 TCGA-43-2576-01 LUSC 29 NA NA 1 1 -1 1 1 NA 1 -1 1 1 #> 137 TCGA-43-2578-01 LUSC 9 NA 0 NA 0 NA 1 -1 -1 NA -1 NA NA #> 138 TCGA-43-2581-01 LUSC 19 -1 1 1 1 -1 0 0 0 1 -1 0 -1 #> 139 TCGA-43-3394-01 LUSC 25 -1 0 1 NA -1 1 -1 -1 1 -1 1 0 #> 140 TCGA-43-3920-01 LUSC 20 NA 1 0 NA -1 1 1 -1 1 -1 0 1 #> 141 TCGA-43-5668-01 LUSC 18 0 0 1 1 0 0 0 0 1 -1 0 NA #> 142 TCGA-43-5670-01 LUSC 20 -1 -1 NA 0 NA 0 -1 -1 1 NA NA -1 #> 143 TCGA-43-6143-01 LUSC 18 NA 1 1 NA -1 1 NA 0 1 NA NA -1 #> 144 TCGA-43-6647-01 LUSC 9 0 0 0 0 -1 NA 0 NA 1 -1 0 -1 #> 145 TCGA-43-6770-01 LUSC 8 NA 0 0 0 -1 NA NA 0 NA -1 0 NA #> 146 TCGA-43-6771-01 LUSC 6 0 0 0 0 0 0 -1 -1 0 0 0 0 #> 147 TCGA-43-6773-01 LUSC 4 NA NA 0 NA 0 0 0 0 0 0 0 0 #> 148 TCGA-43-7656-01 LUSC 13 0 0 0 0 -1 NA -1 NA 1 -1 0 0 #> 149 TCGA-43-7657-01 LUSC 22 -1 0 0 -1 -1 1 -1 -1 1 NA 0 0 #> 150 TCGA-43-7658-01 LUSC 18 NA NA NA 0 -1 1 0 -1 1 -1 NA 0 #> 151 TCGA-43-8115-01 LUSC 10 NA NA 1 0 -1 NA -1 -1 0 0 NA -1 #> 152 TCGA-43-8116-01 LUSC 12 0 0 0 NA -1 NA 1 NA 1 -1 0 0 #> 153 TCGA-43-8118-01 LUSC 14 NA 0 NA NA -1 1 -1 NA 1 -1 -1 NA #> 154 TCGA-43-A474-01 LUSC 19 -1 1 0 NA -1 NA -1 -1 1 -1 -1 0 #> 155 TCGA-43-A475-01 LUSC 14 NA 1 0 0 0 NA 0 0 NA 0 NA 0 #> 156 TCGA-43-A56U-01 LUSC 5 0 0 0 0 NA NA 0 NA NA 0 0 0 #> 157 TCGA-43-A56V-01 LUSC 17 -1 0 0 0 -1 1 -1 -1 1 -1 -1 0 #> 158 TCGA-46-3765-01 LUSC 15 NA 0 1 NA NA 1 -1 -1 1 -1 0 -1 #> 159 TCGA-46-3766-01 LUSC 11 0 0 0 0 -1 1 0 0 NA -1 0 0 #> 160 TCGA-46-3767-01 LUSC 10 0 0 NA 0 -1 1 NA 0 1 NA 1 1 #> 161 TCGA-46-3768-01 LUSC 27 -1 1 1 1 NA 1 0 -1 1 -1 NA 1 #> 162 TCGA-46-3769-01 LUSC 18 0 0 0 NA -1 0 0 -1 1 -1 NA NA #> 163 TCGA-46-6025-01 LUSC 19 NA 0 1 NA NA 1 -1 NA 1 -1 NA -1 #> 164 TCGA-46-6026-01 LUSC 26 -1 -1 0 0 -1 1 -1 -1 1 -1 1 1 #> 165 TCGA-51-4079-01 LUSC 8 NA NA 0 0 -1 NA 0 -1 NA -1 0 0 #> 166 TCGA-51-4080-01 LUSC 10 -1 1 1 NA -1 1 0 0 0 NA 0 0 #> 167 TCGA-51-4081-01 LUSC 17 -1 0 0 NA -1 1 -1 -1 1 -1 -1 -1 #> 168 TCGA-52-7622-01 LUSC 14 -1 1 0 0 -1 NA 0 NA 1 -1 0 0 #> 169 TCGA-52-7809-01 LUSC 17 -1 1 1 NA -1 1 -1 -1 1 -1 NA NA #> 170 TCGA-52-7810-01 LUSC 22 NA NA 0 NA NA NA -1 NA 1 -1 0 0 #> 171 TCGA-52-7811-01 LUSC 14 -1 NA 1 NA -1 NA -1 -1 1 -1 NA 1 #> 172 TCGA-52-7812-01 LUSC 7 NA NA 0 0 NA 0 -1 0 NA 0 0 -1 #> 173 TCGA-56-1622-01 LUSC 18 0 0 NA 0 -1 NA -1 NA NA -1 0 0 #> 174 TCGA-56-5897-01 LUSC 12 0 0 0 0 -1 1 0 0 0 -1 0 0 #> 175 TCGA-56-5898-01 LUSC 28 -1 1 1 1 -1 1 0 0 1 -1 1 1 #> 176 TCGA-56-6545-01 LUSC 20 -1 1 0 NA NA NA -1 NA 1 NA 1 -1 #> 177 TCGA-56-6546-01 LUSC 11 0 0 0 0 0 0 0 0 1 -1 0 0 #> 178 TCGA-56-7221-01 LUSC 14 -1 0 0 0 -1 0 -1 -1 1 -1 0 0 #> 179 TCGA-56-7222-01 LUSC 25 0 0 1 1 -1 0 -1 -1 1 -1 NA 0 #> 180 TCGA-56-7223-01 LUSC 20 -1 1 0 0 -1 1 -1 -1 0 NA 0 NA #> 181 TCGA-56-7579-01 LUSC 12 0 0 NA NA -1 NA -1 NA 0 NA NA 0 #> 182 TCGA-56-7580-01 LUSC 31 0 1 1 1 -1 1 1 1 1 -1 1 1 #> 183 TCGA-56-7582-01 LUSC 23 NA 1 1 NA -1 1 -1 -1 1 NA NA NA #> 184 TCGA-56-7730-01 LUSC 20 -1 NA 1 NA -1 1 -1 -1 NA -1 1 NA #> 185 TCGA-56-7731-01 LUSC 10 0 0 0 0 -1 1 0 0 1 -1 0 0 #> 186 TCGA-56-7822-01 LUSC 25 -1 -1 0 0 -1 1 0 0 1 -1 -1 1 #> 187 TCGA-56-7823-01 LUSC 8 -1 0 0 0 -1 NA -1 -1 0 -1 0 0 #> 188 TCGA-56-8082-01 LUSC 14 NA 0 0 0 -1 1 1 NA 0 -1 NA 1 #> 189 TCGA-56-8083-01 LUSC 8 0 0 0 0 -1 NA -1 NA 1 -1 0 0 #> 190 TCGA-56-8201-01 LUSC 22 0 0 1 NA -1 1 -1 -1 1 0 0 0 #> 191 TCGA-56-8304-01 LUSC 13 NA -1 0 NA -1 1 -1 -1 1 -1 0 0 #> 192 TCGA-56-8305-01 LUSC 18 -1 1 NA NA -1 1 0 NA 1 -1 0 0 #> 193 TCGA-56-8307-01 LUSC 26 1 1 0 0 -1 1 1 1 1 NA 1 1 #> 194 TCGA-56-8308-01 LUSC 17 NA 0 NA NA -1 1 -1 -1 0 -1 1 0 #> 195 TCGA-56-8309-01 LUSC 12 0 0 0 0 -1 1 0 0 1 -1 NA 0 #> 196 TCGA-56-8503-01 LUSC 17 0 0 0 0 -1 1 0 NA NA -1 0 0 #> 197 TCGA-56-8504-01 LUSC 27 -1 0 0 NA -1 1 -1 -1 0 -1 -1 -1 #> 198 TCGA-56-8622-01 LUSC 8 0 0 0 0 NA NA 0 0 1 -1 0 0 #> 199 TCGA-56-8623-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 200 TCGA-56-8624-01 LUSC 18 0 0 0 0 -1 1 0 0 1 1 -1 -1 #> 201 TCGA-56-8625-01 LUSC 6 NA 0 NA 0 NA 1 NA NA 1 -1 NA -1 #> 202 TCGA-56-8626-01 LUSC 14 0 0 0 0 -1 1 0 0 1 -1 NA 0 #> 203 TCGA-56-8628-01 LUSC 16 0 NA 1 0 -1 1 0 0 1 -1 0 0 #> 204 TCGA-56-8629-01 LUSC 22 0 0 1 NA -1 1 0 NA 1 -1 1 0 #> 205 TCGA-56-A49D-01 LUSC 18 NA -1 NA 0 -1 1 NA -1 0 -1 0 NA #> 206 TCGA-56-A4BW-01 LUSC 16 0 0 NA 0 -1 1 -1 0 1 NA 0 0 #> 207 TCGA-56-A4BX-01 LUSC 17 -1 0 0 NA -1 NA -1 -1 1 -1 0 0 #> 208 TCGA-56-A4BY-01 LUSC 15 0 0 NA NA -1 1 0 0 1 -1 NA NA #> 209 TCGA-56-A4ZJ-01 LUSC 9 0 0 0 0 -1 1 0 NA 1 -1 0 0 #> 210 TCGA-56-A5DS-01 LUSC 12 0 0 1 1 -1 1 0 0 1 -1 0 0 #> 211 TCGA-56-A62T-01 LUSC 25 -1 -1 0 NA -1 1 -1 NA 1 0 0 0 #> 212 TCGA-58-8386-01 LUSC 20 0 0 0 0 -1 1 0 0 1 -1 NA NA #> 213 TCGA-58-8387-01 LUSC 10 0 NA NA 0 NA 1 -1 0 1 -1 0 NA #> 214 TCGA-58-8388-01 LUSC 11 0 1 0 0 -1 1 0 0 1 -1 0 0 #> 215 TCGA-58-8390-01 LUSC 15 0 NA 0 0 -1 1 0 NA 1 -1 0 0 #> 216 TCGA-58-8391-01 LUSC 14 NA NA 1 1 -1 NA 0 NA 1 -1 NA 0 #> 217 TCGA-58-8393-01 LUSC 21 -1 1 0 -1 NA 1 -1 -1 0 -1 1 -1 #> 218 TCGA-58-A46J-01 LUSC 11 0 0 0 0 0 1 -1 -1 1 -1 0 0 #> 219 TCGA-58-A46K-01 LUSC 20 -1 0 0 NA -1 1 -1 -1 1 -1 0 NA #> 220 TCGA-58-A46L-01 LUSC 10 -1 NA 1 NA NA 1 -1 -1 NA -1 0 0 #> 221 TCGA-58-A46M-01 LUSC 19 -1 1 1 1 NA 1 -1 NA 1 NA 0 NA #> 222 TCGA-58-A46N-01 LUSC 15 0 1 1 1 0 1 0 0 1 0 0 0 #> 223 TCGA-60-2695-01 LUSC 22 0 NA -1 -1 -1 1 NA -1 1 -1 NA -1 #> 224 TCGA-60-2697-01 LUSC 1 0 0 0 0 0 0 0 0 1 0 0 0 #> 225 TCGA-60-2698-01 LUSC 21 -1 NA 0 NA -1 NA -1 -1 0 -1 NA 0 #> 226 TCGA-60-2703-01 LUSC 23 0 0 1 NA -1 1 -1 NA 1 -1 1 1 #> 227 TCGA-60-2704-01 LUSC 27 0 0 0 0 -1 1 -1 -1 1 -1 -1 -1 #> 228 TCGA-60-2706-01 LUSC 22 NA 0 0 0 -1 1 0 NA NA -1 1 0 #> 229 TCGA-60-2707-01 LUSC 6 0 0 0 0 -1 1 0 0 1 -1 0 NA #> 230 TCGA-60-2708-01 LUSC 33 -1 0 0 0 -1 1 -1 -1 -1 -1 -1 -1 #> 231 TCGA-60-2709-01 LUSC 31 1 1 1 1 -1 1 -1 -1 1 -1 0 -1 #> 232 TCGA-60-2710-01 LUSC 12 0 0 0 0 -1 1 -1 0 1 -1 0 0 #> 233 TCGA-60-2711-01 LUSC 21 NA NA 1 NA -1 NA -1 NA 1 -1 NA NA #> 234 TCGA-60-2713-01 LUSC 13 NA NA 0 NA -1 1 -1 -1 1 -1 0 0 #> 235 TCGA-60-2714-01 LUSC 25 -1 -1 NA 0 0 NA 0 -1 1 -1 1 1 #> 236 TCGA-60-2716-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 237 TCGA-60-2719-01 LUSC 14 0 0 0 0 -1 NA -1 -1 1 -1 0 0 #> 238 TCGA-60-2720-01 LUSC 13 0 0 0 0 NA 0 -1 -1 1 -1 0 0 #> 239 TCGA-60-2721-01 LUSC 10 NA 1 0 0 -1 1 -1 NA 0 -1 NA 0 #> 240 TCGA-60-2722-01 LUSC 17 -1 NA NA -1 -1 NA -1 NA -1 -1 0 -1 #> 241 TCGA-60-2723-01 LUSC 21 0 0 NA 0 -1 1 -1 -1 1 -1 NA NA #> 242 TCGA-60-2724-01 LUSC 11 0 0 0 0 -1 NA -1 -1 NA -1 0 0 #> 243 TCGA-60-2725-01 LUSC 14 0 0 0 0 -1 1 0 0 0 -1 -1 0 #> 244 TCGA-60-2726-01 LUSC 21 -1 0 NA 0 -1 1 -1 NA 1 -1 NA NA #> 245 TCGA-63-5128-01 LUSC 24 -1 1 0 NA -1 1 -1 -1 1 -1 0 NA #> 246 TCGA-63-5131-01 LUSC 16 NA 1 NA NA -1 1 -1 NA 1 -1 NA 0 #> 247 TCGA-63-6202-01 LUSC 15 0 0 1 NA 0 0 1 0 1 0 0 -1 #> 248 TCGA-63-7020-01 LUSC 31 0 0 0 0 -1 1 -1 -1 1 -1 -1 -1 #> 249 TCGA-63-7021-01 LUSC 6 0 0 0 0 -1 1 0 NA 0 0 -1 0 #> 250 TCGA-63-7022-01 LUSC 4 0 0 0 0 0 1 0 0 1 0 0 0 #> 251 TCGA-63-7023-01 LUSC 12 -1 0 1 NA -1 NA -1 -1 -1 -1 0 0 #> 252 TCGA-63-A5M9-01 LUSC 19 -1 1 NA NA -1 1 0 NA NA -1 0 NA #> 253 TCGA-63-A5MB-01 LUSC 19 -1 NA 1 NA -1 NA NA -1 NA -1 NA NA #> 254 TCGA-63-A5MG-01 LUSC 11 0 0 0 0 NA 0 NA -1 NA -1 0 0 #> 255 TCGA-63-A5MH-01 LUSC 19 0 0 0 -1 -1 NA NA NA 1 -1 0 0 #> 256 TCGA-63-A5MI-01 LUSC 19 NA 0 1 NA -1 NA 0 0 1 -1 NA NA #> 257 TCGA-63-A5MJ-01 LUSC 23 -1 1 1 NA -1 1 NA -1 1 NA -1 1 #> 258 TCGA-63-A5ML-01 LUSC 22 -1 1 0 -1 -1 1 -1 -1 1 -1 0 -1 #> 259 TCGA-63-A5MM-01 LUSC 5 0 0 0 0 -1 0 0 0 0 0 0 0 #> 260 TCGA-63-A5MN-01 LUSC 6 0 0 0 0 0 0 0 0 NA 1 0 0 #> 261 TCGA-63-A5MP-01 LUSC 13 -1 -1 NA NA -1 NA 0 NA 1 -1 NA 0 #> 262 TCGA-63-A5MR-01 LUSC 21 -1 0 1 NA -1 1 -1 -1 0 0 -1 -1 #> 263 TCGA-63-A5MS-01 LUSC 24 -1 1 1 1 -1 1 NA 0 1 -1 1 1 #> 264 TCGA-63-A5MT-01 LUSC 9 0 NA NA 0 NA 0 0 NA 0 -1 0 NA #> 265 TCGA-63-A5MU-01 LUSC 16 0 1 1 1 -1 1 0 NA 1 -1 0 0 #> 266 TCGA-63-A5MV-01 LUSC 13 0 0 NA NA -1 1 0 0 1 -1 0 0 #> 267 TCGA-63-A5MW-01 LUSC 19 0 NA NA NA 0 1 0 -1 1 -1 1 0 #> 268 TCGA-63-A5MY-01 LUSC 10 0 0 NA NA NA 1 -1 NA 1 -1 0 NA #> 269 TCGA-66-2727-01 LUSC 15 NA 1 0 NA -1 1 NA NA 1 NA NA NA #> 270 TCGA-66-2734-01 LUSC 14 0 0 0 0 -1 1 -1 -1 0 -1 0 0 #> 271 TCGA-66-2737-01 LUSC 6 -1 1 0 0 0 NA -1 NA 1 0 0 0 #> 272 TCGA-66-2742-01 LUSC 21 NA NA 0 0 -1 1 -1 -1 1 -1 0 0 #> 273 TCGA-66-2744-01 LUSC 9 0 NA 0 NA 0 1 NA 0 1 0 NA 0 #> 274 TCGA-66-2753-01 LUSC 18 0 0 0 0 0 NA NA -1 1 -1 0 0 #> 275 TCGA-66-2754-01 LUSC 12 NA 0 0 0 -1 0 -1 -1 1 NA NA NA #> 276 TCGA-66-2755-01 LUSC 17 -1 1 0 NA -1 1 0 0 1 -1 0 NA #> 277 TCGA-66-2756-01 LUSC 24 -1 1 NA NA -1 NA -1 -1 1 -1 -1 -1 #> 278 TCGA-66-2757-01 LUSC 15 0 0 0 0 -1 1 0 -1 1 -1 0 0 #> 279 TCGA-66-2758-01 LUSC 16 -1 NA 0 NA -1 1 NA NA 1 NA -1 -1 #> 280 TCGA-66-2759-01 LUSC 19 NA 1 0 1 NA 1 -1 0 1 0 0 1 #> 281 TCGA-66-2763-01 LUSC 8 NA 0 0 NA NA 1 0 -1 0 -1 0 NA #> 282 TCGA-66-2765-01 LUSC 10 0 0 0 0 -1 1 -1 -1 0 NA 1 1 #> 283 TCGA-66-2766-01 LUSC 13 -1 0 NA NA NA 1 NA NA 1 -1 1 0 #> 284 TCGA-66-2767-01 LUSC 19 -1 0 1 NA -1 1 -1 0 0 0 0 0 #> 285 TCGA-66-2768-01 LUSC 6 0 0 0 0 -1 NA 0 0 1 NA 0 0 #> 286 TCGA-66-2769-01 LUSC 20 0 0 NA 0 -1 NA 0 0 1 -1 1 1 #> 287 TCGA-66-2770-01 LUSC 9 -1 0 0 0 -1 NA -1 -1 0 0 0 0 #> 288 TCGA-66-2771-01 LUSC 11 0 0 NA 0 -1 1 -1 NA 1 -1 NA NA #> 289 TCGA-66-2773-01 LUSC 20 -1 NA NA 0 -1 1 -1 -1 NA -1 0 -1 #> 290 TCGA-66-2777-01 LUSC 27 -1 1 1 NA -1 1 -1 -1 1 -1 1 0 #> 291 TCGA-66-2778-01 LUSC 10 0 0 0 0 -1 1 -1 NA 1 -1 0 0 #> 292 TCGA-66-2780-01 LUSC 16 0 0 0 0 -1 1 -1 -1 0 -1 0 NA #> 293 TCGA-66-2781-01 LUSC 22 -1 0 NA 0 -1 1 -1 NA NA -1 1 1 #> 294 TCGA-66-2782-01 LUSC 13 0 0 0 0 -1 0 0 0 0 -1 0 0 #> 295 TCGA-66-2783-01 LUSC 11 0 NA 0 0 -1 1 -1 0 0 NA NA -1 #> 296 TCGA-66-2785-01 LUSC 17 NA 1 0 NA NA NA -1 -1 1 -1 1 NA #> 297 TCGA-66-2786-01 LUSC 16 0 0 0 NA -1 0 -1 NA 1 -1 -1 1 #> 298 TCGA-66-2787-01 LUSC 24 -1 1 1 NA -1 1 0 -1 NA -1 NA 0 #> 299 TCGA-66-2788-01 LUSC 12 0 0 0 0 -1 0 0 0 1 -1 NA NA #> 300 TCGA-66-2789-01 LUSC 14 0 0 1 0 NA 1 0 0 1 -1 -1 0 #> 301 TCGA-66-2790-01 LUSC 12 -1 0 NA 0 -1 1 0 0 NA NA 0 0 #> 302 TCGA-66-2791-01 LUSC 13 -1 0 NA NA -1 NA -1 -1 NA -1 0 NA #> 303 TCGA-66-2792-01 LUSC 23 -1 0 1 NA -1 NA -1 -1 1 -1 -1 NA #> 304 TCGA-66-2793-01 LUSC 26 NA 1 1 0 -1 1 1 -1 -1 -1 1 1 #> 305 TCGA-66-2794-01 LUSC 10 -1 0 0 0 0 NA -1 NA 1 -1 NA 0 #> 306 TCGA-66-2795-01 LUSC 8 -1 NA NA 0 -1 1 -1 -1 NA 0 0 NA #> 307 TCGA-66-2800-01 LUSC 24 -1 0 1 NA -1 1 -1 NA 1 -1 0 0 #> 308 TCGA-68-7755-01 LUSC 14 -1 -1 1 NA -1 NA -1 -1 0 -1 -1 -1 #> 309 TCGA-68-7756-01 LUSC 8 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 310 TCGA-68-7757-01 LUSC 12 NA 0 0 0 -1 0 0 -1 1 -1 -1 0 #> 311 TCGA-68-8250-01 LUSC 19 0 0 NA NA -1 1 1 NA 1 -1 0 0 #> 312 TCGA-68-8251-01 LUSC 24 0 NA 0 0 -1 1 0 0 1 -1 NA 1 #> 313 TCGA-68-A59I-01 LUSC 15 0 0 1 NA -1 NA 0 -1 1 -1 -1 NA #> 314 TCGA-68-A59J-01 LUSC 19 -1 1 NA NA NA NA -1 NA 1 0 NA 0 #> 315 TCGA-6A-AB49-01 LUSC 17 0 0 0 NA -1 0 NA -1 1 -1 NA -1 #> 316 TCGA-70-6722-01 LUSC 22 NA -1 0 -1 -1 0 1 -1 NA -1 0 0 #> 317 TCGA-70-6723-01 LUSC 13 -1 NA 1 NA -1 NA -1 -1 NA -1 NA NA #> 318 TCGA-77-6842-01 LUSC 22 0 0 1 1 -1 1 0 NA 1 -1 0 0 #> 319 TCGA-77-6843-01 LUSC 8 NA 1 0 0 -1 1 0 NA 0 0 0 0 #> 320 TCGA-77-6844-01 LUSC 11 0 NA 0 0 -1 1 0 0 1 -1 0 0 #> 321 TCGA-77-6845-01 LUSC 16 NA 1 1 NA -1 1 -1 0 1 NA NA 0 #> 322 TCGA-77-7139-01 LUSC 19 -1 1 NA NA -1 1 -1 -1 1 -1 0 0 #> 323 TCGA-77-7140-01 LUSC 16 -1 0 NA NA -1 NA -1 NA NA -1 -1 -1 #> 324 TCGA-77-7141-01 LUSC 22 -1 1 1 0 -1 1 0 -1 0 -1 NA -1 #> 325 TCGA-77-7142-01 LUSC 20 NA -1 1 NA -1 1 -1 -1 NA NA NA 0 #> 326 TCGA-77-7335-01 LUSC 12 0 0 1 0 -1 1 -1 NA NA 0 0 0 #> 327 TCGA-77-7337-01 LUSC 14 -1 0 0 NA -1 1 NA 0 1 -1 NA 0 #> 328 TCGA-77-7338-01 LUSC 9 NA 1 0 0 -1 1 0 NA 1 -1 NA 0 #> 329 TCGA-77-7463-01 LUSC 26 NA 1 0 0 -1 NA -1 -1 1 -1 -1 -1 #> 330 TCGA-77-7465-01 LUSC 17 -1 NA NA NA -1 NA -1 -1 1 -1 0 0 #> 331 TCGA-77-8007-01 LUSC 22 0 0 0 NA 0 0 1 0 1 -1 NA -1 #> 332 TCGA-77-8008-01 LUSC 14 0 1 0 0 -1 1 0 0 1 -1 0 0 #> 333 TCGA-77-8009-01 LUSC 24 -1 1 1 NA -1 1 -1 -1 1 NA -1 -1 #> 334 TCGA-77-8128-01 LUSC 16 -1 1 0 0 NA NA -1 -1 1 -1 -1 0 #> 335 TCGA-77-8130-01 LUSC 27 0 0 NA NA -1 NA 0 0 1 -1 1 1 #> 336 TCGA-77-8131-01 LUSC 10 0 0 0 0 0 0 0 0 0 0 -1 NA #> 337 TCGA-77-8133-01 LUSC 21 -1 1 0 0 -1 1 -1 -1 1 0 0 0 #> 338 TCGA-77-8136-01 LUSC 14 0 0 NA NA -1 NA NA -1 NA -1 0 0 #> 339 TCGA-77-8138-01 LUSC 25 1 0 1 1 -1 1 -1 -1 1 -1 NA 1 #> 340 TCGA-77-8139-01 LUSC 25 0 -1 0 0 -1 NA -1 -1 1 -1 NA 0 #> 341 TCGA-77-8140-01 LUSC 14 0 0 0 0 -1 1 0 NA 1 -1 NA 0 #> 342 TCGA-77-8143-01 LUSC 20 0 0 NA 0 NA 1 0 0 1 -1 0 0 #> 343 TCGA-77-8144-01 LUSC 13 NA 0 0 0 -1 NA -1 -1 0 0 0 NA #> 344 TCGA-77-8145-01 LUSC 13 0 1 0 NA -1 1 -1 0 1 -1 0 0 #> 345 TCGA-77-8148-01 LUSC 20 0 1 1 NA -1 1 -1 -1 1 -1 0 0 #> 346 TCGA-77-8150-01 LUSC 21 NA NA 1 NA -1 1 -1 -1 1 -1 -1 -1 #> 347 TCGA-77-8153-01 LUSC 13 NA 0 0 NA -1 NA -1 -1 1 -1 0 0 #> 348 TCGA-77-8154-01 LUSC 11 0 NA 0 NA -1 NA -1 0 1 -1 0 0 #> 349 TCGA-77-8156-01 LUSC 23 0 NA 1 NA -1 NA -1 -1 1 -1 1 -1 #> 350 TCGA-77-A5FZ-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 351 TCGA-77-A5G1-01 LUSC 12 0 0 0 0 -1 NA 0 0 1 -1 0 0 #> 352 TCGA-77-A5G3-01 LUSC 17 -1 NA NA NA -1 1 -1 NA 0 -1 -1 -1 #> 353 TCGA-77-A5G6-01 LUSC 18 0 NA NA 0 -1 1 1 -1 1 -1 0 NA #> 354 TCGA-77-A5G7-01 LUSC 13 0 0 0 0 -1 1 -1 NA NA -1 0 0 #> 355 TCGA-77-A5G8-01 LUSC 23 -1 1 0 0 -1 1 -1 -1 1 -1 -1 -1 #> 356 TCGA-77-A5GB-01 LUSC 9 0 0 0 NA NA NA -1 -1 0 -1 0 -1 #> 357 TCGA-77-A5GF-01 LUSC 26 -1 1 0 NA -1 1 -1 -1 0 -1 NA -1 #> 358 TCGA-77-A5GH-01 LUSC 15 0 0 0 NA -1 1 0 NA 1 -1 0 0 #> 359 TCGA-79-5596-01 LUSC 9 -1 0 0 NA -1 NA -1 0 0 -1 0 0 #> 360 TCGA-85-6175-01 LUSC 23 -1 -1 0 0 -1 NA -1 -1 NA 0 -1 -1 #> 361 TCGA-85-6560-01 LUSC 25 0 0 1 0 -1 1 -1 -1 1 -1 NA 0 #> 362 TCGA-85-6561-01 LUSC 12 -1 0 0 0 -1 1 -1 NA -1 -1 0 0 #> 363 TCGA-85-6798-01 LUSC 19 0 NA 1 NA -1 NA 0 -1 1 -1 1 1 #> 364 TCGA-85-7696-01 LUSC 9 -1 1 0 0 NA 1 -1 NA 1 NA 0 0 #> 365 TCGA-85-7697-01 LUSC 12 0 0 0 0 -1 1 -1 0 0 -1 NA 0 #> 366 TCGA-85-7698-01 LUSC 8 -1 NA 0 NA -1 0 -1 0 NA -1 0 NA #> 367 TCGA-85-7699-01 LUSC 14 0 0 0 -1 -1 NA -1 -1 1 -1 0 0 #> 368 TCGA-85-7710-01 LUSC 8 NA NA 0 NA -1 1 0 0 1 -1 NA -1 #> 369 TCGA-85-7843-01 LUSC 23 -1 -1 1 NA NA 1 -1 NA 1 -1 NA 1 #> 370 TCGA-85-7844-01 LUSC 20 0 NA 0 0 -1 1 -1 -1 1 -1 0 NA #> 371 TCGA-85-7950-01 LUSC 26 NA 0 0 0 -1 1 0 0 1 -1 -1 NA #> 372 TCGA-85-8048-01 LUSC 9 0 0 0 0 NA NA -1 -1 1 0 0 0 #> 373 TCGA-85-8049-01 LUSC 28 -1 1 0 0 -1 1 -1 -1 0 0 NA 0 #> 374 TCGA-85-8052-01 LUSC 22 NA 1 1 0 -1 1 -1 -1 0 -1 1 NA #> 375 TCGA-85-8070-01 LUSC 8 NA 0 NA 0 -1 NA NA NA 1 -1 -1 0 #> 376 TCGA-85-8071-01 LUSC 11 NA 0 0 0 -1 0 -1 0 1 -1 0 0 #> 377 TCGA-85-8072-01 LUSC 19 -1 1 1 NA -1 1 -1 NA 1 -1 NA -1 #> 378 TCGA-85-8276-01 LUSC 24 0 1 1 NA NA 1 -1 -1 1 -1 1 1 #> 379 TCGA-85-8277-01 LUSC 18 -1 1 0 NA -1 NA -1 -1 0 -1 -1 -1 #> 380 TCGA-85-8287-01 LUSC 20 -1 0 0 NA NA 1 0 0 1 -1 1 NA #> 381 TCGA-85-8288-01 LUSC 12 0 0 0 -1 -1 1 NA 0 1 -1 0 0 #> 382 TCGA-85-8350-01 LUSC 21 0 0 NA -1 -1 1 -1 -1 1 NA NA -1 #> 383 TCGA-85-8351-01 LUSC 15 NA 1 0 0 -1 1 -1 NA 1 -1 0 NA #> 384 TCGA-85-8352-01 LUSC 17 -1 1 NA 0 NA 1 -1 -1 NA -1 NA NA #> 385 TCGA-85-8353-01 LUSC 14 -1 NA 0 0 -1 1 -1 -1 0 -1 0 0 #> 386 TCGA-85-8354-01 LUSC 14 0 NA NA 1 NA NA -1 1 0 -1 NA NA #> 387 TCGA-85-8355-01 LUSC 9 0 0 0 NA -1 1 0 0 -1 -1 0 0 #> 388 TCGA-85-8479-01 LUSC 10 0 1 0 0 NA NA 0 -1 NA NA 0 -1 #> 389 TCGA-85-8481-01 LUSC 13 0 0 0 0 -1 NA 0 0 1 -1 0 0 #> 390 TCGA-85-8580-01 LUSC 11 0 0 0 0 -1 1 -1 NA NA -1 0 0 #> 391 TCGA-85-8582-01 LUSC 25 -1 0 -1 NA 0 NA -1 -1 1 -1 0 -1 #> 392 TCGA-85-8584-01 LUSC 7 NA 0 0 0 0 0 0 0 0 0 1 NA #> 393 TCGA-85-8664-01 LUSC 25 0 1 1 -1 -1 1 -1 -1 1 0 0 NA #> 394 TCGA-85-8666-01 LUSC 26 0 1 1 NA -1 NA -1 -1 1 -1 -1 1 #> 395 TCGA-85-A4CL-01 LUSC 10 -1 1 0 0 -1 1 -1 NA 0 0 -1 0 #> 396 TCGA-85-A4CN-01 LUSC 15 -1 0 0 NA -1 NA -1 -1 0 -1 NA 0 #> 397 TCGA-85-A4JB-01 LUSC 22 NA -1 1 -1 -1 0 NA NA NA -1 0 0 #> 398 TCGA-85-A4JC-01 LUSC 22 NA 0 NA 0 -1 1 0 0 1 -1 -1 -1 #> 399 TCGA-85-A4PA-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 400 TCGA-85-A4QQ-01 LUSC 12 0 0 0 0 -1 1 0 -1 1 NA NA 0 #> 401 TCGA-85-A4QR-01 LUSC 23 NA 0 NA 1 -1 1 -1 -1 1 -1 1 -1 #> 402 TCGA-85-A50M-01 LUSC 21 1 1 NA NA 0 0 0 0 1 -1 NA -1 #> 403 TCGA-85-A50Z-01 LUSC 8 0 0 0 0 -1 NA 0 NA NA 0 NA NA #> 404 TCGA-85-A510-01 LUSC 23 -1 NA 0 0 -1 1 -1 -1 1 -1 NA -1 #> 405 TCGA-85-A511-01 LUSC 19 -1 1 NA NA -1 1 NA NA 1 -1 1 0 #> 406 TCGA-85-A512-01 LUSC 11 -1 NA 0 0 -1 NA -1 NA NA -1 NA 0 #> 407 TCGA-85-A513-01 LUSC 4 0 0 0 0 NA NA 0 0 0 NA 0 0 #> 408 TCGA-85-A53L-01 LUSC 14 NA NA NA 0 -1 1 -1 NA 0 -1 0 0 #> 409 TCGA-85-A5B5-01 LUSC 26 -1 1 1 NA -1 1 -1 0 NA -1 -1 -1 #> 410 TCGA-90-7766-01 LUSC 12 0 0 0 0 -1 1 -1 0 1 -1 NA 0 #> 411 TCGA-90-7767-01 LUSC 21 NA 1 NA 0 -1 1 1 0 1 -1 -1 NA #> 412 TCGA-90-7769-01 LUSC 17 -1 -1 0 NA -1 NA -1 NA 1 -1 NA NA #> 413 TCGA-90-7964-01 LUSC 11 1 1 0 0 -1 NA -1 -1 NA -1 0 0 #> 414 TCGA-90-A4ED-01 LUSC 17 NA 1 1 1 0 0 0 0 0 0 0 0 #> 415 TCGA-90-A4EE-01 LUSC 19 -1 1 NA -1 -1 1 -1 -1 NA -1 0 0 #> 416 TCGA-90-A59Q-01 LUSC 26 NA 1 1 1 -1 1 -1 -1 NA NA NA 1 #> 417 TCGA-92-7340-01 LUSC 6 0 0 0 NA 0 NA -1 NA 1 -1 0 0 #> 418 TCGA-92-7341-01 LUSC 23 -1 0 NA NA -1 NA -1 NA 1 -1 -1 -1 #> 419 TCGA-92-8063-01 LUSC 14 0 0 0 0 -1 1 -1 -1 0 -1 NA 0 #> 420 TCGA-92-8064-01 LUSC 23 -1 1 0 -1 -1 1 -1 NA 1 -1 NA 0 #> 421 TCGA-92-8065-01 LUSC 10 0 NA 0 NA -1 1 -1 -1 0 0 NA 0 #> 422 TCGA-94-7033-01 LUSC 7 0 0 0 0 -1 1 NA NA NA -1 0 NA #> 423 TCGA-94-7557-01 LUSC 28 1 1 1 1 -1 1 NA -1 1 -1 0 0 #> 424 TCGA-94-7943-01 LUSC 26 -1 1 1 0 -1 1 -1 -1 1 -1 NA 1 #> 425 TCGA-94-8035-01 LUSC 11 NA 0 0 0 -1 1 -1 NA 1 -1 0 0 #> 426 TCGA-94-8490-01 LUSC 8 -1 NA 1 NA -1 1 -1 NA 0 -1 NA 0 #> 427 TCGA-94-8491-01 LUSC 7 NA NA 1 NA NA NA 0 0 1 NA NA NA #> 428 TCGA-94-A4VJ-01 LUSC 19 0 1 1 0 -1 1 1 NA NA NA 0 1 #> 429 TCGA-94-A5I4-01 LUSC 25 -1 NA NA NA -1 NA -1 NA -1 -1 -1 1 #> 430 TCGA-94-A5I6-01 LUSC 26 NA 1 1 NA -1 1 -1 -1 1 0 0 0 #> 431 TCGA-96-7544-01 LUSC 12 -1 0 0 NA -1 1 0 NA 1 -1 -1 0 #> 432 TCGA-96-7545-01 LUSC 11 -1 0 NA 0 -1 NA 0 NA 1 -1 NA 0 #> 433 TCGA-96-8169-01 LUSC 14 0 1 0 0 -1 1 0 0 1 -1 0 0 #> 434 TCGA-96-8170-01 LUSC 12 0 0 0 0 -1 1 0 0 1 0 0 0 #> 435 TCGA-96-A4JL-01 LUSC 7 NA 1 0 0 NA NA 0 0 0 0 0 0 #> 436 TCGA-98-7454-01 LUSC 16 0 0 0 0 -1 NA -1 -1 -1 -1 0 0 #> 437 TCGA-98-8020-01 LUSC 20 0 0 0 NA NA 1 -1 -1 1 -1 0 0 #> 438 TCGA-98-8021-01 LUSC 13 0 0 0 0 -1 1 NA -1 0 -1 0 0 #> 439 TCGA-98-8022-01 LUSC 20 1 1 NA 0 -1 1 NA -1 1 -1 1 NA #> 440 TCGA-98-8023-01 LUSC 19 -1 0 NA NA -1 NA 0 0 1 -1 0 NA #> 441 TCGA-98-A538-01 LUSC 22 0 0 0 0 -1 1 -1 NA 1 -1 0 -1 #> 442 TCGA-98-A539-01 LUSC 20 -1 NA 0 0 -1 0 -1 -1 1 -1 0 0 #> 443 TCGA-98-A53A-01 LUSC 14 0 NA 0 0 -1 1 NA 0 0 -1 0 0 #> 444 TCGA-98-A53B-01 LUSC 28 NA NA NA 0 -1 1 -1 -1 1 -1 1 1 #> 445 TCGA-98-A53C-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 446 TCGA-98-A53D-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 447 TCGA-98-A53H-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 448 TCGA-98-A53I-01 LUSC 11 -1 NA 1 0 -1 1 -1 -1 1 0 0 NA #> 449 TCGA-98-A53J-01 LUSC 28 -1 1 1 1 -1 1 -1 -1 1 1 -1 1 #> 450 TCGA-J1-A4AH-01 LUSC 23 -1 1 NA NA -1 1 0 NA 1 -1 NA -1 #> 451 TCGA-L3-A4E7-01 LUSC 9 0 0 0 0 -1 0 -1 0 1 -1 NA 0 #> 452 TCGA-L3-A524-01 LUSC 22 -1 1 1 NA 0 1 -1 -1 1 0 0 -1 #> 453 TCGA-LA-A446-01 LUSC 16 -1 NA NA NA -1 1 0 NA 1 -1 1 NA #> 454 TCGA-LA-A7SW-01 LUSC 9 0 1 0 0 NA NA NA NA 1 0 NA NA #> 455 TCGA-MF-A522-01 LUSC 30 -1 1 1 1 -1 1 0 -1 1 -1 1 1 #> 456 TCGA-NC-A5HD-01 LUSC 22 NA 1 0 NA -1 1 -1 -1 1 -1 NA 0 #> 457 TCGA-NC-A5HE-01 LUSC 12 -1 1 0 NA -1 NA -1 -1 0 0 0 0 #> 458 TCGA-NC-A5HF-01 LUSC 12 0 0 0 0 -1 0 -1 -1 1 -1 0 0 #> 459 TCGA-NC-A5HG-01 LUSC 19 -1 1 0 0 -1 0 -1 0 0 -1 0 NA #> 460 TCGA-NC-A5HH-01 LUSC 8 0 NA NA 0 0 1 0 0 1 0 NA NA #> 461 TCGA-NC-A5HI-01 LUSC 12 NA 0 0 0 -1 1 -1 -1 0 NA 0 0 #> 462 TCGA-NC-A5HJ-01 LUSC 17 NA NA 0 NA -1 1 -1 NA 1 -1 NA NA #> 463 TCGA-NC-A5HK-01 LUSC 15 NA NA 1 NA NA 1 -1 -1 1 -1 1 NA #> 464 TCGA-NC-A5HL-01 LUSC 16 -1 NA 0 NA -1 NA -1 -1 NA -1 NA 0 #> 465 TCGA-NC-A5HM-01 LUSC 15 NA 0 NA 0 -1 1 0 -1 NA -1 0 0 #> 466 TCGA-NC-A5HN-01 LUSC 14 NA 0 1 NA -1 1 -1 NA 1 -1 0 -1 #> 467 TCGA-NC-A5HO-01 LUSC 13 -1 0 0 NA -1 NA -1 NA 0 0 NA 0 #> 468 TCGA-NC-A5HP-01 LUSC 18 -1 1 NA 0 -1 1 -1 -1 0 -1 NA 0 #> 469 TCGA-NC-A5HQ-01 LUSC 22 -1 NA 1 0 -1 1 -1 -1 1 0 -1 -1 #> 470 TCGA-NC-A5HR-01 LUSC 17 -1 1 0 NA -1 1 -1 -1 -1 -1 0 -1 #> 471 TCGA-NC-A5HT-01 LUSC 12 0 0 0 0 0 NA 0 NA 1 -1 1 NA #> 472 TCGA-NK-A5CR-01 LUSC 15 NA 0 0 NA -1 NA NA -1 1 -1 NA 0 #> 473 TCGA-NK-A5CT-01 LUSC 18 0 0 0 0 NA NA -1 -1 1 -1 0 0 #> 474 TCGA-NK-A5CX-01 LUSC 22 0 0 -1 -1 -1 1 -1 -1 1 -1 0 0 #> 475 TCGA-NK-A7XE-01 LUSC 13 0 1 1 NA 0 1 0 0 1 0 NA 1 #> 476 TCGA-O2-A52N-01 LUSC 21 0 1 1 0 0 1 NA 1 NA 0 -1 0 #> 477 TCGA-O2-A52Q-01 LUSC 17 NA 0 0 0 -1 0 0 NA 0 0 0 NA #> 478 TCGA-O2-A52S-01 LUSC 14 -1 NA NA 0 -1 NA -1 -1 -1 -1 NA NA #> 479 TCGA-O2-A52V-01 LUSC 12 0 0 0 0 -1 1 -1 -1 0 0 -1 0 #> 480 TCGA-O2-A52W-01 LUSC 28 0 0 1 1 -1 1 -1 -1 1 -1 1 1 #> 481 TCGA-O2-A5IB-01 LUSC 9 NA NA 0 0 -1 1 NA 0 0 NA NA 1 #> 482 TCGA-XC-AA0X-01 LUSC 19 -1 1 NA NA -1 1 -1 -1 1 -1 -1 NA #> 483 TCGA-P7-A5NY-01 PCPG 2 -1 1 0 0 0 0 0 0 0 0 0 0 #> 484 TCGA-P7-A5NY-05 PCPG 19 -1 1 0 0 -1 -1 1 1 0 0 1 1 #> 485 TCGA-P8-A5KC-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 486 TCGA-P8-A5KD-01 PCPG 9 -1 0 0 0 0 -1 0 0 0 0 1 -1 #> 487 TCGA-P8-A6RX-01 PCPG 6 NA 0 0 0 -1 -1 0 0 0 NA 0 0 #> 488 TCGA-P8-A6RY-01 PCPG 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 489 TCGA-PR-A5PF-01 PCPG 8 -1 0 0 0 -1 0 0 0 0 0 0 0 #> 490 TCGA-PR-A5PG-01 PCPG 5 -1 0 0 0 0 0 0 0 0 0 1 NA #> 491 TCGA-PR-A5PH-01 PCPG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 492 TCGA-QR-A6GO-01 PCPG 6 -1 0 0 0 0 -1 0 0 0 0 1 -1 #> 493 TCGA-QR-A6GR-01 PCPG 2 NA 0 0 0 0 0 0 0 0 0 0 0 #> 494 TCGA-QR-A6GS-01 PCPG 2 NA 0 0 0 0 0 -1 0 0 0 0 0 #> 495 TCGA-QR-A6GT-01 PCPG 6 -1 1 0 -1 -1 -1 0 0 0 0 0 0 #> 496 TCGA-QR-A6GU-01 PCPG 5 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 497 TCGA-QR-A6GX-01 PCPG 20 -1 1 0 0 0 0 0 0 1 1 1 1 #> 498 TCGA-QR-A6GY-01 PCPG 5 0 0 -1 0 -1 0 0 0 0 0 0 0 #> 499 TCGA-QR-A6GZ-01 PCPG 23 0 0 1 1 -1 -1 1 0 0 0 1 1 #> 500 TCGA-QR-A6H0-01 PCPG 2 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 501 TCGA-QR-A6H1-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 502 TCGA-QR-A6H2-01 PCPG 1 NA 0 0 0 0 NA 0 0 0 0 0 0 #> 503 TCGA-QR-A6H3-01 PCPG 2 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 504 TCGA-QR-A6H5-01 PCPG 4 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 505 TCGA-QR-A6H6-01 PCPG 5 -1 0 0 -1 0 -1 0 0 0 0 0 0 #> 506 TCGA-QR-A700-01 PCPG 25 -1 -1 1 1 -1 -1 -1 -1 0 0 1 1 #> 507 TCGA-QR-A702-01 PCPG 3 NA 0 0 0 0 -1 0 0 0 0 0 0 #> 508 TCGA-QR-A706-01 PCPG 2 0 0 0 0 NA 0 -1 0 0 0 0 0 #> 509 TCGA-QR-A70C-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 510 TCGA-QR-A70D-01 PCPG 4 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 511 TCGA-QR-A70E-01 PCPG 3 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 512 TCGA-QR-A70G-01 PCPG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 513 TCGA-QR-A70H-01 PCPG 5 -1 0 0 0 0 0 0 0 -1 0 0 0 #> 514 TCGA-QR-A70I-01 PCPG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 515 TCGA-QR-A70J-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 516 TCGA-QR-A70K-01 PCPG 11 -1 1 0 -1 0 0 0 0 1 0 0 0 #> 517 TCGA-QR-A70N-01 PCPG 27 0 0 0 0 -1 -1 -1 -1 0 0 1 1 #> 518 TCGA-QR-A70P-01 PCPG 4 -1 1 0 0 NA 0 0 0 0 0 0 0 #> 519 TCGA-QR-A70W-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 NA #> 520 TCGA-QR-A70X-01 PCPG 3 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 521 TCGA-QR-A7IN-01 PCPG 9 -1 -1 0 0 -1 -1 0 0 -1 NA 0 0 #> 522 TCGA-QR-A7IP-01 PCPG 11 -1 0 1 -1 -1 -1 0 0 0 0 0 0 #> 523 TCGA-QT-A5XJ-01 PCPG 3 NA 0 0 0 -1 -1 0 0 0 NA 0 0 #> 524 TCGA-QT-A5XK-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 525 TCGA-QT-A5XL-01 PCPG 1 NA 0 0 0 -1 NA 0 0 0 NA 0 0 #> 526 TCGA-QT-A5XM-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 527 TCGA-QT-A5XN-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 528 TCGA-QT-A5XO-01 PCPG 2 NA 0 0 0 0 NA 0 NA 0 0 0 0 #> 529 TCGA-QT-A5XP-01 PCPG 4 NA 0 0 0 0 0 0 0 0 0 0 0 #> 530 TCGA-QT-A69Q-01 PCPG 18 -1 -1 -1 -1 0 0 -1 -1 -1 NA 0 0 #> 531 TCGA-QT-A7U0-01 PCPG 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 532 TCGA-RM-A68T-01 PCPG 4 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 533 TCGA-RM-A68W-01 PCPG 5 0 0 0 0 0 0 0 NA 0 0 1 0 #> 534 TCGA-RT-A6Y9-01 PCPG 2 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 535 TCGA-RT-A6YA-01 PCPG 13 -1 0 0 0 -1 -1 -1 -1 0 0 0 0 #> 536 TCGA-RT-A6YC-01 PCPG 3 -1 0 0 0 0 0 0 0 0 0 0 0 #> 537 TCGA-RW-A67V-01 PCPG 1 -1 0 0 0 NA 0 0 0 0 NA 0 0 #> 538 TCGA-RW-A67W-01 PCPG 2 -1 0 0 0 0 NA 0 NA 0 0 0 0 #> 539 TCGA-RW-A67X-01 PCPG 9 0 0 0 0 -1 -1 -1 -1 0 0 0 0 #> 540 TCGA-RW-A67Y-01 PCPG 5 NA 0 0 0 -1 -1 0 0 0 NA 0 0 #> 541 TCGA-RW-A680-01 PCPG 4 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 542 TCGA-RW-A681-01 PCPG 21 NA NA 0 0 0 0 0 0 0 0 0 0 #> 543 TCGA-RW-A684-01 PCPG 3 -1 0 0 0 0 0 0 0 0 0 1 0 #> 544 TCGA-RW-A685-01 PCPG 4 -1 0 0 0 1 -1 0 0 0 0 0 0 #> 545 TCGA-RW-A686-01 PCPG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 546 TCGA-RW-A686-06 PCPG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 547 TCGA-RW-A688-01 PCPG 4 -1 0 0 0 1 -1 0 1 0 0 0 0 #> 548 TCGA-RW-A689-01 PCPG 5 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 549 TCGA-RW-A68A-01 PCPG 8 -1 0 NA 0 -1 -1 0 0 0 0 0 0 #> 550 TCGA-RW-A68B-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 551 TCGA-RW-A68C-01 PCPG 5 0 0 0 0 -1 -1 NA -1 0 0 0 0 #> 552 TCGA-RW-A68D-01 PCPG 3 0 0 1 0 0 0 1 0 0 0 0 0 #> 553 TCGA-RW-A68F-01 PCPG 5 0 0 1 0 0 0 0 0 0 0 0 0 #> 554 TCGA-RW-A68G-01 PCPG 3 0 0 -1 0 0 0 0 0 0 0 0 0 #> 555 TCGA-RW-A7CZ-01 PCPG 4 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 556 TCGA-RW-A7D0-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 557 TCGA-RW-A8AZ-01 PCPG 4 -1 NA 0 0 0 0 0 0 0 0 0 0 #> 558 TCGA-RX-A8JQ-01 PCPG 3 -1 1 0 0 0 0 0 0 0 0 0 0 #> 559 TCGA-S7-A7WL-01 PCPG 8 NA 1 0 0 -1 -1 0 0 1 0 0 0 #> 560 TCGA-S7-A7WM-01 PCPG 4 -1 0 0 0 -1 0 0 0 0 0 0 NA #> 561 TCGA-S7-A7WN-01 PCPG 4 -1 0 0 0 0 0 0 0 0 0 1 -1 #> 562 TCGA-S7-A7WO-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 563 TCGA-S7-A7WP-01 PCPG 6 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 564 TCGA-S7-A7WQ-01 PCPG 10 -1 -1 0 0 -1 -1 0 0 0 0 0 0 #> 565 TCGA-S7-A7WR-01 PCPG 8 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 566 TCGA-S7-A7WT-01 PCPG 3 -1 0 0 0 -1 0 0 0 0 0 0 0 #> 567 TCGA-S7-A7WU-01 PCPG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 568 TCGA-S7-A7WV-01 PCPG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 569 TCGA-S7-A7WW-01 PCPG 10 0 0 0 0 0 0 0 0 0 0 0 0 #> 570 TCGA-S7-A7WX-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 571 TCGA-S7-A7X0-01 PCPG 6 -1 0 0 -1 -1 -1 0 0 0 0 0 0 #> 572 TCGA-S7-A7X1-01 PCPG 6 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 573 TCGA-S7-A7X2-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 574 TCGA-SA-A6C2-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 575 TCGA-SP-A6QC-01 PCPG 5 -1 1 0 -1 0 0 0 0 0 0 0 0 #> 576 TCGA-SP-A6QD-01 PCPG 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 577 TCGA-SP-A6QF-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 578 TCGA-SP-A6QG-01 PCPG 5 -1 0 0 -1 -1 -1 0 0 0 0 0 0 #> 579 TCGA-SP-A6QI-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 580 TCGA-SP-A6QJ-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 581 TCGA-SP-A6QK-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 582 TCGA-SQ-A6I4-01 PCPG 2 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 583 TCGA-SQ-A6I6-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 584 TCGA-SR-A6MP-01 PCPG 6 NA 0 0 0 0 -1 0 0 0 0 0 0 #> 585 TCGA-SR-A6MQ-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 NA 0 0 #> 586 TCGA-SR-A6MS-01 PCPG 6 -1 0 0 0 0 0 0 0 0 0 0 0 #> 587 TCGA-SR-A6MT-01 PCPG 24 -1 -1 -1 -1 -1 -1 -1 -1 0 0 -1 -1 #> 588 TCGA-SR-A6MU-01 PCPG 4 -1 0 0 0 0 0 0 0 0 0 0 0 #> 589 TCGA-SR-A6MV-01 PCPG 10 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 590 TCGA-SR-A6MX-01 PCPG 5 -1 0 0 -1 NA -1 0 0 0 0 NA NA #> 591 TCGA-SR-A6MX-05 PCPG 6 -1 0 0 -1 NA -1 0 0 0 0 NA 0 #> 592 TCGA-SR-A6MX-06 PCPG 8 -1 0 0 -1 NA -1 0 0 0 0 NA NA #> 593 TCGA-SR-A6MY-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 NA 0 -1 #> 594 TCGA-SR-A6MZ-01 PCPG 7 -1 1 0 0 0 NA 0 0 0 1 0 0 #> 595 TCGA-SR-A6N0-01 PCPG 11 0 0 0 0 0 0 0 0 1 1 0 0 #> 596 TCGA-TT-A6YJ-01 PCPG 4 -1 NA 0 0 0 -1 0 0 0 0 0 -1 #> 597 TCGA-TT-A6YK-01 PCPG 7 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 598 TCGA-TT-A6YN-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 599 TCGA-TT-A6YO-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 600 TCGA-TT-A6YP-01 PCPG 6 0 0 0 0 -1 -1 -1 -1 0 0 0 0 #> 601 TCGA-W2-A7H5-01 PCPG 25 -1 0 0 0 -1 -1 0 0 1 1 1 1 #> 602 TCGA-W2-A7H7-01 PCPG 7 NA 0 0 0 -1 -1 0 0 -1 0 0 0 #> 603 TCGA-W2-A7HA-01 PCPG 5 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 604 TCGA-W2-A7HB-01 PCPG 6 -1 0 -1 -1 0 -1 0 0 0 0 0 0 #> 605 TCGA-W2-A7HC-01 PCPG 6 -1 0 0 0 0 -1 0 0 0 0 0 -1 #> 606 TCGA-W2-A7HD-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 607 TCGA-W2-A7HE-01 PCPG 6 -1 0 0 0 0 0 0 0 0 0 0 0 #> 608 TCGA-W2-A7HF-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 609 TCGA-W2-A7HH-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 610 TCGA-W2-A7UY-01 PCPG 11 -1 0 0 0 -1 -1 0 0 -1 0 0 -1 #> 611 TCGA-WB-A80K-01 PCPG 5 NA 0 0 0 0 0 1 1 1 1 0 0 #> 612 TCGA-WB-A80L-01 PCPG 15 0 0 0 0 0 0 0 0 0 0 1 1 #> 613 TCGA-WB-A80M-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 NA 0 0 #> 614 TCGA-WB-A80N-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 615 TCGA-WB-A80O-01 PCPG 5 -1 0 0 0 0 0 0 0 0 0 0 -1 #> 616 TCGA-WB-A80P-01 PCPG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 617 TCGA-WB-A80Q-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 618 TCGA-WB-A80V-01 PCPG 8 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 619 TCGA-WB-A80Y-01 PCPG 2 0 0 0 0 NA 0 0 NA 0 0 0 0 #> 620 TCGA-WB-A814-01 PCPG 3 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 621 TCGA-WB-A815-01 PCPG 10 0 1 -1 0 -1 0 0 0 1 0 0 0 #> 622 TCGA-WB-A816-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 623 TCGA-WB-A817-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 624 TCGA-WB-A818-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 625 TCGA-WB-A819-01 PCPG 4 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 626 TCGA-WB-A81A-01 PCPG 10 0 0 0 0 0 0 0 0 1 0 0 0 #> 627 TCGA-WB-A81D-01 PCPG 1 NA 0 1 0 0 0 0 0 0 0 0 0 #> 628 TCGA-WB-A81E-01 PCPG 3 -1 -1 0 0 -1 0 0 0 0 0 0 0 #> 629 TCGA-WB-A81F-01 PCPG 2 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 630 TCGA-WB-A81G-01 PCPG 3 -1 1 0 0 0 -1 0 0 0 0 0 0 #> 631 TCGA-WB-A81H-01 PCPG 4 -1 0 0 0 0 0 0 0 0 0 0 0 #> 632 TCGA-WB-A81I-01 PCPG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 633 TCGA-WB-A81J-01 PCPG 4 0 0 0 0 0 0 -1 1 0 0 0 0 #> 634 TCGA-WB-A81K-01 PCPG 2 NA 0 0 0 NA NA 0 0 0 NA 0 0 #> 635 TCGA-WB-A81M-01 PCPG 2 NA 0 0 0 0 0 0 0 0 0 0 0 #> 636 TCGA-WB-A81N-01 PCPG 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 637 TCGA-WB-A81P-01 PCPG 2 NA 0 0 0 0 0 0 0 0 0 0 0 #> 638 TCGA-WB-A81Q-01 PCPG 7 -1 1 0 0 0 NA 0 0 0 0 0 0 #> 639 TCGA-WB-A81R-01 PCPG 5 -1 0 0 0 0 NA 0 0 0 0 0 -1 #> 640 TCGA-WB-A81S-01 PCPG 12 -1 0 0 0 0 NA 0 0 0 NA -1 -1 #> 641 TCGA-WB-A81T-01 PCPG 6 -1 0 0 0 0 -1 0 NA 1 0 0 NA #> 642 TCGA-WB-A81V-01 PCPG 4 -1 NA 0 0 0 0 0 0 0 0 0 0 #> 643 TCGA-WB-A81W-01 PCPG 7 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 644 TCGA-WB-A821-01 PCPG 25 -1 -1 -1 -1 -1 -1 -1 -1 1 1 1 1 #> 645 TCGA-WB-A822-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 646 TCGA-XG-A823-01 PCPG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 647 TCGA-4C-A93U-01 THCA 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 648 TCGA-BJ-A0YZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 649 TCGA-BJ-A0Z0-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 650 TCGA-BJ-A0Z2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 651 TCGA-BJ-A0Z3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 652 TCGA-BJ-A0Z9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 653 TCGA-BJ-A0ZA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 654 TCGA-BJ-A0ZB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 655 TCGA-BJ-A0ZC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 656 TCGA-BJ-A0ZE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 657 TCGA-BJ-A0ZG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 658 TCGA-BJ-A0ZH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 659 TCGA-BJ-A0ZJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 660 TCGA-BJ-A18Y-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 661 TCGA-BJ-A18Z-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 662 TCGA-BJ-A191-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 663 TCGA-BJ-A28R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 664 TCGA-BJ-A28S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 665 TCGA-BJ-A28T-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 666 TCGA-BJ-A28V-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 667 TCGA-BJ-A28X-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 668 TCGA-BJ-A290-01 THCA 2 0 1 0 1 0 0 0 0 0 0 0 0 #> 669 TCGA-BJ-A291-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 670 TCGA-BJ-A2N7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 671 TCGA-BJ-A2N8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 672 TCGA-BJ-A2N9-01 THCA 8 0 0 0 0 0 0 0 0 1 1 0 0 #> 673 TCGA-BJ-A2NA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 674 TCGA-BJ-A2P4-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 675 TCGA-BJ-A3EZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 676 TCGA-BJ-A3F0-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 677 TCGA-BJ-A3PR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 678 TCGA-BJ-A3PT-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 679 TCGA-BJ-A3PU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 680 TCGA-BJ-A45D-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 681 TCGA-BJ-A45E-01 THCA 7 0 0 0 0 0 0 0 0 0 0 0 0 #> 682 TCGA-BJ-A45F-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 683 TCGA-BJ-A45G-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 684 TCGA-BJ-A45H-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 685 TCGA-BJ-A45I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 686 TCGA-BJ-A45K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 687 TCGA-BJ-A4O8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 688 TCGA-BJ-A4O9-01 THCA 0 0 0 0 0 0 0 0 0 NA 0 0 0 #> 689 TCGA-CE-A13K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 690 TCGA-CE-A27D-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 691 TCGA-CE-A3MD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 692 TCGA-CE-A3ME-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 693 TCGA-CE-A482-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 694 TCGA-CE-A483-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 695 TCGA-CE-A484-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 696 TCGA-CE-A485-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 697 TCGA-DE-A0XZ-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 698 TCGA-DE-A0Y2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 699 TCGA-DE-A0Y3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 700 TCGA-DE-A2OL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 701 TCGA-DE-A3KN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 702 TCGA-DE-A4M8-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 703 TCGA-DE-A4M9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 704 TCGA-DE-A4MA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 705 TCGA-DE-A4MB-01 THCA 3 0 1 0 0 0 0 0 0 1 0 0 0 #> 706 TCGA-DE-A4MC-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 707 TCGA-DE-A4MD-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 708 TCGA-DE-A4MD-06 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 709 TCGA-DE-A69J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 710 TCGA-DE-A69K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 711 TCGA-DE-A7U5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 712 TCGA-DJ-A13L-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 713 TCGA-DJ-A13M-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 714 TCGA-DJ-A13O-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 715 TCGA-DJ-A13P-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 716 TCGA-DJ-A13R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 717 TCGA-DJ-A13S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 718 TCGA-DJ-A13T-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 719 TCGA-DJ-A13U-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 720 TCGA-DJ-A13V-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 721 TCGA-DJ-A13W-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 722 TCGA-DJ-A13X-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 723 TCGA-DJ-A1QD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 724 TCGA-DJ-A1QE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 725 TCGA-DJ-A1QF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 726 TCGA-DJ-A1QG-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 727 TCGA-DJ-A1QH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 728 TCGA-DJ-A1QI-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 729 TCGA-DJ-A1QL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 730 TCGA-DJ-A1QM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 731 TCGA-DJ-A1QN-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 732 TCGA-DJ-A1QO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 733 TCGA-DJ-A1QQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 734 TCGA-DJ-A2PN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 735 TCGA-DJ-A2PO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 736 TCGA-DJ-A2PP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 737 TCGA-DJ-A2PQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 738 TCGA-DJ-A2PR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 739 TCGA-DJ-A2PS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 740 TCGA-DJ-A2PT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 741 TCGA-DJ-A2PU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 742 TCGA-DJ-A2PV-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 743 TCGA-DJ-A2PW-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 744 TCGA-DJ-A2PX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 745 TCGA-DJ-A2PY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 746 TCGA-DJ-A2PZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 747 TCGA-DJ-A2Q0-01 THCA 18 0 0 -1 -1 0 0 0 0 0 0 1 1 #> 748 TCGA-DJ-A2Q1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 749 TCGA-DJ-A2Q2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 750 TCGA-DJ-A2Q3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 751 TCGA-DJ-A2Q4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 752 TCGA-DJ-A2Q5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 753 TCGA-DJ-A2Q6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 754 TCGA-DJ-A2Q7-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 755 TCGA-DJ-A2Q8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 756 TCGA-DJ-A2QA-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 757 TCGA-DJ-A2QB-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 758 TCGA-DJ-A2QC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 759 TCGA-DJ-A3UK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 760 TCGA-DJ-A3UM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 761 TCGA-DJ-A3UN-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 762 TCGA-DJ-A3UO-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 763 TCGA-DJ-A3UP-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 764 TCGA-DJ-A3UQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 765 TCGA-DJ-A3UR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 766 TCGA-DJ-A3UT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 767 TCGA-DJ-A3UU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 768 TCGA-DJ-A3UW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 769 TCGA-DJ-A3UY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 770 TCGA-DJ-A3V0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 771 TCGA-DJ-A3V2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 772 TCGA-DJ-A3V3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 773 TCGA-DJ-A3V4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 774 TCGA-DJ-A3V5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 775 TCGA-DJ-A3V8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 776 TCGA-DJ-A3V9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 777 TCGA-DJ-A3VB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 778 TCGA-DJ-A3VD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 779 TCGA-DJ-A3VE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 780 TCGA-DJ-A3VF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 781 TCGA-DJ-A3VG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 782 TCGA-DJ-A3VI-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 783 TCGA-DJ-A3VJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 784 TCGA-DJ-A3VK-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 785 TCGA-DJ-A3VL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 786 TCGA-DJ-A3VM-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 787 TCGA-DJ-A4UL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 788 TCGA-DJ-A4UP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 789 TCGA-DJ-A4UQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 790 TCGA-DJ-A4UR-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 791 TCGA-DJ-A4UT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 792 TCGA-DJ-A4UW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 793 TCGA-DJ-A4V0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 794 TCGA-DJ-A4V2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 795 TCGA-DJ-A4V4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 796 TCGA-DJ-A4V5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 797 TCGA-DO-A1JZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 798 TCGA-DO-A1K0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 799 TCGA-DO-A2HM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 800 TCGA-E3-A3DY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 801 TCGA-E3-A3DZ-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 802 TCGA-E3-A3E0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 803 TCGA-E3-A3E1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 804 TCGA-E3-A3E2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 805 TCGA-E3-A3E3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 806 TCGA-E3-A3E5-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 807 TCGA-E8-A242-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 808 TCGA-E8-A3X7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 809 TCGA-E8-A413-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 810 TCGA-E8-A414-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 811 TCGA-E8-A417-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 812 TCGA-E8-A418-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 813 TCGA-E8-A419-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 814 TCGA-E8-A432-01 THCA 9 -1 0 0 0 0 0 0 0 0 0 0 0 #> 815 TCGA-E8-A434-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 816 TCGA-E8-A437-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 817 TCGA-E8-A438-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 818 TCGA-E8-A44K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 819 TCGA-EL-A3CL-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 820 TCGA-EL-A3CM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 821 TCGA-EL-A3CN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 822 TCGA-EL-A3CO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 823 TCGA-EL-A3CP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 824 TCGA-EL-A3CR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 825 TCGA-EL-A3CS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 826 TCGA-EL-A3CT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 827 TCGA-EL-A3CU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 828 TCGA-EL-A3CV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 829 TCGA-EL-A3CX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 830 TCGA-EL-A3CZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 831 TCGA-EL-A3D1-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 832 TCGA-EL-A3D4-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 833 TCGA-EL-A3D6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 834 TCGA-EL-A3GO-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 835 TCGA-EL-A3GP-01 THCA 8 0 1 0 0 0 0 0 0 0 0 0 0 #> 836 TCGA-EL-A3GQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 837 TCGA-EL-A3GR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 838 TCGA-EL-A3GS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 839 TCGA-EL-A3GU-01 THCA 2 0 1 0 0 0 0 0 0 1 0 0 0 #> 840 TCGA-EL-A3GV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 841 TCGA-EL-A3GW-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 842 TCGA-EL-A3GY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 843 TCGA-EL-A3H1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 844 TCGA-EL-A3H2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 -1 #> 845 TCGA-EL-A3H3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 846 TCGA-EL-A3H4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 847 TCGA-EL-A3H5-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 848 TCGA-EL-A3H7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 849 TCGA-EL-A3H8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 850 TCGA-EL-A3MW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 851 TCGA-EL-A3MX-01 THCA 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 852 TCGA-EL-A3MY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 853 TCGA-EL-A3MZ-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 854 TCGA-EL-A3N2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 855 TCGA-EL-A3N3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 856 TCGA-EL-A3T1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 857 TCGA-EL-A3T2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 858 TCGA-EL-A3T3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 859 TCGA-EL-A3T6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 860 TCGA-EL-A3T7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 861 TCGA-EL-A3T8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 862 TCGA-EL-A3T9-01 THCA 11 0 1 0 0 0 0 0 0 1 1 0 0 #> 863 TCGA-EL-A3TA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 864 TCGA-EL-A3TB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 865 TCGA-EL-A3ZG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 866 TCGA-EL-A3ZH-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 867 TCGA-EL-A3ZK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 868 TCGA-EL-A3ZL-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 869 TCGA-EL-A3ZM-01 THCA 6 0 0 0 0 0 0 0 0 1 1 0 0 #> 870 TCGA-EL-A3ZN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 871 TCGA-EL-A3ZO-01 THCA 4 0 1 0 0 0 0 0 0 1 0 0 0 #> 872 TCGA-EL-A3ZP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 873 TCGA-EL-A3ZQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 874 TCGA-EL-A3ZR-01 THCA 8 0 0 0 0 0 0 0 0 0 0 0 0 #> 875 TCGA-EL-A3ZS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 876 TCGA-EL-A3ZT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 877 TCGA-EL-A4JV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 878 TCGA-EL-A4JW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 879 TCGA-EL-A4JX-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 880 TCGA-EL-A4JZ-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 881 TCGA-EL-A4K0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 882 TCGA-EL-A4K1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 883 TCGA-EL-A4K2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 884 TCGA-EL-A4K4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 885 TCGA-EL-A4K6-01 THCA 5 0 0 0 0 0 0 0 0 0 0 0 0 #> 886 TCGA-EL-A4K7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 887 TCGA-EL-A4K9-01 THCA 2 0 0 0 0 0 0 0 0 0 1 0 0 #> 888 TCGA-EL-A4KD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 889 TCGA-EL-A4KG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 890 TCGA-EL-A4KH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 891 TCGA-EL-A4KI-01 THCA 19 0 0 0 0 0 0 0 0 1 1 0 0 #> 892 TCGA-EM-A1CS-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 893 TCGA-EM-A1CT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 894 TCGA-EM-A1CU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 895 TCGA-EM-A1CV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 896 TCGA-EM-A1CW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 897 TCGA-EM-A1YA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 898 TCGA-EM-A1YB-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 899 TCGA-EM-A1YE-01 THCA 12 -1 -1 -1 -1 0 -1 0 0 0 0 0 -1 #> 900 TCGA-EM-A22I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 901 TCGA-EM-A22J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 902 TCGA-EM-A22K-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 903 TCGA-EM-A22L-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 904 TCGA-EM-A22M-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 905 TCGA-EM-A22N-01 THCA 23 0 0 -1 -1 NA 1 1 1 1 1 0 0 #> 906 TCGA-EM-A22O-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 907 TCGA-EM-A22P-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 908 TCGA-EM-A22Q-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 909 TCGA-EM-A2CJ-01 THCA 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 910 TCGA-EM-A2CK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 911 TCGA-EM-A2CL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 912 TCGA-EM-A2CM-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 913 TCGA-EM-A2CN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 914 TCGA-EM-A2CO-01 THCA 6 0 0 -1 -1 NA 0 0 0 0 0 0 0 #> 915 TCGA-EM-A2CP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 916 TCGA-EM-A2CQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 917 TCGA-EM-A2CT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 918 TCGA-EM-A2OV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 919 TCGA-EM-A2OW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 920 TCGA-EM-A2OX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 921 TCGA-EM-A2OY-01 THCA 21 0 0 -1 -1 0 0 0 0 1 1 0 0 #> 922 TCGA-EM-A2OZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 923 TCGA-EM-A2P0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 924 TCGA-EM-A2P1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 925 TCGA-EM-A2P1-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 926 TCGA-EM-A2P2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 927 TCGA-EM-A2P3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 928 TCGA-EM-A3AI-01 THCA 13 0 0 0 0 0 0 0 0 1 1 0 0 #> 929 TCGA-EM-A3AJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 930 TCGA-EM-A3AK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 931 TCGA-EM-A3AL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 932 TCGA-EM-A3AN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 933 TCGA-EM-A3AO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 934 TCGA-EM-A3AP-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 935 TCGA-EM-A3AR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 936 TCGA-EM-A3FJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 937 TCGA-EM-A3FK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 938 TCGA-EM-A3FL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 939 TCGA-EM-A3FM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 940 TCGA-EM-A3FN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 941 TCGA-EM-A3FO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 942 TCGA-EM-A3FP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 943 TCGA-EM-A3FQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 944 TCGA-EM-A3FQ-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 945 TCGA-EM-A3FR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 946 TCGA-EM-A3O3-01 THCA 4 0 1 0 0 0 0 0 0 1 0 0 0 #> 947 TCGA-EM-A3O6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 948 TCGA-EM-A3O7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 949 TCGA-EM-A3O8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 950 TCGA-EM-A3O9-01 THCA 20 0 0 -1 -1 0 0 0 0 0 0 0 0 #> 951 TCGA-EM-A3OA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 952 TCGA-EM-A3OB-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 953 TCGA-EM-A3ST-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 954 TCGA-EM-A3SU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 955 TCGA-EM-A3SU-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 956 TCGA-EM-A3SX-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 957 TCGA-EM-A3SY-01 THCA 26 0 0 -1 -1 0 0 0 0 1 1 0 0 #> 958 TCGA-EM-A3SZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 959 TCGA-EM-A4FF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 960 TCGA-EM-A4FH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 961 TCGA-EM-A4FK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 962 TCGA-EM-A4FM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 963 TCGA-EM-A4FN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 964 TCGA-EM-A4FO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 965 TCGA-EM-A4FQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 966 TCGA-EM-A4FR-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 967 TCGA-EM-A4FU-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 968 TCGA-EM-A4FV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 969 TCGA-EM-A4G1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 970 TCGA-ET-A25G-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 971 TCGA-ET-A25I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 972 TCGA-ET-A25J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 973 TCGA-ET-A25K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 974 TCGA-ET-A25L-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 975 TCGA-ET-A25O-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 976 TCGA-ET-A25P-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 977 TCGA-ET-A25R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 978 TCGA-ET-A2MX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 979 TCGA-ET-A2MY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 980 TCGA-ET-A2MZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 981 TCGA-ET-A2N0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 982 TCGA-ET-A2N1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 983 TCGA-ET-A2N3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 984 TCGA-ET-A2N4-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 985 TCGA-ET-A2N5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 986 TCGA-ET-A39I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 987 TCGA-ET-A39J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 988 TCGA-ET-A39K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 989 TCGA-ET-A39L-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 990 TCGA-ET-A39M-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 991 TCGA-ET-A39N-01 THCA 21 -1 -1 0 -1 -1 -1 -1 -1 0 0 -1 -1 #> 992 TCGA-ET-A39O-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 993 TCGA-ET-A39P-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 994 TCGA-ET-A39R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 995 TCGA-ET-A39S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 996 TCGA-ET-A39T-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 997 TCGA-ET-A3BN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 998 TCGA-ET-A3BO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 999 TCGA-ET-A3BP-01 THCA 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 1000 TCGA-ET-A3BQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1001 TCGA-ET-A3BS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1002 TCGA-ET-A3BT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1003 TCGA-ET-A3BU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1004 TCGA-ET-A3BV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1005 TCGA-ET-A3BW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1006 TCGA-ET-A3BX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1007 TCGA-ET-A3DO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1008 TCGA-ET-A3DP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1009 TCGA-ET-A3DQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1010 TCGA-ET-A3DR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1011 TCGA-ET-A3DS-01 THCA 5 0 0 -1 0 0 0 0 0 0 0 0 0 #> 1012 TCGA-ET-A3DT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1013 TCGA-ET-A3DU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1014 TCGA-ET-A3DV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1015 TCGA-ET-A3DW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1016 TCGA-ET-A40P-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1017 TCGA-ET-A40Q-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1018 TCGA-ET-A40S-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1019 TCGA-ET-A40T-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1020 TCGA-ET-A4KN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1021 TCGA-ET-A4KQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1022 TCGA-FE-A22Z-01 THCA 1 0 0 0 0 0 0 0 NA 0 NA 0 0 #> 1023 TCGA-FE-A230-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1024 TCGA-FE-A231-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1025 TCGA-FE-A232-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1026 TCGA-FE-A233-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1027 TCGA-FE-A234-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1028 TCGA-FE-A235-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1029 TCGA-FE-A236-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1030 TCGA-FE-A237-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1031 TCGA-FE-A23A-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1032 TCGA-FE-A3PA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1033 TCGA-FE-A3PB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1034 TCGA-FE-A3PC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1035 TCGA-FE-A3PD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1036 TCGA-FK-A3S3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1037 TCGA-FK-A3SB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1038 TCGA-FK-A3SD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1039 TCGA-FK-A3SE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1040 TCGA-FK-A3SG-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1041 TCGA-FK-A3SH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1042 TCGA-FK-A4UB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1043 TCGA-FY-A2QD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1044 TCGA-FY-A3BL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1045 TCGA-FY-A3I4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1046 TCGA-FY-A3I5-01 THCA 17 -1 -1 -1 -1 -1 -1 0 0 0 0 -1 -1 #> 1047 TCGA-FY-A3NM-01 THCA 13 1 1 0 0 0 0 1 1 1 1 0 0 #> 1048 TCGA-FY-A3NN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1049 TCGA-FY-A3ON-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1050 TCGA-FY-A3R6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1051 TCGA-FY-A3R7-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1052 TCGA-FY-A3R8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1053 TCGA-FY-A3R9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1054 TCGA-FY-A3RA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1055 TCGA-FY-A3TY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1056 TCGA-FY-A3W9-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1057 TCGA-FY-A3WA-01 THCA 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 1058 TCGA-FY-A3YR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1059 TCGA-FY-A40K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1060 TCGA-FY-A40L-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1061 TCGA-FY-A40M-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1062 TCGA-FY-A40N-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1063 TCGA-FY-A4B0-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1064 TCGA-FY-A4B3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1065 TCGA-FY-A4B4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1066 TCGA-FY-A76V-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1067 TCGA-GE-A2C6-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1068 TCGA-H2-A26U-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1069 TCGA-H2-A2K9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1070 TCGA-H2-A3RH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1071 TCGA-H2-A3RI-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1072 TCGA-H2-A421-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1073 TCGA-H2-A422-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1074 TCGA-IM-A3EB-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1075 TCGA-IM-A3ED-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1076 TCGA-IM-A3U2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1077 TCGA-IM-A3U3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1078 TCGA-IM-A41Y-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1079 TCGA-IM-A41Z-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1080 TCGA-IM-A420-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1081 TCGA-IM-A4EB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1082 TCGA-J8-A3NZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1083 TCGA-J8-A3O0-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1084 TCGA-J8-A3O1-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1085 TCGA-J8-A3O2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1086 TCGA-J8-A3O2-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1087 TCGA-J8-A3YD-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1088 TCGA-J8-A3YE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1089 TCGA-J8-A3YF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1090 TCGA-J8-A3YG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1091 TCGA-J8-A3YH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1092 TCGA-J8-A3YH-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1093 TCGA-J8-A42S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1094 TCGA-J8-A4HW-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1095 TCGA-J8-A4HW-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1096 TCGA-J8-A4HY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1097 TCGA-KS-A41F-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1098 TCGA-KS-A41I-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1099 TCGA-KS-A41J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1100 TCGA-KS-A41L-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1101 TCGA-KS-A4I1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1102 TCGA-KS-A4I3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1103 TCGA-KS-A4I5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1104 TCGA-KS-A4I7-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1105 TCGA-KS-A4I9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1106 TCGA-KS-A4IB-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1107 TCGA-KS-A4IC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1108 TCGA-KS-A4ID-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1109 TCGA-L6-A4EP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1110 TCGA-L6-A4EQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1111 TCGA-L6-A4ET-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1112 TCGA-L6-A4EU-01 THCA 1 0 1 0 0 0 0 0 0 NA 0 0 0 #> 1113 TCGA-MK-A4N6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1114 TCGA-MK-A4N7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1115 TCGA-MK-A4N9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1116 TCGA-MK-A84Z-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1117 TCGA-QD-A8IV-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1118 TCGA-FA-8693-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1119 TCGA-FA-A4BB-01 DLBC 1 0 NA 0 0 0 0 0 0 0 0 NA 0 #> 1120 TCGA-FA-A4XK-01 DLBC 7 0 0 0 0 0 0 0 0 NA 0 0 NA #> 1121 TCGA-FA-A6HN-01 DLBC 0 0 NA 0 0 0 0 0 0 0 0 NA 0 #> 1122 TCGA-FA-A6HO-01 DLBC 24 -1 0 NA -1 1 1 -1 NA NA 0 1 NA #> 1123 TCGA-FA-A7DS-01 DLBC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1124 TCGA-FA-A7Q1-01 DLBC 9 0 1 0 0 NA 0 0 0 1 1 0 0 #> 1125 TCGA-FA-A82F-01 DLBC 23 -1 -1 NA -1 0 0 -1 -1 -1 -1 1 -1 #> 1126 TCGA-FA-A86F-01 DLBC 2 0 NA 0 0 0 0 0 0 1 0 0 0 #> 1127 TCGA-FF-8041-01 DLBC 15 0 0 1 NA 0 0 0 0 1 1 0 0 #> 1128 TCGA-FF-8042-01 DLBC 7 0 0 0 0 1 1 0 0 0 NA 1 NA #> 1129 TCGA-FF-8043-01 DLBC 9 0 NA NA NA 0 0 0 -1 0 0 0 0 #> 1130 TCGA-FF-8046-01 DLBC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1131 TCGA-FF-8047-01 DLBC 5 0 NA 0 0 0 1 0 -1 0 0 0 0 #> 1132 TCGA-FF-8061-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1133 TCGA-FF-8062-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1134 TCGA-FF-A7CQ-01 DLBC 4 0 0 0 0 NA NA 0 0 0 0 NA 0 #> 1135 TCGA-FF-A7CR-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 NA #> 1136 TCGA-FF-A7CW-01 DLBC 8 0 NA 0 0 1 1 0 0 0 0 0 NA #> 1137 TCGA-FF-A7CX-01 DLBC 2 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1138 TCGA-FM-8000-01 DLBC 4 0 1 0 0 0 0 0 0 0 0 0 0 #> 1139 TCGA-G8-6325-01 DLBC 3 -1 NA 0 0 NA NA 0 0 0 0 1 NA #> 1140 TCGA-G8-6326-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1141 TCGA-G8-6906-01 DLBC 1 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1142 TCGA-G8-6907-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1143 TCGA-G8-6909-01 DLBC 3 0 0 NA 0 0 0 0 0 NA NA NA NA #> 1144 TCGA-G8-6914-01 DLBC 5 0 NA 0 0 1 1 0 0 0 0 0 0 #> 1145 TCGA-GR-7351-01 DLBC 1 0 0 NA NA 0 0 0 0 0 0 0 0 #> 1146 TCGA-GR-7353-01 DLBC 10 -1 1 0 0 0 0 0 -1 0 0 0 0 #> 1147 TCGA-GR-A4D4-01 DLBC 9 0 0 0 0 0 NA 0 0 0 0 0 0 #> 1148 TCGA-GR-A4D5-01 DLBC 5 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1149 TCGA-GR-A4D6-01 DLBC 8 0 NA 0 0 1 1 0 NA 0 0 0 0 #> 1150 TCGA-GR-A4D9-01 DLBC 3 0 1 0 0 0 0 0 0 0 0 0 NA #> 1151 TCGA-GS-A9TQ-01 DLBC 20 -1 1 0 NA -1 -1 -1 -1 0 0 1 -1 #> 1152 TCGA-GS-A9TT-01 DLBC 4 0 0 0 0 0 0 0 0 0 0 0 NA #> 1153 TCGA-GS-A9TU-01 DLBC 5 0 0 0 0 NA 1 0 0 0 NA 0 0 #> 1154 TCGA-GS-A9TV-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1155 TCGA-GS-A9TW-01 DLBC 16 0 0 0 0 NA 1 0 0 1 1 1 NA #> 1156 TCGA-GS-A9TX-01 DLBC 6 0 0 1 NA 1 1 0 0 0 NA 0 0 #> 1157 TCGA-GS-A9TY-01 DLBC 13 0 NA 1 NA 0 NA 0 NA 1 1 NA -1 #> 1158 TCGA-GS-A9TZ-01 DLBC 15 0 0 1 NA -1 -1 0 0 1 1 0 0 #> 1159 TCGA-GS-A9U3-01 DLBC 6 0 NA 0 0 1 1 0 0 1 0 0 0 #> 1160 TCGA-GS-A9U4-01 DLBC 11 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1161 TCGA-RQ-A68N-01 DLBC 16 -1 -1 0 -1 1 1 0 0 0 0 0 -1 #> 1162 TCGA-RQ-A6JB-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1163 TCGA-RQ-AAAT-01 DLBC 13 0 -1 NA NA -1 -1 0 0 -1 -1 0 -1 #> 1164 TCGA-VB-A8QN-01 DLBC 1 0 1 0 0 0 0 0 0 0 0 0 NA #> 1165 TCGA-3G-AB0O-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1166 TCGA-3G-AB0Q-01 THYM 0 0 0 0 NA 0 0 0 0 0 0 0 0 #> 1167 TCGA-3G-AB0T-01 THYM 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1168 TCGA-3G-AB14-01 THYM 3 0 0 0 0 -1 NA 0 0 0 0 -1 -1 #> 1169 TCGA-3G-AB19-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1170 TCGA-3Q-A9WF-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1171 TCGA-3S-A8YW-01 THYM 21 -1 1 0 0 -1 -1 0 0 NA -1 -1 -1 #> 1172 TCGA-4V-A9QI-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1173 TCGA-4V-A9QJ-01 THYM 2 0 0 0 0 0 1 0 0 0 0 0 0 #> 1174 TCGA-4V-A9QL-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1175 TCGA-4V-A9QM-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1176 TCGA-4V-A9QN-01 THYM 10 -1 1 0 0 -1 0 0 0 1 1 -1 -1 #> 1177 TCGA-4V-A9QR-01 THYM 21 0 1 0 0 0 0 0 0 1 1 -1 -1 #> 1178 TCGA-4V-A9QS-01 THYM 33 -1 1 -1 -1 -1 -1 -1 1 1 NA -1 -1 #> 1179 TCGA-4V-A9QT-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1180 TCGA-4V-A9QU-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1181 TCGA-4V-A9QW-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1182 TCGA-4V-A9QX-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1183 TCGA-4X-A9FA-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1184 TCGA-4X-A9FD-01 THYM 22 -1 1 0 0 -1 0 -1 0 0 0 -1 -1 #> 1185 TCGA-5G-A9ZZ-01 THYM 6 0 1 0 0 0 0 0 0 0 0 -1 -1 #> 1186 TCGA-5K-AAAP-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1187 TCGA-5U-AB0D-01 THYM 22 -1 1 1 -1 0 0 0 0 1 0 -1 -1 #> 1188 TCGA-5U-AB0E-01 THYM 20 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1189 TCGA-5U-AB0F-01 THYM 2 0 0 0 0 0 0 0 0 0 0 -1 0 #> 1190 TCGA-5V-A9RR-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1191 TCGA-X7-A8D6-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1192 TCGA-X7-A8D7-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1193 TCGA-X7-A8D8-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1194 TCGA-X7-A8D9-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1195 TCGA-X7-A8DB-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1196 TCGA-X7-A8DC-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1197 TCGA-X7-A8DI-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1198 TCGA-X7-A8DJ-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1199 TCGA-X7-A8M0-01 THYM 2 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1200 TCGA-X7-A8M1-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1201 TCGA-X7-A8M3-01 THYM 39 -1 1 -1 -1 -1 1 -1 -1 1 1 -1 -1 #> 1202 TCGA-X7-A8M5-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1203 TCGA-X7-A8M6-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1204 TCGA-X7-A8M7-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1205 TCGA-X7-A8M8-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1206 TCGA-XM-A8R8-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1207 TCGA-XM-A8R9-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1208 TCGA-XM-A8RB-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1209 TCGA-XM-A8RC-01 THYM 30 NA 1 0 NA -1 -1 -1 -1 1 1 -1 -1 #> 1210 TCGA-XM-A8RF-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1211 TCGA-XM-A8RG-01 THYM 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 1212 TCGA-XM-A8RL-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1213 TCGA-XM-AAZ1-01 THYM 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1214 TCGA-XM-AAZ2-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1215 TCGA-XM-AAZ3-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1216 TCGA-XU-A92O-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1217 TCGA-XU-A92Q-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1218 TCGA-XU-A92R-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1219 TCGA-XU-A92T-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1220 TCGA-XU-A92U-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1221 TCGA-XU-A92V-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1222 TCGA-XU-A92W-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1223 TCGA-XU-A92X-01 THYM 23 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1224 TCGA-XU-A92Y-01 THYM 6 0 1 0 0 0 0 0 0 1 1 0 0 #> 1225 TCGA-XU-A92Z-01 THYM 0 0 0 0 0 0 0 0 0 0 0 NA 0 #> 1226 TCGA-XU-A930-01 THYM 24 -1 1 0 0 -1 -1 -1 -1 0 0 -1 -1 #> 1227 TCGA-XU-A931-01 THYM 12 0 1 0 0 0 0 0 0 1 1 -1 -1 #> 1228 TCGA-XU-A932-01 THYM 4 0 1 0 0 0 0 0 0 0 0 NA 0 #> 1229 TCGA-XU-A933-01 THYM 10 0 1 0 0 0 0 1 1 0 0 0 0 #> 1230 TCGA-XU-A936-01 THYM 21 0 1 0 0 0 0 0 0 1 1 -1 -1 #> 1231 TCGA-XU-AAXW-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1232 TCGA-XU-AAXX-01 THYM 0 0 NA 0 0 0 0 0 0 0 0 0 0 #> 1233 TCGA-XU-AAXY-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1234 TCGA-XU-AAXZ-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1235 TCGA-XU-AAY0-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1236 TCGA-XU-AAY1-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1237 TCGA-YT-A95D-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1238 TCGA-YT-A95E-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1239 TCGA-YT-A95G-01 THYM 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1240 TCGA-YT-A95H-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1241 TCGA-ZB-A961-01 THYM 7 0 1 0 0 0 0 0 0 0 0 NA 0 #> 1242 TCGA-ZB-A962-01 THYM 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1243 TCGA-ZB-A963-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1244 TCGA-ZB-A964-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1245 TCGA-ZB-A965-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1246 TCGA-ZB-A966-01 THYM 4 0 1 0 0 -1 1 0 0 0 0 0 0 #> 1247 TCGA-ZB-A969-01 THYM 4 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1248 TCGA-ZB-A96A-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1249 TCGA-ZB-A96B-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1250 TCGA-ZB-A96C-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1251 TCGA-ZB-A96D-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1252 TCGA-ZB-A96E-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1253 TCGA-ZB-A96F-01 THYM 16 0 1 0 0 0 0 0 0 0 0 -1 -1 #> 1254 TCGA-ZB-A96G-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1255 TCGA-ZB-A96H-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1256 TCGA-ZB-A96I-01 THYM 7 0 1 0 0 -1 0 0 0 0 0 0 NA #> 1257 TCGA-ZB-A96K-01 THYM 0 0 0 0 0 0 0 0 0 0 NA 0 0 #> 1258 TCGA-ZB-A96L-01 THYM 5 0 0 0 0 -1 1 0 0 0 0 0 0 #> 1259 TCGA-ZB-A96M-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1260 TCGA-ZB-A96O-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1261 TCGA-ZB-A96P-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1262 TCGA-ZB-A96Q-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1263 TCGA-ZB-A96R-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1264 TCGA-ZB-A96V-01 THYM 4 0 1 0 0 0 0 0 0 NA 0 0 0 #> 1265 TCGA-ZC-AAA7-01 THYM 11 0 1 0 0 0 1 0 0 0 0 -1 -1 #> 1266 TCGA-ZC-AAAA-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1267 TCGA-ZC-AAAF-01 THYM 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1268 TCGA-ZC-AAAH-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1269 TCGA-ZL-A9V6-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1270 TCGA-ZT-A8OM-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1271 TCGA-N5-A4RA-01 UCS 20 0 0 0 1 -1 1 -1 -1 NA NA 1 1 #> 1272 TCGA-N5-A4RD-01 UCS 5 NA 0 0 0 -1 NA NA 0 0 0 NA 0 #> 1273 TCGA-N5-A4RF-01 UCS 21 1 1 0 0 -1 -1 -1 -1 0 0 1 1 #> 1274 TCGA-N5-A4RJ-01 UCS 19 0 1 1 1 0 NA -1 -1 0 0 1 1 #> 1275 TCGA-N5-A4RM-01 UCS 8 0 0 0 0 NA 0 0 0 0 0 NA 0 #> 1276 TCGA-N5-A4RN-01 UCS 17 0 1 0 0 0 NA 0 NA 1 -1 1 1 #> 1277 TCGA-N5-A4RO-01 UCS 15 NA 0 0 0 NA 1 0 -1 0 0 0 0 #> 1278 TCGA-N5-A4RS-01 UCS 8 0 NA 1 1 NA 0 0 0 0 0 0 0 #> 1279 TCGA-N5-A4RT-01 UCS 20 0 1 NA 0 NA NA 1 NA NA -1 1 NA #> 1280 TCGA-N5-A4RU-01 UCS 15 0 NA 1 NA NA NA 0 NA 1 NA 1 NA #> 1281 TCGA-N5-A4RV-01 UCS 12 0 1 0 0 0 0 1 NA NA 0 1 1 #> 1282 TCGA-N5-A59E-01 UCS 19 NA 0 1 0 NA NA NA -1 1 NA NA NA #> 1283 TCGA-N5-A59F-01 UCS 25 0 0 1 NA NA -1 -1 -1 NA -1 0 -1 #> 1284 TCGA-N6-A4V9-01 UCS 14 NA NA 1 0 -1 0 0 0 0 0 0 0 #> 1285 TCGA-N6-A4VC-01 UCS 22 NA 1 1 1 -1 1 -1 NA -1 NA 1 NA #> 1286 TCGA-N6-A4VD-01 UCS 0 NA NA 0 0 0 0 0 0 0 NA 0 0 #> 1287 TCGA-N6-A4VE-01 UCS 17 -1 0 0 0 NA 1 -1 -1 0 0 1 0 #> 1288 TCGA-N6-A4VF-01 UCS 10 0 1 0 0 0 0 0 0 0 0 0 0 #> 1289 TCGA-N6-A4VG-01 UCS 25 0 1 0 0 NA 0 -1 0 1 NA 1 -1 #> 1290 TCGA-N7-A4Y0-01 UCS 8 0 0 0 0 0 0 0 0 0 1 1 1 #> 1291 TCGA-N7-A4Y5-01 UCS 21 0 -1 0 0 NA 1 -1 -1 1 -1 0 0 #> 1292 TCGA-N7-A4Y8-01 UCS 26 1 1 1 1 0 0 -1 -1 -1 -1 0 0 #> 1293 TCGA-N7-A59B-01 UCS 21 1 1 1 1 NA 1 1 NA 0 0 0 0 #> 1294 TCGA-N8-A4PI-01 UCS 11 0 0 NA -1 0 0 0 0 0 0 0 0 #> 1295 TCGA-N8-A4PL-01 UCS 22 NA 1 1 1 -1 NA 0 0 0 NA 1 -1 #> 1296 TCGA-N8-A4PM-01 UCS 12 0 0 0 0 NA -1 0 0 -1 NA 0 0 #> 1297 TCGA-N8-A4PN-01 UCS 18 0 1 0 0 1 1 0 0 0 0 1 NA #> 1298 TCGA-N8-A4PO-01 UCS 21 NA 0 NA 0 -1 NA -1 -1 1 -1 1 1 #> 1299 TCGA-N8-A4PP-01 UCS 16 NA NA 0 NA -1 1 0 NA 1 0 0 -1 #> 1300 TCGA-N8-A4PQ-01 UCS 21 -1 -1 NA 0 0 0 0 -1 1 NA -1 -1 #> 1301 TCGA-N8-A56S-01 UCS 26 0 0 1 1 0 1 0 -1 0 NA 1 1 #> 1302 TCGA-N9-A4PZ-01 UCS 20 -1 1 0 NA NA 1 1 -1 1 NA NA 1 #> 1303 TCGA-N9-A4Q1-01 UCS 21 NA 1 1 NA -1 1 1 -1 0 -1 1 1 #> 1304 TCGA-N9-A4Q3-01 UCS 17 1 1 1 NA NA 1 -1 -1 0 0 1 0 #> 1305 TCGA-N9-A4Q4-01 UCS 22 1 1 1 1 -1 0 0 -1 0 -1 NA 0 #> 1306 TCGA-N9-A4Q7-01 UCS 21 0 NA 0 0 NA 0 NA NA NA 0 1 1 #> 1307 TCGA-N9-A4Q8-01 UCS 18 1 1 0 0 NA NA 0 0 1 -1 1 0 #> 1308 TCGA-NA-A4QV-01 UCS 18 0 1 NA 1 NA 1 1 NA 0 0 -1 0 #> 1309 TCGA-NA-A4QW-01 UCS 19 0 NA 1 1 0 NA -1 NA 1 NA 1 1 #> 1310 TCGA-NA-A4QX-01 UCS 14 0 0 0 0 NA 1 0 -1 NA 0 0 0 #> 1311 TCGA-NA-A4QY-01 UCS 27 1 1 1 1 -1 -1 1 -1 0 0 0 -1 #> 1312 TCGA-NA-A4R0-01 UCS 22 1 NA 1 1 0 0 0 1 1 0 1 0 #> 1313 TCGA-NA-A4R1-01 UCS 16 0 0 0 0 NA NA -1 0 NA NA -1 0 #> 1314 TCGA-NA-A5I1-01 UCS 14 -1 -1 0 0 0 0 0 0 1 0 0 0 #> 1315 TCGA-ND-A4W6-01 UCS 21 0 -1 1 NA 0 -1 1 NA 1 -1 0 0 #> 1316 TCGA-ND-A4WA-01 UCS 27 -1 -1 0 0 0 1 -1 -1 -1 -1 0 0 #> 1317 TCGA-ND-A4WC-01 UCS 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1318 TCGA-ND-A4WF-01 UCS 14 0 0 0 NA NA NA -1 -1 0 NA NA NA #> 1319 TCGA-NF-A4WU-01 UCS 20 0 NA 1 1 -1 -1 0 0 0 -1 0 0 #> 1320 TCGA-NF-A4WX-01 UCS 27 -1 0 0 0 -1 1 1 -1 NA -1 1 -1 #> 1321 TCGA-NF-A4X2-01 UCS 11 NA 1 0 0 NA 0 0 NA 0 -1 1 0 #> 1322 TCGA-NF-A5CP-01 UCS 6 0 0 1 0 0 NA -1 0 1 0 0 0 #> 1323 TCGA-NG-A4VU-01 UCS 20 -1 1 1 NA -1 NA -1 -1 1 -1 NA NA #> 1324 TCGA-NG-A4VW-01 UCS 9 0 1 0 0 1 1 0 0 1 1 0 0 #> 1325 TCGA-QM-A5NM-01 UCS 21 -1 1 0 0 -1 0 -1 -1 0 0 -1 0 #> 1326 TCGA-QN-A5NN-01 UCS 24 -1 -1 0 0 1 1 NA 0 1 1 1 -1 #> 1327 TCGA-3Z-A93Z-01 KIRC 7 0 0 1 1 -1 NA 0 0 1 1 0 0 #> 1328 TCGA-6D-AA2E-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1329 TCGA-A3-3306-01 KIRC 9 0 0 0 0 -1 NA 0 0 0 0 -1 -1 #> 1330 TCGA-A3-3307-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1331 TCGA-A3-3308-01 KIRC 3 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1332 TCGA-A3-3311-01 KIRC 2 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1333 TCGA-A3-3313-01 KIRC 7 -1 0 0 0 0 0 0 0 0 0 NA -1 #> 1334 TCGA-A3-3316-01 KIRC 26 0 1 0 0 -1 0 -1 -1 1 1 -1 -1 #> 1335 TCGA-A3-3317-01 KIRC 8 0 0 0 0 -1 -1 0 0 0 NA NA -1 #> 1336 TCGA-A3-3319-01 KIRC 16 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1337 TCGA-A3-3320-01 KIRC 1 0 0 0 0 -1 0 0 NA 0 NA 0 NA #> 1338 TCGA-A3-3322-01 KIRC 7 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1339 TCGA-A3-3323-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1340 TCGA-A3-3324-01 KIRC 7 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1341 TCGA-A3-3325-01 KIRC 25 0 0 0 0 -1 1 0 0 1 1 0 NA #> 1342 TCGA-A3-3326-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1343 TCGA-A3-3331-01 KIRC 4 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1344 TCGA-A3-3335-01 KIRC 4 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1345 TCGA-A3-3343-01 KIRC 1 0 1 0 0 NA 0 0 0 0 0 0 0 #> 1346 TCGA-A3-3346-01 KIRC 15 0 0 0 0 -1 0 0 -1 0 0 -1 -1 #> 1347 TCGA-A3-3347-01 KIRC 12 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1348 TCGA-A3-3351-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1349 TCGA-A3-3352-01 KIRC 9 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1350 TCGA-A3-3357-01 KIRC 5 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1351 TCGA-A3-3358-01 KIRC 9 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1352 TCGA-A3-3359-01 KIRC 1 0 0 NA 0 -1 NA 0 0 0 NA 0 0 #> 1353 TCGA-A3-3363-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1354 TCGA-A3-3367-01 KIRC 1 0 0 0 0 -1 NA 0 NA 0 0 0 0 #> 1355 TCGA-A3-3370-01 KIRC 1 0 NA 0 0 -1 NA 0 0 0 NA 0 0 #> 1356 TCGA-A3-3372-01 KIRC 24 NA 1 1 1 -1 -1 0 0 1 1 0 0 #> 1357 TCGA-A3-3373-01 KIRC 4 -1 0 0 0 -1 0 0 NA 0 0 0 0 #> 1358 TCGA-A3-3374-01 KIRC 33 -1 -1 -1 -1 1 1 1 1 1 1 -1 -1 #> 1359 TCGA-A3-3376-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1360 TCGA-A3-3378-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1361 TCGA-A3-3380-01 KIRC 10 -1 -1 0 0 -1 -1 -1 -1 0 NA -1 -1 #> 1362 TCGA-A3-3382-01 KIRC 28 0 1 1 1 -1 -1 0 0 1 1 -1 -1 #> 1363 TCGA-A3-3383-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1364 TCGA-A3-3385-01 KIRC 7 0 0 0 0 0 0 -1 0 1 1 0 0 #> 1365 TCGA-A3-3387-01 KIRC 3 0 0 0 0 -1 1 0 0 0 NA 0 0 #> 1366 TCGA-A3-A6NI-01 KIRC 4 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1367 TCGA-A3-A6NJ-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1368 TCGA-A3-A6NL-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1369 TCGA-A3-A6NN-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1370 TCGA-A3-A8CQ-01 KIRC 5 0 0 1 1 -1 NA 0 0 0 0 0 NA #> 1371 TCGA-A3-A8OU-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1372 TCGA-A3-A8OV-01 KIRC 3 0 NA 0 0 -1 NA 0 0 0 0 0 0 #> 1373 TCGA-A3-A8OW-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1374 TCGA-A3-A8OX-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1375 TCGA-AK-3426-01 KIRC 7 0 0 0 0 NA 0 0 0 0 0 -1 -1 #> 1376 TCGA-AK-3427-01 KIRC 8 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 1377 TCGA-AK-3428-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1378 TCGA-AK-3430-01 KIRC 18 0 0 1 1 -1 0 1 1 1 1 -1 -1 #> 1379 TCGA-AK-3431-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1380 TCGA-AK-3433-01 KIRC 15 -1 -1 -1 -1 -1 -1 0 0 -1 NA -1 -1 #> 1381 TCGA-AK-3434-01 KIRC 6 0 0 0 0 -1 1 0 0 0 0 -1 -1 #> 1382 TCGA-AK-3436-01 KIRC 21 NA 0 0 0 -1 1 -1 -1 1 1 -1 -1 #> 1383 TCGA-AK-3440-01 KIRC 16 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1384 TCGA-AK-3443-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1385 TCGA-AK-3444-01 KIRC 4 0 0 1 1 NA 0 0 0 0 NA 0 0 #> 1386 TCGA-AK-3445-01 KIRC 11 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1387 TCGA-AK-3447-01 KIRC 7 -1 0 -1 -1 0 0 0 0 0 0 -1 -1 #> 1388 TCGA-AK-3450-01 KIRC 3 0 1 0 NA -1 0 0 0 0 0 0 0 #> 1389 TCGA-AK-3451-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1390 TCGA-AK-3453-01 KIRC 31 -1 -1 -1 -1 1 1 -1 -1 0 0 -1 -1 #> 1391 TCGA-AK-3454-01 KIRC 1 0 NA 0 0 -1 0 0 0 0 NA 0 NA #> 1392 TCGA-AK-3455-01 KIRC 3 0 1 0 0 -1 0 0 0 0 0 0 0 #> 1393 TCGA-AK-3456-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1394 TCGA-AK-3458-01 KIRC 10 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1395 TCGA-AK-3460-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1396 TCGA-AK-3465-01 KIRC 13 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1397 TCGA-AS-3777-01 KIRC 14 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1398 TCGA-AS-3778-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1399 TCGA-B0-4688-01 KIRC 12 0 0 0 0 0 0 1 NA 0 0 NA 0 #> 1400 TCGA-B0-4690-01 KIRC 11 NA 0 1 NA 0 0 0 0 0 0 0 NA #> 1401 TCGA-B0-4691-01 KIRC 8 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1402 TCGA-B0-4693-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1403 TCGA-B0-4694-01 KIRC 5 0 0 0 0 -1 NA 0 0 0 0 -1 -1 #> 1404 TCGA-B0-4696-01 KIRC 13 0 NA NA -1 -1 NA 0 NA NA 0 NA -1 #> 1405 TCGA-B0-4698-01 KIRC 16 NA -1 0 0 0 0 0 NA 1 0 NA -1 #> 1406 TCGA-B0-4699-01 KIRC 15 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1407 TCGA-B0-4700-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1408 TCGA-B0-4701-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1409 TCGA-B0-4703-01 KIRC 5 0 0 0 NA -1 0 0 0 1 1 0 0 #> 1410 TCGA-B0-4706-01 KIRC 1 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1411 TCGA-B0-4707-01 KIRC 29 0 0 1 NA -1 0 -1 -1 1 1 -1 -1 #> 1412 TCGA-B0-4710-01 KIRC 20 0 0 1 1 -1 0 -1 -1 1 1 0 0 #> 1413 TCGA-B0-4712-01 KIRC 30 0 0 0 0 -1 1 -1 -1 1 1 -1 -1 #> 1414 TCGA-B0-4713-01 KIRC 7 NA 1 0 0 -1 1 0 0 0 NA 0 0 #> 1415 TCGA-B0-4714-01 KIRC 3 0 0 0 0 NA 0 0 0 0 1 0 0 #> 1416 TCGA-B0-4718-01 KIRC 2 NA 0 0 0 NA 0 0 0 0 0 0 0 #> 1417 TCGA-B0-4810-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 NA 0 NA #> 1418 TCGA-B0-4811-01 KIRC 26 0 0 1 1 -1 -1 -1 -1 1 1 1 1 #> 1419 TCGA-B0-4813-01 KIRC 6 0 0 1 NA -1 NA 1 NA 0 0 -1 NA #> 1420 TCGA-B0-4814-01 KIRC 5 0 0 0 0 NA 0 -1 -1 1 1 0 0 #> 1421 TCGA-B0-4815-01 KIRC 15 0 0 0 0 -1 -1 0 NA 1 0 0 0 #> 1422 TCGA-B0-4816-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1423 TCGA-B0-4817-01 KIRC 5 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1424 TCGA-B0-4818-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1425 TCGA-B0-4819-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1426 TCGA-B0-4821-01 KIRC 9 0 0 1 NA -1 0 0 0 1 NA 0 0 #> 1427 TCGA-B0-4822-01 KIRC 26 -1 NA 0 0 -1 -1 -1 -1 1 1 -1 -1 #> 1428 TCGA-B0-4823-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1429 TCGA-B0-4824-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1430 TCGA-B0-4827-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1431 TCGA-B0-4828-01 KIRC 6 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1432 TCGA-B0-4833-01 KIRC 5 0 0 0 0 -1 1 0 0 1 1 0 0 #> 1433 TCGA-B0-4834-01 KIRC 3 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 1434 TCGA-B0-4836-01 KIRC 14 0 0 0 0 -1 -1 0 NA 1 1 -1 -1 #> 1435 TCGA-B0-4837-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 0 0 NA #> 1436 TCGA-B0-4838-01 KIRC 11 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1437 TCGA-B0-4839-01 KIRC 8 0 0 0 0 0 0 0 0 1 1 0 0 #> 1438 TCGA-B0-4841-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1439 TCGA-B0-4842-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1440 TCGA-B0-4843-01 KIRC 2 NA 0 0 0 -1 0 0 0 0 0 0 0 #> 1441 TCGA-B0-4844-01 KIRC 17 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1442 TCGA-B0-4845-01 KIRC 13 -1 -1 0 0 -1 NA -1 -1 0 0 0 0 #> 1443 TCGA-B0-4846-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1444 TCGA-B0-4847-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1445 TCGA-B0-4848-01 KIRC 4 0 1 0 0 -1 NA 0 0 0 0 0 NA #> 1446 TCGA-B0-4849-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 -1 #> 1447 TCGA-B0-4852-01 KIRC 3 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1448 TCGA-B0-4945-01 KIRC 4 NA 0 0 0 -1 0 0 0 0 NA 0 0 #> 1449 TCGA-B0-5075-01 KIRC 6 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1450 TCGA-B0-5077-01 KIRC 7 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1451 TCGA-B0-5080-01 KIRC 2 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1452 TCGA-B0-5081-01 KIRC 2 0 0 0 0 NA 0 0 0 NA NA 0 0 #> 1453 TCGA-B0-5084-01 KIRC 11 -1 NA 0 0 0 NA -1 -1 0 0 -1 -1 #> 1454 TCGA-B0-5085-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1455 TCGA-B0-5088-01 KIRC 1 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1456 TCGA-B0-5092-01 KIRC 3 0 1 0 0 -1 0 0 0 0 NA 0 0 #> 1457 TCGA-B0-5094-01 KIRC 14 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1458 TCGA-B0-5095-01 KIRC 5 0 0 0 NA -1 0 0 0 1 1 0 0 #> 1459 TCGA-B0-5096-01 KIRC 7 0 1 0 0 -1 0 0 0 0 0 0 0 #> 1460 TCGA-B0-5097-01 KIRC 7 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1461 TCGA-B0-5098-01 KIRC 6 -1 0 0 0 -1 NA -1 -1 0 0 0 0 #> 1462 TCGA-B0-5099-01 KIRC 3 0 0 1 NA -1 NA 0 0 0 NA 0 0 #> 1463 TCGA-B0-5100-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1464 TCGA-B0-5102-01 KIRC 17 -1 -1 0 0 -1 1 0 0 1 1 0 NA #> 1465 TCGA-B0-5104-01 KIRC 1 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1466 TCGA-B0-5106-01 KIRC 8 0 0 0 0 0 0 0 0 1 1 0 0 #> 1467 TCGA-B0-5107-01 KIRC 6 0 0 0 0 NA 0 0 0 -1 NA 0 0 #> 1468 TCGA-B0-5108-01 KIRC 5 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1469 TCGA-B0-5109-01 KIRC 26 -1 1 1 NA -1 NA NA -1 1 1 -1 -1 #> 1470 TCGA-B0-5110-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1471 TCGA-B0-5113-01 KIRC 27 0 0 1 1 -1 0 -1 -1 1 1 1 1 #> 1472 TCGA-B0-5115-01 KIRC 2 0 NA 0 0 NA 0 0 0 1 1 0 0 #> 1473 TCGA-B0-5116-01 KIRC 14 0 0 0 NA -1 NA -1 -1 0 0 0 0 #> 1474 TCGA-B0-5117-01 KIRC 11 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1475 TCGA-B0-5119-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1476 TCGA-B0-5120-01 KIRC 2 0 0 0 NA -1 -1 0 0 0 NA 0 0 #> 1477 TCGA-B0-5121-01 KIRC 1 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1478 TCGA-B0-5400-01 KIRC 4 0 0 0 0 0 0 0 0 0 NA 0 0 #> 1479 TCGA-B0-5402-01 KIRC 6 NA 0 0 0 -1 0 0 0 0 NA 0 NA #> 1480 TCGA-B0-5690-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1481 TCGA-B0-5691-01 KIRC 0 0 0 0 0 NA 0 0 NA 0 NA 0 0 #> 1482 TCGA-B0-5692-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1483 TCGA-B0-5693-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1484 TCGA-B0-5694-01 KIRC 5 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1485 TCGA-B0-5695-01 KIRC 2 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1486 TCGA-B0-5696-01 KIRC 6 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1487 TCGA-B0-5697-01 KIRC 7 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1488 TCGA-B0-5698-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1489 TCGA-B0-5699-01 KIRC 1 0 0 0 0 -1 0 0 NA 0 0 0 0 #> 1490 TCGA-B0-5701-01 KIRC 7 NA NA 0 0 -1 0 0 NA 0 NA 0 0 #> 1491 TCGA-B0-5703-01 KIRC 5 -1 NA 0 0 -1 NA 0 0 0 0 0 0 #> 1492 TCGA-B0-5705-01 KIRC 2 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1493 TCGA-B0-5709-01 KIRC 1 NA 0 0 0 -1 0 0 NA 0 NA 0 0 #> 1494 TCGA-B0-5710-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1495 TCGA-B0-5711-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1496 TCGA-B0-5712-01 KIRC 4 0 0 0 0 0 0 0 0 1 1 0 0 #> 1497 TCGA-B0-5713-01 KIRC 5 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1498 TCGA-B0-5812-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1499 TCGA-B2-3923-01 KIRC 10 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1500 TCGA-B2-3924-01 KIRC 5 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1501 TCGA-B2-4098-01 KIRC 4 -1 0 0 0 0 0 0 0 0 0 0 0 #> 1502 TCGA-B2-4099-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1503 TCGA-B2-4101-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1504 TCGA-B2-4102-01 KIRC 1 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1505 TCGA-B2-5633-01 KIRC 7 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1506 TCGA-B2-5635-01 KIRC 3 0 0 0 0 0 0 0 0 1 1 0 0 #> 1507 TCGA-B2-5639-01 KIRC 5 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1508 TCGA-B2-5641-01 KIRC 3 0 0 0 NA -1 NA 0 0 0 NA 0 NA #> 1509 TCGA-B2-A4SR-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1510 TCGA-B4-5377-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1511 TCGA-B4-5378-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1512 TCGA-B4-5832-01 KIRC 29 NA 0 1 1 -1 NA 0 0 0 NA -1 -1 #> 1513 TCGA-B4-5834-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1514 TCGA-B4-5835-01 KIRC 12 -1 0 0 0 -1 0 -1 0 0 0 0 -1 #> 1515 TCGA-B4-5836-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1516 TCGA-B4-5838-01 KIRC 24 0 0 1 1 NA 1 0 0 1 1 0 0 #> 1517 TCGA-B4-5843-01 KIRC 7 0 1 1 1 -1 0 0 0 0 0 0 0 #> 1518 TCGA-B4-5844-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1519 TCGA-B8-4143-01 KIRC 12 NA 0 0 0 NA 1 -1 -1 -1 NA NA -1 #> 1520 TCGA-B8-4146-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1521 TCGA-B8-4148-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1522 TCGA-B8-4151-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1523 TCGA-B8-4153-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1524 TCGA-B8-4154-01 KIRC 1 0 0 0 0 NA 0 -1 0 0 0 0 0 #> 1525 TCGA-B8-4619-01 KIRC 6 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 1526 TCGA-B8-4620-01 KIRC 19 0 0 1 NA -1 NA 0 0 1 1 -1 -1 #> 1527 TCGA-B8-4621-01 KIRC 12 0 0 0 0 0 NA 0 0 0 0 0 0 #> 1528 TCGA-B8-4622-01 KIRC 8 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1529 TCGA-B8-5158-01 KIRC 10 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1530 TCGA-B8-5159-01 KIRC 5 0 0 1 1 -1 0 0 0 1 1 0 0 #> 1531 TCGA-B8-5162-01 KIRC 4 NA 0 0 0 -1 NA -1 -1 0 0 0 0 #> 1532 TCGA-B8-5163-01 KIRC 14 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1533 TCGA-B8-5164-01 KIRC 4 NA 0 0 0 -1 NA 0 0 0 0 0 0 #> 1534 TCGA-B8-5165-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1535 TCGA-B8-5545-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1536 TCGA-B8-5546-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1537 TCGA-B8-5549-01 KIRC 25 0 0 1 NA -1 NA 0 0 1 1 1 1 #> 1538 TCGA-B8-5550-01 KIRC 11 NA 0 1 1 NA 0 0 0 1 1 0 0 #> 1539 TCGA-B8-5551-01 KIRC 32 NA 1 1 1 -1 1 -1 -1 1 1 0 0 #> 1540 TCGA-B8-5552-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1541 TCGA-B8-5553-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1542 TCGA-B8-A54D-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1543 TCGA-B8-A54E-01 KIRC 5 0 0 0 0 0 0 0 0 0 0 0 0 #> 1544 TCGA-B8-A54F-01 KIRC 4 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1545 TCGA-B8-A54G-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 NA 0 NA #> 1546 TCGA-B8-A54H-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1547 TCGA-B8-A54I-01 KIRC 19 0 0 1 1 -1 1 0 0 1 1 NA 0 #> 1548 TCGA-B8-A54J-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1549 TCGA-B8-A7U6-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1550 TCGA-B8-A8YJ-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1551 TCGA-BP-4158-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1552 TCGA-BP-4159-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1553 TCGA-BP-4160-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1554 TCGA-BP-4161-01 KIRC 1 0 1 0 NA NA 0 0 0 0 0 0 0 #> 1555 TCGA-BP-4162-01 KIRC 10 0 0 1 1 NA 0 0 0 1 1 0 0 #> 1556 TCGA-BP-4163-01 KIRC 7 0 0 0 0 -1 1 0 0 0 0 0 0 #> 1557 TCGA-BP-4164-01 KIRC 15 0 0 0 0 -1 0 -1 -1 0 0 -1 -1 #> 1558 TCGA-BP-4165-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1559 TCGA-BP-4166-01 KIRC 24 0 0 1 NA -1 -1 1 1 1 1 0 0 #> 1560 TCGA-BP-4167-01 KIRC 7 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1561 TCGA-BP-4169-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1562 TCGA-BP-4170-01 KIRC 3 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1563 TCGA-BP-4174-01 KIRC 17 0 1 1 1 -1 0 0 0 1 1 0 0 #> 1564 TCGA-BP-4176-01 KIRC 19 -1 1 0 0 -1 NA 0 0 1 1 -1 -1 #> 1565 TCGA-BP-4177-01 KIRC 7 0 0 0 0 0 0 0 0 1 1 0 0 #> 1566 TCGA-BP-4325-01 KIRC 5 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1567 TCGA-BP-4326-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1568 TCGA-BP-4327-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1569 TCGA-BP-4329-01 KIRC 2 0 NA 0 0 -1 NA 0 0 0 0 0 0 #> 1570 TCGA-BP-4330-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1571 TCGA-BP-4332-01 KIRC 4 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1572 TCGA-BP-4334-01 KIRC 12 -1 -1 -1 -1 NA 0 0 0 0 0 -1 -1 #> 1573 TCGA-BP-4335-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1574 TCGA-BP-4337-01 KIRC 18 0 0 1 1 NA 1 0 0 1 NA 0 0 #> 1575 TCGA-BP-4340-01 KIRC 6 NA 0 1 1 -1 0 0 0 0 0 0 0 #> 1576 TCGA-BP-4341-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1577 TCGA-BP-4343-01 KIRC 21 NA 0 0 0 -1 0 -1 -1 1 1 0 0 #> 1578 TCGA-BP-4346-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 NA #> 1579 TCGA-BP-4347-01 KIRC 9 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1580 TCGA-BP-4349-01 KIRC 0 0 0 0 NA NA 0 0 0 0 0 0 0 #> 1581 TCGA-BP-4351-01 KIRC 27 0 0 1 1 -1 1 -1 -1 1 1 0 0 #> 1582 TCGA-BP-4352-01 KIRC 26 NA NA -1 -1 -1 NA 0 0 1 1 -1 -1 #> 1583 TCGA-BP-4354-01 KIRC 6 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1584 TCGA-BP-4355-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1585 TCGA-BP-4756-01 KIRC 9 NA 1 1 1 0 0 0 0 0 0 0 0 #> 1586 TCGA-BP-4758-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1587 TCGA-BP-4760-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1588 TCGA-BP-4761-01 KIRC 12 0 0 0 NA -1 1 0 0 1 0 -1 -1 #> 1589 TCGA-BP-4762-01 KIRC 1 0 0 0 0 NA 0 -1 0 0 NA 0 0 #> 1590 TCGA-BP-4763-01 KIRC 10 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1591 TCGA-BP-4765-01 KIRC 2 0 NA 0 0 -1 0 0 0 0 0 0 0 #> 1592 TCGA-BP-4766-01 KIRC 4 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1593 TCGA-BP-4768-01 KIRC 24 0 NA 1 1 -1 NA 0 0 1 NA 0 0 #> 1594 TCGA-BP-4770-01 KIRC 14 0 0 0 -1 0 NA -1 -1 1 NA -1 -1 #> 1595 TCGA-BP-4774-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1596 TCGA-BP-4775-01 KIRC 15 -1 -1 1 1 NA 0 0 0 0 NA -1 -1 #> 1597 TCGA-BP-4776-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1598 TCGA-BP-4777-01 KIRC 3 0 0 0 0 -1 -1 0 0 0 NA 0 NA #> 1599 TCGA-BP-4782-01 KIRC 5 0 0 0 0 NA 0 0 NA 0 0 0 0 #> 1600 TCGA-BP-4787-01 KIRC 18 0 0 0 0 NA 0 1 -1 1 1 0 0 #> 1601 TCGA-BP-4789-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1602 TCGA-BP-4790-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1603 TCGA-BP-4795-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1604 TCGA-BP-4797-01 KIRC 16 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1605 TCGA-BP-4798-01 KIRC 13 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1606 TCGA-BP-4799-01 KIRC 28 -1 -1 0 0 -1 -1 -1 -1 0 0 0 0 #> 1607 TCGA-BP-4801-01 KIRC 2 0 0 0 0 -1 -1 0 0 0 NA 0 0 #> 1608 TCGA-BP-4803-01 KIRC 4 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1609 TCGA-BP-4807-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1610 TCGA-BP-4959-01 KIRC 5 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1611 TCGA-BP-4960-01 KIRC 13 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1612 TCGA-BP-4961-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1613 TCGA-BP-4962-01 KIRC 6 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1614 TCGA-BP-4963-01 KIRC 8 0 NA 0 0 -1 0 0 0 0 NA 0 -1 #> 1615 TCGA-BP-4964-01 KIRC 0 0 0 0 0 NA NA 0 0 0 0 0 0 #> 1616 TCGA-BP-4965-01 KIRC 2 NA 0 0 0 -1 0 0 0 0 NA 0 0 #> 1617 TCGA-BP-4967-01 KIRC 11 0 0 0 0 0 0 0 0 1 1 0 0 #> 1618 TCGA-BP-4968-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1619 TCGA-BP-4969-01 KIRC 26 -1 -1 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1620 TCGA-BP-4970-01 KIRC 2 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1621 TCGA-BP-4971-01 KIRC 6 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1622 TCGA-BP-4972-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1623 TCGA-BP-4973-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1624 TCGA-BP-4974-01 KIRC 2 0 0 0 0 -1 0 -1 NA 0 NA 0 0 #> 1625 TCGA-BP-4975-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1626 TCGA-BP-4977-01 KIRC 12 0 0 0 0 -1 0 1 1 0 NA 0 0 #> 1627 TCGA-BP-4981-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1628 TCGA-BP-4982-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1629 TCGA-BP-4983-01 KIRC 5 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1630 TCGA-BP-4985-01 KIRC 26 0 0 1 1 -1 NA NA 0 1 1 NA 1 #> 1631 TCGA-BP-4987-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1632 TCGA-BP-4989-01 KIRC 10 NA 0 1 NA -1 0 1 1 1 NA 0 0 #> 1633 TCGA-BP-4991-01 KIRC 2 0 0 0 NA -1 NA 0 1 0 0 0 0 #> 1634 TCGA-BP-4992-01 KIRC 16 0 0 0 0 -1 -1 0 0 1 1 -1 -1 #> 1635 TCGA-BP-4993-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 NA #> 1636 TCGA-BP-4994-01 KIRC 18 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1637 TCGA-BP-4998-01 KIRC 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 1638 TCGA-BP-4999-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1639 TCGA-BP-5000-01 KIRC 10 0 0 0 0 -1 0 0 0 0 0 0 NA #> 1640 TCGA-BP-5001-01 KIRC 1 0 0 0 NA NA 0 0 0 0 0 0 0 #> 1641 TCGA-BP-5004-01 KIRC 7 -1 0 0 0 -1 0 0 0 1 NA 0 0 #> 1642 TCGA-BP-5007-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1643 TCGA-BP-5008-01 KIRC 2 0 0 0 NA -1 -1 0 0 0 NA 0 0 #> 1644 TCGA-BP-5010-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1645 TCGA-BP-5168-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1646 TCGA-BP-5169-01 KIRC 9 0 0 0 0 -1 1 0 0 0 0 0 -1 #> 1647 TCGA-BP-5170-01 KIRC 3 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1648 TCGA-BP-5173-01 KIRC 30 -1 1 1 1 -1 -1 -1 -1 1 1 0 0 #> 1649 TCGA-BP-5174-01 KIRC 2 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1650 TCGA-BP-5175-01 KIRC 23 NA 1 -1 -1 NA 1 0 0 1 1 -1 -1 #> 1651 TCGA-BP-5176-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1652 TCGA-BP-5177-01 KIRC 5 0 0 0 NA NA 0 0 1 0 1 1 0 #> 1653 TCGA-BP-5178-01 KIRC 21 0 0 1 1 -1 0 0 0 0 NA -1 -1 #> 1654 TCGA-BP-5180-01 KIRC 7 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1655 TCGA-BP-5182-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1656 TCGA-BP-5183-01 KIRC 6 0 0 0 0 -1 0 -1 -1 0 NA 0 0 #> 1657 TCGA-BP-5184-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1658 TCGA-BP-5185-01 KIRC 23 0 0 1 1 -1 -1 0 0 1 1 -1 -1 #> 1659 TCGA-BP-5186-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1660 TCGA-BP-5187-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1661 TCGA-BP-5189-01 KIRC 4 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1662 TCGA-BP-5190-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1663 TCGA-BP-5191-01 KIRC 17 0 0 0 0 NA 0 0 0 1 1 -1 -1 #> 1664 TCGA-BP-5192-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1665 TCGA-BP-5194-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1666 TCGA-BP-5195-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1667 TCGA-BP-5196-01 KIRC 14 0 0 0 NA -1 0 -1 -1 0 0 0 0 #> 1668 TCGA-BP-5198-01 KIRC 20 0 0 0 0 -1 1 -1 -1 0 0 0 0 #> 1669 TCGA-BP-5200-01 KIRC 27 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1670 TCGA-BP-5201-01 KIRC 8 0 0 0 0 -1 0 NA 0 0 NA -1 -1 #> 1671 TCGA-BP-5202-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1672 TCGA-CJ-4634-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1673 TCGA-CJ-4635-01 KIRC 23 -1 1 0 0 -1 -1 0 0 1 1 -1 -1 #> 1674 TCGA-CJ-4636-01 KIRC 12 0 0 0 0 -1 0 0 NA 1 1 0 0 #> 1675 TCGA-CJ-4637-01 KIRC 3 0 NA 0 0 -1 0 0 0 0 NA 0 0 #> 1676 TCGA-CJ-4638-01 KIRC 4 0 NA 0 0 NA 0 0 0 0 NA 0 0 #> 1677 TCGA-CJ-4639-01 KIRC 2 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1678 TCGA-CJ-4640-01 KIRC 8 -1 1 0 0 -1 1 0 0 0 0 0 NA #> 1679 TCGA-CJ-4643-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1680 TCGA-CJ-4644-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1681 TCGA-CJ-4868-01 KIRC 2 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1682 TCGA-CJ-4869-01 KIRC 2 NA 0 0 0 -1 0 0 0 0 0 0 0 #> 1683 TCGA-CJ-4871-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1684 TCGA-CJ-4873-01 KIRC 20 0 NA 0 0 -1 NA 0 0 1 1 0 0 #> 1685 TCGA-CJ-4874-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1686 TCGA-CJ-4875-01 KIRC 10 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1687 TCGA-CJ-4876-01 KIRC 9 -1 1 1 1 -1 0 0 0 0 NA 0 NA #> 1688 TCGA-CJ-4878-01 KIRC 3 0 NA 0 0 -1 NA -1 0 0 0 0 NA #> 1689 TCGA-CJ-4881-01 KIRC 13 0 1 0 0 -1 0 0 0 1 0 0 0 #> 1690 TCGA-CJ-4882-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1691 TCGA-CJ-4884-01 KIRC 4 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1692 TCGA-CJ-4885-01 KIRC 11 0 0 0 0 NA 0 0 0 1 1 1 1 #> 1693 TCGA-CJ-4886-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1694 TCGA-CJ-4887-01 KIRC 6 0 0 0 0 -1 0 0 0 1 1 0 -1 #> 1695 TCGA-CJ-4891-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1696 TCGA-CJ-4892-01 KIRC 3 0 0 0 0 -1 NA 0 0 1 1 0 NA #> 1697 TCGA-CJ-4893-01 KIRC 7 0 0 1 1 -1 0 0 0 0 NA 0 -1 #> 1698 TCGA-CJ-4894-01 KIRC 4 NA 0 0 0 -1 0 -1 0 0 0 0 0 #> 1699 TCGA-CJ-4895-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 NA #> 1700 TCGA-CJ-4897-01 KIRC 34 -1 -1 1 1 NA 1 -1 -1 1 1 -1 -1 #> 1701 TCGA-CJ-4899-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1702 TCGA-CJ-4900-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1703 TCGA-CJ-4901-01 KIRC 33 -1 -1 1 1 -1 1 -1 -1 -1 NA -1 -1 #> 1704 TCGA-CJ-4902-01 KIRC 1 0 0 0 NA -1 0 0 0 0 NA 0 0 #> 1705 TCGA-CJ-4903-01 KIRC 1 NA 0 0 0 -1 NA 0 0 0 0 0 0 #> 1706 TCGA-CJ-4904-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1707 TCGA-CJ-4905-01 KIRC 3 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1708 TCGA-CJ-4907-01 KIRC 1 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1709 TCGA-CJ-4908-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1710 TCGA-CJ-4912-01 KIRC 9 0 0 0 0 0 0 0 0 1 1 0 0 #> 1711 TCGA-CJ-4913-01 KIRC 1 0 0 0 0 NA 0 -1 NA 0 NA 0 0 #> 1712 TCGA-CJ-4916-01 KIRC 3 0 1 0 0 -1 0 0 0 0 NA 0 0 #> 1713 TCGA-CJ-4918-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1714 TCGA-CJ-4920-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1715 TCGA-CJ-4923-01 KIRC 1 0 1 0 0 NA 0 0 0 0 NA 0 0 #> 1716 TCGA-CJ-5671-01 KIRC 24 0 0 1 1 -1 1 0 0 1 1 1 1 #> 1717 TCGA-CJ-5672-01 KIRC 7 0 0 1 1 -1 0 0 0 0 NA 0 0 #> 1718 TCGA-CJ-5675-01 KIRC 4 0 1 0 0 -1 0 0 0 0 NA 0 -1 #> 1719 TCGA-CJ-5676-01 KIRC 7 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1720 TCGA-CJ-5677-01 KIRC 7 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1721 TCGA-CJ-5678-01 KIRC 4 -1 1 0 0 -1 0 0 0 0 NA 0 0 #> 1722 TCGA-CJ-5679-01 KIRC 25 -1 1 0 0 -1 -1 -1 -1 1 1 -1 -1 #> 1723 TCGA-CJ-5680-01 KIRC 3 0 0 0 0 NA 0 0 0 0 0 0 NA #> 1724 TCGA-CJ-5681-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1725 TCGA-CJ-5682-01 KIRC 23 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1726 TCGA-CJ-5683-01 KIRC 6 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1727 TCGA-CJ-5684-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1728 TCGA-CJ-5686-01 KIRC 4 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1729 TCGA-CJ-5689-01 KIRC 6 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1730 TCGA-CJ-6027-01 KIRC 10 NA 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1731 TCGA-CJ-6028-01 KIRC 36 -1 -1 1 1 -1 0 -1 -1 1 1 -1 -1 #> 1732 TCGA-CJ-6030-01 KIRC 7 NA 0 0 0 -1 0 -1 0 0 0 0 0 #> 1733 TCGA-CJ-6031-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1734 TCGA-CJ-6032-01 KIRC 6 0 NA 1 1 -1 0 0 0 0 0 0 -1 #> 1735 TCGA-CJ-6033-01 KIRC 5 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1736 TCGA-CW-5580-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1737 TCGA-CW-5581-01 KIRC 2 0 0 0 0 NA 0 NA 0 0 NA 0 0 #> 1738 TCGA-CW-5583-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1739 TCGA-CW-5584-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 NA #> 1740 TCGA-CW-5585-01 KIRC 4 0 NA 0 0 NA 0 0 0 0 NA 0 -1 #> 1741 TCGA-CW-5587-01 KIRC 7 0 1 1 1 -1 0 0 0 1 1 0 0 #> 1742 TCGA-CW-5588-01 KIRC 23 -1 -1 0 0 NA 0 -1 -1 1 1 -1 -1 #> 1743 TCGA-CW-5591-01 KIRC 26 -1 -1 1 1 -1 0 -1 -1 0 NA -1 -1 #> 1744 TCGA-CW-6088-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1745 TCGA-CW-6090-01 KIRC 13 -1 1 0 NA -1 -1 -1 -1 0 0 0 0 #> 1746 TCGA-CW-6093-01 KIRC 2 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1747 TCGA-CW-6097-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1748 TCGA-CZ-4853-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1749 TCGA-CZ-4854-01 KIRC 32 -1 NA 0 0 -1 -1 -1 -1 1 1 -1 -1 #> 1750 TCGA-CZ-4856-01 KIRC 3 0 0 0 0 -1 0 0 NA 0 NA 0 0 #> 1751 TCGA-CZ-4857-01 KIRC 12 NA 0 0 0 -1 0 0 0 0 NA 0 0 #> 1752 TCGA-CZ-4858-01 KIRC 24 NA 1 1 0 -1 1 -1 -1 0 NA -1 -1 #> 1753 TCGA-CZ-4859-01 KIRC 4 0 NA 1 NA -1 0 0 0 0 0 0 NA #> 1754 TCGA-CZ-4860-01 KIRC 23 0 0 1 1 -1 1 -1 -1 0 NA 0 0 #> 1755 TCGA-CZ-4861-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1756 TCGA-CZ-4862-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1757 TCGA-CZ-4863-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1758 TCGA-CZ-4864-01 KIRC 5 NA 0 0 0 -1 -1 0 0 1 1 0 NA #> 1759 TCGA-CZ-4866-01 KIRC 29 0 0 0 0 NA 0 0 0 1 1 0 -1 #> 1760 TCGA-CZ-5451-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1761 TCGA-CZ-5452-01 KIRC 5 0 0 0 0 -1 -1 0 0 0 0 NA -1 #> 1762 TCGA-CZ-5453-01 KIRC 3 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1763 TCGA-CZ-5454-01 KIRC 4 0 NA 0 0 NA 0 0 0 0 NA 0 0 #> 1764 TCGA-CZ-5455-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1765 TCGA-CZ-5456-01 KIRC 31 -1 -1 0 0 NA 0 -1 -1 -1 NA -1 -1 #> 1766 TCGA-CZ-5457-01 KIRC 28 -1 -1 1 1 -1 -1 -1 -1 1 1 0 0 #> 1767 TCGA-CZ-5458-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1768 TCGA-CZ-5459-01 KIRC 2 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1769 TCGA-CZ-5460-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1770 TCGA-CZ-5461-01 KIRC 23 0 0 1 1 -1 -1 -1 -1 1 1 0 0 #> 1771 TCGA-CZ-5462-01 KIRC 6 -1 0 0 0 -1 NA 0 0 0 NA 0 NA #> 1772 TCGA-CZ-5463-01 KIRC 7 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1773 TCGA-CZ-5464-01 KIRC 15 0 0 0 0 -1 1 0 NA 1 1 0 0 #> 1774 TCGA-CZ-5465-01 KIRC 29 NA 1 1 1 -1 1 -1 -1 1 1 -1 -1 #> 1775 TCGA-CZ-5466-01 KIRC 11 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1776 TCGA-CZ-5467-01 KIRC 4 0 0 0 0 NA NA 0 0 0 NA 0 0 #> 1777 TCGA-CZ-5468-01 KIRC 21 0 0 0 NA -1 NA 0 0 1 1 -1 NA #> 1778 TCGA-CZ-5469-01 KIRC 31 -1 -1 1 1 -1 NA -1 -1 -1 NA 0 0 #> 1779 TCGA-CZ-5470-01 KIRC 5 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1780 TCGA-CZ-5982-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1781 TCGA-CZ-5984-01 KIRC 22 0 0 1 0 -1 1 0 0 1 1 -1 -1 #> 1782 TCGA-CZ-5985-01 KIRC 6 0 0 0 NA -1 NA 0 0 0 NA 0 NA #> 1783 TCGA-CZ-5986-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1784 TCGA-CZ-5987-01 KIRC 9 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1785 TCGA-CZ-5988-01 KIRC 6 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1786 TCGA-CZ-5989-01 KIRC 3 0 0 0 NA -1 NA 0 0 0 NA 0 0 #> 1787 TCGA-DV-5565-01 KIRC 7 0 0 0 0 -1 NA 0 0 0 0 0 -1 #> 1788 TCGA-DV-5566-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1789 TCGA-DV-5567-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1790 TCGA-DV-5569-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1791 TCGA-DV-5575-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1792 TCGA-DV-5576-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1793 TCGA-DV-A4VX-01 KIRC 18 0 0 1 1 -1 1 0 0 0 1 0 0 #> 1794 TCGA-DV-A4VZ-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1795 TCGA-DV-A4W0-01 KIRC 6 0 0 0 NA -1 0 0 0 0 1 0 0 #> 1796 TCGA-EU-5904-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1797 TCGA-EU-5905-01 KIRC 25 -1 -1 0 0 -1 NA -1 -1 1 1 -1 -1 #> 1798 TCGA-EU-5906-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1799 TCGA-EU-5907-01 KIRC 7 -1 0 0 0 -1 NA -1 -1 1 NA -1 -1 #> 1800 TCGA-G6-A5PC-01 KIRC 2 0 1 0 0 NA 0 0 0 0 NA 0 0 #> 1801 TCGA-G6-A8L6-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1802 TCGA-G6-A8L7-01 KIRC 10 0 0 0 0 NA 0 -1 0 0 0 -1 -1 #> 1803 TCGA-G6-A8L8-01 KIRC 6 -1 NA 0 0 -1 0 0 0 0 0 0 -1 #> 1804 TCGA-GK-A6C7-01 KIRC 3 NA 0 0 0 -1 NA 0 0 1 1 0 0 #> 1805 TCGA-MM-A563-01 KIRC 8 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1806 TCGA-MM-A564-01 KIRC 9 0 1 0 0 -1 -1 0 0 1 1 0 0 #> 1807 TCGA-MM-A84U-01 KIRC 5 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1808 TCGA-MW-A4EC-01 KIRC 4 0 0 0 0 -1 NA 0 0 1 1 0 -1 #> 1809 TCGA-T7-A92I-01 KIRC 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 1810 TCGA-3H-AB3K-01 MESO 4 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 1811 TCGA-3H-AB3L-01 MESO 11 0 0 0 NA 0 0 -1 -1 0 NA 0 -1 #> 1812 TCGA-3H-AB3M-01 MESO 6 -1 0 0 NA NA 0 NA -1 0 0 0 -1 #> 1813 TCGA-3H-AB3S-01 MESO 3 NA 0 0 0 NA 0 0 0 0 0 0 0 #> 1814 TCGA-3H-AB3T-01 MESO 9 NA 0 0 0 0 0 0 -1 0 0 NA NA #> 1815 TCGA-3H-AB3U-01 MESO 19 -1 1 0 0 0 0 -1 -1 0 NA -1 -1 #> 1816 TCGA-3H-AB3X-01 MESO 6 NA 1 0 0 0 0 -1 NA 0 0 0 0 #> 1817 TCGA-3U-A98D-01 MESO 11 NA 0 -1 0 0 -1 -1 -1 0 NA 0 -1 #> 1818 TCGA-3U-A98E-01 MESO 4 0 0 0 0 0 0 0 0 1 1 1 -1 #> 1819 TCGA-3U-A98F-01 MESO 28 -1 1 1 1 -1 -1 -1 -1 0 0 1 NA #> 1820 TCGA-3U-A98G-01 MESO 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1821 TCGA-3U-A98H-01 MESO 3 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1822 TCGA-3U-A98I-01 MESO 9 0 0 0 0 NA -1 -1 -1 NA 0 0 -1 #> 1823 TCGA-3U-A98J-01 MESO 7 NA 1 -1 0 0 0 NA 0 0 0 0 NA #> 1824 TCGA-LK-A4NW-01 MESO 11 0 0 0 0 0 0 0 0 1 0 0 0 #> 1825 TCGA-LK-A4NY-01 MESO 2 NA 0 0 NA 0 0 0 0 0 0 0 NA #> 1826 TCGA-LK-A4NZ-01 MESO 4 0 1 0 0 NA 0 0 0 0 0 0 -1 #> 1827 TCGA-LK-A4O0-01 MESO 17 NA NA 1 1 1 1 0 0 1 1 0 0 #> 1828 TCGA-LK-A4O2-01 MESO 10 NA 0 NA -1 NA 1 0 NA 1 0 0 -1 #> 1829 TCGA-LK-A4O4-01 MESO 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1830 TCGA-LK-A4O5-01 MESO 3 NA 0 0 NA NA 0 0 0 0 0 0 0 #> 1831 TCGA-LK-A4O6-01 MESO 9 -1 1 0 0 NA 1 -1 -1 0 0 0 0 #> 1832 TCGA-LK-A4O7-01 MESO 10 -1 1 0 0 -1 -1 -1 -1 1 NA -1 0 #> 1833 TCGA-MQ-A4KX-01 MESO 3 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1834 TCGA-MQ-A4LC-01 MESO 2 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 1835 TCGA-MQ-A4LI-01 MESO 12 -1 1 0 0 0 0 -1 -1 0 0 0 0 #> 1836 TCGA-MQ-A4LJ-01 MESO 5 NA 1 NA 0 0 0 0 0 0 0 0 0 #> 1837 TCGA-MQ-A4LM-01 MESO 9 NA 0 0 0 NA NA -1 -1 0 0 0 -1 #> 1838 TCGA-MQ-A4LP-01 MESO 8 NA 0 NA 0 -1 0 -1 -1 1 0 0 0 #> 1839 TCGA-MQ-A4LV-01 MESO 3 0 0 0 0 NA 0 NA NA 0 0 0 0 #> 1840 TCGA-MQ-A6BL-01 MESO 6 -1 0 NA 0 NA 0 0 -1 0 0 0 -1 #> 1841 TCGA-MQ-A6BQ-01 MESO 5 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1842 TCGA-MQ-A6BR-01 MESO 5 0 0 0 0 0 0 -1 -1 1 1 0 0 #> 1843 TCGA-MQ-A6BS-01 MESO 21 -1 0 1 1 NA 0 -1 0 0 NA 1 -1 #> 1844 TCGA-NQ-A57I-01 MESO 17 0 0 0 0 -1 -1 1 1 0 0 -1 -1 #> 1845 TCGA-NQ-A638-01 MESO 15 NA 0 0 0 0 0 -1 NA 1 0 -1 -1 #> 1846 TCGA-SC-A6LM-01 MESO 3 NA NA 0 0 NA 0 NA 0 0 NA 0 0 #> 1847 TCGA-SC-A6LN-01 MESO 9 -1 1 0 0 0 0 -1 -1 NA NA 0 0 #> 1848 TCGA-SC-A6LP-01 MESO 3 0 0 0 0 0 0 0 0 1 1 0 0 #> 1849 TCGA-SC-A6LQ-01 MESO 4 0 0 0 NA 0 0 0 0 0 0 0 0 #> 1850 TCGA-SC-A6LR-01 MESO 25 -1 0 -1 -1 NA NA -1 -1 NA 0 1 -1 #> 1851 TCGA-SC-AA5Z-01 MESO 31 -1 -1 -1 -1 NA 1 -1 -1 0 0 0 0 #> 1852 TCGA-SH-A7BC-01 MESO 11 NA NA 0 0 NA 0 -1 -1 0 0 NA -1 #> 1853 TCGA-SH-A7BD-01 MESO 1 NA 0 0 0 NA 0 0 0 0 NA 0 NA #> 1854 TCGA-SH-A7BH-01 MESO 30 NA 1 -1 -1 1 1 -1 -1 1 1 0 0 #> 1855 TCGA-SH-A9CT-01 MESO 8 NA 1 0 0 0 1 0 NA 0 0 0 0 #> 1856 TCGA-SH-A9CU-01 MESO 24 NA 0 -1 1 1 NA NA -1 1 NA 1 NA #> 1857 TCGA-TS-A7OU-01 MESO 2 0 0 0 1 NA 0 0 0 0 0 0 0 #> 1858 TCGA-TS-A7OY-01 MESO 4 0 0 0 0 0 0 0 -1 0 0 0 0 #> 1859 TCGA-TS-A7OZ-01 MESO 5 NA 0 0 0 NA 0 0 -1 0 0 0 0 #> 1860 TCGA-TS-A7P0-01 MESO 16 NA 0 0 0 0 0 -1 -1 NA NA NA -1 #> 1861 TCGA-TS-A7P1-01 MESO 5 NA 0 0 0 0 0 0 NA 1 NA 0 0 #> 1862 TCGA-TS-A7P3-01 MESO 2 NA 0 0 0 NA 0 0 0 0 0 0 0 #> 1863 TCGA-TS-A7P6-01 MESO 8 NA NA -1 -1 0 0 NA -1 NA 0 -1 -1 #> 1864 TCGA-TS-A7P8-01 MESO 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1865 TCGA-TS-A7PB-01 MESO 1 NA 0 0 0 NA 0 0 0 0 0 0 -1 #> 1866 TCGA-TS-A8AI-01 MESO 4 NA 0 NA 0 NA 0 -1 -1 0 NA 0 0 #> 1867 TCGA-TS-A8AS-01 MESO 3 0 0 0 0 0 1 0 0 0 0 0 -1 #> 1868 TCGA-TS-A8AY-01 MESO 7 NA NA NA 0 0 0 0 -1 0 0 NA -1 #> 1869 TCGA-UD-AABZ-01 MESO 9 0 1 0 0 NA 0 0 -1 1 NA 0 NA #> 1870 TCGA-UD-AAC1-01 MESO 4 0 0 0 0 0 0 0 0 1 1 0 0 #> 1871 TCGA-UD-AAC4-01 MESO 3 NA 0 0 0 NA 0 0 0 0 0 NA 0 #> 1872 TCGA-UD-AAC5-01 MESO 11 NA 1 0 0 NA 0 -1 -1 0 0 0 -1 #> 1873 TCGA-UD-AAC6-01 MESO 10 NA 0 0 0 NA 1 -1 0 0 0 1 -1 #> 1874 TCGA-UD-AAC7-01 MESO 7 NA 0 0 0 NA 0 -1 -1 0 0 0 -1 #> 1875 TCGA-UT-A88C-01 MESO 10 0 0 0 0 NA 1 0 0 0 0 0 0 #> 1876 TCGA-UT-A88D-01 MESO 1 NA 0 0 0 0 0 0 0 0 0 0 0 #> 1877 TCGA-UT-A88E-01 MESO 6 NA 0 0 0 NA 0 -1 0 0 0 0 NA #> 1878 TCGA-UT-A88G-01 MESO 28 0 0 -1 0 1 1 -1 -1 0 NA -1 -1 #> 1879 TCGA-UT-A97Y-01 MESO 6 NA 0 0 0 0 0 -1 -1 0 0 0 0 #> 1880 TCGA-XT-AASU-01 MESO 3 NA 0 0 0 NA 0 0 0 0 NA 0 NA #> 1881 TCGA-YS-A95B-01 MESO 6 NA 1 0 0 0 0 0 0 0 0 0 0 #> 1882 TCGA-YS-A95C-01 MESO 8 NA 0 0 0 0 0 0 0 1 1 0 0 #> 1883 TCGA-YS-AA4M-01 MESO 3 0 NA 0 0 0 0 0 0 0 0 0 0 #> 1884 TCGA-ZN-A9VO-01 MESO 7 0 0 0 0 NA 0 0 0 NA 0 0 -1 #> 1885 TCGA-ZN-A9VP-01 MESO 12 NA 0 0 0 -1 0 0 0 1 0 0 0 #> 1886 TCGA-ZN-A9VQ-01 MESO 4 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1887 TCGA-ZN-A9VS-01 MESO 9 0 0 0 0 NA 0 -1 -1 0 0 0 -1 #> 1888 TCGA-ZN-A9VU-01 MESO 5 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1889 TCGA-ZN-A9VV-01 MESO 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1890 TCGA-ZN-A9VW-01 MESO 5 0 NA 0 0 0 0 0 0 NA 0 0 0 #> 1891 TCGA-2J-AAB1-01 PAAD 2 NA 0 0 0 0 0 0 0 0 0 -1 -1 #> 1892 TCGA-2J-AAB4-01 PAAD 6 0 NA NA 0 0 0 0 0 0 0 NA 0 #> 1893 TCGA-2J-AAB6-01 PAAD 13 1 1 0 0 1 1 1 0 0 0 0 0 #> 1894 TCGA-2J-AAB8-01 PAAD 9 -1 NA 0 0 -1 NA -1 0 0 0 0 0 #> 1895 TCGA-2J-AAB9-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1896 TCGA-2J-AABA-01 PAAD 6 NA 0 0 0 0 0 0 0 0 0 NA -1 #> 1897 TCGA-2J-AABE-01 PAAD 5 NA 1 0 1 0 0 0 0 0 0 0 -1 #> 1898 TCGA-2J-AABF-01 PAAD 9 NA 1 0 NA NA 0 0 0 0 0 0 0 #> 1899 TCGA-2J-AABH-01 PAAD 11 -1 1 0 0 0 0 0 0 0 0 NA -1 #> 1900 TCGA-2J-AABI-01 PAAD 13 -1 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1901 TCGA-2J-AABO-01 PAAD 22 -1 0 0 1 -1 NA -1 -1 -1 -1 -1 -1 #> 1902 TCGA-2J-AABP-01 PAAD 18 0 -1 -1 NA 0 -1 1 NA 1 -1 NA 0 #> 1903 TCGA-2J-AABT-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 0 0 #> 1904 TCGA-2J-AABU-01 PAAD 8 0 0 NA 0 -1 0 0 0 NA 0 -1 -1 #> 1905 TCGA-2J-AABV-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1906 TCGA-2L-AAQA-01 PAAD 5 -1 1 0 0 0 0 0 NA 0 0 NA -1 #> 1907 TCGA-2L-AAQE-01 PAAD 27 0 0 1 1 1 1 0 0 1 1 -1 -1 #> 1908 TCGA-2L-AAQI-01 PAAD 9 -1 0 0 0 0 0 0 0 -1 NA NA -1 #> 1909 TCGA-2L-AAQJ-01 PAAD 6 -1 0 0 0 -1 0 0 0 0 0 0 0 #> 1910 TCGA-2L-AAQL-01 PAAD 21 -1 1 0 0 -1 0 -1 -1 -1 -1 -1 -1 #> 1911 TCGA-2L-AAQM-01 PAAD 38 -1 -1 -1 NA -1 -1 1 1 1 1 -1 -1 #> 1912 TCGA-3A-A9I5-01 PAAD 4 -1 1 0 0 -1 0 NA NA 0 0 0 0 #> 1913 TCGA-3A-A9I7-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1914 TCGA-3A-A9I9-01 PAAD 5 0 0 NA 0 0 0 0 NA 0 NA 0 -1 #> 1915 TCGA-3A-A9IB-01 PAAD 10 0 0 0 0 NA 1 -1 NA 0 0 0 0 #> 1916 TCGA-3A-A9IC-01 PAAD 12 0 1 0 0 -1 0 -1 0 0 NA 0 0 #> 1917 TCGA-3A-A9IH-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1918 TCGA-3A-A9IJ-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1919 TCGA-3A-A9IL-01 PAAD 24 -1 -1 -1 NA 0 0 0 0 1 1 -1 -1 #> 1920 TCGA-3A-A9IN-01 PAAD 18 0 0 0 0 0 0 1 1 1 1 0 0 #> 1921 TCGA-3A-A9IO-01 PAAD 20 0 0 0 0 -1 -1 0 0 1 1 1 1 #> 1922 TCGA-3A-A9IR-01 PAAD 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1923 TCGA-3A-A9IS-01 PAAD 24 -1 -1 -1 NA 0 -1 1 1 1 1 -1 -1 #> 1924 TCGA-3A-A9IU-01 PAAD 9 0 1 0 0 0 0 0 0 0 0 0 -1 #> 1925 TCGA-3A-A9IV-01 PAAD 32 -1 -1 -1 NA -1 -1 1 1 1 0 -1 -1 #> 1926 TCGA-3A-A9IX-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1927 TCGA-3A-A9IZ-01 PAAD 6 0 NA 0 0 0 NA 0 0 0 NA 0 -1 #> 1928 TCGA-3A-A9J0-01 PAAD 24 0 NA 1 1 1 1 0 0 0 0 0 0 #> 1929 TCGA-3E-AAAZ-01 PAAD 9 -1 1 0 0 0 0 -1 -1 0 0 -1 -1 #> 1930 TCGA-F2-6879-01 PAAD 9 0 0 0 0 0 0 0 0 0 0 NA -1 #> 1931 TCGA-F2-6880-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1932 TCGA-F2-7273-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1933 TCGA-F2-7276-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1934 TCGA-F2-A44G-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 1935 TCGA-F2-A44H-01 PAAD 10 NA 1 0 0 -1 0 0 0 0 0 0 -1 #> 1936 TCGA-F2-A7TX-01 PAAD 9 0 0 0 0 NA NA 0 0 0 0 -1 0 #> 1937 TCGA-F2-A8YN-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 NA NA #> 1938 TCGA-FB-A4P5-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1939 TCGA-FB-A545-01 PAAD 25 0 0 1 1 0 0 0 0 -1 -1 NA -1 #> 1940 TCGA-FB-A5VM-01 PAAD 8 0 0 0 0 NA 1 0 NA 1 -1 0 0 #> 1941 TCGA-FB-A78T-01 PAAD 8 -1 1 0 0 0 0 0 0 0 0 0 0 #> 1942 TCGA-FB-A7DR-01 PAAD 15 0 1 0 1 NA 1 0 0 1 NA NA 0 #> 1943 TCGA-FB-AAPP-01 PAAD 19 -1 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1944 TCGA-FB-AAPQ-01 PAAD 5 -1 NA NA NA -1 0 0 0 0 0 NA 0 #> 1945 TCGA-FB-AAPS-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1946 TCGA-FB-AAPU-01 PAAD 4 NA 1 0 NA 0 0 0 0 0 NA 0 0 #> 1947 TCGA-FB-AAPY-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 1948 TCGA-FB-AAPZ-01 PAAD 21 0 0 1 1 NA 1 0 0 1 NA 1 -1 #> 1949 TCGA-FB-AAQ0-01 PAAD 6 0 0 0 0 0 0 0 0 0 0 0 0 #> 1950 TCGA-FB-AAQ1-01 PAAD 26 1 1 -1 0 -1 1 -1 NA 1 1 0 -1 #> 1951 TCGA-FB-AAQ2-01 PAAD 16 0 0 0 0 0 0 -1 -1 0 0 -1 -1 #> 1952 TCGA-FB-AAQ3-01 PAAD 4 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 1953 TCGA-FB-AAQ6-01 PAAD 7 -1 1 0 0 -1 0 0 0 0 0 0 -1 #> 1954 TCGA-FZ-5919-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1955 TCGA-FZ-5920-01 PAAD 19 -1 1 0 0 0 -1 -1 -1 0 0 -1 -1 #> 1956 TCGA-FZ-5921-01 PAAD 13 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1957 TCGA-FZ-5922-01 PAAD 3 NA 0 0 0 NA 0 0 0 0 0 0 -1 #> 1958 TCGA-FZ-5923-01 PAAD 3 NA NA 0 0 0 0 0 0 0 0 0 0 #> 1959 TCGA-FZ-5924-01 PAAD 33 -1 1 1 1 -1 1 1 1 1 NA 0 -1 #> 1960 TCGA-FZ-5926-01 PAAD 16 0 0 NA 0 0 0 0 0 -1 -1 0 0 #> 1961 TCGA-H6-8124-01 PAAD 11 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1962 TCGA-H6-A45N-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1963 TCGA-H8-A6C1-01 PAAD 6 0 1 NA 0 NA NA NA NA 0 0 NA 0 #> 1964 TCGA-HV-A5A3-01 PAAD 11 0 1 0 NA 0 1 0 0 0 0 NA -1 #> 1965 TCGA-HV-A5A4-01 PAAD 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 1966 TCGA-HV-A5A6-01 PAAD 17 0 0 0 0 0 0 0 -1 1 -1 -1 0 #> 1967 TCGA-HV-A7OL-01 PAAD 7 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1968 TCGA-HV-A7OP-01 PAAD 18 -1 1 0 0 0 0 -1 -1 1 -1 0 0 #> 1969 TCGA-HV-AA8X-01 PAAD 6 0 1 0 NA -1 0 0 0 0 0 0 -1 #> 1970 TCGA-HZ-7289-01 PAAD 20 -1 0 -1 NA 0 0 0 0 1 -1 -1 -1 #> 1971 TCGA-HZ-7918-01 PAAD 6 NA 0 0 NA 0 NA -1 NA 0 NA NA NA #> 1972 TCGA-HZ-7919-01 PAAD 7 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1973 TCGA-HZ-7920-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1974 TCGA-HZ-7922-01 PAAD 25 0 0 0 0 -1 1 1 -1 1 -1 -1 -1 #> 1975 TCGA-HZ-7924-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1976 TCGA-HZ-7925-01 PAAD 9 0 0 0 0 -1 -1 -1 -1 0 0 NA -1 #> 1977 TCGA-HZ-8002-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1978 TCGA-HZ-8005-01 PAAD 22 -1 -1 0 0 -1 1 0 0 0 0 1 -1 #> 1979 TCGA-HZ-8315-01 PAAD 5 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1980 TCGA-HZ-8317-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1981 TCGA-HZ-8519-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1982 TCGA-HZ-8636-01 PAAD 10 0 NA 0 0 0 0 NA 0 0 0 0 0 #> 1983 TCGA-HZ-8637-01 PAAD 8 0 1 0 NA -1 0 0 -1 0 NA 0 0 #> 1984 TCGA-HZ-8638-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1985 TCGA-HZ-A49G-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1986 TCGA-HZ-A49H-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1987 TCGA-HZ-A49I-01 PAAD 5 0 0 -1 0 0 0 NA 0 0 0 NA 0 #> 1988 TCGA-HZ-A4BH-01 PAAD 7 0 NA 0 0 0 0 0 -1 0 0 0 0 #> 1989 TCGA-HZ-A4BK-01 PAAD 23 1 1 1 1 -1 1 0 0 0 1 -1 1 #> 1990 TCGA-HZ-A77O-01 PAAD 32 -1 1 1 1 0 0 1 1 -1 NA NA -1 #> 1991 TCGA-HZ-A77P-01 PAAD 4 0 0 NA 1 0 0 0 0 0 0 0 0 #> 1992 TCGA-HZ-A77Q-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 NA -1 #> 1993 TCGA-HZ-A8P0-01 PAAD 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 1994 TCGA-HZ-A8P1-01 PAAD 6 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 1995 TCGA-HZ-A9TJ-01 PAAD 19 1 1 1 1 1 NA NA 0 0 0 1 1 #> 1996 TCGA-HZ-A9TJ-06 PAAD 17 NA 1 1 1 0 1 -1 -1 -1 -1 0 0 #> 1997 TCGA-IB-7644-01 PAAD 6 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1998 TCGA-IB-7645-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1999 TCGA-IB-7646-01 PAAD 24 -1 1 -1 1 NA 1 0 0 0 0 -1 -1 #> 2000 TCGA-IB-7647-01 PAAD 9 0 0 0 0 -1 0 0 0 0 0 NA -1 #> 2001 TCGA-IB-7649-01 PAAD 12 -1 NA 0 0 0 0 0 0 0 0 0 0 #> 2002 TCGA-IB-7651-01 PAAD 2 0 0 1 1 0 0 0 0 0 0 0 0 #> 2003 TCGA-IB-7652-01 PAAD 6 0 0 -1 NA NA 0 0 NA 0 NA 0 0 #> 2004 TCGA-IB-7885-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 0 -1 #> 2005 TCGA-IB-7886-01 PAAD 20 -1 0 0 0 -1 -1 -1 -1 0 0 -1 -1 #> 2006 TCGA-IB-7887-01 PAAD 8 0 0 NA 0 -1 NA -1 0 0 0 NA -1 #> 2007 TCGA-IB-7888-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2008 TCGA-IB-7889-01 PAAD 5 0 1 0 0 0 0 NA 0 0 0 0 0 #> 2009 TCGA-IB-7890-01 PAAD 19 -1 -1 NA 0 -1 1 0 0 0 0 -1 -1 #> 2010 TCGA-IB-7891-01 PAAD 4 0 0 1 1 0 0 0 0 0 0 0 0 #> 2011 TCGA-IB-7893-01 PAAD 26 0 1 1 1 1 1 0 0 0 NA -1 -1 #> 2012 TCGA-IB-7897-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2013 TCGA-IB-8126-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2014 TCGA-IB-8127-01 PAAD 26 -1 1 1 1 0 0 0 1 -1 NA NA NA #> 2015 TCGA-IB-A5SO-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2016 TCGA-IB-A5SP-01 PAAD 11 0 0 0 0 0 0 -1 -1 0 0 -1 -1 #> 2017 TCGA-IB-A5SQ-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2018 TCGA-IB-A5SS-01 PAAD 7 NA 0 0 0 0 0 0 0 0 0 -1 -1 #> 2019 TCGA-IB-A5ST-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2020 TCGA-IB-A6UF-01 PAAD 13 0 1 0 0 0 0 0 0 0 0 -1 -1 #> 2021 TCGA-IB-A6UG-01 PAAD 21 -1 1 0 0 1 1 NA 0 1 -1 -1 -1 #> 2022 TCGA-IB-A7LX-01 PAAD 13 -1 0 0 0 -1 -1 NA 0 0 -1 0 -1 #> 2023 TCGA-IB-A7M4-01 PAAD 7 0 0 0 0 0 0 0 0 0 0 0 0 #> 2024 TCGA-IB-AAUM-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2025 TCGA-IB-AAUN-01 PAAD 9 -1 0 0 0 0 0 0 0 0 0 NA -1 #> 2026 TCGA-IB-AAUO-01 PAAD 8 0 0 0 0 NA 1 -1 -1 0 0 -1 -1 #> 2027 TCGA-IB-AAUP-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2028 TCGA-IB-AAUQ-01 PAAD 8 0 0 0 0 0 0 -1 -1 0 0 0 0 #> 2029 TCGA-IB-AAUR-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2030 TCGA-IB-AAUS-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2031 TCGA-IB-AAUT-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2032 TCGA-IB-AAUU-01 PAAD 23 0 1 1 1 NA 0 1 0 NA 0 -1 0 #> 2033 TCGA-LB-A7SX-01 PAAD 14 0 0 0 0 -1 0 0 0 0 -1 -1 -1 #> 2034 TCGA-LB-A8F3-01 PAAD 23 -1 1 0 0 -1 -1 0 0 0 0 1 1 #> 2035 TCGA-M8-A5N4-01 PAAD 22 1 1 NA NA NA 1 0 0 1 NA NA NA #> 2036 TCGA-OE-A75W-01 PAAD 8 NA 0 NA 0 0 0 0 -1 0 0 0 -1 #> 2037 TCGA-PZ-A5RE-01 PAAD 9 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 2038 TCGA-Q3-A5QY-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2039 TCGA-Q3-AA2A-01 PAAD 4 NA 0 0 0 0 0 0 0 0 0 NA 0 #> 2040 TCGA-RB-A7B8-01 PAAD 5 NA 1 0 0 0 1 0 0 0 0 0 0 #> 2041 TCGA-S4-A8RM-01 PAAD 7 -1 1 0 0 0 0 0 0 0 0 NA -1 #> 2042 TCGA-S4-A8RO-01 PAAD 6 -1 NA NA NA 0 0 0 0 0 0 0 0 #> 2043 TCGA-S4-A8RP-01 PAAD 5 NA 1 0 0 0 0 0 0 NA NA 0 -1 #> 2044 TCGA-US-A774-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2045 TCGA-US-A776-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 2046 TCGA-US-A779-01 PAAD 6 0 0 0 0 0 0 0 0 -1 -1 -1 -1 #> 2047 TCGA-US-A77E-01 PAAD 5 0 0 0 0 0 0 0 0 0 0 0 0 #> 2048 TCGA-US-A77G-01 PAAD 5 0 0 0 0 0 0 0 0 0 0 NA -1 #> 2049 TCGA-XD-AAUG-01 PAAD 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2050 TCGA-XD-AAUI-01 PAAD 7 0 NA 0 0 0 0 NA -1 -1 -1 0 0 #> 2051 TCGA-XD-AAUL-01 PAAD 4 0 0 0 0 0 0 0 0 0 NA 0 0 #> 2052 TCGA-XN-A8T3-01 PAAD 25 0 0 0 0 0 0 0 0 -1 -1 NA -1 #> 2053 TCGA-XN-A8T5-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2054 TCGA-YB-A89D-01 PAAD 21 0 0 1 1 0 0 1 1 0 0 -1 -1 #> 2055 TCGA-YH-A8SY-01 PAAD 7 0 0 NA 0 NA 0 0 0 NA 0 NA -1 #> 2056 TCGA-YY-A8LH-01 PAAD 8 -1 1 0 0 0 0 0 0 0 0 NA -1 #> 2057 TCGA-2W-A8YY-01 CESC 0 0 0 0 0 0 0 0 NA 0 NA 0 0 #> 2058 TCGA-4J-AA1J-01 CESC 6 0 0 0 0 NA 0 0 NA 1 -1 NA -1 #> 2059 TCGA-BI-A0VR-01 CESC 9 1 1 0 0 -1 1 -1 NA 0 0 1 0 #> 2060 TCGA-BI-A0VS-01 CESC 24 NA -1 0 NA -1 NA -1 -1 1 -1 0 -1 #> 2061 TCGA-BI-A20A-01 CESC 18 0 0 1 NA -1 1 0 NA 0 0 NA -1 #> 2062 TCGA-C5-A0TN-01 CESC 11 0 0 0 NA -1 NA -1 -1 1 -1 NA 0 #> 2063 TCGA-C5-A1BE-01 CESC 4 0 0 0 0 0 NA -1 0 NA NA 0 0 #> 2064 TCGA-C5-A1BF-01 CESC 4 NA 1 0 NA -1 0 0 0 0 NA 0 0 #> 2065 TCGA-C5-A1BI-01 CESC 3 0 0 0 NA -1 NA -1 0 0 0 0 -1 #> 2066 TCGA-C5-A1BJ-01 CESC 7 0 0 0 0 NA 1 -1 0 1 -1 0 0 #> 2067 TCGA-C5-A1BK-01 CESC 6 0 1 0 NA 0 1 -1 0 0 NA 0 0 #> 2068 TCGA-C5-A1BL-01 CESC 13 0 1 0 0 -1 1 -1 0 NA NA 0 -1 #> 2069 TCGA-C5-A1BM-01 CESC 9 1 1 0 0 -1 1 0 0 0 0 NA -1 #> 2070 TCGA-C5-A1BN-01 CESC 8 0 1 1 0 -1 0 -1 -1 0 -1 1 NA #> 2071 TCGA-C5-A1BQ-01 CESC 6 0 0 0 0 0 0 0 0 1 0 NA 0 #> 2072 TCGA-C5-A1M5-01 CESC 3 0 0 0 0 0 1 0 0 0 0 0 NA #> 2073 TCGA-C5-A1M6-01 CESC 23 0 0 1 0 -1 1 -1 -1 1 -1 0 0 #> 2074 TCGA-C5-A1M7-01 CESC 11 1 1 0 0 1 1 0 0 1 0 1 1 #> 2075 TCGA-C5-A1M8-01 CESC 8 0 0 0 -1 -1 NA 0 0 0 NA -1 -1 #> 2076 TCGA-C5-A1M9-01 CESC 14 0 0 0 0 0 0 0 0 -1 -1 0 0 #> 2077 TCGA-C5-A1ME-01 CESC 14 0 0 1 0 0 NA 0 0 1 0 0 0 #> 2078 TCGA-C5-A1MF-01 CESC 9 0 1 NA 0 NA 1 -1 0 0 0 0 0 #> 2079 TCGA-C5-A1MH-01 CESC 24 1 NA -1 -1 0 1 -1 -1 -1 -1 0 0 #> 2080 TCGA-C5-A1MI-01 CESC 25 -1 1 0 0 -1 0 -1 -1 -1 -1 1 1 #> 2081 TCGA-C5-A1MJ-01 CESC 21 NA 1 0 0 1 1 0 0 0 0 0 0 #> 2082 TCGA-C5-A1MK-01 CESC 9 1 1 0 0 0 1 NA 0 0 0 0 0 #> 2083 TCGA-C5-A1ML-01 CESC 22 1 1 0 0 -1 NA -1 -1 1 1 1 1 #> 2084 TCGA-C5-A1MN-01 CESC 16 0 0 0 0 -1 NA 0 NA 1 -1 0 0 #> 2085 TCGA-C5-A1MP-01 CESC 12 0 1 0 0 0 1 -1 1 1 0 0 0 #> 2086 TCGA-C5-A2LS-01 CESC 4 0 1 0 0 0 1 0 0 0 0 0 0 #> 2087 TCGA-C5-A2LT-01 CESC 27 -1 -1 1 -1 0 1 -1 -1 1 0 -1 -1 #> 2088 TCGA-C5-A2LV-01 CESC 14 0 NA 0 0 NA NA -1 -1 0 0 NA -1 #> 2089 TCGA-C5-A2LX-01 CESC 14 0 NA 0 0 NA 1 -1 -1 NA 0 0 0 #> 2090 TCGA-C5-A2LY-01 CESC 7 0 1 0 1 0 NA 0 0 0 0 NA 0 #> 2091 TCGA-C5-A2LZ-01 CESC 9 0 1 0 NA 0 1 -1 0 1 0 0 0 #> 2092 TCGA-C5-A2M1-01 CESC 5 0 0 0 0 0 0 0 0 1 0 0 0 #> 2093 TCGA-C5-A2M2-01 CESC 1 0 0 NA NA 0 NA 0 0 0 0 0 0 #> 2094 TCGA-C5-A3HD-01 CESC 1 0 0 0 NA 0 0 NA NA 1 NA NA NA #> 2095 TCGA-C5-A3HE-01 CESC 13 0 0 -1 -1 0 NA -1 -1 1 -1 0 0 #> 2096 TCGA-C5-A3HF-01 CESC 3 0 0 0 0 0 NA 0 0 0 0 1 -1 #> 2097 TCGA-C5-A3HL-01 CESC 0 0 NA 0 0 0 NA 0 0 0 0 0 0 #> 2098 TCGA-C5-A7CG-01 CESC 16 0 0 -1 -1 0 NA 0 0 0 0 NA NA #> 2099 TCGA-C5-A7CH-01 CESC 21 NA 1 -1 -1 -1 NA -1 -1 -1 -1 1 -1 #> 2100 TCGA-C5-A7CJ-01 CESC 4 1 1 0 0 -1 1 0 0 0 0 0 0 #> 2101 TCGA-C5-A7CK-01 CESC 9 0 1 0 0 NA 1 -1 NA 0 0 0 0 #> 2102 TCGA-C5-A7CL-01 CESC 9 0 1 0 0 -1 1 -1 -1 1 0 0 0 #> 2103 TCGA-C5-A7CM-01 CESC 11 0 0 0 0 0 NA -1 -1 1 0 0 0 #> 2104 TCGA-C5-A7CO-01 CESC 19 0 0 0 0 -1 NA -1 -1 1 1 -1 -1 #> 2105 TCGA-C5-A7UC-01 CESC 6 0 0 0 0 0 0 0 0 0 -1 0 0 #> 2106 TCGA-C5-A7UE-01 CESC 7 0 0 0 0 -1 1 0 0 1 NA 1 1 #> 2107 TCGA-C5-A7UH-01 CESC 23 -1 -1 1 NA NA NA -1 -1 1 0 1 -1 #> 2108 TCGA-C5-A7UI-01 CESC 9 NA 1 0 0 -1 1 -1 0 0 0 1 NA #> 2109 TCGA-C5-A7X3-01 CESC 20 -1 0 1 -1 0 0 -1 -1 1 -1 -1 -1 #> 2110 TCGA-C5-A7X5-01 CESC 16 NA 0 1 0 -1 1 0 -1 0 1 0 0 #> 2111 TCGA-C5-A7X8-01 CESC 29 1 1 1 1 -1 1 -1 -1 1 1 1 1 #> 2112 TCGA-C5-A7XC-01 CESC 7 NA 0 1 NA 0 1 0 1 0 1 0 -1 #> 2113 TCGA-C5-A8XH-01 CESC 10 NA 1 NA NA NA NA -1 NA 1 -1 NA NA #> 2114 TCGA-C5-A8XI-01 CESC 11 0 1 0 NA 1 1 1 1 0 0 0 0 #> 2115 TCGA-C5-A8XJ-01 CESC 7 0 0 0 0 -1 0 0 0 1 0 0 0 #> 2116 TCGA-C5-A8XK-01 CESC 5 0 0 0 NA 0 0 -1 NA 1 0 0 NA #> 2117 TCGA-C5-A8YQ-01 CESC 20 NA 1 1 0 -1 1 -1 0 0 0 -1 -1 #> 2118 TCGA-C5-A8YR-01 CESC 20 1 1 NA -1 0 0 0 -1 1 0 -1 -1 #> 2119 TCGA-C5-A8YT-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2120 TCGA-C5-A8ZZ-01 CESC 7 0 0 0 0 -1 1 -1 -1 0 0 0 0 #> 2121 TCGA-C5-A907-01 CESC 5 0 0 0 0 0 0 0 0 1 0 0 0 #> 2122 TCGA-DG-A2KH-01 CESC 19 NA 1 1 -1 1 1 0 0 1 1 -1 -1 #> 2123 TCGA-DG-A2KJ-01 CESC 12 NA 0 0 0 -1 1 -1 -1 0 0 NA NA #> 2124 TCGA-DG-A2KK-01 CESC 5 0 0 0 0 0 1 0 0 0 0 NA 0 #> 2125 TCGA-DG-A2KL-01 CESC 18 1 1 1 NA 0 1 0 0 1 1 NA -1 #> 2126 TCGA-DG-A2KM-01 CESC 12 -1 -1 0 0 -1 1 -1 -1 0 0 0 0 #> 2127 TCGA-DR-A0ZL-01 CESC 11 0 1 0 NA -1 1 -1 -1 0 -1 0 0 #> 2128 TCGA-DR-A0ZM-01 CESC 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 2129 TCGA-DS-A0VK-01 CESC 7 0 0 0 0 -1 1 -1 0 0 -1 NA 0 #> 2130 TCGA-DS-A0VL-01 CESC 3 0 0 0 NA 0 NA -1 0 0 0 0 0 #> 2131 TCGA-DS-A0VM-01 CESC 3 0 1 0 0 NA 1 0 NA NA -1 NA NA #> 2132 TCGA-DS-A0VN-01 CESC 18 NA -1 -1 -1 -1 1 -1 NA 0 0 0 0 #> 2133 TCGA-DS-A3LQ-01 CESC 22 -1 NA 0 NA -1 1 -1 -1 0 -1 -1 -1 #> 2134 TCGA-DS-A5RQ-01 CESC 3 0 0 0 0 -1 1 -1 NA 0 0 0 0 #> 2135 TCGA-DS-A7WF-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2136 TCGA-DS-A7WH-01 CESC 5 0 1 1 0 NA 1 0 0 0 0 NA 0 #> 2137 TCGA-DS-A7WI-01 CESC 5 NA 1 0 NA 0 1 0 0 0 0 0 0 #> 2138 TCGA-EA-A1QS-01 CESC 9 1 0 NA NA 0 1 NA 0 1 0 NA 1 #> 2139 TCGA-EA-A1QT-01 CESC 8 0 0 0 NA NA 1 0 0 0 -1 0 -1 #> 2140 TCGA-EA-A3HQ-01 CESC 10 1 1 0 0 0 1 0 0 0 0 0 0 #> 2141 TCGA-EA-A3HR-01 CESC 8 NA 0 0 -1 0 1 -1 0 1 0 0 0 #> 2142 TCGA-EA-A3HS-01 CESC 5 0 NA 0 0 -1 1 -1 NA 0 0 0 0 #> 2143 TCGA-EA-A3HT-01 CESC 4 1 1 0 0 0 1 0 NA 0 0 0 0 #> 2144 TCGA-EA-A3QD-01 CESC 5 0 0 0 0 -1 1 0 0 0 0 0 0 #> 2145 TCGA-EA-A3QE-01 CESC 4 NA 0 0 NA -1 0 0 NA 0 0 -1 -1 #> 2146 TCGA-EA-A3Y4-01 CESC 4 0 0 0 0 0 0 -1 0 1 0 0 0 #> 2147 TCGA-EA-A410-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2148 TCGA-EA-A411-01 CESC 21 1 1 1 -1 -1 1 -1 NA 0 -1 0 0 #> 2149 TCGA-EA-A439-01 CESC 23 0 0 0 0 -1 1 -1 -1 1 -1 0 NA #> 2150 TCGA-EA-A43B-01 CESC 21 0 0 1 NA 0 0 -1 -1 1 -1 1 -1 #> 2151 TCGA-EA-A44S-01 CESC 8 0 0 0 -1 -1 NA -1 0 0 0 -1 -1 #> 2152 TCGA-EA-A4BA-01 CESC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2153 TCGA-EA-A50E-01 CESC 6 0 0 0 NA -1 1 0 0 0 0 0 0 #> 2154 TCGA-EA-A556-01 CESC 8 NA 0 1 0 NA NA 0 -1 1 -1 0 NA #> 2155 TCGA-EA-A5FO-01 CESC 3 0 0 0 0 0 1 0 0 0 0 0 0 #> 2156 TCGA-EA-A5O9-01 CESC 21 0 NA NA -1 -1 1 -1 -1 1 0 NA -1 #> 2157 TCGA-EA-A5ZD-01 CESC 3 1 1 0 0 0 1 0 0 0 0 0 0 #> 2158 TCGA-EA-A5ZE-01 CESC 6 0 1 0 0 -1 1 0 0 0 0 0 0 #> 2159 TCGA-EA-A5ZF-01 CESC 29 0 1 0 0 -1 1 -1 -1 1 -1 1 -1 #> 2160 TCGA-EA-A6QX-01 CESC 7 0 1 0 NA -1 0 0 NA 0 0 -1 -1 #> 2161 TCGA-EA-A78R-01 CESC 3 0 1 0 NA 0 NA 0 NA NA 0 0 0 #> 2162 TCGA-EA-A97N-01 CESC 22 0 1 -1 -1 -1 1 -1 -1 NA -1 1 0 #> 2163 TCGA-EK-A2GZ-01 CESC 10 0 1 1 1 -1 1 0 0 0 0 NA -1 #> 2164 TCGA-EK-A2H0-01 CESC 5 0 0 0 NA NA 0 0 NA NA 0 0 0 #> 2165 TCGA-EK-A2H1-01 CESC 7 0 0 1 NA 0 NA 0 0 0 0 0 0 #> 2166 TCGA-EK-A2IP-01 CESC 2 0 0 0 0 -1 0 0 0 0 -1 0 0 #> 2167 TCGA-EK-A2PG-01 CESC 24 NA 0 0 -1 -1 1 -1 -1 0 1 NA -1 #> 2168 TCGA-EK-A2PI-01 CESC 11 0 1 0 NA -1 1 NA 0 NA NA NA 0 #> 2169 TCGA-EK-A2PK-01 CESC 16 NA 1 0 0 0 0 -1 -1 1 0 1 -1 #> 2170 TCGA-EK-A2PL-01 CESC 8 NA 0 0 0 -1 0 0 0 1 -1 NA NA #> 2171 TCGA-EK-A2PM-01 CESC 22 NA 1 NA NA 1 1 -1 -1 1 NA 1 NA #> 2172 TCGA-EK-A2R7-01 CESC 10 1 1 0 0 -1 1 -1 -1 1 0 0 0 #> 2173 TCGA-EK-A2R8-01 CESC 11 0 0 -1 -1 0 NA -1 -1 0 0 0 0 #> 2174 TCGA-EK-A2R9-01 CESC 8 0 0 0 0 0 1 0 0 0 0 0 0 #> 2175 TCGA-EK-A2RA-01 CESC 33 1 NA 1 -1 1 1 -1 -1 1 -1 0 0 #> 2176 TCGA-EK-A2RB-01 CESC 5 0 0 0 0 -1 1 0 0 0 0 0 -1 #> 2177 TCGA-EK-A2RC-01 CESC 5 0 0 0 0 -1 1 0 0 0 0 -1 -1 #> 2178 TCGA-EK-A2RD-01 CESC 6 0 0 0 NA 0 NA -1 0 0 0 0 0 #> 2179 TCGA-EK-A2RE-01 CESC 5 0 0 0 0 -1 0 0 0 0 0 0 0 #> 2180 TCGA-EK-A2RJ-01 CESC 28 NA 0 1 -1 -1 -1 -1 -1 1 -1 NA -1 #> 2181 TCGA-EK-A2RK-01 CESC 17 0 0 0 0 0 0 -1 -1 1 -1 0 NA #> 2182 TCGA-EK-A2RL-01 CESC 3 0 NA 0 0 0 1 0 0 0 0 0 0 #> 2183 TCGA-EK-A2RM-01 CESC 20 NA 1 NA NA NA 1 -1 -1 0 -1 0 -1 #> 2184 TCGA-EK-A2RN-01 CESC 20 1 1 -1 -1 0 1 -1 -1 1 1 -1 -1 #> 2185 TCGA-EK-A2RO-01 CESC 7 NA 0 0 0 0 1 0 0 0 0 0 0 #> 2186 TCGA-EK-A3GJ-01 CESC 6 0 0 1 0 0 0 0 0 0 0 NA -1 #> 2187 TCGA-EK-A3GK-01 CESC 6 0 1 0 NA 0 0 -1 NA 1 -1 0 0 #> 2188 TCGA-EK-A3GM-01 CESC 18 -1 1 0 1 NA 1 0 -1 1 0 0 NA #> 2189 TCGA-EK-A3GN-01 CESC 6 NA 1 0 0 0 1 0 0 1 NA 0 0 #> 2190 TCGA-EX-A1H5-01 CESC 14 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 2191 TCGA-EX-A1H6-01 CESC 4 0 0 NA NA 0 0 0 0 0 0 -1 NA #> 2192 TCGA-EX-A3L1-01 CESC 16 -1 1 0 NA -1 1 -1 -1 1 -1 NA 0 #> 2193 TCGA-EX-A69L-01 CESC 7 0 1 0 -1 0 1 0 0 1 1 0 0 #> 2194 TCGA-EX-A69M-01 CESC 8 0 1 0 0 0 NA 0 0 0 0 NA 0 #> 2195 TCGA-EX-A8YF-01 CESC 13 0 1 0 0 0 0 NA NA 1 1 0 0 #> 2196 TCGA-FU-A23K-01 CESC 6 0 0 0 0 0 0 1 1 0 0 NA 0 #> 2197 TCGA-FU-A23L-01 CESC 23 0 1 1 0 -1 1 -1 0 1 -1 1 -1 #> 2198 TCGA-FU-A2QG-01 CESC 5 0 0 NA NA 0 0 0 0 0 -1 0 0 #> 2199 TCGA-FU-A3EO-01 CESC 4 NA 1 0 0 0 0 0 0 0 0 0 0 #> 2200 TCGA-FU-A3HY-01 CESC 9 0 0 1 NA -1 0 -1 0 1 -1 -1 -1 #> 2201 TCGA-FU-A3HZ-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2202 TCGA-FU-A3NI-01 CESC 22 NA 1 0 NA -1 1 -1 -1 1 NA 0 NA #> 2203 TCGA-FU-A3TQ-01 CESC 5 NA 0 0 0 0 0 0 0 0 0 0 0 #> 2204 TCGA-FU-A3TX-01 CESC 10 NA 0 0 0 1 1 0 0 0 0 0 0 #> 2205 TCGA-FU-A3WB-01 CESC 3 0 0 0 NA 0 1 0 0 0 0 0 0 #> 2206 TCGA-FU-A3YQ-01 CESC 4 0 0 0 0 -1 1 0 0 0 0 0 NA #> 2207 TCGA-FU-A40J-01 CESC 18 1 1 NA 1 0 1 0 0 0 0 0 -1 #> 2208 TCGA-FU-A57G-01 CESC 4 0 0 0 0 0 0 0 0 0 0 1 -1 #> 2209 TCGA-FU-A5XV-01 CESC 6 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 2210 TCGA-FU-A770-01 CESC 2 0 0 0 NA 0 0 0 0 0 0 0 0 #> 2211 TCGA-GH-A9DA-01 CESC 12 0 0 0 0 1 1 -1 -1 1 1 0 0 #> 2212 TCGA-HG-A2PA-01 CESC 7 0 1 0 0 -1 1 0 0 1 -1 NA 0 #> 2213 TCGA-HG-A9SC-01 CESC 9 0 1 0 NA NA 1 -1 NA 1 NA 0 0 #> 2214 TCGA-HM-A3JJ-01 CESC 17 0 -1 0 NA -1 0 -1 -1 1 -1 0 0 #> 2215 TCGA-HM-A3JK-01 CESC 13 1 1 0 0 1 1 0 0 0 0 0 NA #> 2216 TCGA-HM-A4S6-01 CESC 2 NA 1 0 0 0 NA 0 0 0 0 0 0 #> 2217 TCGA-HM-A6W2-01 CESC 5 0 1 0 0 0 0 0 0 0 0 0 0 #> 2218 TCGA-HM-A6W2-06 CESC 6 0 1 NA 0 0 1 1 0 -1 -1 0 0 #> 2219 TCGA-IR-A3L7-01 CESC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 2220 TCGA-IR-A3LA-01 CESC 3 0 0 NA 0 0 NA 0 NA 0 0 0 NA #> 2221 TCGA-IR-A3LB-01 CESC 6 0 0 0 0 0 0 0 0 0 0 0 0 #> 2222 TCGA-IR-A3LC-01 CESC 4 1 1 1 0 0 1 0 0 0 0 0 NA #> 2223 TCGA-IR-A3LF-01 CESC 6 NA 0 0 0 0 0 0 0 NA 0 1 NA #> 2224 TCGA-IR-A3LH-01 CESC 10 0 NA 0 0 NA 1 -1 NA 1 0 1 NA #> 2225 TCGA-IR-A3LI-01 CESC 1 0 1 0 0 0 NA 0 0 0 0 0 0 #> 2226 TCGA-IR-A3LK-01 CESC 6 0 0 0 NA NA 0 0 0 1 0 0 0 #> 2227 TCGA-IR-A3LL-01 CESC 13 1 1 0 0 0 1 0 0 1 1 0 0 #> 2228 TCGA-JW-A5VG-01 CESC 6 0 0 0 NA 0 0 0 0 1 0 0 0 #> 2229 TCGA-JW-A5VH-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2230 TCGA-JW-A5VI-01 CESC 7 0 0 0 0 -1 0 -1 0 1 -1 0 0 #> 2231 TCGA-JW-A5VJ-01 CESC 10 0 1 1 0 -1 1 0 0 0 0 -1 -1 #> 2232 TCGA-JW-A5VK-01 CESC 10 0 0 0 0 0 1 -1 -1 0 0 0 0 #> 2233 TCGA-JW-A5VL-01 CESC 5 0 0 0 1 0 1 0 0 0 0 0 0 #> 2234 TCGA-JW-A69B-01 CESC 9 0 0 0 0 0 0 0 0 0 0 NA 0 #> 2235 TCGA-JW-A852-01 CESC 2 0 1 0 0 0 NA 0 0 0 0 0 NA #> 2236 TCGA-JW-AAVH-01 CESC 5 0 1 0 0 -1 1 0 0 1 0 0 0 #> 2237 TCGA-JX-A3PZ-01 CESC 10 0 0 0 NA -1 -1 0 0 0 0 -1 -1 #> 2238 TCGA-JX-A3Q0-01 CESC 10 1 1 0 0 1 1 0 0 0 0 0 0 #> 2239 TCGA-JX-A3Q8-01 CESC 18 NA 1 0 0 -1 1 0 1 0 0 1 1 #> 2240 TCGA-JX-A5QV-01 CESC 21 1 1 1 -1 NA 1 -1 -1 1 0 -1 -1 #> 2241 TCGA-LP-A4AU-01 CESC 18 0 1 0 NA 1 1 -1 -1 0 0 1 0 #> 2242 TCGA-LP-A4AV-01 CESC 5 1 1 0 NA NA NA 0 0 1 0 0 0 #> 2243 TCGA-LP-A4AW-01 CESC 5 NA 0 0 0 0 NA -1 NA 1 -1 0 0 #> 2244 TCGA-LP-A4AX-01 CESC 7 NA 0 0 NA NA 0 NA 0 0 0 NA 0 #> 2245 TCGA-LP-A5U2-01 CESC 10 1 1 0 NA 0 NA -1 0 0 0 0 0 #> 2246 TCGA-LP-A5U3-01 CESC 3 0 0 0 NA 0 NA 0 NA NA 0 0 0 #> 2247 TCGA-LP-A7HU-01 CESC 21 0 0 1 -1 1 1 0 0 0 0 0 0 #> 2248 TCGA-MA-AA3W-01 CESC 5 0 NA 0 NA NA NA -1 NA NA 0 0 0 #> 2249 TCGA-MA-AA3X-01 CESC 22 1 1 0 0 0 1 -1 -1 0 0 0 0 #> 2250 TCGA-MA-AA3Y-01 CESC 5 0 0 0 NA 0 0 0 0 1 0 1 0 #> 2251 TCGA-MA-AA3Z-01 CESC 3 0 0 NA 0 0 NA -1 0 1 -1 NA 0 #> 2252 TCGA-MA-AA41-01 CESC 9 0 1 1 0 NA 1 NA 1 0 0 NA 0 #> 2253 TCGA-MA-AA42-01 CESC 12 0 1 0 0 -1 1 0 0 1 0 -1 -1 #> 2254 TCGA-MA-AA43-01 CESC 27 0 0 -1 -1 -1 -1 -1 -1 NA 0 1 1 #> 2255 TCGA-MU-A51Y-01 CESC 2 0 0 0 0 0 1 0 0 0 NA 0 0 #> 2256 TCGA-MU-A5YI-01 CESC 9 0 0 0 0 -1 1 0 0 0 0 1 -1 #> 2257 TCGA-MU-A8JM-01 CESC 4 0 0 0 0 0 1 -1 0 0 0 0 0 #> 2258 TCGA-MY-A5BD-01 CESC 2 0 0 0 0 0 NA 0 0 0 0 NA 0 #> 2259 TCGA-MY-A5BE-01 CESC 15 1 1 0 0 0 1 0 0 1 1 0 0 #> 2260 TCGA-MY-A5BF-01 CESC 7 0 0 0 NA 0 NA -1 0 0 0 0 0 #> 2261 TCGA-MY-A913-01 CESC 17 -1 -1 0 NA -1 NA -1 -1 -1 -1 1 NA #> 2262 TCGA-PN-A8MA-01 CESC 20 1 1 0 0 0 0 0 0 1 0 NA 0 #> 2263 TCGA-Q1-A5R1-01 CESC 1 0 0 NA -1 0 NA 0 0 0 0 0 0 #> 2264 TCGA-Q1-A5R2-01 CESC 14 NA 0 0 NA NA 1 NA -1 1 0 1 NA #> 2265 TCGA-Q1-A5R3-01 CESC 12 0 1 1 0 0 1 -1 0 1 -1 0 0 #> 2266 TCGA-Q1-A6DT-01 CESC 20 NA 0 0 NA NA 1 -1 0 1 -1 0 -1 #> 2267 TCGA-Q1-A6DV-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2268 TCGA-Q1-A6DW-01 CESC 6 NA NA 0 0 0 1 0 0 NA 0 0 0 #> 2269 TCGA-Q1-A73O-01 CESC 1 0 0 0 0 0 1 0 0 0 0 0 0 #> 2270 TCGA-Q1-A73P-01 CESC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 2271 TCGA-Q1-A73Q-01 CESC 5 0 1 0 0 -1 NA 0 0 0 0 0 0 #> 2272 TCGA-Q1-A73R-01 CESC 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 2273 TCGA-Q1-A73S-01 CESC 13 0 0 1 1 -1 -1 -1 -1 0 NA 0 0 #> 2274 TCGA-R2-A69V-01 CESC 8 NA 1 NA NA 0 1 0 NA 0 0 0 NA #> 2275 TCGA-RA-A741-01 CESC 7 0 0 0 NA 0 0 0 0 0 0 0 0 #> 2276 TCGA-UC-A7PD-01 CESC 1 0 0 NA NA 0 0 0 0 0 0 1 0 #> 2277 TCGA-UC-A7PF-01 CESC 7 0 1 1 NA -1 1 0 0 0 0 NA 0 #> 2278 TCGA-UC-A7PG-01 CESC 23 0 1 -1 -1 -1 1 -1 -1 0 0 -1 -1 #> 2279 TCGA-UC-A7PG-06 CESC 24 1 1 -1 -1 -1 1 -1 -1 0 0 0 NA #> 2280 TCGA-UC-A7PI-01 CESC 6 0 0 0 0 0 0 0 0 1 0 0 0 #> 2281 TCGA-VS-A8EB-01 CESC 18 -1 1 0 NA NA 1 -1 NA NA 0 0 -1 #> 2282 TCGA-VS-A8EC-01 CESC 16 NA 0 NA NA -1 1 -1 NA 0 0 0 0 #> 2283 TCGA-VS-A8EG-01 CESC 2 NA NA 0 NA 0 1 -1 0 0 0 0 0 #> 2284 TCGA-VS-A8EH-01 CESC 13 0 NA 0 NA NA NA -1 -1 1 NA 0 0 #> 2285 TCGA-VS-A8EI-01 CESC 9 0 0 0 NA -1 NA 0 -1 1 -1 NA NA #> 2286 TCGA-VS-A8EJ-01 CESC 16 NA NA NA NA NA 1 -1 NA 1 -1 NA -1 #> 2287 TCGA-VS-A8EL-01 CESC 4 0 1 0 NA 0 0 0 0 1 0 0 NA #> 2288 TCGA-VS-A8Q8-01 CESC 10 0 1 0 0 -1 1 -1 -1 0 0 0 0 #> 2289 TCGA-VS-A8Q9-01 CESC 10 -1 NA 0 0 -1 1 0 0 0 0 0 0 #> 2290 TCGA-VS-A8QA-01 CESC 8 0 0 0 0 -1 1 0 0 0 0 0 0 #> 2291 TCGA-VS-A8QC-01 CESC 12 NA 1 0 NA -1 1 -1 1 1 0 NA -1 #> 2292 TCGA-VS-A8QF-01 CESC 7 NA 1 0 NA NA NA 0 0 0 0 0 0 #> 2293 TCGA-VS-A8QH-01 CESC 8 0 0 0 0 NA 0 0 0 0 0 0 0 #> 2294 TCGA-VS-A8QM-01 CESC 5 0 0 0 0 0 1 0 0 0 0 0 0 #> 2295 TCGA-VS-A94W-01 CESC 7 0 0 0 0 0 1 -1 NA 0 0 0 0 #> 2296 TCGA-VS-A94X-01 CESC 13 0 1 1 0 0 1 0 0 1 0 0 0 #> 2297 TCGA-VS-A94Y-01 CESC 9 NA 1 NA NA -1 1 0 NA 1 0 NA NA #> 2298 TCGA-VS-A94Z-01 CESC 7 0 0 0 0 -1 1 0 0 0 0 0 0 #> 2299 TCGA-VS-A950-01 CESC 24 -1 NA 0 0 -1 1 -1 -1 1 0 0 NA #> 2300 TCGA-VS-A952-01 CESC 5 0 0 NA 0 0 0 0 0 0 0 1 1 #> 2301 TCGA-VS-A953-01 CESC 29 -1 -1 -1 -1 -1 1 -1 -1 1 1 NA NA #> 2302 TCGA-VS-A954-01 CESC 9 1 1 0 0 0 1 0 0 0 0 0 0 #> 2303 TCGA-VS-A957-01 CESC 3 NA 1 0 0 NA 1 0 NA 0 0 0 0 #> 2304 TCGA-VS-A958-01 CESC 4 0 0 0 0 0 0 -1 NA 1 NA 0 0 #> 2305 TCGA-VS-A959-01 CESC 14 NA 1 NA NA NA 1 -1 -1 1 0 NA -1 #> 2306 TCGA-VS-A9U5-01 CESC 22 NA 1 NA NA -1 1 -1 -1 1 NA 1 -1 #> 2307 TCGA-VS-A9U6-01 CESC 9 0 1 1 0 NA 1 0 0 0 0 NA 0 #> 2308 TCGA-VS-A9U7-01 CESC 1 0 0 0 NA 0 NA 0 0 0 0 NA 0 #> 2309 TCGA-VS-A9UA-01 CESC 6 1 1 0 0 NA 1 0 0 1 0 0 0 #> 2310 TCGA-VS-A9UB-01 CESC 11 0 0 1 NA 0 1 0 0 1 0 NA 0 #> 2311 TCGA-VS-A9UC-01 CESC 4 0 NA 1 NA 0 0 0 NA NA 1 1 -1 #> 2312 TCGA-VS-A9UD-01 CESC 28 NA 1 1 1 -1 1 -1 0 1 0 1 1 #> 2313 TCGA-VS-A9UH-01 CESC 22 1 0 -1 -1 -1 1 -1 -1 NA 0 NA 0 #> 2314 TCGA-VS-A9UI-01 CESC 15 NA 1 1 0 1 1 0 0 1 0 1 1 #> 2315 TCGA-VS-A9UJ-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2316 TCGA-VS-A9UL-01 CESC 18 NA 1 NA NA -1 NA -1 -1 1 NA 1 NA #> 2317 TCGA-VS-A9UM-01 CESC 6 NA 1 0 0 -1 1 -1 NA 0 0 0 0 #> 2318 TCGA-VS-A9UO-01 CESC 5 NA 0 0 NA 0 NA -1 -1 0 0 NA 0 #> 2319 TCGA-VS-A9UP-01 CESC 28 -1 1 1 NA -1 1 -1 -1 NA NA -1 -1 #> 2320 TCGA-VS-A9UQ-01 CESC 2 0 0 0 0 0 NA 0 0 0 0 0 0 #> 2321 TCGA-VS-A9UR-01 CESC 5 0 0 0 0 NA 0 0 0 0 0 0 0 #> 2322 TCGA-VS-A9UT-01 CESC 13 NA NA 0 0 NA 0 -1 -1 0 -1 0 NA #> 2323 TCGA-VS-A9UU-01 CESC 23 0 0 0 0 0 1 0 0 -1 -1 -1 -1 #> 2324 TCGA-VS-A9UV-01 CESC 10 0 1 0 0 -1 1 -1 0 0 0 0 0 #> 2325 TCGA-VS-A9UY-01 CESC 5 0 0 0 NA 0 NA 0 0 1 0 NA 0 #> 2326 TCGA-VS-A9UZ-01 CESC 1 0 0 0 0 0 NA 0 0 0 0 0 0 #> 2327 TCGA-VS-A9V0-01 CESC 10 NA NA 0 NA 0 NA 0 NA 0 0 0 0 #> 2328 TCGA-VS-A9V1-01 CESC 2 0 0 0 0 0 NA 0 0 0 0 0 0 #> 2329 TCGA-VS-A9V2-01 CESC 6 0 1 NA NA 0 1 0 NA 0 0 NA -1 #> 2330 TCGA-VS-A9V3-01 CESC 7 NA 1 1 0 0 0 0 0 0 0 -1 -1 #> 2331 TCGA-VS-A9V4-01 CESC 17 0 0 0 0 0 0 -1 -1 1 NA 0 0 #> 2332 TCGA-VS-A9V5-01 CESC 4 NA 0 1 -1 0 0 0 0 0 0 0 0 #> 2333 TCGA-VS-AA62-01 CESC 3 0 0 0 0 NA 1 0 0 0 0 NA 0 #> 2334 TCGA-WL-A834-01 CESC 12 0 1 1 NA NA 1 -1 -1 1 -1 0 0 #> 2335 TCGA-XS-A8TJ-01 CESC 20 0 1 0 -1 -1 1 -1 0 1 -1 0 -1 #> 2336 TCGA-ZJ-A8QO-01 CESC 17 0 0 0 0 -1 1 1 1 0 0 -1 -1 #> 2337 TCGA-ZJ-A8QQ-01 CESC 5 0 0 0 NA NA 0 0 NA NA 0 0 0 #> 2338 TCGA-ZJ-A8QR-01 CESC 5 0 0 0 NA -1 NA -1 0 0 -1 0 -1 #> 2339 TCGA-ZJ-AAX4-01 CESC 16 0 0 0 -1 -1 0 1 1 0 0 0 0 #> 2340 TCGA-ZJ-AAX8-01 CESC 1 NA 0 0 0 NA NA 0 0 1 0 0 0 #> 2341 TCGA-ZJ-AAXA-01 CESC 17 1 1 0 0 1 1 -1 -1 NA 0 1 0 #> 2342 TCGA-ZJ-AAXB-01 CESC 23 0 1 1 0 -1 1 -1 -1 1 -1 0 -1 #> 2343 TCGA-ZJ-AAXD-01 CESC 23 1 1 0 0 -1 1 -1 -1 1 1 0 0 #> 2344 TCGA-ZJ-AAXF-01 CESC 21 1 1 0 0 0 0 0 0 0 0 -1 -1 #> 2345 TCGA-ZJ-AAXI-01 CESC 6 NA 1 0 0 0 1 -1 0 1 0 0 0 #> 2346 TCGA-ZJ-AAXJ-01 CESC 7 NA NA 0 NA -1 1 -1 -1 1 0 0 0 #> 2347 TCGA-ZJ-AAXN-01 CESC 3 0 1 0 NA 0 0 0 0 1 0 0 0 #> 2348 TCGA-ZJ-AAXT-01 CESC 8 0 0 0 0 -1 0 0 0 -1 0 0 -1 #> 2349 TCGA-ZJ-AAXU-01 CESC 9 0 0 0 0 -1 1 0 0 1 0 0 0 #> 2350 TCGA-ZJ-AB0H-01 CESC 28 -1 1 1 -1 NA 1 -1 NA 1 -1 -1 -1 #> 2351 TCGA-ZJ-AB0I-01 CESC 4 0 NA NA NA NA NA -1 NA NA NA NA 0 #> 2352 TCGA-ZX-AA5X-01 CESC 4 1 1 0 NA 0 0 0 0 0 0 NA 0 #> 2353 TCGA-CS-4938-01 LGG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2354 TCGA-CS-4941-01 LGG 7 1 1 0 0 0 0 0 0 0 0 0 0 #> 2355 TCGA-CS-4942-01 LGG 2 0 0 0 0 0 0 0 0 0 0 NA 0 #> 2356 TCGA-CS-4943-01 LGG 5 0 0 0 0 0 0 NA -1 NA 0 0 0 #> 2357 TCGA-CS-4944-01 LGG 1 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 2358 TCGA-CS-5390-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2359 TCGA-CS-5393-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2360 TCGA-CS-5394-01 LGG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2361 TCGA-CS-5395-01 LGG 8 0 NA 0 0 0 NA 0 0 0 0 0 0 #> 2362 TCGA-CS-5396-01 LGG 6 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2363 TCGA-CS-5397-01 LGG 9 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 2364 TCGA-CS-6186-01 LGG 7 0 0 0 0 0 0 0 0 0 0 0 0 #> 2365 TCGA-CS-6188-01 LGG 6 0 0 0 0 0 0 0 0 0 0 0 0 #> 2366 TCGA-CS-6290-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2367 TCGA-CS-6665-01 LGG 19 1 1 0 0 0 0 1 NA 0 NA NA 1 #> 2368 TCGA-CS-6666-01 LGG 8 0 0 0 NA NA -1 1 NA 0 NA 0 0 #> 2369 TCGA-CS-6667-01 LGG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2370 TCGA-CS-6668-01 LGG 2 -1 0 0 0 NA 0 0 0 0 0 0 0 #> 2371 TCGA-CS-6669-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2372 TCGA-CS-6670-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2373 TCGA-DB-5270-01 LGG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 2374 TCGA-DB-5273-01 LGG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2375 TCGA-DB-5274-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2376 TCGA-DB-5275-01 LGG 3 NA 0 0 0 NA NA 0 -1 -1 0 0 0 #> 2377 TCGA-DB-5276-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2378 TCGA-DB-5277-01 LGG 9 0 NA NA 0 NA -1 0 -1 0 NA 0 0 #> 2379 TCGA-DB-5278-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2380 TCGA-DB-5279-01 LGG 15 -1 0 0 0 0 0 -1 -1 0 0 0 0 #> 7p 7q 8p 8q 9p 9q 10p 10q 11p 11q 12p 12q 13 (13q) 14 (14q) 15 (15q) 16p #> 1 NA NA -1 0 -1 -1 -1 NA 0 0 NA 0 NA 0 -1 0 #> 2 1 1 1 1 1 1 1 NA 1 0 -1 -1 1 0 0 1 #> 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NA 0 #> 4 0 0 1 1 NA 0 0 NA NA 1 1 1 -1 -1 NA -1 #> 5 1 1 0 1 -1 0 -1 NA 0 0 0 0 NA 1 NA 0 #> 6 0 NA -1 NA -1 0 0 -1 -1 -1 1 0 NA NA -1 0 #> 7 0 0 1 1 0 NA 0 0 NA 0 0 0 0 0 NA 0 #> 8 0 0 -1 0 -1 0 0 NA NA 0 0 NA NA 1 NA NA #> 9 NA 0 -1 1 NA 1 NA NA NA -1 0 0 -1 NA NA 1 #> 10 1 1 -1 NA NA -1 1 NA -1 -1 1 0 -1 -1 0 0 #> 11 -1 1 -1 1 -1 -1 0 0 0 0 0 0 -1 0 NA 0 #> 12 1 NA NA 1 0 -1 -1 1 NA -1 1 NA NA 1 NA NA #> 13 1 NA NA 0 NA -1 -1 NA 0 0 0 0 NA NA 1 0 #> 14 0 0 0 NA -1 0 0 0 0 0 0 0 NA 0 0 0 #> 15 0 NA NA NA NA 0 NA -1 0 0 0 0 -1 NA 0 NA #> 16 1 0 -1 0 -1 0 0 NA NA 0 NA NA 0 0 0 -1 #> 17 0 0 0 0 -1 0 0 0 -1 0 1 1 -1 -1 0 1 #> 18 1 NA 1 1 -1 0 NA -1 NA 1 1 NA -1 0 NA 1 #> 19 1 1 -1 1 NA -1 -1 NA 0 0 0 0 -1 0 0 0 #> 20 1 1 -1 1 -1 1 -1 -1 -1 -1 0 0 -1 1 1 -1 #> 21 1 0 0 NA NA 0 -1 0 1 1 1 0 1 1 1 0 #> 22 0 0 NA NA -1 0 -1 0 -1 0 0 0 -1 0 -1 NA #> 23 1 NA -1 1 -1 -1 -1 -1 -1 -1 -1 -1 1 -1 -1 1 #> 24 0 -1 0 0 -1 -1 NA -1 -1 0 0 NA NA 0 NA 0 #> 25 0 0 -1 NA 0 NA NA 0 -1 0 NA NA NA NA 0 0 #> 26 1 1 NA 1 -1 0 1 -1 1 -1 0 0 NA 0 0 0 #> 27 1 0 NA 1 0 0 0 0 0 0 0 0 0 -1 0 0 #> 28 -1 NA -1 NA -1 -1 -1 1 NA 0 1 0 NA 0 NA -1 #> 29 -1 0 -1 NA -1 NA 1 NA NA -1 NA 0 -1 NA -1 0 #> 30 0 0 0 0 0 0 0 NA 0 NA NA 0 -1 -1 NA 0 #> 31 0 NA 0 0 0 0 0 -1 0 0 0 0 0 0 NA 0 #> 32 0 0 -1 0 NA 0 -1 -1 0 0 0 0 NA 0 -1 0 #> 33 0 0 NA 0 NA -1 0 0 0 0 0 0 0 0 0 -1 #> 34 0 0 -1 NA -1 -1 0 NA 0 0 0 0 0 0 0 0 #> 35 0 NA 0 0 -1 -1 -1 -1 0 -1 -1 -1 -1 0 0 0 #> 36 1 1 0 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— pcawg_purity","title":"Purity Data of PCAWG — pcawg_purity","text":"Purity Data PCAWG","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pcawg_purity.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Purity Data of PCAWG — pcawg_purity","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pcawg_purity.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Purity Data of PCAWG — pcawg_purity","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pcawg_purity.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Purity Data of PCAWG — pcawg_purity","text":"","code":"data(\"pcawg_purity\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pipe.html","id":null,"dir":"Reference","previous_headings":"","what":"Pipe Operator — %>%","title":"Pipe Operator — %>%","text":"See magrittr::%>% details.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pipe.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Pipe Operator — %>%","text":"","code":"lhs %>% rhs"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Download data for shiny general analysis — query_general_value","title":"Download data for shiny general analysis — query_general_value","text":"Download data shiny general analysis","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Download data for shiny general analysis — query_general_value","text":"","code":"query_general_value( L1, L2, L3, database = c(\"toil\", \"pcawg\", \"ccle\"), tpc_value_nonomics = NULL, opt_pancan = NULL, custom_metadata = NULL )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Download data for shiny general analysis — query_general_value","text":"L1 level 1 main datatype L2 level 2 sub datatype L3 level 3 identifier database one c(\"toil\",\"pcawg\",\"ccle\") tpc_value_nonomics non-omics matrix data one database opt_pancan molecular datasets parameters custom_metadata user customized metadata","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Download data for shiny general analysis — query_general_value","text":"","code":"if (FALSE) { # \\dontrun{ general_value_id <- UCSCXenaShiny:::query_general_id() tcga_value_option <- general_value_id[[\"value\"]][[1]] tcga_index_value <- tcga_value_option[[\"Tumor index\"]] tcga_immune_value <- tcga_value_option[[\"Immune Infiltration\"]] tcga_pathway_value <- tcga_value_option[[\"Pathway activity\"]] tcga_phenotype_value <- tcga_value_option[[\"Phenotype data\"]] clinical_phe = tcga_phenotype_value[[\"Clinical Phenotype\"]] x_data = UCSCXenaShiny:::query_general_value( \"Molecular profile\", \"mRNA Expression\", \"TP53\", \"toil\", tcga_index_value, tcga_immune_value, tcga_pathway_value, clinical_phe) y_data = UCSCXenaShiny:::query_general_value( \"Immune Infiltration\", \"CIBERSORT\", \"Monocyte\", \"toil\", tcga_index_value, tcga_immune_value, tcga_pathway_value, clinical_phe) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"Get Molecule Signature Data Values Dense (Genomic) Matrix Dataset UCSC Xena Data Hubs","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"","code":"query_molecule_value(dataset, molecule, host = NULL)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"dataset UCSC Xena dataset dense matrix format (rows features (e.g., gene, cell line) columns samples). molecule molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). NOTE, signature specified, space must exist input. host UCSC Xena host, default NULL, auto-detect dataset.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"named vector.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"","code":"# What does dense matrix mean? table(UCSCXenaTools::XenaData$Type) #> #> clinicalMatrix genomicMatrix genomicSegment mutationVector #> 345 981 152 203 # It is a the UCSC Xena dataset with \"Type\" equals to \"genomicMatrix\" if (FALSE) { # \\dontrun{ dataset <- \"ccle/CCLE_copynumber_byGene_2013-12-03\" x <- query_molecule_value(dataset, \"TP53\") head(x) signature <- \"TP53 + 2*KRAS - 1.3*PTEN\" # a space must exist in the string y <- query_molecule_value(dataset, signature) head(y) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"Query Single Identifier Signature Value Pan-cancer Database","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"","code":"query_pancan_value( molecule, data_type = c(\"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\", \"fusion\", \"promoter\", \"APOBEC\"), database = c(\"toil\", \"ccle\", \"pcawg\"), reset_id = NULL, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"molecule molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type data type. Can one \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". database database, either 'toil' TCGA TARGET GTEx, 'ccle' CCLE. reset_id NULL, set specified variable parent frame \"Signature\". opt_pancan extra parameters passing underlying functions.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"list.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"details","dir":"Reference","previous_headings":"","what":"Details","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"query_pancan_value() provide convenient interface download multi-omics data 3 databases specifying one several canonical datasets. derived query_pancan_value() support query genomic signature. query comprehensive datasets UCSCXena supports, users can check UCSCXenaTools::XenaData use get_pancan_value() directly. Option opt_pancan nested list allow adjust downloading details. now, cnv(toil),methylation(toil),miRNA(toil),miRNA(pcawg),promoter(pcawg) support optional parameters. default set .opt_pancan check meanings sublist(parameters) following relationship.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"-toil-database","dir":"Reference","previous_headings":"","what":"\"toil\" database","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"mRNA–get_pancan_gene_value() transcript–get_pancan_transcript_value() protein–get_pancan_protein_value() mutation–get_pancan_mutation_status() cnv–get_pancan_cn_value() methylation–get_pancan_methylation_value() miRNA–get_pancan_miRNA_value()","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"-ccle-database","dir":"Reference","previous_headings":"","what":"\"ccle\" database","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"mRNA–get_ccle_gene_value() protein–get_ccle_protein_value() mutation–get_ccle_mutation_status() cnv–get_ccle_cn_value()","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"-pcawg-database","dir":"Reference","previous_headings":"","what":"\"pcawg\" database","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"mRNA–get_pcawg_gene_value() miRNA–get_pcawg_miRNA_value() promoter–get_pcawg_promoter_value() fusion–get_pcawg_fusion_value() APOBEC–get_pcawg_APOBEC_mutagenesis_value()","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"","code":"if (FALSE) { # \\dontrun{ query_pancan_value(\"KRAS\") query_pancan_value(\"KRAS\", database = \"ccle\") query_pancan_value(\"KRAS\", database = \"pcawg\") query_pancan_value(\"ENSG00000000419\", database = \"pcawg\", data_type = \"fusion\" ) # gene symbol also work .opt_pancan opt_pancan <- list(toil_cnv = list(use_thresholded_data = FALSE)) query_pancan_value(\"PTEN\", data_type = \"cnv\", database = \"toil\", opt_pancan = opt_pancan) opt_pancan <- list(toil_methylation = list(type = \"450K\", rule_out = \"cg21115430\", aggr = \"Q25\")) query_pancan_value(\"PTEN\", data_type = \"methylation\", database = \"toil\", opt_pancan = opt_pancan) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":null,"dir":"Reference","previous_headings":"","what":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"Group TPC samples build-custom phenotype support filtering merging operations","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"","code":"query_tcga_group( database = c(\"toil\", \"pcawg\", \"ccle\"), cancer = NULL, custom = NULL, group = \"Gender\", filter_by = NULL, filter_id = NULL, merge_by = NULL, merge_quantile = FALSE, return_all = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"database one c(\"toil\",\"pcawg\",\"ccle\") cancer select cancer cohort(s) custom upload custom phenotype data group target group names filter_by filter samples one multiple criterion filter_id directly filter samples provided sample ids merge_by merge target group main categories merge_quantile whether merge numerical variable percentiles return_all return phenotype data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"list object grouping samples statistics","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"","code":"if (FALSE) { # \\dontrun{ query_tcga_group(group = \"Age\") query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\" ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", filter_by = list( c(\"Code\", c(\"TP\"), \"+\"), c(\"Stage_ajcc\", c(NA), \"-\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", filter_by = list( c(\"Age\", c(0.5), \"%>\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", filter_by = list( c(\"Age\", c(60), \">\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", merge_by = list( \"Early\" = c(\"Stage I\"), \"Late\" = c(\"Stage II\", \"Stage III\", \"Stage IV\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Age\", merge_by = list( \"Young\" = c(20, 60), \"Old\" = c(60, NA) ) ) query_tcga_group( cancer = \"BRCA\", group = \"Age\", merge_quantile = TRUE, merge_by = list( \"Young\" = c(0, 0.5), \"Old\" = c(0.5, 1) ) ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":null,"dir":"Reference","previous_headings":"","what":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"Obtain ToilHub Info Single Molecule Obtain ToilHub Info Single Gene","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"","code":"query_toil_value_df(identifier = \"TP53\") query_toil_value_df(identifier = \"TP53\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"identifier length-1 character representing gene symbol, ensembl gene id, probe id. Gene symbol highly recommended.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"tibble tibble","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"","code":"if (FALSE) { # \\dontrun{ t <- query_toil_value_df() t } # } if (FALSE) { # \\dontrun{ t <- query_toil_value_df() t } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: TCGA Clinical Data — tcga_clinical","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"See tcga_surv TCGA survival data.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"","code":"data(\"tcga_clinical\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"See tcga_surv TCGA survival data.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"","code":"data(\"tcga_clinical_fine\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: Genome Instability Data — tcga_genome_instability","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"TCGA: Genome Instability Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"https://gdc.cancer.gov/-data/publications/PanCanStemness-2018","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"","code":"data(\"tcga_genome_instability\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_gtex.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","title":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","text":"Toil Hub: Merged TCGA GTEx Selected Phenotype","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_gtex.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_gtex.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","text":"","code":"data(\"tcga_gtex\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: Purity Data — tcga_purity","title":"TCGA: Purity Data — tcga_purity","text":"TCGA: Purity Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: Purity Data — tcga_purity","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA: Purity Data — tcga_purity","text":"https://www.nature.com/articles/ncomms9971#Sec14","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: Purity Data — tcga_purity","text":"","code":"data(\"tcga_purity\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA Subtype Data — tcga_subtypes","title":"TCGA Subtype Data — tcga_subtypes","text":"TCGA Subtype Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA Subtype Data — tcga_subtypes","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA Subtype Data — tcga_subtypes","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA Subtype Data — tcga_subtypes","text":"","code":"data(\"tcga_subtypes\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: TCGA Survival Data — tcga_surv","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"Toil Hub: TCGA Survival Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"","code":"data(\"tcga_surv\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA Survival Analysis — tcga survival analysis","title":"TCGA Survival Analysis — tcga survival analysis","text":"Firstly, get merged data one molecular profile value associated clinical data TCGA Pan-Cancer dataset. Secondly, filter data wish. Finally, show K-M plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"TCGA Survival Analysis — tcga survival analysis","text":"","code":"tcga_surv_get( item, TCGA_cohort = \"LUAD\", profile = c(\"mRNA\", \"miRNA\", \"methylation\", \"transcript\", \"protein\", \"mutation\", \"cnv\"), TCGA_cli_data = dplyr::full_join(load_data(\"tcga_clinical\"), load_data(\"tcga_surv\"), by = \"sample\"), opt_pancan = .opt_pancan ) tcga_surv_plot( data, time = \"time\", status = \"status\", cutoff_mode = c(\"Auto\", \"Custom\"), cutpoint = c(50, 50), cnv_type = c(\"Duplicated\", \"Normal\", \"Deleted\"), profile = c(\"mRNA\", \"miRNA\", \"methylation\", \"transcript\", \"protein\", \"mutation\", \"cnv\"), palette = \"aaas\", ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"TCGA Survival Analysis — tcga survival analysis","text":"item molecular identifier, can gene symbol (common cases), protein symbol, etc. TCGA_cohort TCGA cohort, e.g. \"LUAD\" (default), \"LUSC\", \"ACC\". profile molecular profile. Option can one \"mRNA\" (default), \"miRNA\", \"methylation\", \"transcript\", \"protein\", \"mutation\", \"cnv\". TCGA_cli_data data.frame containing TCGA clinical data. Default use pre-compiled TCGA clinical data package. opt_pancan specify one dataset molercular profiles data subset result tcga_surv_get(). time column name \"time\". status column name \"status\". cutoff_mode mode grouping samples, can \"Auto\" (default) \"Custom\". cutpoint cut point (percent) \"Custom\" mode, default c(50, 50). cnv_type used profile \"cnv\", can select c(\"Duplicated\", \"Normal\", \"Deleted\"). palette color palette, can \"hue\", \"grey\", \"RdBu\", \"Blues\", \"npg\", \"aaas\", etc. see ?survminer::ggsurvplot. ... parameters passing survminer::ggsurvplot","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"TCGA Survival Analysis — tcga survival analysis","text":"data.frame plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA Survival Analysis — tcga survival analysis","text":"","code":"if (FALSE) { # \\dontrun{ # 1. get data data <- tcga_surv_get(\"TP53\") # 2. filter data (optional) # 3. show K-M plot tcga_surv_plot(data, time = \"DSS.time\", status = \"DSS\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"TCGA: TMB (Tumor Mutation Burden) Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"https://gdc.cancer.gov/-data/publications/panimmune","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"","code":"data(\"tcga_tmb\") #> Warning: data set ‘tcga_tmb’ not found"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"Toil Hub: TCGA TARGET GTEX Selected Phenotype","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"","code":"data(\"toil_info\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"Visualize CCLE Gene Expression Correlation","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"","code":"vis_ccle_gene_cor( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", cor_method = \"spearman\", use_log_x = FALSE, use_log_y = FALSE, use_regline = TRUE, SitePrimary = \"prostate\", use_all = FALSE, alpha = 0.5, color = \"#000000\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" cor_method correlation method use_log_x TRUE, log X values. use_log_y TRUE, log Y values. use_regline TRUE, add regression line. SitePrimary select cell line origin tissue. use_all use sample, default FALSE. alpha dot alpha. color dot color. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize CCLE Gene Expression — vis_ccle_tpm","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"Visualize CCLE Gene Expression","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"","code":"vis_ccle_tpm( Gene = \"TP53\", data_type = \"mRNA\", use_log = FALSE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type support genomic profile CCLE, currently \"mRNA\", \"protein\",\"cnv\" supported use_log TRUE, log values. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"Visualize distribution difference samples dimensionality reduction analysis","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"","code":"vis_dim_dist( ids = c(\"TP53\", \"KRAS\", \"PTEN\", \"MDM2\", \"CDKN1A\"), data_type = \"mRNA\", group_info = NULL, DR_method = c(\"PCA\", \"UMAP\", \"tSNE\"), palette = \"Set1\", add_margin = NULL, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"ids molecular identifiers (>=3) data_type molecular types, refer query_pancan_value() function group_info two-column grouping information names 'Sample','Group' DR_method dimensionality reduction method palette color setting RColorBrewer add_margin marginal plot (NULL, \"density\", \"boxplot\") opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"ggplot object rawdata list","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"","code":"if (FALSE) { # \\dontrun{ group_info <- tcga_clinical_fine %>% dplyr::filter(Cancer == \"BRCA\") %>% dplyr::select(Sample, Code) %>% dplyr::rename(Group = Code) vis_dim_dist( ids = c(\"TP53\", \"KRAS\", \"PTEN\", \"MDM2\", \"CDKN1A\"), group_info = group_info ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"Heatmap Correlation Gene Tumor Immune Infiltration (TIL)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"","code":"vis_gene_TIL_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", sig = c(\"B cell_TIMER\", \"T cell CD4+_TIMER\", \"T cell CD8+_TIMER\", \"Neutrophil_TIMER\", \"Macrophage_TIMER\", \"Myeloid dendritic cell_TIMER\"), Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". sig Immune Signature, default: result TIMER Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_TIL_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","title":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","text":"Visualize Gene-Gene Correlation TCGA","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","text":"","code":"vis_gene_cor( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", use_regline = TRUE, purity_adj = TRUE, alpha = 0.5, color = \"#000000\", filter_tumor = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" use_regline TRUE, add regression line. purity_adj whether performing partial correlation adjusted purity alpha dot alpha. color dot color. filter_tumor whether use tumor sample , default TRUE opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor_cancer.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","title":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","text":"Visualize Gene-Gene Correlation TCGA Cancer Type","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor_cancer.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","text":"","code":"vis_gene_cor_cancer( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", purity_adj = TRUE, cancer_choose = \"GBM\", use_regline = TRUE, cor_method = \"spearman\", use_all = FALSE, alpha = 0.5, color = \"#000000\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor_cancer.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" purity_adj whether performing partial correlation adjusted purity cancer_choose TCGA cohort name, e.g. \"ACC\". use_regline TRUE, add regression line. cor_method correlation method. use_all use sample, default FALSE. alpha dot alpha. color dot color. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"Visualize cross-omics one gene among pan-cancers","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"","code":"vis_gene_cross_omics( gene = \"TP53\", tumor_projects = NULL, tumor_samples = NULL, n_trans = 5, n_methy = 5, seed = 42, pval_mrna = c(0.05, 0.01, 0.001), return_list = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"gene gene symbol identifier (e.g., \"TP53\") tumor_projects Select specific TCGA projects. Default NULL, indicating TCGA projects. tumor_samples Select specific tumor samples. Default NULL, indicating tumor samples. n_trans number sampling transcripts specific transcript identifiers. n_methy number sampling CpG sites specific CpG identifiers. seed seed sampling. pval_mrna P value thresholds return_list TRUE returns list including plot object data. FALSE just returns plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"funkyheatmap","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"See analyze_gene_drug_response_asso examples.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"","code":"vis_gene_drug_response_asso( Gene = \"TP53\", x_axis_type = c(\"mean.diff\", \"median.diff\"), output_form = c(\"plotly\", \"ggplot2\") )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). x_axis_type set value type X axis. output_form plotly ggplot2.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"plotly ggplot2 object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"See analyze_gene_drug_response_diff examples.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"","code":"vis_gene_drug_response_diff( Gene = \"TP53\", tissue = \"lung\", Show.P.label = TRUE, Method = \"wilcox.test\", values = c(\"#DF2020\", \"#DDDF21\"), alpha = 0.5 )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). tissue select cell line origin tissue. Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal alpha set alpha dots.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"ggplot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"Heatmap Correlation Gene Immune Signatures","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"","code":"vis_gene_immune_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Immune_sig_type = \"Cibersort\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Immune_sig_type quantification method, default \"Cibersort\" Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_immune_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"Visualize Correlation Gene MSI (Microsatellite instability)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"","code":"vis_gene_msi_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_msi_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"Visualize Correlation Gene Pathway signature Score","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"","code":"vis_gene_pw_cor( Gene = \"TP53\", data_type = \"mRNA\", pw_name = \"HALLMARK_ADIPOGENESIS\", cancer_choose = \"GBM\", use_regline = TRUE, cor_method = \"spearman\", use_all = FALSE, alpha = 0.5, color = \"#000000\", filter_tumor = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". pw_name queried Pathway name, see supported pathway 'load(\"toil_sig_score\")'default NULL cancer_choose select cancer cohort(s) use_regline TRUE, add regression line. cor_method select correlation coefficient (pearson/spearman) use_all use sample, default FALSE. alpha dot alpha. color dot color. filter_tumor whether use tumor sample , default TRUE opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"ggplot object dataframe","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"","code":"if (FALSE) { # \\dontrun{ vis_gene_pw_cor( Gene = \"TP53\", data_type = \"mRNA\", pw_name = \"HALLMARK_ADIPOGENESIS\", cancer_choose = \"BRCA\" ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"Visualize Correlation Gene Tumor Stemness","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"","code":"vis_gene_stemness_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_stemness_cor(Gene = \"TP53\") p } # } ## To generate a radar plot, uncomment the following code # pdata <- p$data %>% # dplyr::mutate(cor = round(cor, digits = 3), p.value = round(p.value, digits = 3)) # # df <- pdata %>% # select(cor, cancer) %>% # pivot_wider(names_from = cancer, values_from = cor) # # ggradar::ggradar( # df[1, ], # font.radar = \"sans\", # values.radar = c(\"-1\", \"0\", \"1\"), # grid.min = -1, grid.mid = 0, grid.max = 1, # # Background and grid lines # background.circle.colour = \"white\", # gridline.mid.colour = \"grey\", # # Polygons # group.line.width = 1, # group.point.size = 3, # group.colours = \"#00AFBB\") + # theme(plot.title = element_text(hjust = .5))"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"Visualize Correlation Gene TMB (Tumor Mutation Burden)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"","code":"vis_gene_tmb_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_tmb_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"","code":"vis_identifier_cor( dataset1, id1, dataset2, id2, samples = NULL, use_ggstats = FALSE, use_simple_axis_label = TRUE, line_color = \"blue\", alpha = 0.5, ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"dataset1 dataset obtain id1. id1 first molecule identifier. dataset2 dataset obtain id2. id2 second molecule identifier. samples default NULL, can common sample names two datasets. use_ggstats TRUE, use ggstatsplot package plotting. use_simple_axis_label TRUE (default), use simple axis labels. Otherwise, data subtype labeled. line_color set color regression line. alpha set alpha dots. ... parameters passing ggscatter.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"","code":"if (FALSE) { # \\dontrun{ dataset <- \"TcgaTargetGtex_rsem_isoform_tpm\" id1 <- \"TP53\" id2 <- \"KRAS\" vis_identifier_cor(dataset, id1, dataset, id2) samples <- c( \"TCGA-D5-5538-01\", \"TCGA-VM-A8C8-01\", \"TCGA-ZN-A9VQ-01\", \"TCGA-EE-A17X-06\", \"TCGA-05-4420-01\" ) vis_identifier_cor(dataset, id1, dataset, id2, samples) dataset1 <- \"TCGA-BLCA.htseq_counts.tsv\" dataset2 <- \"TCGA-BLCA.gistic.tsv\" id1 <- \"TP53\" id2 <- \"KRAS\" vis_identifier_cor(dataset1, id1, dataset2, id2) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"","code":"vis_identifier_dim_dist( dataset = NULL, ids = NULL, grp_df, samples = NULL, return.data = FALSE, DR_method = c(\"PCA\", \"UMAP\", \"tSNE\"), add_margin = NULL, palette = \"Set1\" )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"dataset dataset obtain identifiers. ids molecule identifiers. grp_df dataset id NULL, data.frame 2 columns. first column refers sample ID. second column refers groups indicated axis X. samples default NULL, can common sample names two datasets. return.data whether reture raw meta/matrix data (list) instead plot DR_method dimensionality reduction method add_margin marginal plot (NULL, \"density\", \"boxplot\") palette color setting RColorBrewer","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"ggplot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"","code":"# vis_identifier_dim_dist(expr_dataset, ids, grp_df, DR_method=\"PCA\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"","code":"vis_identifier_grp_comparison( dataset = NULL, id = NULL, grp_df, samples = NULL, fun_type = c(\"betweenstats\", \"withinstats\"), type = c(\"parametric\", \"nonparametric\", \"robust\", \"bayes\"), pairwise.comparisons = TRUE, p.adjust.method = c(\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"BY\", \"fdr\", \"none\"), ggtheme = cowplot::theme_cowplot(), ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"dataset dataset obtain identifiers. id molecule identifier. grp_df dataset id NULL, data.frame 2 3 columns. first column refers sample ID. second column refers groups indicated axis X. third column optional, indicates facet variable. dataset id NULL, data.frame 3 4 columns. first column refers sample ID. second column refers values indicated axis Y. third column refers groups indicated axis X. fourth column optional, indicates facet variable. samples default NULL, can common sample names two datasets. fun_type select function compare groups. type character specifying type statistical approach: \"parametric\" \"nonparametric\" \"robust\" \"bayes\" can specify just initial letter. pairwise.comparisons whether pairwise comparison p.adjust.method Adjustment method p-values multiple comparisons. Possible methods : \"holm\" (default), \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\". ggtheme {ggplot2} theme. Default value ggstatsplot::theme_ggstatsplot(). {ggplot2} themes (e.g., theme_bw()), themes extension packages allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). note sometimes themes remove details {ggstatsplot} plots typically contains. example, relevant, ggbetweenstats() shows details multiple comparison test label secondary Y-axis. themes (e.g. ggthemes::theme_fivethirtyeight()) remove secondary Y-axis thus details well. ... parameters passing ggstatsplot::ggbetweenstats ggstatsplot::ggwithinstats.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"","code":"if (FALSE) { # \\dontrun{ library(UCSCXenaTools) expr_dataset <- \"TCGA.LUAD.sampleMap/HiSeqV2_percentile\" cli_dataset <- \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" id <- \"TP53\" cli_df <- XenaGenerate( subset = XenaDatasets == \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" ) %>% XenaQuery() %>% XenaDownload() %>% XenaPrepare() # group data.frame with 2 columns vis_identifier_grp_comparison(expr_dataset, id, cli_df[, c(\"sampleID\", \"gender\")]) # group data.frame with 3 columns vis_identifier_grp_comparison( expr_dataset, id, cli_df[, c(\"sampleID\", \"pathologic_M\", \"gender\")] %>% dplyr::filter(pathologic_M %in% c(\"M0\", \"MX\")) ) # When not use the value of `identifier` from `dataset` vis_identifier_grp_comparison(grp_df = cli_df[, c(1, 2, 71)]) vis_identifier_grp_comparison(grp_df = cli_df[, c(1, 2, 71, 111)]) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"","code":"vis_identifier_grp_surv( dataset = NULL, id = NULL, surv_df, samples = NULL, cutoff_mode = c(\"Auto\", \"Custom\", \"None\"), cutpoint = c(50, 50), palette = \"aaas\", ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"dataset dataset obtain identifiers. id molecule identifier. surv_df data.frame. \"time\" unit \"days\". 3 columns, names \"sample\", \"time\", \"status\". 4 columns, names \"sample\", \"value\", \"time\", \"status\". samples default NULL, can common sample names two datasets. cutoff_mode mode grouping samples, can \"Auto\" (default) \"Custom\" \"None\" (groups prepared). cutpoint cut point (percent) \"Custom\" mode, default c(50, 50). palette color palette, can \"hue\", \"grey\", \"RdBu\", \"Blues\", \"npg\", \"aaas\", etc. see ?survminer::ggsurvplot. ... parameters passing survminer::ggsurvplot","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"","code":"if (FALSE) { # \\dontrun{ library(UCSCXenaTools) expr_dataset <- \"TCGA.LUAD.sampleMap/HiSeqV2_percentile\" cli_dataset <- \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" id <- \"KRAS\" cli_df <- XenaGenerate( subset = XenaDatasets == \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" ) %>% XenaQuery() %>% XenaDownload() %>% XenaPrepare() # Use individual survival data surv_df1 <- cli_df[, c(\"sampleID\", \"ABSOLUTE_Ploidy\", \"days_to_death\", \"vital_status\")] surv_df1$vital_status <- ifelse(surv_df1$vital_status == \"DECEASED\", 1, 0) vis_identifier_grp_surv(surv_df = surv_df1) # Use both dataset argument and vis_identifier_grp_surv(surv_df = surv_df1) surv_df2 <- surv_df1[, c(1, 3, 4)] vis_identifier_grp_surv(expr_dataset, id, surv_df = surv_df2) vis_identifier_grp_surv(expr_dataset, id, surv_df = surv_df2, cutoff_mode = \"Custom\", cutpoint = c(25, 75) ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"","code":"vis_identifier_multi_cor( dataset, ids, samples = NULL, matrix.type = c(\"full\", \"upper\", \"lower\"), type = c(\"parametric\", \"nonparametric\", \"robust\", \"bayes\"), partial = FALSE, sig.level = 0.05, p.adjust.method = c(\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"BY\", \"fdr\", \"none\"), color_low = \"#E69F00\", color_high = \"#009E73\", ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"dataset dataset obtain identifiers. ids molecule identifiers. samples default NULL, can common sample names two datasets. matrix.type Character, \"upper\" (default), \"lower\", \"full\", display full matrix, lower triangular upper triangular matrix. type character specifying type statistical approach: \"parametric\" \"nonparametric\" \"robust\" \"bayes\" can specify just initial letter. partial Can TRUE partial correlations. Bayesian partial correlations, \"full\" instead pseudo-Bayesian partial correlations (.e., Bayesian correlation based frequentist partialization) returned. sig.level Significance level (Default: 0.05). p-value p-value matrix bigger sig.level, corresponding correlation coefficient regarded insignificant flagged plot. p.adjust.method Adjustment method p-values multiple comparisons. Possible methods : \"holm\" (default), \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\". color_low color code lower value mapping. color_high color code higher value mapping. ... parameters passing ggstatsplot::ggcorrmat.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"","code":"if (FALSE) { # \\dontrun{ dataset <- \"TcgaTargetGtex_rsem_isoform_tpm\" ids <- c(\"TP53\", \"KRAS\", \"PTEN\") vis_identifier_multi_cor(dataset, ids) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"Visualize Single Gene Expression Anatomy Location","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"","code":"vis_pancan_anatomy( Gene = \"TP53\", Gender = c(\"Female\", \"Male\"), data_type = \"mRNA\", option = \"D\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gender string, \"Female\" (default) \"Male\". data_type choose gene profile type, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv\" option character string indicating color map option use. Eight options available: \"magma\" (\"\") \"inferno\" (\"B\") \"plasma\" (\"C\") \"viridis\" (\"D\") \"cividis\" (\"E\") \"rocket\" (\"F\") \"mako\" (\"G\") \"turbo\" (\"H\") opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"Visualize cross-omics one pathway among pan-cancers","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"","code":"vis_pathway_cross_omics( pw = \"HALLMARK_ADIPOGENESIS\", tumor_projects = NULL, tumor_samples = NULL, pval_mrna = c(0.05, 0.01, 0.001), return_list = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"pw pathway name tumor_projects Select specific TCGA projects. Default NULL, indicating TCGA projects. tumor_samples Select specific tumor samples. Default NULL, indicating tumor samples. pval_mrna P value thresholds return_list TRUE returns list including plot object data. FALSE just returns plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"funkyheatmap","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize molecular profile in PCAWG — vis_pcawg_dist","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"Visualize molecular profile PCAWG","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"","code":"vis_pcawg_dist( Gene = \"TP53\", Mode = c(\"Boxplot\", \"Violinplot\"), data_type = \"mRNA\", Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Mode \"Boxplot\" \"Violinplot\" represent data data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal draw_quantiles draw quantiles violinplot trim whether trim violin opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_pcawg_dist(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"Visualize Gene-Gene Correlation TCGA","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"","code":"vis_pcawg_gene_cor( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", cor_method = \"spearman\", purity_adj = TRUE, use_log_x = FALSE, use_log_y = FALSE, use_regline = TRUE, dcc_project_code_choose = \"BLCA-US\", use_all = FALSE, filter_tumor = TRUE, alpha = 0.5, color = \"#000000\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" cor_method correlation method purity_adj whether performing partial correlation adjusted purity use_log_x TRUE, log X values. use_log_y TRUE, log Y values. use_regline TRUE, add regression line. dcc_project_code_choose select project code. use_all use sample, default FALSE. filter_tumor whether use tumor sample , default TRUE alpha dot alpha. color dot color. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"Visualize Single Gene Univariable Cox Result PCAWG","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"","code":"vis_pcawg_unicox_tree( Gene = \"TP53\", measure = \"OS\", data_type = \"mRNA\", use_optimal_cutoff = FALSE, values = c(\"grey\", \"#E31A1C\", \"#377DB8\"), opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). measure survival measure, e.g. \"OS\". data_type choose gene profile type, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv\" use_optimal_cutoff use surv_cutpoint survminer package thresholding samples cancer type. values color fill tumor normal opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_pcawg_unicox_tree(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"Visualize molecular profile difference mutation wild status queried gene","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"","code":"vis_toil_Mut( mut_Gene = \"TP53\", Gene = NULL, data_type = NULL, Mode = c(\"Boxplot\", \"Violinplot\"), Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"mut_Gene queried gene determine grouping based mutation wild status Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type choose gene profile type, including \"mRNA\", \"transcript\", \"methylation\", \"miRNA\". Mode choose one visualize mode represent data Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill mutation wild status draw_quantiles draw quantiles violinplot trim whether trim violin opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"ggplot object tibble data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_toil_Mut(mut_Gene = \"TP53\") p <- vis_toil_Mut(mut_Gene = \"TP53\", Gene = \"TNF\") p <- vis_toil_Mut(mut_Gene = \"TP53\", Gene = \"hsa-let-7d-3p\", data_type = \"miRNA\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"Visualize molecular profile difference mutation wild status queried gene Single Cancer Type","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"","code":"vis_toil_Mut_cancer( mut_Gene = \"TP53\", Gene = NULL, data_type = NULL, Mode = c(\"Dotplot\", \"Violinplot\"), Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, Cancer = \"ACC\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"mut_Gene queried gene determine grouping based mutation wild status Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type choose gene profile type, including \"mRNA\", \"transcript\", \"methylation\", \"miRNA\". Mode choose one visualize mode represent data Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill mutation wild status draw_quantiles draw quantiles violinplot trim whether trim violin Cancer select cancer cohort(s). opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"ggplot object tibble data.frame.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx))","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"","code":"vis_toil_TvsN( Gene = \"TP53\", Mode = c(\"Boxplot\", \"Violinplot\"), data_type = \"mRNA\", Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), TCGA.only = FALSE, draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, include.Tumor.only = FALSE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Mode \"Boxplot\" \"Violinplot\" represent data data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal TCGA.include samples TCGA dataset draw_quantiles draw quantiles violinplot trim whether trim violin include.Tumor.TRUE, include \"UVM\" \"MESO\" two types matched normals samples. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_toil_TvsN(Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = FALSE, Show.P.label = FALSE) p <- vis_toil_TvsN(Gene = \"TP53\", Mode = \"Boxplot\", Show.P.value = FALSE, Show.P.label = FALSE) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"Visualize Gene TPM Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx))","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"","code":"vis_toil_TvsN_cancer( Gene = \"TP53\", Mode = c(\"Violinplot\", \"Dotplot\"), data_type = \"mRNA\", Show.P.value = FALSE, Show.P.label = FALSE, Method = \"wilcox.test\", values = c(\"#DF2020\", \"#DDDF21\"), TCGA.only = FALSE, Cancer = \"ACC\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Mode \"Boxplot\" \"Violinplot\" represent data data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal TCGA.include samples TCGA dataset Cancer select cancer cohort(s). opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"ggplot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"Visualize Single Gene Univariable Cox Result Toil Data Hub","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"","code":"vis_unicox_tree( Gene = \"TP53\", measure = \"OS\", data_type = \"mRNA\", use_optimal_cutoff = FALSE, values = c(\"grey\", \"#E31A1C\", \"#377DB8\"), opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). measure survival measure, e.g. \"OS\". data_type choose gene profile type, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv\" use_optimal_cutoff use surv_cutpoint survminer package thresholding samples cancer type. values color fill tumor normal opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_unicox_tree(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-220","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.2.0","title":"UCSCXenaShiny 2.2.0","text":"Added gene pathway cross-omics analysis functions/modules. Added app_run2() function custom app start lightweight modules. Fixed pdf() parameter KM plot Improved UI Custom TPC Modules. Removed mistake Yi Xiong setting problematic threshold parameter unicox analysis.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-210","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.1.0","title":"UCSCXenaShiny 2.1.0","text":"CRAN release: 2024-05-15 Handled error raised due internet issue CRAN check. Optimized data preloading Shiny application. Dockerfile updated.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-201","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.0.1","title":"UCSCXenaShiny 2.0.1","text":"Fixed minor bugs Shiny app. Updated README Docker usage. Fixed issue vis_identifier_grp_comparison() (#317).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-200","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.0.0","title":"UCSCXenaShiny 2.0.0","text":"CRAN release: 2024-03-14 See UCSCXenaShiny v2 Book comprehensive guidance.","code":""},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"datasets-2-0-0","dir":"Changelog","previous_headings":"New Features","what":"Datasets","title":"UCSCXenaShiny 2.0.0","text":"load_data(\"tcga_PW\"): ssGSEA scores HALLMARK, KEGG, IOBR terms TCGA samples. load_data(\"tcga_PW_meta\"): metadata annotation HALLMARK, KEGG, IOBR terms. load_data(\"pcawg_TIL\"): PCAWG TIL data. load_data(\"pcawg_PW\"): ssGSEA scores HALLMARK, KEGG, IOBR terms PCAWG samples. .","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"r-package-functions-2-0-0","dir":"Changelog","previous_headings":"New Features","what":"R Package Functions","title":"UCSCXenaShiny 2.0.0","text":".opt_pancan : Default setting alternative TPC datasets. mol_quick_analysis(): Quick molecule analysis report generation based TCGA dataset. query_tcga_group(): Group TPC samples build-custom phenotype support filtering merging operations. vis_dim_dist(): Visualize distribution difference TCGA samples dimensionality reduction analysis. vis_identifier_dim_dist(): Visualize distribution difference samples Molecule Identifier dimensionality reduction analysis. vis_toil_Mut(): Visualize molecular profile difference mutation wild status queried gene. vis_toil_Mut_cancer(): Visualize molecular profile difference mutation wild status queried gene Single Cancer Type","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"shiny-application-2-0-0","dir":"Changelog","previous_headings":"New Features","what":"Shiny application","title":"UCSCXenaShiny 2.0.0","text":"Homepage Added slicker gallery display page summary; Added report generation TCGA pan-cancer exploration. General Dataset Analysis Added one general dimensionality reduction analysis module. Quick TPC Analysis Added one module association analysis molecule pathway; Added one module association analysis molecule mutation; Added one module dimensionality reduction analysis. Personalized Analysis Designed personalized TPC analysis pipelines based 3 methods 3 modes. Download Added two modules exact subset integrated TPC data UCSCXena datasets.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"enhancements-2-0-0","dir":"Changelog","previous_headings":"","what":"Enhancements","title":"UCSCXenaShiny 2.0.0","text":"Supported getting flexible methylation value. Supported installing package r-universe (https://openbiox.r-universe.dev/UCSCXenaShiny). Supported alternative molecular profiling datasets quick personalized TPC analysis.","code":"UCSCXenaShiny::get_pancan_methylation_value( \"RCAN2\", rule_out = c(\"cg21115430\", \"cg19452802\"), aggr = \"Q75\" )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"bug-fixes-2-0-0","dir":"Changelog","previous_headings":"","what":"Bug Fixes","title":"UCSCXenaShiny 2.0.0","text":"Merged data unequal size pan-cancer data query gene signature (#283), fix also enhance sample names match. Test code:","code":"vis_gene_tmb_cor(\"`ZFAT-AS1` + `SNORD116-1` + SPATA31D1\", data_type = \"methylation\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-1111","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.11","title":"UCSCXenaShiny 1.1.11","text":"Fixed check warning pan-cancer radar plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-1110","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.10","title":"UCSCXenaShiny 1.1.10","text":"CRAN release: 2023-02-28 Fixed check issue due internet access (#253).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-119","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.9","title":"UCSCXenaShiny 1.1.9","text":"CRAN release: 2022-12-12 Added cancer type control PCAWG survival analysis. Added TCGA batch id MDA.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-118","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.8","title":"UCSCXenaShiny 1.1.8","text":"CRAN release: 2022-06-07 Fixed issue set mislabelled color pcawg pan-cancer analysis (#247, Thanks Tangjian Li). Fixed issue querying gene signature general analysis page (#244). Fixed issue “Radar plot “stemness” plot “ACC” tumor type” (#242).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-117","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.7","title":"UCSCXenaShiny 1.1.7","text":"CRAN release: 2022-04-13 Added option include.Tumor.control include type Set default theme flatly available. Added example generate radar plot, close #239","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-116","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.6","title":"UCSCXenaShiny 1.1.6","text":"Added description extra datasets.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-115","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.5","title":"UCSCXenaShiny 1.1.5","text":"CRAN release: 2022-01-15 Fixed survival KM plot output issue due ggsave() failure General Analysis page. (#230)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-114","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.4","title":"UCSCXenaShiny 1.1.4","text":"CRAN release: 2021-12-13 Fixed colnames changed .data.frame() querying symbol unvalid R name. (Related #234) Added informative error scatter plot General Analysis tab. (#233) Reversed default color setting groups survival analysis fit conventional color grouping (Xena). (#232, thanks feedback Enrique) Supported known science palette custom colors survival analysis Quick PanCan Analysis tab.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-113","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.3","title":"UCSCXenaShiny 1.1.3","text":"CRAN release: 2021-11-29 Data check. (#225) Fixed survival KM plot output issue due ggsave() failure. (#230)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-112","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.2","title":"UCSCXenaShiny 1.1.2","text":"CRAN release: 2021-11-17 Fixed value query gene signature purrr lambda function. Updated dataset doc. Uploaded zenodo link. Uploaded tool conda forge, user can install conda now. details, please read README file.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-111","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.1","title":"UCSCXenaShiny 1.1.1","text":"CRAN release: 2021-07-30 Updated citation. Fixed data loading bug due function scope problem (#222).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-110","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.0","title":"UCSCXenaShiny 1.1.0","text":"CRAN release: 2021-07-16 Supported uploading data files analysis. Improved user experience. Added contents README. Corrected LICENSE (package built top code GPLv3 LICENCE). Added docker image UCSCXenaShiny https://hub.docker.com/r/shixiangwang/ucscxenashiny.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-101","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.0.1","title":"UCSCXenaShiny 1.0.1","text":"CRAN release: 2021-06-23 Added package doc site link usage navbar list. Fixed bug PCAWG survival analysis (#209).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-100","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.0.0","title":"UCSCXenaShiny 1.0.0","text":"CRAN release: 2021-05-16 first stable formal version UCSCXenaShiny. refactored whole R package corresponding Shiny service. Enjoy .","code":""}]
+[{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":null,"dir":"","previous_headings":"","what":"Contributing to UCSCXenaShiny","title":"Contributing to UCSCXenaShiny","text":"outlines propose change UCSCXenaShiny. detailed info contributing , tidyverse packages, please see development contributing guide.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"fixing-typos","dir":"","previous_headings":"","what":"Fixing typos","title":"Contributing to UCSCXenaShiny","text":"Small typos grammatical errors documentation may edited directly using GitHub web interface, long changes made source file. YES: edit roxygen comment .R file R/. : edit .Rd file man/.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"prerequisites","dir":"","previous_headings":"","what":"Prerequisites","title":"Contributing to UCSCXenaShiny","text":"make substantial pull request, always file issue make sure someone team agrees ’s problem. ’ve found bug, create associated issue illustrate bug minimal reprex.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"pull-request-process","dir":"","previous_headings":"","what":"Pull request process","title":"Contributing to UCSCXenaShiny","text":"recommend create Git branch pull request (PR). Look Travis AppVeyor build status making changes. README contain badges continuous integration services used package. New code follow tidyverse style guide. can use styler package apply styles, please don’t restyle code nothing PR. use roxygen2, Markdown syntax, documentation. use testthat. Contributions test cases included easier accept. user-facing changes, add bullet top NEWS.md current development version header describing changes made followed GitHub username, links relevant issue(s)/PR(s).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"code-of-conduct","dir":"","previous_headings":"","what":"Code of Conduct","title":"Contributing to UCSCXenaShiny","text":"Please note UCSCXenaShiny project released Contributor Code Conduct. contributing project agree abide terms.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/CONTRIBUTING.html","id":"see-tidyverse-development-contributing-guide","dir":"","previous_headings":"","what":"See tidyverse development contributing guide","title":"Contributing to UCSCXenaShiny","text":"details.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":null,"dir":"","previous_headings":"","what":"GNU General Public License","title":"GNU General Public License","text":"Version 3, 29 June 2007Copyright © 2007 Free Software Foundation, Inc. Everyone permitted copy distribute verbatim copies license document, changing allowed.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"preamble","dir":"","previous_headings":"","what":"Preamble","title":"GNU General Public License","text":"GNU General Public License free, copyleft license software kinds works. licenses software practical works designed take away freedom share change works. contrast, GNU General Public License intended guarantee freedom share change versions program–make sure remains free software users. , Free Software Foundation, use GNU General Public License software; applies also work released way authors. can apply programs, . speak free software, referring freedom, price. General Public Licenses designed make sure freedom distribute copies free software (charge wish), receive source code can get want , can change software use pieces new free programs, know can things. protect rights, need prevent others denying rights asking surrender rights. Therefore, certain responsibilities distribute copies software, modify : responsibilities respect freedom others. example, distribute copies program, whether gratis fee, must pass recipients freedoms received. must make sure , , receive can get source code. must show terms know rights. 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Definitions","title":"GNU General Public License","text":"“License” refers version 3 GNU General Public License. “Copyright” also means copyright-like laws apply kinds works, semiconductor masks. “Program” refers copyrightable work licensed License. licensee addressed “”. “Licensees” “recipients” may individuals organizations. “modify” work means copy adapt part work fashion requiring copyright permission, making exact copy. resulting work called “modified version” earlier work work “based ” earlier work. “covered work” means either unmodified Program work based Program. “propagate” work means anything , without permission, make directly secondarily liable infringement applicable copyright law, except executing computer modifying private copy. Propagation includes copying, distribution (without modification), making available public, countries activities well. “convey” work means kind propagation enables parties make receive copies. 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Termination","title":"GNU General Public License","text":"may propagate modify covered work except expressly provided License. attempt otherwise propagate modify void, automatically terminate rights License (including patent licenses granted third paragraph section 11). However, cease violation License, license particular copyright holder reinstated () provisionally, unless copyright holder explicitly finally terminates license, (b) permanently, copyright holder fails notify violation reasonable means prior 60 days cessation. Moreover, license particular copyright holder reinstated permanently copyright holder notifies violation reasonable means, first time received notice violation License (work) copyright holder, cure violation prior 30 days receipt notice. 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Automatic Licensing of Downstream Recipients","title":"GNU General Public License","text":"time convey covered work, recipient automatically receives license original licensors, run, modify propagate work, subject License. responsible enforcing compliance third parties License. “entity transaction” transaction transferring control organization, substantially assets one, subdividing organization, merging organizations. propagation covered work results entity transaction, party transaction receives copy work also receives whatever licenses work party’s predecessor interest give previous paragraph, plus right possession Corresponding Source work predecessor interest, predecessor can get reasonable efforts. may impose restrictions exercise rights granted affirmed License. example, may impose license fee, royalty, charge exercise rights granted License, may initiate litigation (including cross-claim counterclaim lawsuit) alleging patent claim infringed making, using, selling, offering sale, importing Program portion .","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_11-patents","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"11. Patents","title":"GNU General Public License","text":"“contributor” copyright holder authorizes use License Program work Program based. work thus licensed called contributor’s “contributor version”. contributor’s “essential patent claims” patent claims owned controlled contributor, whether already acquired hereafter acquired, infringed manner, permitted License, making, using, selling contributor version, include claims infringed consequence modification contributor version. purposes definition, “control” includes right grant patent sublicenses manner consistent requirements License. contributor grants non-exclusive, worldwide, royalty-free patent license contributor’s essential patent claims, make, use, sell, offer sale, import otherwise run, modify propagate contents contributor version. following three paragraphs, “patent license” express agreement commitment, however denominated, enforce patent (express permission practice patent covenant sue patent infringement). “grant” patent license party means make agreement commitment enforce patent party. convey covered work, knowingly relying patent license, Corresponding Source work available anyone copy, free charge terms License, publicly available network server readily accessible means, must either (1) cause Corresponding Source available, (2) arrange deprive benefit patent license particular work, (3) arrange, manner consistent requirements License, extend patent license downstream recipients. “Knowingly relying” means actual knowledge , patent license, conveying covered work country, recipient’s use covered work country, infringe one identifiable patents country reason believe valid. , pursuant connection single transaction arrangement, convey, propagate procuring conveyance , covered work, grant patent license parties receiving covered work authorizing use, propagate, modify convey specific copy covered work, patent license grant automatically extended recipients covered work works based . patent license “discriminatory” include within scope coverage, prohibits exercise , conditioned non-exercise one rights specifically granted License. may convey covered work party arrangement third party business distributing software, make payment third party based extent activity conveying work, third party grants, parties receive covered work , discriminatory patent license () connection copies covered work conveyed (copies made copies), (b) primarily connection specific products compilations contain covered work, unless entered arrangement, patent license granted, prior 28 March 2007. Nothing License shall construed excluding limiting implied license defenses infringement may otherwise available applicable patent law.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_12-no-surrender-of-others-freedom","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"12. No Surrender of Others’ Freedom","title":"GNU General Public License","text":"conditions imposed (whether court order, agreement otherwise) contradict conditions License, excuse conditions License. convey covered work satisfy simultaneously obligations License pertinent obligations, consequence may convey . example, agree terms obligate collect royalty conveying convey Program, way satisfy terms License refrain entirely conveying Program.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_13-use-with-the-gnu-affero-general-public-license","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"13. Use with the GNU Affero General Public License","title":"GNU General Public License","text":"Notwithstanding provision License, permission link combine covered work work licensed version 3 GNU Affero General Public License single combined work, convey resulting work. terms License continue apply part covered work, special requirements GNU Affero General Public License, section 13, concerning interaction network apply combination .","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_14-revised-versions-of-this-license","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"14. Revised Versions of this License","title":"GNU General Public License","text":"Free Software Foundation may publish revised /new versions GNU General Public License time time. new versions similar spirit present version, may differ detail address new problems concerns. version given distinguishing version number. Program specifies certain numbered version GNU General Public License “later version” applies , option following terms conditions either numbered version later version published Free Software Foundation. Program specify version number GNU General Public License, may choose version ever published Free Software Foundation. Program specifies proxy can decide future versions GNU General Public License can used, proxy’s public statement acceptance version permanently authorizes choose version Program. Later license versions may give additional different permissions. However, additional obligations imposed author copyright holder result choosing follow later version.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_15-disclaimer-of-warranty","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"15. Disclaimer of Warranty","title":"GNU General Public License","text":"WARRANTY PROGRAM, EXTENT PERGPLv3TED APPLICABLE LAW. EXCEPT OTHERWISE STATED WRITING COPYRIGHT HOLDERS /PARTIES PROVIDE PROGRAM “” WITHOUT WARRANTY KIND, EITHER EXPRESSED IMPLIED, INCLUDING, LIGPLv3ED , IMPLIED WARRANTIES MERCHANTABILITY FITNESS PARTICULAR PURPOSE. ENTIRE RISK QUALITY PERFORMANCE PROGRAM . PROGRAM PROVE DEFECTIVE, ASSUME COST NECESSARY SERVICING, REPAIR CORRECTION.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_16-limitation-of-liability","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"16. Limitation of Liability","title":"GNU General Public License","text":"EVENT UNLESS REQUIRED APPLICABLE LAW AGREED WRITING COPYRIGHT HOLDER, PARTY MODIFIES /CONVEYS PROGRAM PERGPLv3TED , LIABLE DAMAGES, INCLUDING GENERAL, SPECIAL, INCIDENTAL CONSEQUENTIAL DAMAGES ARISING USE INABILITY USE PROGRAM (INCLUDING LIGPLv3ED LOSS DATA DATA RENDERED INACCURATE LOSSES SUSTAINED THIRD PARTIES FAILURE PROGRAM OPERATE PROGRAMS), EVEN HOLDER PARTY ADVISED POSSIBILITY DAMAGES.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"id_17-interpretation-of-sections-15-and-16","dir":"","previous_headings":"TERMS AND CONDITIONS","what":"17. Interpretation of Sections 15 and 16","title":"GNU General Public License","text":"disclaimer warranty limitation liability provided given local legal effect according terms, reviewing courts shall apply local law closely approximates absolute waiver civil liability connection Program, unless warranty assumption liability accompanies copy Program return fee. END TERMS CONDITIONS","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/LICENSE.html","id":"how-to-apply-these-terms-to-your-new-programs","dir":"","previous_headings":"","what":"How to Apply These Terms to Your New Programs","title":"GNU General Public License","text":"develop new program, want greatest possible use public, best way achieve make free software everyone can redistribute change terms. , attach following notices program. safest attach start source file effectively state exclusion warranty; file least “copyright” line pointer full notice found. Also add information contact electronic paper mail. program terminal interaction, make output short notice like starts interactive mode: hypothetical commands show w show c show appropriate parts General Public License. course, program’s commands might different; GUI interface, use “box”. also get employer (work programmer) school, , sign “copyright disclaimer” program, necessary. information , apply follow GNU GPL, see . GNU General Public License permit incorporating program proprietary programs. program subroutine library, may consider useful permit linking proprietary applications library. want , use GNU Lesser General Public License instead License. first, please read .","code":" Copyright (C) This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see . UCSCXenaShiny Copyright (C) 2019 Openbiox XenaShiny team This program comes with ABSOLUTELY NO WARRANTY; for details type 'show w'. This is free software, and you are welcome to redistribute it under certain conditions; type 'show c' for details."},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"tutorial-book","dir":"Articles","previous_headings":"","what":"Tutorial Book","title":"Examples of Accessible Functions","text":"UCSCXenaShiny v2, provide comprehensive tutorial book introducing use datasets, functions, Shiny application.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-data","dir":"Articles","previous_headings":"","what":"Fetch Data","title":"Examples of Accessible Functions","text":"provide function retrieve multi-dimensional data including genomic, epigenomic, transcriptomic, proteomic data TCGA (note, actually contains data TCGA/TARGET/GTEx databases) CCLE Pan-Cancer dataset single identifier (e.g., gene, protein). Check parameters: TCGA gene expression data, use Xena dataset ID TcgaTargetGtex_rsem_gene_tpm includes 19131 samples tumor tissue samples normal tissue samples. expression value unit log2(tpm+0.001). Let’s check several examples.","code":"args(query_pancan_value) #> function (molecule, data_type = c(\"mRNA\", \"transcript\", \"protein\", #> \"mutation\", \"cnv\", \"methylation\", \"miRNA\", \"fusion\", \"promoter\", #> \"APOBEC\"), database = c(\"toil\", \"ccle\", \"pcawg\"), reset_id = NULL, #> opt_pancan = .opt_pancan) #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-gene-expression","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Gene Expression","title":"Examples of Accessible Functions","text":"","code":"gene_expr <- query_pancan_value(\"TP53\") #> ========================================================================================= #> UCSCXenaTools version 1.4.8 #> Project URL: https://github.com/ropensci/UCSCXenaTools #> Usages: https://cran.r-project.org/web/packages/UCSCXenaTools/vignettes/USCSXenaTools.html #> #> If you use it in published research, please cite: #> Wang et al., (2019). The UCSCXenaTools R package: a toolkit for accessing genomics data #> from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq. #> Journal of Open Source Software, 4(40), 1627, https://doi.org/10.21105/joss.01627 #> ========================================================================================= #> --Enjoy it-- #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() str(gene_expr) #> List of 2 #> $ expression: NULL #> $ unit : chr \"log2(tpm+0.001)\""},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-transcript-expression","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Transcript Expression","title":"Examples of Accessible Functions","text":"","code":"transcript_expr <- query_pancan_value(\"ENST00000000233\", data_type = \"transcript\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-gene-cnv","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Gene CNV","title":"Examples of Accessible Functions","text":"","code":"gene_cnv <- query_pancan_value(\"TP53\", data_type = \"cnv\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-gene-mutation","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch Gene Mutation","title":"Examples of Accessible Functions","text":"","code":"gene_mut <- query_pancan_value(\"TP53\", data_type = \"mutation\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"fetch-mirna-mature-strand-expression","dir":"Articles","previous_headings":"Fetch Data","what":"Fetch miRNA mature strand expression","title":"Examples of Accessible Functions","text":"","code":"miRNA_expr <- query_pancan_value(\"hsa-let-7a-2-3p\", data_type = \"miRNA\")"},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"visualize-single-gene-expression-in-pancan-dataset","dir":"Articles","previous_headings":"Data Visualization","what":"Visualize Single Gene Expression in PANCAN Dataset","title":"Examples of Accessible Functions","text":"","code":"vis_toil_TvsN(Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = FALSE, Show.P.label = FALSE) #> Reading cache data /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() #> Warning in vis_toil_TvsN(Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = #> FALSE, : No data available #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"compare-gene-expression-level-in-single-cancer-type","dir":"Articles","previous_headings":"Data Visualization","what":"Compare Gene Expression Level in Single Cancer Type","title":"Examples of Accessible Functions","text":"","code":"vis_toil_TvsN_cancer( Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = TRUE, Show.P.label = TRUE, Method = \"wilcox.test\", values = c(\"#DF2020\", \"#DDDF21\"), TCGA.only = FALSE, Cancer = \"ACC\" ) #> Reading cache data /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() #> Warning in vis_toil_TvsN_cancer(Gene = \"TP53\", Mode = \"Violinplot\", #> Show.P.value = TRUE, : No data available #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"compare-gene-expression-level-in-different-anatomic-regions","dir":"Articles","previous_headings":"Data Visualization","what":"Compare Gene Expression Level in Different Anatomic Regions","title":"Examples of Accessible Functions","text":"function needs gganatogram package, CRAN. Please install using function. Click see output","code":"if (require(\"gganatogram\")) { vis_pancan_anatomy(Gene = \"TP53\", Gender = c(\"Female\", \"Male\"), option = \"D\") }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"visualize-relationship-between-gene-expression-and-prognosis-in-the-pancan-dataset","dir":"Articles","previous_headings":"Data Visualization","what":"Visualize Relationship between Gene Expression and Prognosis in the PANCAN Dataset","title":"Examples of Accessible Functions","text":"","code":"vis_unicox_tree( Gene = \"TP53\", measure = \"OS\", values = c(\"grey\", \"#E31A1C\", \"#377DB8\") ) #> Reading cache data /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> Try querying data #1 #> Try querying data #2 #> Try querying data #3 #> Try querying data #4 #> Try querying data #5 #> Warning in value[[3L]](cond): Tried 5 times but failed, please check URL or #> your internet connection or try it later! #> Saving data to file /tmp/RtmpL7y8pq/UCSCXenaShiny/4822f991b17cbdab3831c455be7620b2.rds #> More info about dataset please run following commands: #> library(UCSCXenaTools) #> XenaGenerate(subset = XenaDatasets == \"TcgaTargetGtex_rsem_gene_tpm\") %>% XenaBrowse() #> Warning in vis_unicox_tree(Gene = \"TP53\", measure = \"OS\", values = c(\"grey\", : #> No data available #> NULL"},{"path":"https://openbiox.github.io/UCSCXenaShiny/articles/api.html","id":"other-functions-and-data","dir":"Articles","previous_headings":"Data Visualization","what":"Other Functions and Data","title":"Examples of Accessible Functions","text":"exported data functions organized .","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/authors.html","id":null,"dir":"","previous_headings":"","what":"Authors","title":"Authors and Citation","text":"Shixiang Wang. Author, maintainer. Shensuo Li. Author. Yi Xiong. Author. Longfei Zhao. Author. Kai Gu. Author. Yin Li. Author. Fei Zhao. Author.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/authors.html","id":"citation","dir":"","previous_headings":"","what":"Citation","title":"Authors and Citation","text":"Wang S, Li S, Xiong Y, Zhao L, Gu K, Li Y, Zhao F (2024). UCSCXenaShiny: Interactive Analysis UCSC Xena Data. R package version 2.2.0, https://openbiox.github.io/UCSCXenaShiny/, https://github.com/openbiox/UCSCXenaShiny.","code":"@Manual{, title = {UCSCXenaShiny: Interactive Analysis of UCSC Xena Data}, author = {Shixiang Wang and Shensuo Li and Yi Xiong and Longfei Zhao and Kai Gu and Yin Li and Fei Zhao}, year = {2024}, note = {R package version 2.2.0, https://openbiox.github.io/UCSCXenaShiny/}, url = {https://github.com/openbiox/UCSCXenaShiny}, }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"ucscxenashiny-","dir":"","previous_headings":"","what":"Interactive Analysis of UCSC Xena Data","title":"Interactive Analysis of UCSC Xena Data","text":"UCSCXenaShiny R package interactively exploring UCSC Xena. mainly designed provide web app (built top {shiny} framework {UCSCXenaTools} package) downloading, analyzing visualizing datasets UCSC Xena. Please cite following articles used UCSCXenaShiny study: V2 Li S, et al. UCSCXenaShiny v2: Facilitating Integrative Personalized Oncology Omics Analysis. 2024 (preparation) V1 Shixiang Wang#, Yi Xiong#, Longfei Zhao#, Kai Gu#, Yin Li, Fei Zhao, Jianfeng Li, Mingjie Wang, Haitao Wang, Ziyu Tao, Tao Wu, Yichao Zheng, Xuejun Li, Xue-Song Liu, UCSCXenaShiny: R/CRAN Package Interactive Analysis UCSC Xena Data, Bioinformatics, 2021;, btab561, https://doi.org/10.1093/bioinformatics/btab561.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"cloud-use-on-cloud","dir":"","previous_headings":"","what":"☁️ Use on cloud","title":"Interactive Analysis of UCSC Xena Data","text":"don’t want install R packages locally, programming experience, try using tool Oncoharmony Network (http://shiny.zhoulab.ac.cn/UCSCXenaShiny) Hiplot ORG platform (https://shiny.hiplot.cn/ucsc-xena-shiny). deployed two additional apps: basic version V2 (https://shiny.zhoulab.ac.cn/UCSCXenaShiny_basic/) archive version V1 (https://shiny.zhoulab.ac.cn/UCSCXenaShinyV1/, code please see v1 branch).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"snake-use-with-conda","dir":"","previous_headings":"","what":"🐍 Use with Conda","title":"Interactive Analysis of UCSC Xena Data","text":"Install conda-forge channel : possible list versions r-ucscxenashiny available platform :","code":"conda install -c conda-forge r-ucscxenashiny conda search r-ucscxenashiny --channel conda-forge"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"package-use-with-docker","dir":"","previous_headings":"","what":"📦 Use with Docker","title":"Interactive Analysis of UCSC Xena Data","text":"UCSCXenaShiny corresponding docker image https://hub.docker.com/r/shixiangwang/ucscxenashiny/, can install latest version : v2, docker pull GitHub ghcr.io registry also supported, e.g., docker pull ghcr.io/openbiox/ucscxenashiny:master. versions can found https://hub.docker.com/r/shixiangwang/ucscxenashiny/tags/. use specified version (e.g., 2.0.0; latest code commit auto-build tag master), run following command install: Run latest stable docker image keep background : Now find Shiny open URL http://127.0.0.1:3838 web browser. deploy docker public (cloud) Linux server, change 127.0.0.1 host IP. first time, may return failure ‘take long time respond’, please refresh web page. application failed start. Check container installed dependencies. can interactively check container: can manage deployed container following commands:","code":"docker pull shixiangwang/ucscxenashiny docker pull shixiangwang/ucscxenashiny:2.0.0 # docker pull shixiangwang/ucscxenashiny:master # For latest code, unstable docker run -d --name xenashiny -p 3838:3838 shixiangwang/ucscxenashiny docker exec xenashiny R -e 'source(system.file(\"shinyapp/utils_pkgs.R\", package = \"UCSCXenaShiny\"))' docker exec -it xenashiny /bin/bash # Stop the container docker stop xenashiny # Start the container docker start xenashiny"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"arrow_double_down-manual-installation","dir":"","previous_headings":"","what":"⏬ Manual installation","title":"Interactive Analysis of UCSC Xena Data","text":"can install stable release UCSCXenaShiny CRAN : can install development version UCSCXenaShiny Github : r-universe: dependent R packages specific Shiny application automatically installed start app_run() command. failed install UCSCXenaShiny, please check following system dependencies properly installed see Troubleshooting section specific installation issues.","code":"install.packages(\"UCSCXenaShiny\") remotes::install_github(\"openbiox/UCSCXenaShiny\") install.packages(\"UCSCXenaShiny\", repos = c(\"https://openbiox.r-universe.dev\", \"https://cran.r-project.org\"))"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"system-dependencies-installation","dir":"","previous_headings":"⏬ Manual installation","what":"System dependencies installation","title":"Interactive Analysis of UCSC Xena Data","text":"use Windows/MacOS, please skip reading sub-section. Linux distributions diverse, test installation UCSCXenaShiny common used Ubuntu/CentOS. using Linux distributions, need solve system dependencies installation problems encounter R package installation errors. However, installation system dependencies Ubuntu/CentOS good references. Please note commands execuated root. Ubuntu: CentOS:","code":"apt update -y && apt install -y libcurl4-openssl-dev libssl-dev libxml2-dev \\ libgmp3-dev libmpfr-dev yum update -y && yum install -y libcurl-devel openssl-devel libxml2-devel \\ gmp-devel mpfr-devel libjpeg-devel cairo-devel"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"beginner-usage","dir":"","previous_headings":"","what":"🔰 Usage","title":"Interactive Analysis of UCSC Xena Data","text":"First load package: Start Shiny R console (ignore just want use functions package): want deploy UCSC Xena Shiny Shiny Server, please copy App.R www/ directory shinyapp. xena.runMode top App.R recommended set \"server\" instead \"client\" (default). advanced users, examples illustrating useful functions obtain analyze data described vignette. exported data functions organized . xena.cacheDir xena.zenodoDir two options control store data. e.g., Option xena.runMode can used control way Shiny works. can ‘client’ ‘server’. can directly set app_run().","code":"library(UCSCXenaShiny) app_run() # At default, the Shiny is running under client mode # It means the data queried from remote UCSC Xena server will # be saved to temporary directory determined by R # If you frequently use this tool or deploy this tool as a web service for multiple users # It is recommended to run it with 'server' mode # i.e., # # app_run(\"server\") xena.cacheDir = \"/xena\" xena.zenodoDir = \"/xena/datasets\" options(xena.cacheDir = xena.cacheDir, xena.zenodoDir = xena.zenodoDir) options(xena.runMode = \"server\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"movie_camera-videos","dir":"","previous_headings":"","what":"🎥 Videos","title":"Interactive Analysis of UCSC Xena Data","text":"Home page: https://www.bilibili.com/video/bv1R84y1F7WT. Repository page: https://www.bilibili.com/video/bv1Mq4y1J73o. General Analysis page: https://www.bilibili.com/video/bv1p64y1U7iU. Quick PanCan Analysis page: https://www.bilibili.com/video/bv1o64y1y7jW. Genomic Signature: https://www.bilibili.com/video/bv1zB4y1c7eB. Upload custom data general analysis: https://www.bilibili.com/video/BV1pf4y1j7eP. Please note upload files must format csv/tsv (gz compression supported) files must extension tsv/txt/csv/gz.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"hammer_and_wrench-troubleshooting","dir":"","previous_headings":"","what":"🛠️ Troubleshooting","title":"Interactive Analysis of UCSC Xena Data","text":"ERROR: dependencies ‘gmp’, ‘Rmpfr’ available package ‘PMCMRplus’ ERROR: dependency ‘pairwiseComparisons’ available package ‘ggstatsplot’. operating system lacks gmp Rmpfr development libraries. installation package ‘gridtext’ non-zero exit status error info grid-renderer.h:61:94: error: matching function call ‘Rcpp::Vector<10, Rcpp::PreserveStorage>::Vector(int, bool&, const GraphicsContext&)’. older C++ version support C++11 features. error seems happen CentOS. Install newer C++ set default compiler R fix problem. Append content openning file. installation package ‘nloptr’ non-zero exit status error info libtool: link: ERROR: information variable 'AR' cru. latest version nloptr can support R>=4.0. using R3.6 issue. install older version R console can fix . Reference: https://stackoverflow.com/questions/62900525/install-lme4--cran--ubuntu package ‘pacman’ available similar. Install hand R console. package called ‘shinythemes’ similar. Install hand R cosole. Install package gganatogram failed similar. Install hand R cosole. Install package ggradar failed similar. Install hand R cosole.","code":"# Ubuntu apt install -y libgmp3-dev libmpfr-dev # CentOS yum install -y gmp-devel mpfr-devel yum install centos-release-scl yum install devtoolset-9 # If you use your non-root account to install packages, # change /root to /home/your_id in the following command mkdir -p /root/.R vi /root/.R/Makevars CXX11=/opt/rh/devtoolset-9/root/usr/bin/g++ -std=c++11 packageurl <- \"https://cran.r-project.org/src/contrib/Archive/nloptr/nloptr_1.2.1.tar.gz\" install.packages(packageurl, repos=NULL, type=\"source\") install.packages(\"pacman\") install.packages(\"shinythemes\") if (!requireNamespace(\"gganatogram\")) { library(remotes) tryCatch( remotes::install_github(\"jespermaag/gganatogram\"), error = function(e) { remotes::install_git(\"https://gitee.com/XenaShiny/gganatogram\") } ) } if (!requireNamespace(\"ggradar\")) { library(remotes) tryCatch( remotes::install_github(\"ricardo-bion/ggradar\"), error = function(e) { remotes::install_git(\"https://gitee.com/XenaShiny/ggradar\") } ) }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"writing_hand-author","dir":"","previous_headings":"","what":"✍️ Author","title":"Interactive Analysis of UCSC Xena Data","text":"Shixiang Wang Yi Xiong Shensuo Li Longfei Zhao Kai Gu Yuzhong Peng Yin Li Fei Zhao","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/index.html","id":"page_with_curl-license","dir":"","previous_headings":"","what":"📃 LICENSE","title":"Interactive Analysis of UCSC Xena Data","text":"GPLv3 © Openbiox","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/TCGA.organ.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: Organ Data — TCGA.organ","title":"TCGA: Organ Data — TCGA.organ","text":"TCGA: Organ Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/TCGA.organ.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: Organ Data — TCGA.organ","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/TCGA.organ.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: Organ Data — TCGA.organ","text":"","code":"data(\"TCGA.organ\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/UCSCXenaShiny-package.html","id":null,"dir":"Reference","previous_headings":"","what":"Xena Shiny App — UCSCXenaShiny-package","title":"Xena Shiny App — UCSCXenaShiny-package","text":"Shiny App UCSC Xena Data Hubs. See https://github.com/openbiox/UCSCXenaShiny details.","code":""},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/UCSCXenaShiny-package.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Xena Shiny App — UCSCXenaShiny-package","text":"Maintainer: Shixiang Wang w_shixiang@163.com (ORCID) Authors: Shensuo Li lishensuo@163.com Yi Xiong neuroxiong@openbiox.com (ORCID) Longfei Zhao longfei8533@126.com (ORCID) Kai Gu gukai1212@163.com (ORCID) Yin Li yinli18@fudan.edu.cn Fei Zhao zhaofei415@mails.ucas.edu.cn","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":null,"dir":"Reference","previous_headings":"","what":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"Analyze partial correlation gene-drug association controlling tissue average expression.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"","code":"analyze_gene_drug_response_asso(gene_list, combine = FALSE)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"gene_list gene symbol list. combine TRUE, combine expression gene list gene signature.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"data.frame combine TRUE, genes combined signature. mean.diff median.diff indicate mean median normalized expression difference High IC50 cells Low IC50 cells. cutoff High Low median IC50.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_asso.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Analyze Association between Gene (Signature) and Drug Response with CCLE Data — analyze_gene_drug_response_asso","text":"","code":"if (FALSE) { # \\dontrun{ analyze_gene_drug_response_asso(\"TP53\") analyze_gene_drug_response_asso(c(\"TP53\", \"KRAS\")) analyze_gene_drug_response_asso(c(\"TP53\", \"KRAS\"), combine = TRUE) # Visualization vis_gene_drug_response_asso(\"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":null,"dir":"Reference","previous_headings":"","what":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"Analyze Difference Drug Response (IC50 Value (uM)) Gene (Signature) High Low Expression CCLE Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"","code":"analyze_gene_drug_response_diff( gene_list, drug = \"ALL\", tissue = \"ALL\", combine = FALSE, cutpoint = c(50, 50) )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"gene_list gene symbol list. drug drug name. Check examples. tissue tissue name. Check examples. combine TRUE, combine expression gene list gene signature. cutpoint cut point (percent) High Low group, default c(50, 50).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"data.frame.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/analyze_gene_drug_response_diff.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Analyze Difference of Drug Response (IC50 Value (uM)) between Gene (Signature) High and Low Expression with CCLE Data — analyze_gene_drug_response_diff","text":"","code":"tissue_list <- c( \"prostate\", \"central_nervous_system\", \"urinary_tract\", \"haematopoietic_and_lymphoid_tissue\", \"kidney\", \"thyroid\", \"soft_tissue\", \"skin\", \"salivary_gland\", \"ovary\", \"lung\", \"bone\", \"endometrium\", \"pancreas\", \"breast\", \"large_intestine\", \"upper_aerodigestive_tract\", \"autonomic_ganglia\", \"stomach\", \"liver\", \"biliary_tract\", \"pleura\", \"oesophagus\" ) drug_list <- c( \"AEW541\", \"Nilotinib\", \"17-AAG\", \"PHA-665752\", \"Lapatinib\", \"Nutlin-3\", \"AZD0530\", \"PF2341066\", \"L-685458\", \"ZD-6474\", \"Panobinostat\", \"Sorafenib\", \"Irinotecan\", \"Topotecan\", \"LBW242\", \"PD-0325901\", \"PD-0332991\", \"Paclitaxel\", \"AZD6244\", \"PLX4720\", \"RAF265\", \"TAE684\", \"TKI258\", \"Erlotinib\" ) target_list <- c( \"IGF1R\", \"ABL\", \"HSP90\", \"c-MET\", \"EGFR\", \"MDM2\", \"GS\", \"HDAC\", \"RTK\", \"TOP1\", \"XIAP\", \"MEK\", \"CDK4\", \"TUBB1\", \"RAF\", \"ALK\", \"FGFR\" ) if (FALSE) { # \\dontrun{ analyze_gene_drug_response_diff(\"TP53\") analyze_gene_drug_response_diff(c(\"TP53\", \"KRAS\"), drug = \"AEW541\") analyze_gene_drug_response_diff(c(\"TP53\", \"KRAS\"), tissue = \"kidney\", combine = TRUE ) # Visualization vis_gene_drug_response_diff(\"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":null,"dir":"Reference","previous_headings":"","what":"Run UCSC Xena Shiny App — app_run","title":"Run UCSC Xena Shiny App — app_run","text":"Run UCSC Xena Shiny App","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run UCSC Xena Shiny App — app_run","text":"","code":"app_run(runMode = \"client\", port = getOption(\"shiny.port\"))"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run UCSC Xena Shiny App — app_run","text":"runMode default 'client' personal user, set 'server' running server. port TCP port application listen . port specified, shiny.port option set (options(shiny.port = XX)), port used. Otherwise, use random port 3000:8000, excluding ports blocked Google Chrome considered unsafe: 3659, 4045, 5060, 5061, 6000, 6566, 6665:6669 6697. twenty random ports tried.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Run UCSC Xena Shiny App — app_run","text":"","code":"if (FALSE) { # \\dontrun{ app_run() } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":null,"dir":"Reference","previous_headings":"","what":"Run UCSC Xena Shiny App with specifc content — app_run2","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"Run UCSC Xena Shiny App specifc content","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"","code":"app_run2( runMode = \"client\", port = getOption(\"shiny.port\"), content = c(\"a\", \"s\", \"q\", \"p\", \"d\") )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"runMode default 'client' personal user, set 'server' running server. port TCP port application listen . port specified, shiny.port option set (options(shiny.port = XX)), port used. Otherwise, use random port 3000:8000, excluding ports blocked Google Chrome considered unsafe: 3659, 4045, 5060, 5061, 6000, 6566, 6665:6669 6697. twenty random ports tried. content Modules enable. : modules s: loading basic modules; q: add tpc (TCGA, PCAWG, CCLE) modules p: add tpc pipelines d: add pharmcogenomics modules","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/app_run2.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Run UCSC Xena Shiny App with specifc content — app_run2","text":"","code":"if (FALSE) { # \\dontrun{ app_run2(content = \"s\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":null,"dir":"Reference","previous_headings":"","what":"Show Available Hosts — available_hosts","title":"Show Available Hosts — available_hosts","text":"Show Available Hosts","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Show Available Hosts — available_hosts","text":"","code":"available_hosts()"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Show Available Hosts — available_hosts","text":"hosts","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/available_hosts.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Show Available Hosts — available_hosts","text":"","code":"available_hosts() #> [1] \"publicHub\" \"tcgaHub\" \"gdcHub\" \"icgcHub\" #> [5] \"toilHub\" \"pancanAtlasHub\" \"treehouseHub\" \"pcawgHub\" #> [9] \"atacseqHub\" \"singlecellHub\" \"kidsfirstHub\""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/calc_pw_mut_cnv.html","id":null,"dir":"Reference","previous_headings":"","what":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","title":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","text":"Prepare Mut/CNV data pathways given specific samples","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/calc_pw_mut_cnv.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","text":"","code":"calc_pw_mut_cnv(tumor_samples = NULL)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/calc_pw_mut_cnv.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Prepare Mut/CNV data of pathways given specific samples — calc_pw_mut_cnv","text":"tumor_samples Select specific tumor samples. Default NULL, indicating tumor samples.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":null,"dir":"Reference","previous_headings":"","what":"ABSOLUTE Result of CCLE Database — ccle_absolute","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"ABSOLUTE Result CCLE Database","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"see \"data_source\" attribute.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_absolute.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"ABSOLUTE Result of CCLE Database — ccle_absolute","text":"","code":"data(\"ccle_absolute\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":null,"dir":"Reference","previous_headings":"","what":"Phenotype Info of CCLE Database — ccle_info","title":"Phenotype Info of CCLE Database — ccle_info","text":"Phenotype Info CCLE Database","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Phenotype Info of CCLE Database — ccle_info","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Phenotype Info of CCLE Database — ccle_info","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Phenotype Info of CCLE Database — ccle_info","text":"","code":"data(\"ccle_info\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":null,"dir":"Reference","previous_headings":"","what":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"Cleaned Phenotype Info CCLE Database grouping","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ccle_info_fine.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Cleaned Phenotype Info of CCLE Database for grouping — ccle_info_fine","text":"","code":"data(\"ccle_info_fine\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/dot-opt_pancan.html","id":null,"dir":"Reference","previous_headings":"","what":"A default setting for pan-cancer studies — .opt_pancan","title":"A default setting for pan-cancer studies — .opt_pancan","text":"default setting pan-cancer studies","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/dot-opt_pancan.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"A default setting for pan-cancer studies — .opt_pancan","text":"","code":".opt_pancan"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/dot-opt_pancan.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"A default setting for pan-cancer studies — .opt_pancan","text":"object class list length 16.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":null,"dir":"Reference","previous_headings":"","what":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"Run Correlation Two Variables Support Group Variable","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"","code":"ezcor( data = NULL, split = FALSE, split_var = NULL, var1 = NULL, var2 = NULL, cor_method = \"pearson\", adjust_method = \"none\", use = \"complete\", sig_label = TRUE, verbose = TRUE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"data data.frame containing variables split whether perform correlation grouped variable, default 'FALSE' split_var character, group variable var1 character, first variable correlation var2 character, second variable correlation cor_method method=\"pearson\" default value. alternatives passed cor \"spearman\" \"kendall\" adjust_method adjustment multiple tests used? (\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\") use use=\"pairwise\" pairwise deletion cases. use=\"complete\" select just complete cases sig_label whether add symbal significance. P < 0.001,***; P < 0.01,**; P < 0.05,*; P >=0.05,\"\" verbose TRUE, print extra info.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Run Correlation between Two Variables and Support Group by a Variable — ezcor","text":"Yi Xiong","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":null,"dir":"Reference","previous_headings":"","what":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"Run correlation two variables batch mode support group variable","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"","code":"ezcor_batch( data, var1, var2, split = FALSE, split_var = NULL, cor_method = \"pearson\", adjust_method = \"none\", use = \"complete\", sig_label = TRUE, parallel = FALSE, verbose = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"data data.frame containing variables var1 character, first variable correlation var2 character, second variable correlation split whether perform correlation grouped variable, default 'FALSE' split_var character, group variable cor_method method=\"pearson\" default value. alternatives passed cor \"spearman\" \"kendall\" adjust_method adjustment multiple tests used? (\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\") use use=\"pairwise\" pairwise deletion cases. use=\"complete\" select just complete cases sig_label whether add symbal significance. P < 0.001,***; P < 0.01,**; P < 0.05,*; P >=0.05,\"\" parallel TRUE, parallel computation furrr package. verbose TRUE, print extra info.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_batch.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Run correlation between two variables in a batch mode and support group by a variable — ezcor_batch","text":"Yi Xiong, Shixiang Wang","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Run partial correlation — ezcor_partial_cor","title":"Run partial correlation — ezcor_partial_cor","text":"Run partial correlation","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Run partial correlation — ezcor_partial_cor","text":"","code":"ezcor_partial_cor( data = NULL, split = FALSE, split_var = NULL, var1 = NULL, var2 = NULL, var3 = NULL, cor_method = \"pearson\", sig_label = TRUE, ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Run partial correlation — ezcor_partial_cor","text":"data data.frame containing variables split whether perform correlation grouped variable, default 'FALSE' split_var character, group variable var1 character, first variable correlation var2 character, second variable correlation var3 character character vector, third variable correlation cor_method method=\"pearson\" default value. alternatives passed cor \"spearman\" \"kendall\" sig_label whether add symbal significance. P < 0.001,\"\"; P < 0.01,\"\"; P < 0.05,\"\"; P >=0.05,\"\" ... arguments passed methods","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Run partial correlation — ezcor_partial_cor","text":"data.frame","code":""},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/ezcor_partial_cor.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Run partial correlation — ezcor_partial_cor","text":"Yi Xiong","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"Identifier includes gene/probe etc.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"","code":"get_ccle_cn_value(identifier) get_ccle_gene_value(identifier, norm = c(\"rpkm\", \"nc\")) get_ccle_protein_value(identifier) get_ccle_mutation_status(identifier) get_pancan_value( identifier, subtype = NULL, dataset = NULL, host = available_hosts(), samples = NULL, ... ) get_pancan_gene_value(identifier, norm = c(\"tpm\", \"fpkm\", \"nc\")) get_pancan_transcript_value(identifier, norm = c(\"tpm\", \"fpkm\", \"isopct\")) get_pancan_protein_value(identifier) get_pancan_mutation_status(identifier) get_pancan_cn_value(identifier, gistic2 = TRUE, use_thresholded_data = FALSE) get_pancan_methylation_value( identifier, type = c(\"450K\", \"27K\"), rule_out = NULL, aggr = c(\"NA\", \"mean\", \"Q0\", \"Q25\", \"Q50\", \"Q75\", \"Q100\") ) get_pancan_miRNA_value(identifier) get_pcawg_gene_value(identifier) get_pcawg_fusion_value(identifier) get_pcawg_promoter_value(identifier, type = c(\"raw\", \"relative\", \"outlier\")) get_pcawg_miRNA_value(identifier, norm = c(\"TMM\", \"UQ\")) get_pcawg_APOBEC_mutagenesis_value( identifier = c(\"tCa_MutLoad_MinEstimate\", \"APOBECtCa_enrich\", \"A3A_or_A3B\", \"APOBEC_tCa_enrich_quartile\", \"APOBECrtCa_enrich\", \"APOBECytCa_enrich\", \"APOBECytCa_enrich-APOBECrtCa_enrich\", \"BH_Fisher_p-value_tCa\", \"ntca+tgan\", \"rtCa_to_G+rtCa_to_T\", \"rtca+tgay\", \"tCa_to_G+tCa_to_T\", \"ytCa_rtCa_BH_Fisher_p-value\", \"ytCa_rtCa_Fisher_p-value\", \"ytCa_to_G+ytCa_to_T\", \"ytca+tgar\") )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"identifier length-1 character representing gene symbol, ensembl gene id, probe id. Gene symbol highly recommended. norm normalization method. subtype length-1 chracter representing regular expression matching DataSubtype column UCSCXenaTools::XenaData. dataset length-1 chracter representing regular expression matching XenaDatasets UCSCXenaTools::XenaData. host character vector representing host name(s), e.g. \"toilHub\". samples character vector representing samples want returned. ... parameters. gistic2 TRUE (default), use GISTIC2 data. use_thresholded_data TRUE, use GISTIC2-thresholded value. type methylation type, one \"450K\" \"27K\". function get_pcawg_promoter_value, can one \"raw\", \"relative\", \"outlier\". rule_out methylation sites rule analyzing. aggr apporaches aggregate methylation data, default 'NA', case, mean value obtained gene-level methylation. Allowed value one c(\"NA\", \"mean\", \"Q0\", \"Q25\", \"Q50\", \"Q75\", \"Q100\"). , Q50 median.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"named vector list.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"functions","dir":"Reference","previous_headings":"","what":"Functions","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"get_ccle_cn_value(): Fetch copy number value CCLE dataset get_ccle_gene_value(): Fetch gene expression value CCLE dataset get_ccle_protein_value(): Fetch gene protein expression value CCLE dataset get_ccle_mutation_status(): Fetch gene mutation info CCLE dataset get_pancan_value(): Fetch identifier value pan-cancer dataset get_pancan_gene_value(): Fetch gene expression value pan-cancer dataset get_pancan_transcript_value(): Fetch gene transcript expression value pan-cancer dataset get_pancan_protein_value(): Fetch protein expression value pan-cancer dataset get_pancan_mutation_status(): Fetch mutation status value pan-cancer dataset get_pancan_cn_value(): Fetch gene copy number value pan-cancer dataset processed GISTIC 2.0 get_pancan_methylation_value(): Fetch gene expression value CCLE dataset get_pancan_miRNA_value(): Fetch miRNA expression value pan-cancer dataset get_pcawg_gene_value(): Fetch specimen-level gene expression value PCAWG cohort get_pcawg_fusion_value(): Fetch specimen-level gene fusion value PCAWG cohort get_pcawg_promoter_value(): Fetch specimen-level gene promoter activity value PCAWG cohort get_pcawg_miRNA_value(): Fetch specimen-level miRNA value PCAWG cohort get_pcawg_APOBEC_mutagenesis_value(): Fetch specimen-level gene fusion value PCAWG cohort","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/get_pancan_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Fetch Identifier Value from Pan-cancer Dataset — get_ccle_cn_value","text":"","code":"if (FALSE) { # \\dontrun{ # Fetch TP53 expression value from pan-cancer dataset t1 <- get_pancan_value(\"TP53\", dataset = \"TcgaTargetGtex_rsem_isoform_tpm\", host = \"toilHub\" ) t2 <- get_pancan_gene_value(\"TP53\") t3 <- get_pancan_protein_value(\"AKT\") t4 <- get_pancan_mutation_status(\"TP53\") t5 <- get_pancan_cn_value(\"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":null,"dir":"Reference","previous_headings":"","what":"Keep Only Columns Used for Sample Selection — keep_cat_cols","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"Keep Columns Used Sample Selection","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"","code":"keep_cat_cols(x, keep_sam_cols = TRUE, return_idx = TRUE)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"x data.frame many columns. keep_sam_cols TRUE (default), keep columns pattern 'sample', 'patient', etc. return_idx TRUE (default), return index 5 () columns, useful Shiny.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/keep_cat_cols.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Keep Only Columns Used for Sample Selection — keep_cat_cols","text":"data.frame list.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":null,"dir":"Reference","previous_headings":"","what":"Load Dataset Provided by This Package — load_data","title":"Load Dataset Provided by This Package — load_data","text":"Load data builtin Zenodo. Option xena.zenodoDir can used set default path storing extra data Zenodo, e.g., options(xena.zenodoDir = \"/home/xxx/dataset\").","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Load Dataset Provided by This Package — load_data","text":"","code":"load_data(name)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Load Dataset Provided by This Package — load_data","text":"name dataset name. one Builtin datasets: ccle_absolute: CCLE ABSOLUTE result. ccle_info: CCLE information. ccle_info_fine: cleaned CCLE information TPC analysis. pcawg_info: PCAWG information. pcawg_info_fine: cleaned PCAWG information TPC analysis. pcawg_purity: PCAWG tumor purity, ploidy WGD data. tcga_clinical: TCGA clinical data. tcga_clinical_fine: cleaned TCGA information TPC analysis. tcga_genome_instability: TCGA genome instability data. tcga_gtex: TCGA GTEX sample info. tcga_purity: TCGA tumor purity data. tcga_subtypes: TCGA subtypes data. tcga_surv: TCGA survival data. TCGA.organ: TCGA organ data. toil_info: Toil hub information. Remote datasets stored Zenodo: pcawg_promoter_id: PCAWG promoter identifiers. transcript_identifier: Common transcript identifiers. ccle_expr_and_drug_response: CCLE expression drug response data. ccle_drug_response_extend: CCLE drug response extended data. pancan_MSI: Pan-cancer MSI data. tcga_chr_alteration: TCGA chromosome alteration data. tcga_MSI: TCGA MSI data. tcga_pan_immune_signature: TCGA pan-cancer immune signature. tcga_stemness: TCGA tumor stemness data. tcga_TIL: TCGA TIL data. tcga_PW: ssGSEA scores HALLMARK, KEGG, IOBR terms TCGA samples. tcga_PW_meta: metadata annotation HALLMARK, KEGG, IOBR terms. tcga_tmb: TCGA TMB data. tcga_armcalls: TCGA arm alteration calls Aneuploidy data. tcga_dna_repair: TCGA DNA repair data. pancancer_conserved_immune_subtype: Pan-cancer conserved immune subtypes. pcawg_TIL: PCAWG TIL data. pcawg_PW: ssGSEA scores HALLMARK, KEGG, IOBR terms PCAWG samples. ...","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Load Dataset Provided by This Package — load_data","text":"dataset, typically data.frame.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/load_data.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Load Dataset Provided by This Package — load_data","text":"","code":"data1 <- load_data(\"tcga_surv\") data1 #> sample OS OS.time DSS DSS.time DFI DFI.time PFI PFI.time #> 1 TCGA-OR-A5J1-01 1 1355 1 1355 1 754 1 754 #> 2 TCGA-OR-A5J2-01 1 1677 1 1677 NA NA 1 289 #> 3 TCGA-OR-A5J3-01 0 2091 0 2091 1 53 1 53 #> 4 TCGA-OR-A5J5-01 1 365 1 365 NA NA 1 50 #> 5 TCGA-OR-A5J6-01 0 2703 0 2703 0 2703 0 2703 #> 6 TCGA-OR-A5J7-01 1 490 1 490 NA NA 1 162 #> 7 TCGA-OR-A5J8-01 1 579 1 579 1 530 1 530 #> 8 TCGA-OR-A5J9-01 0 1352 0 1352 1 414 1 414 #> 9 TCGA-OR-A5JA-01 1 922 1 922 NA NA 1 922 #> 10 TCGA-OR-A5JB-01 1 551 NA 551 NA NA 0 551 #> 11 TCGA-OR-A5JC-01 1 1750 NA 1750 NA NA 0 1750 #> 12 TCGA-OR-A5JD-01 0 3038 0 3038 0 3038 0 3038 #> 13 TCGA-OR-A5JE-01 1 2105 1 2105 NA NA 1 477 #> 14 TCGA-OR-A5JF-01 0 2015 0 2015 0 2015 0 2015 #> 15 TCGA-OR-A5JG-01 1 541 1 541 NA NA 1 541 #> 16 TCGA-OR-A5JI-01 0 2331 0 2331 0 2331 0 2331 #> 17 TCGA-OR-A5JJ-01 1 490 1 490 NA NA 1 490 #> 18 TCGA-OR-A5JK-01 0 1497 0 1497 NA NA 0 1497 #> 19 TCGA-OR-A5JL-01 0 2056 0 2056 0 2056 0 2056 #> 20 TCGA-OR-A5JM-01 1 562 1 562 NA NA 1 72 #> 21 TCGA-OR-A5JO-01 0 1194 0 1194 0 1194 0 1194 #> 22 TCGA-OR-A5JP-01 0 464 0 464 0 464 0 464 #> 23 TCGA-OR-A5JQ-01 0 1103 0 1103 0 1103 0 1103 #> 24 TCGA-OR-A5JR-01 0 3688 0 3688 0 3688 0 3688 #> 25 TCGA-OR-A5JS-01 0 383 0 383 NA NA 1 166 #> 26 TCGA-OR-A5JT-01 0 907 0 907 NA NA 0 907 #> 27 TCGA-OR-A5JV-01 0 2023 0 2023 0 2023 1 953 #> 28 TCGA-OR-A5JW-01 0 2202 0 2202 0 2202 0 2202 #> 29 TCGA-OR-A5JX-01 0 950 0 950 NA NA 0 950 #> 30 TCGA-OR-A5JY-01 1 552 1 552 NA NA 1 75 #> 31 TCGA-OR-A5JZ-01 0 822 0 822 NA NA 1 247 #> 32 TCGA-OR-A5K0-01 0 1029 0 1029 NA NA 1 659 #> 33 TCGA-OR-A5K1-01 0 3289 0 3289 1 826 1 826 #> 34 TCGA-OR-A5K3-01 0 3465 0 3465 0 3465 0 3465 #> 35 TCGA-OR-A5K4-01 0 1082 0 1082 0 1082 0 1082 #> 36 TCGA-OR-A5K5-01 1 498 1 498 NA NA 1 108 #> 37 TCGA-OR-A5K6-01 0 1493 0 1493 1 391 1 391 #> 38 TCGA-OR-A5K8-01 0 749 0 749 0 749 0 749 #> 39 TCGA-OR-A5K9-01 1 344 1 344 NA NA 1 236 #> 40 TCGA-OR-A5KO-01 0 1414 0 1414 NA NA 1 541 #> 41 TCGA-OR-A5KT-01 0 2895 0 2895 1 2099 1 2099 #> 42 TCGA-OR-A5KU-01 0 4673 0 4673 0 4673 0 4673 #> 43 TCGA-OR-A5KV-01 0 3878 0 3878 1 1116 1 1116 #> 44 TCGA-OR-A5KW-01 0 2076 0 2076 0 2076 0 2076 #> 45 TCGA-OR-A5KX-01 0 1364 0 1364 NA NA 1 62 #> 46 TCGA-OR-A5KY-01 1 391 1 391 NA NA 1 178 #> 47 TCGA-OR-A5KZ-01 1 125 1 125 NA NA 1 36 #> 48 TCGA-OR-A5L3-01 0 4628 0 4628 0 4628 0 4628 #> 49 TCGA-OR-A5L4-01 0 967 0 967 0 967 0 967 #> 50 TCGA-OR-A5L5-01 0 1317 0 1317 0 1317 0 1317 #> 51 TCGA-OR-A5L6-01 0 861 0 861 0 861 0 861 #> 52 TCGA-OR-A5L8-01 0 885 0 885 0 885 0 885 #> 53 TCGA-OR-A5L9-01 0 871 0 871 0 871 0 871 #> 54 TCGA-OR-A5LA-01 0 719 0 719 0 719 0 719 #> 55 TCGA-OR-A5LB-01 1 1204 1 1204 NA NA 1 611 #> 56 TCGA-OR-A5LC-01 1 159 1 159 NA NA 1 50 #> 57 TCGA-OR-A5LD-01 1 1197 1 1197 NA NA 1 444 #> 58 TCGA-OR-A5LE-01 1 662 1 662 NA NA 1 265 #> 59 TCGA-OR-A5LG-01 0 1589 0 1589 1 1393 1 1393 #> 60 TCGA-OR-A5LH-01 1 2385 1 2385 NA NA 1 2385 #> 61 TCGA-OR-A5LJ-01 1 1105 1 1105 NA NA 1 98 #> 62 TCGA-OR-A5LK-01 0 2740 0 2740 0 2740 0 2740 #> 63 TCGA-OR-A5LL-01 1 1613 1 1613 1 213 1 213 #> 64 TCGA-OR-A5LM-01 0 1858 0 1858 0 1858 0 1858 #> 65 TCGA-OR-A5LN-01 0 2342 0 2342 0 2342 0 2342 #> 66 TCGA-OR-A5LO-01 1 2405 1 2405 1 153 1 153 #> 67 TCGA-OR-A5LP-01 0 1857 0 1857 0 1857 0 1857 #> 68 TCGA-OR-A5LS-01 0 1096 0 1096 0 1096 0 1096 #> 69 TCGA-OR-A5LT-01 0 549 0 549 0 549 0 549 #> 70 TCGA-OU-A5PI-01 0 1171 0 1171 NA NA 1 351 #> 71 TCGA-P6-A5OF-01 1 207 1 207 NA NA 1 143 #> 72 TCGA-P6-A5OG-01 1 383 1 383 NA NA 1 11 #> 73 TCGA-PA-A5YG-01 0 756 0 756 0 756 0 756 #> 74 TCGA-PK-A5H8-01 0 3623 0 3623 0 3623 0 3623 #> 75 TCGA-PK-A5H9-01 0 616 0 616 0 616 0 616 #> 76 TCGA-PK-A5HA-01 0 1201 0 1201 0 1201 0 1201 #> 77 TCGA-PK-A5HB-01 0 1293 0 1293 NA NA 1 213 #> 78 TCGA-2F-A9KO-01 1 734 1 734 NA NA 1 651 #> 79 TCGA-2F-A9KP-01 1 364 1 364 NA NA 1 343 #> 80 TCGA-2F-A9KQ-01 0 2886 0 2886 0 2886 0 2886 #> 81 TCGA-2F-A9KR-01 1 3183 1 3183 1 3086 1 3086 #> 82 TCGA-2F-A9KT-01 0 3314 0 3314 0 3314 0 3314 #> 83 TCGA-2F-A9KW-01 1 254 1 254 NA NA 1 85 #> 84 TCGA-4Z-AA7M-01 0 495 0 495 0 495 0 495 #> 85 TCGA-4Z-AA7N-01 1 1367 0 1367 0 1367 0 1367 #> 86 TCGA-4Z-AA7O-01 0 512 0 512 0 512 0 512 #> 87 TCGA-4Z-AA7Q-01 1 510 0 510 NA NA 0 510 #> 88 TCGA-4Z-AA7R-01 1 522 1 522 NA NA 1 353 #> 89 TCGA-4Z-AA7S-01 1 1064 0 1064 NA NA 0 1064 #> 90 TCGA-4Z-AA7W-01 0 840 0 840 1 760 1 760 #> 91 TCGA-4Z-AA7Y-01 0 1522 0 1522 0 1522 0 1522 #> 92 TCGA-4Z-AA80-01 1 19 0 19 NA NA 0 19 #> 93 TCGA-4Z-AA81-01 1 1270 0 1270 0 1270 0 1270 #> 94 TCGA-4Z-AA82-01 1 1556 1 1556 NA NA 1 1150 #> 95 TCGA-4Z-AA83-01 0 2024 0 2024 0 2024 0 2024 #> 96 TCGA-4Z-AA84-01 0 460 0 460 NA NA 0 460 #> 97 TCGA-4Z-AA86-01 1 311 1 311 NA NA 1 136 #> 98 TCGA-4Z-AA87-01 0 1454 0 1454 NA NA 1 221 #> 99 TCGA-4Z-AA89-01 0 1029 0 1029 NA NA 1 648 #> 100 TCGA-5N-A9KI-01 1 76 0 76 0 76 0 76 #> 101 TCGA-5N-A9KM-01 1 530 1 530 1 276 1 276 #> 102 TCGA-BL-A0C8-01 0 1219 0 1219 1 630 1 630 #> 103 TCGA-BL-A13I-01 1 223 1 223 NA NA 1 216 #> 104 TCGA-BL-A13J-01 1 81 1 81 NA NA 1 81 #> 105 TCGA-BL-A13J-11 1 81 1 81 NA NA 1 81 #> 106 TCGA-BL-A3JM-01 1 205 1 205 NA NA 1 111 #> 107 TCGA-BL-A5ZZ-01 0 377 0 377 1 242 1 242 #> 108 TCGA-BT-A0S7-01 1 200 1 200 NA NA 1 200 #> 109 TCGA-BT-A0YX-01 1 400 1 400 NA NA 1 326 #> 110 TCGA-BT-A20J-01 1 579 1 579 NA NA 1 254 #> 111 TCGA-BT-A20N-01 1 795 1 795 NA NA 1 795 #> 112 TCGA-BT-A20N-11 1 795 1 795 NA NA 1 795 #> 113 TCGA-BT-A20O-01 1 370 1 370 NA NA 1 315 #> 114 TCGA-BT-A20P-01 1 544 NA 544 NA NA 0 544 #> 115 TCGA-BT-A20Q-01 1 593 1 593 NA NA 1 593 #> 116 TCGA-BT-A20Q-11 1 593 1 593 NA NA 1 593 #> 117 TCGA-BT-A20R-01 1 154 NA 154 NA NA 0 154 #> 118 TCGA-BT-A20R-11 1 154 NA 154 NA NA 0 154 #> 119 TCGA-BT-A20T-01 1 453 1 453 NA NA 1 314 #> 120 TCGA-BT-A20U-01 1 455 0 455 0 455 0 455 #> 121 TCGA-BT-A20U-11 1 455 0 455 0 455 0 455 #> 122 TCGA-BT-A20V-01 1 154 NA 154 NA NA 0 154 #> 123 TCGA-BT-A20W-01 1 254 0 254 0 254 0 254 #> 124 TCGA-BT-A20W-11 1 254 0 254 0 254 0 254 #> 125 TCGA-BT-A20X-01 1 251 1 251 NA NA 1 251 #> 126 TCGA-BT-A2LA-01 0 522 0 522 0 522 0 522 #> 127 TCGA-BT-A2LA-11 0 522 0 522 0 522 0 522 #> 128 TCGA-BT-A2LB-01 1 492 0 492 0 492 0 492 #> 129 TCGA-BT-A2LB-11 1 492 0 492 0 492 0 492 #> 130 TCGA-BT-A2LD-01 1 623 1 623 NA NA 1 555 #> 131 TCGA-BT-A3PH-01 1 142 1 142 NA NA 1 142 #> 132 TCGA-BT-A3PJ-01 0 789 0 789 0 789 0 789 #> 133 TCGA-BT-A3PK-01 1 303 1 303 NA NA 1 303 #> 134 TCGA-BT-A42C-01 0 873 0 873 0 873 0 873 #> 135 TCGA-BT-A42E-01 0 1108 0 1108 0 1108 0 1108 #> 136 TCGA-BT-A42F-01 0 864 0 864 NA NA 0 864 #> 137 TCGA-C4-A0EZ-01 1 273 1 273 NA NA 1 273 #> 138 TCGA-C4-A0F0-01 0 59 0 59 NA NA 0 59 #> 139 TCGA-C4-A0F1-01 0 89 0 89 NA NA 0 89 #> 140 TCGA-C4-A0F6-01 0 700 0 700 NA NA 0 700 #> 141 TCGA-C4-A0F7-01 1 62 1 62 NA NA 1 62 #> 142 TCGA-CF-A1HR-01 0 389 0 389 1 294 1 294 #> 143 TCGA-CF-A1HS-01 0 382 0 382 1 133 1 133 #> 144 TCGA-CF-A27C-01 0 425 0 425 0 425 0 425 #> 145 TCGA-CF-A3MF-01 0 383 0 383 0 383 0 383 #> 146 TCGA-CF-A3MG-01 0 369 0 369 0 369 0 369 #> 147 TCGA-CF-A3MH-01 0 398 0 398 0 398 0 398 #> 148 TCGA-CF-A3MI-01 0 370 0 370 0 370 0 370 #> 149 TCGA-CF-A47S-01 0 333 0 333 0 333 0 333 #> 150 TCGA-CF-A47T-01 1 385 1 385 1 139 1 139 #> 151 TCGA-CF-A47V-01 0 379 0 379 0 379 0 379 #> 152 TCGA-CF-A47W-01 0 368 0 368 0 368 0 368 #> 153 TCGA-CF-A47X-01 0 384 0 384 0 384 0 384 #> 154 TCGA-CF-A47Y-01 0 373 0 373 0 373 0 373 #> 155 TCGA-CF-A5U8-01 0 399 0 399 0 399 0 399 #> 156 TCGA-CF-A5UA-01 0 365 0 365 0 365 0 365 #> 157 TCGA-CF-A7I0-01 0 368 0 368 0 368 0 368 #> 158 TCGA-CF-A8HX-01 0 345 0 345 0 345 0 345 #> 159 TCGA-CF-A8HY-01 0 345 0 345 0 345 0 345 #> 160 TCGA-CF-A9FF-01 0 361 0 361 0 361 0 361 #> 161 TCGA-CF-A9FH-01 0 0 0 0 0 0 0 0 #> 162 TCGA-CF-A9FL-01 1 565 1 565 1 322 1 322 #> 163 TCGA-CF-A9FM-01 0 398 0 398 0 398 0 398 #> 164 TCGA-CU-A0YN-01 1 393 NA 393 NA NA 0 393 #> 165 TCGA-CU-A0YN-11 1 393 NA 393 NA NA 0 393 #> 166 TCGA-CU-A0YO-01 1 149 1 149 NA NA 1 118 #> 167 TCGA-CU-A0YR-01 1 460 1 460 NA NA 1 219 #> 168 TCGA-CU-A0YR-11 1 460 1 460 NA NA 1 219 #> 169 TCGA-CU-A3KJ-01 0 562 0 562 NA NA 1 166 #> 170 TCGA-CU-A3QU-01 0 158 0 158 NA NA 0 158 #> 171 TCGA-CU-A3YL-01 0 906 0 906 1 370 1 370 #> 172 TCGA-CU-A5W6-01 1 56 0 56 0 56 0 56 #> 173 TCGA-CU-A72E-01 1 413 1 413 NA NA 1 256 #> 174 TCGA-DK-A1A3-01 1 665 1 665 NA NA 1 665 #> 175 TCGA-DK-A1A5-01 1 65 0 65 0 65 0 65 #> 176 TCGA-DK-A1A6-01 0 2020 0 2020 NA NA 0 2020 #> 177 TCGA-DK-A1A7-01 0 560 0 560 NA NA 1 112 #> 178 TCGA-DK-A1AA-01 0 578 0 578 0 578 0 578 #> 179 TCGA-DK-A1AB-01 1 508 NA 508 NA NA 1 364 #> 180 TCGA-DK-A1AC-01 0 3981 0 3981 0 3981 0 3981 #> 181 TCGA-DK-A1AD-01 0 3420 0 3420 NA NA 0 3420 #> 182 TCGA-DK-A1AE-01 0 491 0 491 NA NA 1 211 #> 183 TCGA-DK-A1AF-01 0 536 0 536 NA NA 1 283 #> 184 TCGA-DK-A1AG-01 0 475 0 475 0 475 0 475 #> 185 TCGA-DK-A2HX-01 1 1420 0 1420 NA NA 0 1420 #> 186 TCGA-DK-A2I1-01 0 546 0 546 0 546 0 546 #> 187 TCGA-DK-A2I2-01 1 237 1 237 NA NA 1 163 #> 188 TCGA-DK-A2I4-01 0 4343 0 4343 0 4343 0 4343 #> 189 TCGA-DK-A2I6-01 0 2656 0 2656 NA NA 0 2656 #> 190 TCGA-DK-A3IK-01 1 146 0 146 NA NA 0 146 #> 191 TCGA-DK-A3IL-01 1 413 0 413 NA NA 0 413 #> 192 TCGA-DK-A3IM-01 1 248 1 248 1 201 1 201 #> 193 TCGA-DK-A3IN-01 1 250 0 250 0 250 0 250 #> 194 TCGA-DK-A3IQ-01 1 539 1 539 1 250 1 250 #> 195 TCGA-DK-A3IS-01 0 1529 0 1529 0 1529 0 1529 #> 196 TCGA-DK-A3IT-01 0 648 0 648 0 648 0 648 #> 197 TCGA-DK-A3IU-01 1 706 1 706 1 462 1 462 #> 198 TCGA-DK-A3IV-01 1 294 1 294 NA NA 1 212 #> 199 TCGA-DK-A3WW-01 0 633 0 633 0 633 0 633 #> 200 TCGA-DK-A3WX-01 1 321 1 321 NA NA 1 167 #> 201 TCGA-DK-A3WY-01 0 4967 0 4967 0 4967 0 4967 #> 202 TCGA-DK-A3X1-01 0 2009 0 2009 0 2009 0 2009 #> 203 TCGA-DK-A3X2-01 1 547 1 547 NA NA 1 533 #> 204 TCGA-DK-A6AV-01 0 1952 0 1952 0 1952 0 1952 #> 205 TCGA-DK-A6AW-01 0 1621 0 1621 0 1621 0 1621 #> 206 TCGA-DK-A6B0-01 0 2330 0 2330 0 2330 0 2330 #> 207 TCGA-DK-A6B1-01 0 2049 0 2049 0 2049 0 2049 #> 208 TCGA-DK-A6B2-01 0 477 0 477 NA NA 1 268 #> 209 TCGA-DK-A6B5-01 0 1542 0 1542 NA NA 0 1542 #> 210 TCGA-DK-A6B6-01 0 1115 0 1115 0 1115 0 1115 #> 211 TCGA-DK-AA6L-01 1 1163 1 1163 NA NA 1 920 #> 212 TCGA-DK-AA6M-01 0 1582 0 1582 NA NA 0 1582 #> 213 TCGA-DK-AA6P-01 0 457 0 457 NA NA 1 16 #> 214 TCGA-DK-AA6Q-01 1 413 1 413 NA NA 1 285 #> 215 TCGA-DK-AA6R-01 0 5041 0 5041 NA NA 1 4907 #> 216 TCGA-DK-AA6S-01 0 5050 0 5050 1 539 1 539 #> 217 TCGA-DK-AA6T-01 0 572 0 572 0 572 0 572 #> 218 TCGA-DK-AA6U-01 0 578 0 578 0 578 0 578 #> 219 TCGA-DK-AA6W-01 1 415 1 415 NA NA 1 379 #> 220 TCGA-DK-AA6X-01 0 467 0 467 NA NA 0 467 #> 221 TCGA-DK-AA71-01 0 415 0 415 NA NA 0 415 #> 222 TCGA-DK-AA74-01 0 1708 0 1708 0 1708 0 1708 #> 223 TCGA-DK-AA75-01 1 340 1 340 NA NA 1 328 #> 224 TCGA-DK-AA76-01 0 366 0 366 0 366 0 366 #> 225 TCGA-DK-AA77-01 0 618 0 618 NA NA 1 467 #> 226 TCGA-E5-A2PC-01 0 1326 0 1326 NA NA 0 1326 #> 227 TCGA-E5-A4TZ-01 1 467 1 467 NA NA 1 435 #> 228 TCGA-E5-A4U1-01 0 1181 0 1181 1 705 1 705 #> 229 TCGA-E7-A3X6-01 1 904 1 904 1 369 1 369 #> 230 TCGA-E7-A3Y1-01 0 163 0 163 0 163 0 163 #> 231 TCGA-E7-A4IJ-01 1 674 1 674 1 620 1 620 #> 232 TCGA-E7-A4XJ-01 1 68 0 68 0 68 0 68 #> 233 TCGA-E7-A519-01 0 508 0 508 0 508 0 508 #> 234 TCGA-E7-A541-01 1 778 0 778 0 778 0 778 #> 235 TCGA-E7-A5KE-01 0 17 0 17 NA NA 0 17 #> 236 TCGA-E7-A5KF-01 0 20 0 20 NA NA 0 20 #> 237 TCGA-E7-A677-01 0 820 0 820 0 820 0 820 #> 238 TCGA-E7-A678-01 0 798 0 798 0 798 0 798 #> 239 TCGA-E7-A6MD-01 0 129 0 129 NA NA 0 129 #> 240 TCGA-E7-A6ME-01 0 731 0 731 0 731 0 731 #> 241 TCGA-E7-A6MF-01 0 750 0 750 0 750 0 750 #> 242 TCGA-E7-A7DU-01 0 28 0 28 0 28 0 28 #> 243 TCGA-E7-A7DV-01 0 37 0 37 NA NA 0 37 #> 244 TCGA-E7-A7PW-01 0 416 0 416 1 174 1 174 #> 245 TCGA-E7-A7XN-01 0 428 0 428 NA NA 1 190 #> 246 TCGA-E7-A85H-01 0 394 0 394 0 394 0 394 #> 247 TCGA-E7-A8O7-01 0 466 0 466 0 466 0 466 #> 248 TCGA-E7-A8O8-01 0 13 0 13 0 13 0 13 #> 249 TCGA-E7-A97P-01 1 437 0 437 0 437 0 437 #> 250 TCGA-E7-A97Q-01 1 246 1 246 NA NA 1 246 #> 251 TCGA-FD-A3B3-01 1 974 0 974 0 974 0 974 #> 252 TCGA-FD-A3B4-01 1 510 1 510 1 359 1 359 #> 253 TCGA-FD-A3B5-01 1 272 1 272 NA NA 1 272 #> 254 TCGA-FD-A3B6-01 1 1005 0 1005 0 1005 0 1005 #> 255 TCGA-FD-A3B7-01 1 122 1 122 NA NA 1 110 #> 256 TCGA-FD-A3B8-01 0 384 0 384 0 384 0 384 #> 257 TCGA-FD-A3N5-01 1 685 1 685 NA NA 1 346 #> 258 TCGA-FD-A3N6-01 0 851 0 851 0 851 0 851 #> 259 TCGA-FD-A3NA-01 0 1845 0 1845 0 1845 1 1338 #> 260 TCGA-FD-A3SJ-01 1 739 1 739 NA NA 1 281 #> 261 TCGA-FD-A3SL-01 1 712 1 712 NA NA 1 260 #> 262 TCGA-FD-A3SM-01 1 547 1 547 NA NA 1 144 #> 263 TCGA-FD-A3SN-01 0 887 0 887 NA NA 1 110 #> 264 TCGA-FD-A3SO-01 1 168 1 168 NA NA 1 143 #> 265 TCGA-FD-A3SP-01 0 783 0 783 0 783 0 783 #> 266 TCGA-FD-A3SQ-01 1 1423 1 1423 NA NA 1 991 #> 267 TCGA-FD-A3SR-01 1 602 1 602 NA NA 1 372 #> 268 TCGA-FD-A3SS-01 1 391 1 391 NA NA 1 220 #> 269 TCGA-FD-A43N-01 0 699 0 699 NA NA 0 699 #> 270 TCGA-FD-A43P-01 0 832 0 832 0 832 0 832 #> 271 TCGA-FD-A43S-01 0 455 0 455 0 455 0 455 #> 272 TCGA-FD-A43U-01 0 636 0 636 NA NA 1 497 #> 273 TCGA-FD-A43X-01 0 110 0 110 0 110 0 110 #> 274 TCGA-FD-A43Y-01 1 474 0 474 0 474 0 474 #> 275 TCGA-FD-A5BR-01 0 813 0 813 0 813 0 813 #> 276 TCGA-FD-A5BS-01 0 1639 0 1639 0 1639 0 1639 #> 277 TCGA-FD-A5BT-01 1 328 0 328 NA NA 0 328 #> 278 TCGA-FD-A5BU-01 0 588 0 588 0 588 0 588 #> 279 TCGA-FD-A5BV-01 1 163 1 163 NA NA 1 134 #> 280 TCGA-FD-A5BX-01 1 173 1 173 NA NA 1 99 #> 281 TCGA-FD-A5BY-01 0 251 0 251 0 251 0 251 #> 282 TCGA-FD-A5BZ-01 1 835 1 835 NA NA 1 533 #> 283 TCGA-FD-A5C0-01 1 550 1 550 NA NA 1 27 #> 284 TCGA-FD-A5C1-01 0 1792 0 1792 0 1792 0 1792 #> 285 TCGA-FD-A62N-01 0 82 0 82 0 82 0 82 #> 286 TCGA-FD-A62O-01 1 216 0 216 NA NA 0 216 #> 287 TCGA-FD-A62P-01 1 191 1 191 NA NA 1 191 #> 288 TCGA-FD-A62S-01 1 406 1 406 NA NA 1 306 #> 289 TCGA-FD-A6TA-01 0 1912 0 1912 NA NA 0 1912 #> 290 TCGA-FD-A6TB-01 0 572 0 572 0 572 0 572 #> 291 TCGA-FD-A6TC-01 0 187 0 187 0 187 0 187 #> 292 TCGA-FD-A6TD-01 1 386 0 386 0 386 0 386 #> 293 TCGA-FD-A6TE-01 0 376 0 376 NA NA 1 321 #> 294 TCGA-FD-A6TF-01 1 69 0 69 NA NA 0 69 #> 295 TCGA-FD-A6TG-01 1 93 0 93 NA NA 0 93 #> 296 TCGA-FD-A6TH-01 1 131 1 131 NA NA 1 126 #> 297 TCGA-FD-A6TI-01 1 294 0 294 NA NA 0 294 #> 298 TCGA-FD-A6TK-01 0 330 0 330 0 330 0 330 #> 299 TCGA-FJ-A3Z7-01 0 945 0 945 NA NA 0 945 #> 300 TCGA-FJ-A3Z9-01 1 385 0 385 0 385 0 385 #> 301 TCGA-FJ-A3ZE-01 1 324 1 324 NA NA 1 152 #> 302 TCGA-FJ-A3ZF-01 0 524 0 524 0 524 0 524 #> 303 TCGA-FJ-A871-01 1 272 1 272 NA NA 1 106 #> 304 TCGA-FT-A3EE-01 1 99 0 99 NA NA 0 99 #> 305 TCGA-FT-A61P-01 0 337 0 337 NA NA 0 337 #> 306 TCGA-G2-A2EC-01 1 696 1 696 NA NA 1 679 #> 307 TCGA-G2-A2EF-01 0 1884 0 1884 NA NA 0 1884 #> 308 TCGA-G2-A2EJ-01 0 1460 0 1460 1 910 1 910 #> 309 TCGA-G2-A2EK-01 0 485 0 485 NA NA 1 485 #> 310 TCGA-G2-A2EL-01 1 819 1 819 NA NA 1 105 #> 311 TCGA-G2-A2EO-01 1 1804 0 1804 0 1804 0 1804 #> 312 TCGA-G2-A2ES-01 1 1004 1 1004 NA NA 1 897 #> 313 TCGA-G2-A3IB-01 1 220 1 220 NA NA 1 220 #> 314 TCGA-G2-A3IE-01 1 612 1 612 NA NA 1 612 #> 315 TCGA-G2-A3VY-01 0 536 0 536 NA NA 0 536 #> 316 TCGA-G2-AA3B-01 0 2008 0 2008 0 2008 0 2008 #> 317 TCGA-G2-AA3C-01 1 211 1 211 NA NA 1 211 #> 318 TCGA-G2-AA3D-01 0 2139 0 2139 NA NA 0 2139 #> 319 TCGA-G2-AA3F-01 0 893 0 893 NA NA 0 893 #> 320 TCGA-GC-A3BM-01 1 651 1 651 NA NA 1 651 #> 321 TCGA-GC-A3BM-11 1 651 1 651 NA NA 1 651 #> 322 TCGA-GC-A3I6-01 1 630 1 630 NA NA 1 546 #> 323 TCGA-GC-A3OO-01 0 481 0 481 0 481 0 481 #> 324 TCGA-GC-A3RB-01 0 582 0 582 0 582 0 582 #> 325 TCGA-GC-A3RC-01 0 484 0 484 0 484 0 484 #> 326 TCGA-GC-A3RD-01 0 428 0 428 0 428 0 428 #> 327 TCGA-GC-A3WC-01 0 540 0 540 0 540 0 540 #> 328 TCGA-GC-A3WC-11 0 540 0 540 0 540 0 540 #> 329 TCGA-GC-A3YS-01 0 758 0 758 NA NA 0 758 #> 330 TCGA-GC-A4ZW-01 0 15 0 15 NA NA 0 15 #> 331 TCGA-GC-A6I1-01 1 272 0 272 0 272 0 272 #> 332 TCGA-GC-A6I3-01 0 423 0 423 NA NA 0 423 #> 333 TCGA-GC-A6I3-11 0 423 0 423 NA NA 0 423 #> 334 TCGA-GD-A2C5-01 0 812 0 812 NA NA 1 214 #> 335 TCGA-GD-A2C5-11 0 812 0 812 NA NA 1 214 #> 336 TCGA-GD-A3OP-01 0 64 0 64 NA NA 0 64 #> 337 TCGA-GD-A3OP-11 0 64 0 64 NA NA 0 64 #> 338 TCGA-GD-A3OQ-01 0 95 0 95 NA NA 0 95 #> 339 TCGA-GD-A3OQ-11 0 95 0 95 NA NA 0 95 #> 340 TCGA-GD-A3OS-01 0 638 0 638 NA NA 1 223 #> 341 TCGA-GD-A6C6-01 0 67 0 67 0 67 0 67 #> 342 TCGA-GD-A76B-01 0 224 0 224 0 224 0 224 #> 343 TCGA-GU-A42P-01 1 332 0 332 NA NA 0 332 #> 344 TCGA-GU-A42Q-01 1 344 0 344 0 344 0 344 #> 345 TCGA-GU-A42R-01 1 577 1 577 NA NA 1 91 #> 346 TCGA-GU-A762-01 1 232 1 232 NA NA 1 232 #> 347 TCGA-GU-A763-01 0 997 0 997 NA NA 1 303 #> 348 TCGA-GU-A764-01 0 610 0 610 0 610 0 610 #> 349 TCGA-GU-A766-01 0 480 0 480 NA NA 0 480 #> 350 TCGA-GU-A767-01 1 144 1 144 NA NA 1 144 #> 351 TCGA-GU-AATO-01 1 324 1 324 NA NA 1 324 #> 352 TCGA-GU-AATP-01 0 1003 0 1003 NA NA 1 596 #> 353 TCGA-GU-AATQ-01 1 213 1 213 NA NA 1 213 #> 354 TCGA-GV-A3JV-01 1 434 1 434 NA NA 1 134 #> 355 TCGA-GV-A3JW-01 0 649 0 649 NA NA 1 271 #> 356 TCGA-GV-A3JX-01 0 581 0 581 0 581 0 581 #> 357 TCGA-GV-A3JZ-01 0 603 0 603 NA NA 0 603 #> 358 TCGA-GV-A3QF-01 1 617 0 617 NA NA 0 617 #> 359 TCGA-GV-A3QG-01 1 NA 1 NA NA NA 1 84 #> 360 TCGA-GV-A3QH-01 1 258 0 258 NA NA 1 125 #> 361 TCGA-GV-A3QI-01 0 1110 0 1110 1 768 1 768 #> 362 TCGA-GV-A3QK-01 0 832 0 832 NA NA 0 832 #> 363 TCGA-GV-A40E-01 1 261 1 261 NA NA 1 219 #> 364 TCGA-GV-A40G-01 0 580 0 580 0 580 0 580 #> 365 TCGA-GV-A6ZA-01 0 691 0 691 0 691 0 691 #> 366 TCGA-H4-A2HO-01 0 46 0 46 0 46 0 46 #> 367 TCGA-H4-A2HQ-01 0 590 0 590 NA NA 1 318 #> 368 TCGA-HQ-A2OE-01 0 1174 0 1174 NA NA 0 1174 #> 369 TCGA-HQ-A2OF-01 0 1947 0 1947 1 907 1 907 #> 370 TCGA-HQ-A5ND-01 1 274 1 274 NA NA 1 84 #> 371 TCGA-HQ-A5NE-01 1 370 1 370 1 211 1 211 #> 372 TCGA-K4-A3WS-01 0 761 0 761 0 761 0 761 #> 373 TCGA-K4-A3WU-01 0 105 0 105 NA NA 0 105 #> 374 TCGA-K4-A3WV-01 0 646 0 646 NA NA 0 646 #> 375 TCGA-K4-A3WV-11 0 646 0 646 NA NA 0 646 #> 376 TCGA-K4-A4AB-01 0 84 0 84 NA NA 0 84 #> 377 TCGA-K4-A4AC-01 1 278 1 278 NA NA 1 170 #> 378 TCGA-K4-A54R-01 0 842 0 842 0 842 0 842 #> 379 TCGA-K4-A54R-11 0 842 0 842 0 842 0 842 #> 380 TCGA-K4-A5RH-01 0 276 0 276 NA NA 1 196 #> 381 TCGA-K4-A5RI-01 1 356 1 356 NA NA 1 236 #> 382 TCGA-K4-A5RI-11 1 356 1 356 NA NA 1 236 #> 383 TCGA-K4-A5RJ-01 0 539 0 539 0 539 0 539 #> 384 TCGA-K4-A6FZ-01 0 55 0 55 0 55 0 55 #> 385 TCGA-K4-A6MB-01 0 469 0 469 NA NA 0 469 #> 386 TCGA-K4-A83P-01 0 495 0 495 NA NA 1 70 #> 387 TCGA-K4-AAQO-01 0 359 0 359 NA NA 0 359 #> 388 TCGA-KQ-A41N-01 0 1604 0 1604 0 1604 0 1604 #> 389 TCGA-KQ-A41O-01 0 1538 0 1538 NA NA 0 1538 #> 390 TCGA-KQ-A41P-01 0 1094 0 1094 NA NA 1 178 #> 391 TCGA-KQ-A41Q-01 0 1429 0 1429 NA NA 1 1314 #> 392 TCGA-KQ-A41R-01 0 1350 0 1350 0 1350 0 1350 #> 393 TCGA-KQ-A41S-01 0 35 0 35 0 35 0 35 #> 394 TCGA-LC-A66R-01 0 466 0 466 NA NA 0 466 #> 395 TCGA-LT-A5Z6-01 0 474 0 474 0 474 0 474 #> 396 TCGA-LT-A8JT-01 0 641 0 641 0 641 0 641 #> 397 TCGA-MV-A51V-01 0 410 0 410 0 410 0 410 #> 398 TCGA-PQ-A6FI-01 0 372 0 372 0 372 0 372 #> 399 TCGA-PQ-A6FN-01 0 507 0 507 NA NA 0 507 #> 400 TCGA-R3-A69X-01 0 433 0 433 0 433 0 433 #> 401 TCGA-S5-A6DX-01 1 56 1 56 NA NA 1 56 #> 402 TCGA-S5-AA26-01 0 503 0 503 0 503 0 503 #> 403 TCGA-SY-A9G0-01 1 1008 0 1008 NA NA 0 1008 #> 404 TCGA-SY-A9G5-01 0 1186 0 1186 0 1186 0 1186 #> 405 TCGA-UY-A78K-01 1 536 NA 536 NA NA 0 536 #> 406 TCGA-UY-A78L-01 0 1127 0 1127 NA NA 1 355 #> 407 TCGA-UY-A78M-01 1 690 1 690 NA NA 1 690 #> 408 TCGA-UY-A78N-01 1 2641 1 2641 NA NA 1 2472 #> 409 TCGA-UY-A78O-01 0 2312 0 2312 0 2312 0 2312 #> 410 TCGA-UY-A78P-01 0 2380 0 2380 0 2380 0 2380 #> 411 TCGA-UY-A8OB-01 0 2109 0 2109 NA NA 0 2109 #> 412 TCGA-UY-A8OC-01 1 92 1 92 NA NA 1 32 #> 413 TCGA-UY-A8OD-01 0 3432 0 3432 0 3432 0 3432 #> 414 TCGA-UY-A9PA-01 0 1072 0 1072 0 1072 0 1072 #> 415 TCGA-UY-A9PB-01 0 899 0 899 0 899 0 899 #> 416 TCGA-UY-A9PD-01 0 542 0 542 0 542 0 542 #> 417 TCGA-UY-A9PE-01 0 189 0 189 NA NA 1 473 #> 418 TCGA-UY-A9PF-01 0 117 0 117 NA NA 0 117 #> 419 TCGA-UY-A9PH-01 0 1561 0 1561 0 1561 0 1561 #> 420 TCGA-XF-A8HB-01 0 1370 0 1370 0 1370 0 1370 #> 421 TCGA-XF-A8HC-01 1 200 NA 200 NA NA 0 200 #> 422 TCGA-XF-A8HD-01 0 2964 0 2964 0 2964 0 2964 #> 423 TCGA-XF-A8HE-01 0 3817 0 3817 0 3817 0 3817 #> 424 TCGA-XF-A8HF-01 1 2954 0 2954 0 2954 0 2954 #> 425 TCGA-XF-A8HG-01 1 467 1 467 1 398 1 398 #> 426 TCGA-XF-A8HH-01 1 57 1 57 NA NA 1 57 #> 427 TCGA-XF-A8HI-01 1 544 1 544 NA NA 1 468 #> 428 TCGA-XF-A9SH-01 1 1971 1 1971 NA NA 1 547 #> 429 TCGA-XF-A9SI-01 0 2423 0 2423 0 2423 0 2423 #> 430 TCGA-XF-A9SJ-01 1 98 1 98 NA NA 1 98 #> 431 TCGA-XF-A9SK-01 1 486 1 486 NA NA 1 382 #> 432 TCGA-XF-A9SL-01 1 2020 0 2020 NA NA 0 2020 #> 433 TCGA-XF-A9SM-01 0 1048 0 1048 0 1048 0 1048 #> 434 TCGA-XF-A9SP-01 1 454 1 454 NA NA 1 310 #> 435 TCGA-XF-A9ST-01 1 128 NA 128 NA NA 0 128 #> 436 TCGA-XF-A9SU-01 1 182 1 182 NA NA 1 103 #> 437 TCGA-XF-A9SV-01 1 388 1 388 NA NA 1 237 #> 438 TCGA-XF-A9SW-01 1 362 1 362 NA NA 1 362 #> 439 TCGA-XF-A9SX-01 1 719 1 719 NA NA 1 475 #> 440 TCGA-XF-A9SY-01 0 640 0 640 NA NA 1 168 #> 441 TCGA-XF-A9SZ-01 1 859 1 859 NA NA 1 854 #> 442 TCGA-XF-A9T0-01 0 799 0 799 0 799 0 799 #> 443 TCGA-XF-A9T2-01 1 575 NA 575 NA NA 0 575 #> 444 TCGA-XF-A9T3-01 0 68 0 68 NA NA 0 68 #> 445 TCGA-XF-A9T4-01 1 495 1 495 NA NA 1 182 #> 446 TCGA-XF-A9T5-01 0 2027 0 2027 NA NA 1 664 #> 447 TCGA-XF-A9T6-01 0 64 0 64 NA NA 0 64 #> 448 TCGA-XF-A9T8-01 1 418 NA 418 NA NA 0 418 #> 449 TCGA-XF-AAME-01 1 2828 1 2828 NA NA 1 1651 #> 450 TCGA-XF-AAMG-01 0 3364 0 3364 0 3364 0 3364 #> 451 TCGA-XF-AAMH-01 1 344 1 344 NA NA 1 313 #> 452 TCGA-XF-AAMJ-01 1 1670 0 1670 0 1670 0 1670 #> 453 TCGA-XF-AAML-01 1 232 0 232 0 232 0 232 #> 454 TCGA-XF-AAMQ-01 0 2177 0 2177 0 2177 0 2177 #> 455 TCGA-XF-AAMR-01 0 2790 0 2790 0 2790 0 2790 #> 456 TCGA-XF-AAMT-01 1 90 1 90 NA NA 1 90 #> 457 TCGA-XF-AAMW-01 1 253 1 253 NA NA 1 253 #> 458 TCGA-XF-AAMX-01 1 206 0 206 0 206 0 206 #> 459 TCGA-XF-AAMY-01 0 3011 0 3011 1 637 1 637 #> 460 TCGA-XF-AAMZ-01 1 1348 1 1348 NA NA 1 1344 #> 461 TCGA-XF-AAN0-01 1 1718 1 1718 NA NA 1 603 #> 462 TCGA-XF-AAN1-01 1 941 1 941 NA NA 1 650 #> 463 TCGA-XF-AAN2-01 1 1869 0 1869 0 1869 0 1869 #> 464 TCGA-XF-AAN3-01 0 2625 0 2625 NA NA 0 2625 #> 465 TCGA-XF-AAN4-01 1 823 0 823 0 823 0 823 #> 466 TCGA-XF-AAN5-01 0 2293 0 2293 0 2293 0 2293 #> 467 TCGA-XF-AAN7-01 1 565 1 565 NA NA 1 321 #> 468 TCGA-XF-AAN8-01 1 118 NA 118 NA NA 0 118 #> 469 TCGA-YC-A89H-01 0 573 0 573 0 573 0 573 #> 470 TCGA-YC-A8S6-01 0 293 0 293 0 293 0 293 #> 471 TCGA-YC-A9TC-01 1 20 1 20 NA NA 1 20 #> 472 TCGA-YF-AA3L-01 0 364 0 364 0 364 0 364 #> 473 TCGA-YF-AA3M-01 0 415 0 415 1 381 1 381 #> 474 TCGA-ZF-A9R0-01 1 680 1 680 NA NA 1 559 #> 475 TCGA-ZF-A9R1-01 0 773 0 773 NA NA 1 758 #> 476 TCGA-ZF-A9R2-01 0 642 0 642 0 642 0 642 #> 477 TCGA-ZF-A9R3-01 1 949 1 949 1 917 1 917 #> 478 TCGA-ZF-A9R4-01 0 921 0 921 0 921 0 921 #> 479 TCGA-ZF-A9R5-01 0 1090 0 1090 0 1090 0 1090 #> 480 TCGA-ZF-A9R7-01 0 665 0 665 0 665 0 665 #> 481 TCGA-ZF-A9R9-01 1 864 1 864 NA NA 1 629 #> 482 TCGA-ZF-A9RC-01 0 2868 0 2868 0 2868 0 2868 #> 483 TCGA-ZF-A9RE-01 1 106 1 106 NA NA 1 106 #> 484 TCGA-ZF-A9RF-01 0 1949 0 1949 1 1565 1 1565 #> 485 TCGA-ZF-A9RL-01 0 2703 0 2703 1 1064 1 1064 #> 486 TCGA-ZF-A9RM-01 0 1455 0 1455 0 1455 0 1455 #> 487 TCGA-ZF-A9RN-01 1 615 1 615 NA NA 1 516 #> 488 TCGA-ZF-AA4N-01 1 88 1 88 NA NA 1 88 #> 489 TCGA-ZF-AA4R-01 1 1036 1 1036 NA NA 1 750 #> 490 TCGA-ZF-AA4T-01 1 599 1 599 NA NA 1 511 #> 491 TCGA-ZF-AA4U-01 1 262 1 262 NA NA 1 199 #> 492 TCGA-ZF-AA4V-01 0 1806 0 1806 0 1806 0 1806 #> 493 TCGA-ZF-AA4W-01 0 1830 0 1830 1 1679 1 1679 #> 494 TCGA-ZF-AA4X-01 0 2044 0 2044 1 1665 1 1665 #> 495 TCGA-ZF-AA51-01 0 1714 0 1714 0 1714 0 1714 #> 496 TCGA-ZF-AA52-01 1 1077 NA 1077 NA NA 0 1077 #> 497 TCGA-ZF-AA53-01 0 1761 0 1761 0 1761 0 1761 #> 498 TCGA-ZF-AA54-01 1 590 NA 590 NA NA 0 590 #> 499 TCGA-ZF-AA56-01 1 259 1 259 NA NA 1 248 #> 500 TCGA-ZF-AA58-01 0 1649 0 1649 NA NA 0 1649 #> 501 TCGA-ZF-AA5H-01 0 897 0 897 NA NA 1 177 #> 502 TCGA-ZF-AA5N-01 1 168 1 168 NA NA 1 168 #> 503 TCGA-ZF-AA5P-01 0 372 0 372 NA NA 0 372 #> 504 TCGA-3C-AAAU-01 0 4047 0 4047 1 1808 1 1808 #> 505 TCGA-3C-AALI-01 0 4005 0 4005 0 4005 0 4005 #> 506 TCGA-3C-AALJ-01 0 1474 0 1474 0 1474 0 1474 #> 507 TCGA-3C-AALK-01 0 1448 0 1448 NA NA 0 1448 #> 508 TCGA-4H-AAAK-01 0 348 0 348 0 348 0 348 #> 509 TCGA-5L-AAT0-01 0 1477 0 1477 NA NA 0 1477 #> 510 TCGA-5L-AAT1-01 0 1471 0 1471 NA NA 0 1471 #> 511 TCGA-5T-A9QA-01 0 303 0 303 NA NA 0 303 #> 512 TCGA-A1-A0SB-01 0 259 0 259 0 259 0 259 #> 513 TCGA-A1-A0SD-01 0 437 0 437 0 437 0 437 #> 514 TCGA-A1-A0SE-01 0 1321 0 1321 0 1321 0 1321 #> 515 TCGA-A1-A0SF-01 0 1463 0 1463 0 1463 0 1463 #> 516 TCGA-A1-A0SG-01 0 434 0 434 0 434 0 434 #> 517 TCGA-A1-A0SH-01 0 1437 0 1437 0 1437 0 1437 #> 518 TCGA-A1-A0SI-01 0 635 0 635 0 635 0 635 #> 519 TCGA-A1-A0SJ-01 0 416 0 416 0 416 0 416 #> 520 TCGA-A1-A0SK-01 1 967 1 967 NA NA 1 967 #> 521 TCGA-A1-A0SM-01 0 242 0 242 0 242 0 242 #> 522 TCGA-A1-A0SN-01 0 1196 0 1196 0 1196 0 1196 #> 523 TCGA-A1-A0SO-01 0 852 0 852 0 852 0 852 #> 524 TCGA-A1-A0SP-01 0 584 0 584 0 584 0 584 #> 525 TCGA-A1-A0SQ-01 0 554 0 554 0 554 0 554 #> 526 TCGA-A2-A04N-01 0 4354 0 4354 0 4354 0 4354 #> 527 TCGA-A2-A04P-01 1 548 1 548 NA NA 1 102 #> 528 TCGA-A2-A04Q-01 0 2385 0 2385 0 2385 0 2385 #> 529 TCGA-A2-A04R-01 0 3709 0 3709 0 3709 0 3709 #> 530 TCGA-A2-A04T-01 0 2246 0 2246 0 2246 0 2246 #> 531 TCGA-A2-A04U-01 0 2654 0 2654 0 2654 0 2654 #> 532 TCGA-A2-A04V-01 1 1920 1 1920 1 1470 1 1470 #> 533 TCGA-A2-A04W-01 0 3102 0 3102 0 3102 0 3102 #> 534 TCGA-A2-A04X-01 0 1686 0 1686 0 1686 0 1686 #> 535 TCGA-A2-A04Y-01 0 1099 0 1099 0 1099 0 1099 #> 536 TCGA-A2-A0CK-01 0 4159 0 4159 1 1364 1 1364 #> 537 TCGA-A2-A0CL-01 0 3015 0 3015 NA NA 0 3015 #> 538 TCGA-A2-A0CM-01 1 754 1 754 1 382 1 382 #> 539 TCGA-A2-A0CO-01 1 3492 0 3492 NA NA 0 3492 #> 540 TCGA-A2-A0CP-01 0 2813 0 2813 0 2813 0 2813 #> 541 TCGA-A2-A0CQ-01 0 2695 0 2695 0 2695 0 2695 #> 542 TCGA-A2-A0CR-01 0 3283 0 3283 NA NA 0 3283 #> 543 TCGA-A2-A0CS-01 1 2348 0 2348 NA NA 0 2348 #> 544 TCGA-A2-A0CT-01 0 2289 0 2289 0 2289 0 2289 #> 545 TCGA-A2-A0CU-01 1 158 0 158 NA NA 0 158 #> 546 TCGA-A2-A0CV-01 0 3011 0 3011 0 3011 0 3011 #> 547 TCGA-A2-A0CW-01 0 3283 0 3283 0 3283 0 3283 #> 548 TCGA-A2-A0CX-01 0 1728 0 1728 0 1728 0 1728 #> 549 TCGA-A2-A0CY-01 0 1673 0 1673 0 1673 0 1673 #> 550 TCGA-A2-A0CZ-01 0 1616 0 1616 NA NA 0 1616 #> 551 TCGA-A2-A0D0-01 0 2048 0 2048 0 2048 0 2048 #> 552 TCGA-A2-A0D1-01 0 1051 0 1051 0 1051 0 1051 #> 553 TCGA-A2-A0D2-01 0 1027 0 1027 0 1027 0 1027 #> 554 TCGA-A2-A0D3-01 0 1873 0 1873 0 1873 0 1873 #> 555 TCGA-A2-A0D4-01 0 767 0 767 0 767 0 767 #> 556 TCGA-A2-A0EM-01 0 3094 0 3094 0 3094 0 3094 #> 557 TCGA-A2-A0EN-01 0 4088 0 4088 0 4088 0 4088 #> 558 TCGA-A2-A0EO-01 0 2442 0 2442 NA NA 0 2442 #> 559 TCGA-A2-A0EP-01 0 3603 0 3603 0 3603 0 3603 #> 560 TCGA-A2-A0EQ-01 0 2426 0 2426 0 2426 0 2426 #> 561 TCGA-A2-A0ER-01 0 2263 0 2263 0 2263 0 2263 #> 562 TCGA-A2-A0ES-01 0 2190 0 2190 0 2190 0 2190 #> 563 TCGA-A2-A0ET-01 0 1066 0 1066 0 1066 0 1066 #> 564 TCGA-A2-A0EU-01 0 1043 0 1043 0 1043 0 1043 #> 565 TCGA-A2-A0EV-01 0 968 0 968 0 968 0 968 #> 566 TCGA-A2-A0EW-01 1 1884 1 1884 NA NA 1 1353 #> 567 TCGA-A2-A0EX-01 0 752 0 752 0 752 0 752 #> 568 TCGA-A2-A0EY-01 0 1925 0 1925 0 1925 0 1925 #> 569 TCGA-A2-A0ST-01 0 3017 0 3017 0 3017 0 3017 #> 570 TCGA-A2-A0SU-01 0 1662 0 1662 0 1662 0 1662 #> 571 TCGA-A2-A0SV-01 1 825 1 825 NA NA 1 825 #> 572 TCGA-A2-A0SW-01 1 1365 1 1365 NA NA 1 653 #> 573 TCGA-A2-A0SX-01 0 1534 0 1534 1 1239 1 1239 #> 574 TCGA-A2-A0SY-01 0 1347 0 1347 0 1347 0 1347 #> 575 TCGA-A2-A0T0-01 0 533 0 533 0 533 0 533 #> 576 TCGA-A2-A0T1-01 0 521 0 521 0 521 0 521 #> 577 TCGA-A2-A0T2-01 1 255 1 255 NA NA 1 255 #> 578 TCGA-A2-A0T3-01 0 1516 0 1516 0 1516 0 1516 #> 579 TCGA-A2-A0T4-01 0 624 0 624 0 624 0 624 #> 580 TCGA-A2-A0T5-01 0 531 0 531 0 531 0 531 #> 581 TCGA-A2-A0T6-01 0 575 0 575 0 575 0 575 #> 582 TCGA-A2-A0T7-01 0 631 0 631 0 631 0 631 #> 583 TCGA-A2-A0YC-01 0 990 0 990 NA NA 1 756 #> 584 TCGA-A2-A0YD-01 0 769 0 769 0 769 0 769 #> 585 TCGA-A2-A0YE-01 0 554 0 554 0 554 0 554 #> 586 TCGA-A2-A0YF-01 0 1535 0 1535 0 1535 0 1535 #> 587 TCGA-A2-A0YG-01 0 666 0 666 0 666 0 666 #> 588 TCGA-A2-A0YH-01 0 659 0 659 0 659 0 659 #> 589 TCGA-A2-A0YI-01 0 1505 0 1505 0 1505 0 1505 #> 590 TCGA-A2-A0YJ-01 0 566 0 566 1 559 1 559 #> 591 TCGA-A2-A0YK-01 0 588 0 588 NA NA 0 588 #> 592 TCGA-A2-A0YL-01 0 1474 0 1474 0 1474 0 1474 #> 593 TCGA-A2-A0YM-01 0 965 0 965 0 965 0 965 #> 594 TCGA-A2-A0YT-01 1 723 0 723 0 723 0 723 #> 595 TCGA-A2-A1FV-01 0 714 0 714 0 714 0 714 #> 596 TCGA-A2-A1FW-01 0 528 0 528 0 528 0 528 #> 597 TCGA-A2-A1FX-01 0 1847 0 1847 0 1847 0 1847 #> 598 TCGA-A2-A1FZ-01 0 683 0 683 0 683 0 683 #> 599 TCGA-A2-A1G0-01 0 616 0 616 0 616 0 616 #> 600 TCGA-A2-A1G1-01 0 584 0 584 0 584 0 584 #> 601 TCGA-A2-A1G4-01 0 595 0 595 0 595 0 595 #> 602 TCGA-A2-A1G6-01 0 501 0 501 0 501 0 501 #> 603 TCGA-A2-A259-01 0 1596 0 1596 NA NA 0 1596 #> 604 TCGA-A2-A25A-01 0 3276 0 3276 0 3276 0 3276 #> 605 TCGA-A2-A25B-01 0 1291 0 1291 NA NA 1 1290 #> 606 TCGA-A2-A25C-01 0 523 0 523 0 523 0 523 #> 607 TCGA-A2-A25D-01 0 552 0 552 NA NA 0 552 #> 608 TCGA-A2-A25E-01 0 3204 0 3204 1 2989 1 2989 #> 609 TCGA-A2-A25F-01 0 322 0 322 0 322 0 322 #> 610 TCGA-A2-A3KC-01 0 1102 0 1102 0 1102 0 1102 #> 611 TCGA-A2-A3KD-01 0 1206 0 1206 NA NA 0 1206 #> 612 TCGA-A2-A3XS-01 1 1032 1 1032 1 682 1 682 #> 613 TCGA-A2-A3XT-01 0 2770 0 2770 0 2770 0 2770 #> 614 TCGA-A2-A3XU-01 1 912 1 912 1 574 1 574 #> 615 TCGA-A2-A3XV-01 0 996 0 996 0 996 0 996 #> 616 TCGA-A2-A3XW-01 0 1712 0 1712 0 1712 0 1712 #> 617 TCGA-A2-A3XX-01 1 1439 0 1439 0 1439 0 1439 #> 618 TCGA-A2-A3XY-01 1 1093 1 1093 1 802 1 802 #> 619 TCGA-A2-A3XZ-01 0 1532 0 1532 0 1532 0 1532 #> 620 TCGA-A2-A3Y0-01 0 1546 0 1546 NA NA 0 1546 #> 621 TCGA-A2-A4RW-01 0 222 0 222 0 222 0 222 #> 622 TCGA-A2-A4RX-01 0 742 0 742 0 742 0 742 #> 623 TCGA-A2-A4RY-01 0 648 0 648 0 648 0 648 #> 624 TCGA-A2-A4S0-01 0 706 0 706 0 706 0 706 #> 625 TCGA-A2-A4S1-01 0 820 0 820 0 820 0 820 #> 626 TCGA-A2-A4S2-01 0 643 0 643 0 643 0 643 #> 627 TCGA-A2-A4S3-01 0 666 0 666 0 666 0 666 #> 628 TCGA-A7-A0CD-01 0 1165 0 1165 0 1165 0 1165 #> 629 TCGA-A7-A0CE-01 0 1074 0 1074 0 1074 0 1074 #> 630 TCGA-A7-A0CE-11 0 1074 0 1074 0 1074 0 1074 #> 631 TCGA-A7-A0CG-01 0 1043 0 1043 NA NA 0 1043 #> 632 TCGA-A7-A0CH-01 0 1079 0 1079 0 1079 0 1079 #> 633 TCGA-A7-A0CH-11 0 1079 0 1079 0 1079 0 1079 #> 634 TCGA-A7-A0CJ-01 0 931 0 931 NA NA 0 931 #> 635 TCGA-A7-A0D9-01 0 1139 0 1139 0 1139 0 1139 #> 636 TCGA-A7-A0D9-11 0 1139 0 1139 0 1139 0 1139 #> 637 TCGA-A7-A0DA-01 0 1085 0 1085 0 1085 0 1085 #> 638 TCGA-A7-A0DB-11 0 1007 0 1007 NA NA 0 1007 #> 639 TCGA-A7-A0DB-01 0 1007 0 1007 NA NA 0 1007 #> 640 TCGA-A7-A0DC-01 0 906 0 906 0 906 0 906 #> 641 TCGA-A7-A0DC-11 0 906 0 906 0 906 0 906 #> 642 TCGA-A7-A13D-01 0 965 0 965 0 965 0 965 #> 643 TCGA-A7-A13E-11 1 614 1 614 1 556 1 556 #> 644 TCGA-A7-A13E-01 1 614 1 614 1 556 1 556 #> 645 TCGA-A7-A13F-01 0 765 0 765 0 765 0 765 #> 646 TCGA-A7-A13F-11 0 765 0 765 0 765 0 765 #> 647 TCGA-A7-A13G-01 0 718 0 718 0 718 1 586 #> 648 TCGA-A7-A13G-11 0 718 0 718 0 718 1 586 #> 649 TCGA-A7-A13H-01 0 899 0 899 0 899 1 795 #> 650 TCGA-A7-A26E-01 0 954 0 954 0 954 0 954 #> 651 TCGA-A7-A26F-01 0 738 0 738 0 738 0 738 #> 652 TCGA-A7-A26G-01 0 722 0 722 0 722 0 722 #> 653 TCGA-A7-A26H-01 0 724 0 724 1 291 1 291 #> 654 TCGA-A7-A26I-01 0 661 0 661 0 661 0 661 #> 655 TCGA-A7-A26J-01 0 627 0 627 0 627 0 627 #> 656 TCGA-A7-A2KD-01 0 679 0 679 0 679 0 679 #> 657 TCGA-A7-A3IY-01 0 345 0 345 0 345 0 345 #> 658 TCGA-A7-A3IZ-01 0 322 0 322 0 322 0 322 #> 659 TCGA-A7-A3J0-01 0 313 0 313 0 313 0 313 #> 660 TCGA-A7-A3J1-01 0 343 0 343 0 343 0 343 #> 661 TCGA-A7-A3RF-01 0 408 0 408 1 174 1 174 #> 662 TCGA-A7-A425-01 0 447 0 447 1 419 1 419 #> 663 TCGA-A7-A426-01 0 364 0 364 0 364 0 364 #> 664 TCGA-A7-A4SA-01 0 454 0 454 0 454 0 454 #> 665 TCGA-A7-A4SB-01 0 418 0 418 0 418 0 418 #> 666 TCGA-A7-A4SC-01 0 446 0 446 0 446 0 446 #> 667 TCGA-A7-A4SD-01 0 441 0 441 0 441 0 441 #> 668 TCGA-A7-A4SE-01 0 644 0 644 0 644 0 644 #> 669 TCGA-A7-A4SF-01 0 545 0 545 NA NA 0 545 #> 670 TCGA-A7-A56D-01 0 448 0 448 0 448 0 448 #> 671 TCGA-A7-A5ZV-01 0 368 0 368 0 368 0 368 #> 672 TCGA-A7-A5ZW-01 0 326 0 326 0 326 0 326 #> 673 TCGA-A7-A5ZX-01 0 336 0 336 NA NA 0 336 #> 674 TCGA-A7-A6VV-01 0 313 0 313 0 313 0 313 #> 675 TCGA-A7-A6VW-01 0 285 0 285 NA NA 0 285 #> 676 TCGA-A7-A6VX-01 0 317 0 317 0 317 0 317 #> 677 TCGA-A7-A6VY-01 0 266 0 266 0 266 0 266 #> 678 TCGA-A8-A06N-01 0 0 0 0 0 0 0 0 #> 679 TCGA-A8-A06O-01 0 396 0 396 0 396 0 396 #> 680 TCGA-A8-A06P-01 0 396 0 396 0 396 0 396 #> 681 TCGA-A8-A06Q-01 0 31 0 31 0 31 0 31 #> 682 TCGA-A8-A06R-01 0 547 0 547 0 547 0 547 #> 683 TCGA-A8-A06T-01 0 1614 0 1614 0 1614 0 1614 #> 684 TCGA-A8-A06U-01 1 883 0 883 0 883 0 883 #> 685 TCGA-A8-A06X-01 1 943 0 943 0 943 0 943 #> 686 TCGA-A8-A06Y-01 0 791 0 791 1 791 1 791 #> 687 TCGA-A8-A06Z-01 0 31 0 31 NA NA 0 31 #> 688 TCGA-A8-A075-01 0 518 0 518 0 518 0 518 #> 689 TCGA-A8-A076-01 0 1642 0 1642 0 1642 0 1642 #> 690 TCGA-A8-A079-01 0 274 0 274 0 274 0 274 #> 691 TCGA-A8-A07B-01 0 1308 0 1308 0 1308 0 1308 #> 692 TCGA-A8-A07C-01 0 1034 0 1034 0 1034 0 1034 #> 693 TCGA-A8-A07E-01 0 608 0 608 0 608 0 608 #> 694 TCGA-A8-A07F-01 0 577 0 577 0 577 0 577 #> 695 TCGA-A8-A07G-01 0 577 0 577 0 577 0 577 #> 696 TCGA-A8-A07I-01 0 426 0 426 0 426 0 426 #> 697 TCGA-A8-A07J-01 0 365 0 365 0 365 0 365 #> 698 TCGA-A8-A07L-01 0 975 0 975 0 975 0 975 #> 699 TCGA-A8-A07O-01 0 304 0 304 0 304 0 304 #> 700 TCGA-A8-A07P-01 0 334 0 334 0 334 0 334 #> 701 TCGA-A8-A07R-01 0 273 0 273 NA NA 0 273 #> 702 TCGA-A8-A07S-01 0 243 0 243 NA NA 0 243 #> 703 TCGA-A8-A07U-01 0 760 0 760 0 760 0 760 #> 704 TCGA-A8-A07W-01 0 304 0 304 NA NA 0 304 #> 705 TCGA-A8-A07Z-01 0 1371 0 1371 0 1371 0 1371 #> 706 TCGA-A8-A081-01 0 0 0 0 0 0 0 0 #> 707 TCGA-A8-A082-01 0 549 0 549 0 549 0 549 #> 708 TCGA-A8-A083-01 0 0 0 0 0 0 0 0 #> 709 TCGA-A8-A084-01 0 458 0 458 NA NA 0 458 #> 710 TCGA-A8-A085-01 0 1124 0 1124 0 1124 0 1124 #> 711 TCGA-A8-A086-01 0 396 0 396 0 396 0 396 #> 712 TCGA-A8-A08A-01 0 30 0 30 0 30 0 30 #> 713 TCGA-A8-A08B-01 0 1156 0 1156 0 1156 0 1156 #> 714 TCGA-A8-A08C-01 0 881 0 881 0 881 0 881 #> 715 TCGA-A8-A08F-01 0 1004 0 1004 0 1004 0 1004 #> 716 TCGA-A8-A08G-01 0 607 0 607 0 607 0 607 #> 717 TCGA-A8-A08H-01 0 0 0 0 0 0 0 0 #> 718 TCGA-A8-A08I-01 0 365 0 365 0 365 0 365 #> 719 TCGA-A8-A08J-01 1 1127 1 1127 NA NA 1 1127 #> 720 TCGA-A8-A08L-01 1 304 0 304 0 304 0 304 #> 721 TCGA-A8-A08O-01 0 943 0 943 NA NA 1 762 #> 722 TCGA-A8-A08P-01 0 943 0 943 0 943 0 943 #> 723 TCGA-A8-A08R-01 0 30 0 30 0 30 0 30 #> 724 TCGA-A8-A08S-01 0 1004 0 1004 0 1004 0 1004 #> 725 TCGA-A8-A08T-01 1 3409 1 3409 NA NA 1 2557 #> 726 TCGA-A8-A08X-01 0 1308 0 1308 1 366 1 366 #> 727 TCGA-A8-A08Z-01 0 1217 0 1217 0 1217 0 1217 #> 728 TCGA-A8-A090-01 0 0 0 0 0 0 0 0 #> 729 TCGA-A8-A091-01 0 1004 0 1004 1 243 1 243 #> 730 TCGA-A8-A092-01 0 942 0 942 0 942 0 942 #> 731 TCGA-A8-A093-01 0 546 0 546 0 546 0 546 #> 732 TCGA-A8-A094-01 0 0 0 0 0 0 0 0 #> 733 TCGA-A8-A095-01 0 1277 0 1277 0 1277 0 1277 #> 734 TCGA-A8-A096-01 0 0 0 0 0 0 0 0 #> 735 TCGA-A8-A097-01 0 365 0 365 0 365 0 365 #> 736 TCGA-A8-A099-01 0 304 0 304 NA NA 0 304 #> 737 TCGA-A8-A09A-01 0 304 0 304 NA NA 0 304 #> 738 TCGA-A8-A09B-01 0 365 0 365 0 365 0 365 #> 739 TCGA-A8-A09C-01 0 31 0 31 NA NA 0 31 #> 740 TCGA-A8-A09D-01 0 1522 0 1522 0 1522 0 1522 #> 741 TCGA-A8-A09E-01 0 1492 0 1492 NA NA 0 1492 #> 742 TCGA-A8-A09G-01 0 0 0 0 0 0 0 0 #> 743 TCGA-A8-A09I-01 0 1371 0 1371 0 1371 0 1371 #> 744 TCGA-A8-A09K-01 0 912 0 912 0 912 0 912 #> 745 TCGA-A8-A09M-01 0 1006 0 1006 0 1006 0 1006 #> 746 TCGA-A8-A09N-01 0 31 0 31 0 31 0 31 #> 747 TCGA-A8-A09Q-01 0 761 0 761 NA NA 0 761 #> 748 TCGA-A8-A09R-01 0 273 0 273 0 273 0 273 #> 749 TCGA-A8-A09T-01 0 579 0 579 0 579 0 579 #> 750 TCGA-A8-A09V-01 0 457 0 457 0 457 0 457 #> 751 TCGA-A8-A09W-01 0 30 0 30 NA NA 0 30 #> 752 TCGA-A8-A09X-01 1 426 NA 426 NA NA 0 426 #> 753 TCGA-A8-A09Z-01 0 0 0 0 NA NA 0 0 #> 754 TCGA-A8-A0A1-01 0 365 0 365 0 365 0 365 #> 755 TCGA-A8-A0A2-01 0 579 0 579 0 579 0 579 #> 756 TCGA-A8-A0A4-01 0 396 0 396 0 396 0 396 #> 757 TCGA-A8-A0A6-01 0 640 0 640 0 640 0 640 #> 758 TCGA-A8-A0A7-01 0 30 0 30 0 30 0 30 #> 759 TCGA-A8-A0A9-01 0 822 0 822 0 822 0 822 #> 760 TCGA-A8-A0AB-01 0 518 0 518 0 518 0 518 #> 761 TCGA-A8-A0AD-01 0 1157 0 1157 0 1157 0 1157 #> 762 TCGA-AC-A23C-01 0 585 0 585 0 585 0 585 #> 763 TCGA-AC-A23E-01 0 698 0 698 0 698 0 698 #> 764 TCGA-AC-A23G-01 0 2248 0 2248 0 2248 0 2248 #> 765 TCGA-AC-A23H-01 1 174 1 174 NA NA 1 174 #> 766 TCGA-AC-A23H-11 1 174 1 174 NA NA 1 174 #> 767 TCGA-AC-A2B8-01 0 677 0 677 0 677 1 654 #> 768 TCGA-AC-A2BK-01 0 2222 0 2222 0 2222 0 2222 #> 769 TCGA-AC-A2BM-01 0 3022 0 3022 0 3022 0 3022 #> 770 TCGA-AC-A2FB-01 0 1234 0 1234 0 1234 0 1234 #> 771 TCGA-AC-A2FB-11 0 1234 0 1234 0 1234 0 1234 #> 772 TCGA-AC-A2FE-01 1 2636 1 2636 1 766 1 766 #> 773 TCGA-AC-A2FF-01 0 2759 0 2759 0 2759 0 2759 #> 774 TCGA-AC-A2FF-11 0 2759 0 2759 0 2759 0 2759 #> 775 TCGA-AC-A2FG-01 0 1853 0 1853 0 1853 0 1853 #> 776 TCGA-AC-A2FK-01 0 2650 0 2650 0 2650 0 2650 #> 777 TCGA-AC-A2FM-01 1 792 1 792 1 780 1 780 #> 778 TCGA-AC-A2FM-11 1 792 1 792 1 780 1 780 #> 779 TCGA-AC-A2FO-01 0 2255 0 2255 0 2255 0 2255 #> 780 TCGA-AC-A2QH-01 0 1005 0 1005 0 1005 0 1005 #> 781 TCGA-AC-A2QI-01 0 588 0 588 0 588 0 588 #> 782 TCGA-AC-A2QJ-01 1 446 1 446 1 237 1 237 #> 783 TCGA-AC-A3BB-01 0 987 0 987 0 987 0 987 #> 784 TCGA-AC-A3EH-01 1 197 0 197 0 197 0 197 #> 785 TCGA-AC-A3HN-01 0 496 0 496 0 496 0 496 #> 786 TCGA-AC-A3OD-01 0 451 0 451 0 451 0 451 #> 787 TCGA-AC-A3QP-01 0 675 0 675 0 675 0 675 #> 788 TCGA-AC-A3QQ-01 0 734 0 734 NA NA 0 734 #> 789 TCGA-AC-A3TM-01 0 762 0 762 0 762 0 762 #> 790 TCGA-AC-A3TN-01 0 456 0 456 0 456 0 456 #> 791 TCGA-AC-A3W5-01 0 504 0 504 NA NA 0 504 #> 792 TCGA-AC-A3W6-01 0 602 0 602 0 602 0 602 #> 793 TCGA-AC-A3W7-01 0 471 0 471 0 471 0 471 #> 794 TCGA-AC-A3YI-01 0 707 0 707 0 707 0 707 #> 795 TCGA-AC-A3YJ-01 0 754 0 754 0 754 0 754 #> 796 TCGA-AC-A4ZE-01 0 890 0 890 0 890 0 890 #> 797 TCGA-AC-A5EH-01 0 511 0 511 0 511 0 511 #> 798 TCGA-AC-A5XS-01 0 588 0 588 0 588 0 588 #> 799 TCGA-AC-A5XU-01 0 455 0 455 0 455 0 455 #> 800 TCGA-AC-A62V-01 1 348 1 348 NA NA 1 348 #> 801 TCGA-AC-A62X-01 0 417 0 417 0 417 0 417 #> 802 TCGA-AC-A62Y-01 0 530 0 530 NA NA 0 530 #> 803 TCGA-AC-A6IV-01 0 568 0 568 0 568 0 568 #> 804 TCGA-AC-A6IW-01 0 413 0 413 0 413 0 413 #> 805 TCGA-AC-A6IX-06 0 373 0 373 0 373 0 373 #> 806 TCGA-AC-A6IX-01 0 373 0 373 0 373 0 373 #> 807 TCGA-AC-A6NO-01 0 51 0 51 0 51 0 51 #> 808 TCGA-AC-A7VB-01 0 250 0 250 0 250 0 250 #> 809 TCGA-AC-A7VC-01 0 1 0 1 0 1 0 1 #> 810 TCGA-AC-A8OP-01 0 614 0 614 0 614 0 614 #> 811 TCGA-AC-A8OQ-01 0 34 0 34 0 34 0 34 #> 812 TCGA-AC-A8OR-01 0 40 0 40 0 40 0 40 #> 813 TCGA-AC-A8OS-01 0 70 0 70 0 70 0 70 #> 814 TCGA-AN-A03X-01 0 10 0 10 0 10 0 10 #> 815 TCGA-AN-A03Y-01 0 10 0 10 0 10 0 10 #> 816 TCGA-AN-A041-01 0 7 0 7 0 7 0 7 #> 817 TCGA-AN-A046-01 0 10 0 10 0 10 0 10 #> 818 TCGA-AN-A049-01 0 19 0 19 NA NA 0 19 #> 819 TCGA-AN-A04A-01 0 90 0 90 NA NA 0 90 #> 820 TCGA-AN-A04C-01 0 54 0 54 NA NA 0 54 #> 821 TCGA-AN-A04D-01 0 52 0 52 NA NA 0 52 #> 822 TCGA-AN-A0AJ-01 0 303 0 303 0 303 0 303 #> 823 TCGA-AN-A0AK-01 0 224 0 224 0 224 0 224 #> 824 TCGA-AN-A0AL-01 0 227 0 227 0 227 0 227 #> 825 TCGA-AN-A0AM-01 0 5 0 5 0 5 0 5 #> 826 TCGA-AN-A0AR-01 0 10 0 10 0 10 0 10 #> 827 TCGA-AN-A0AS-01 0 10 0 10 0 10 0 10 #> 828 TCGA-AN-A0AT-01 0 10 0 10 0 10 0 10 #> 829 TCGA-AN-A0FD-01 0 196 0 196 0 196 0 196 #> 830 TCGA-AN-A0FF-01 0 172 0 172 0 172 0 172 #> 831 TCGA-AN-A0FJ-01 0 242 0 242 NA NA 0 242 #> 832 TCGA-AN-A0FK-01 0 213 0 213 0 213 0 213 #> 833 TCGA-AN-A0FL-01 0 231 0 231 0 231 0 231 #> 834 TCGA-AN-A0FN-01 0 218 0 218 0 218 0 218 #> 835 TCGA-AN-A0FS-01 0 210 0 210 0 210 0 210 #> 836 TCGA-AN-A0FT-01 0 214 0 214 0 214 0 214 #> 837 TCGA-AN-A0FV-01 0 10 0 10 0 10 0 10 #> 838 TCGA-AN-A0FW-01 0 11 0 11 0 11 0 11 #> 839 TCGA-AN-A0FX-01 0 10 0 10 0 10 0 10 #> 840 TCGA-AN-A0FY-01 0 10 0 10 0 10 0 10 #> 841 TCGA-AN-A0FZ-01 0 10 0 10 0 10 0 10 #> 842 TCGA-AN-A0G0-01 0 16 0 16 0 16 0 16 #> 843 TCGA-AN-A0XL-01 0 163 0 163 0 163 0 163 #> 844 TCGA-AN-A0XN-01 0 10 0 10 0 10 0 10 #> 845 TCGA-AN-A0XO-01 0 375 0 375 0 375 0 375 #> 846 TCGA-AN-A0XP-01 0 9 0 9 0 9 0 9 #> 847 TCGA-AN-A0XR-01 0 10 0 10 0 10 0 10 #> 848 TCGA-AN-A0XS-01 0 10 0 10 0 10 0 10 #> 849 TCGA-AN-A0XT-01 0 10 0 10 0 10 0 10 #> 850 TCGA-AN-A0XU-01 0 10 0 10 0 10 0 10 #> 851 TCGA-AN-A0XV-01 0 162 0 162 0 162 0 162 #> 852 TCGA-AN-A0XW-01 0 170 0 170 0 170 0 170 #> 853 TCGA-AO-A03L-01 0 2442 0 2442 0 2442 0 2442 #> 854 TCGA-AO-A03M-01 0 1866 0 1866 0 1866 0 1866 #> 855 TCGA-AO-A03N-01 0 2031 0 2031 1 1645 1 1645 #> 856 TCGA-AO-A03O-01 1 2483 0 2483 0 2483 0 2483 #> 857 TCGA-AO-A03P-01 1 2911 1 2911 NA NA 1 1922 #> 858 TCGA-AO-A03R-01 0 2091 0 2091 0 2091 0 2091 #> 859 TCGA-AO-A03T-01 0 2124 0 2124 0 2124 0 2124 #> 860 TCGA-AO-A03U-01 1 1793 0 1793 0 1793 1 1614 #> 861 TCGA-AO-A03V-01 0 1351 0 1351 0 1351 0 1351 #> 862 TCGA-AO-A0J2-01 0 997 0 997 0 997 0 997 #> 863 TCGA-AO-A0J3-01 0 651 0 651 0 651 0 651 #> 864 TCGA-AO-A0J4-01 0 1587 0 1587 0 1587 0 1587 #> 865 TCGA-AO-A0J5-01 1 792 1 792 NA NA 1 792 #> 866 TCGA-AO-A0J6-01 0 1140 0 1140 0 1140 0 1140 #> 867 TCGA-AO-A0J7-01 0 618 0 618 0 618 0 618 #> 868 TCGA-AO-A0J8-01 0 680 0 680 0 680 0 680 #> 869 TCGA-AO-A0J9-01 0 1613 0 1613 1 1066 1 1066 #> 870 TCGA-AO-A0JA-01 0 655 0 655 1 143 1 143 #> 871 TCGA-AO-A0JB-01 0 1542 0 1542 0 1542 0 1542 #> 872 TCGA-AO-A0JC-01 0 1547 0 1547 0 1547 0 1547 #> 873 TCGA-AO-A0JD-01 0 2190 0 2190 0 2190 0 2190 #> 874 TCGA-AO-A0JE-01 0 2335 0 2335 NA NA 0 2335 #> 875 TCGA-AO-A0JF-01 0 1980 0 1980 0 1980 0 1980 #> 876 TCGA-AO-A0JG-01 0 798 0 798 NA NA 0 798 #> 877 TCGA-AO-A0JI-01 0 1528 0 1528 0 1528 0 1528 #> 878 TCGA-AO-A0JJ-01 0 1887 0 1887 0 1887 0 1887 #> 879 TCGA-AO-A0JL-01 0 1683 0 1683 0 1683 0 1683 #> 880 TCGA-AO-A0JM-01 0 2184 0 2184 0 2184 0 2184 #> 881 TCGA-AO-A124-01 0 3506 0 3506 0 3506 0 3506 #> 882 TCGA-AO-A125-01 0 3456 0 3456 0 3456 0 3456 #> 883 TCGA-AO-A126-01 0 3307 0 3307 1 267 1 267 #> 884 TCGA-AO-A128-01 0 3248 0 3248 0 3248 0 3248 #> 885 TCGA-AO-A129-01 0 3286 0 3286 0 3286 0 3286 #> 886 TCGA-AO-A12A-01 0 3112 0 3112 NA NA 0 3112 #> 887 TCGA-AO-A12B-01 0 2989 0 2989 0 2989 0 2989 #> 888 TCGA-AO-A12C-01 0 2372 0 2372 0 2372 0 2372 #> 889 TCGA-AO-A12D-01 0 2515 0 2515 0 2515 0 2515 #> 890 TCGA-AO-A12E-01 0 2142 0 2142 0 2142 0 2142 #> 891 TCGA-AO-A12F-01 0 1842 0 1842 0 1842 0 1842 #> 892 TCGA-AO-A12G-01 0 1639 0 1639 0 1639 0 1639 #> 893 TCGA-AO-A12H-01 0 1234 0 1234 0 1234 0 1234 #> 894 TCGA-AO-A1KO-01 0 622 0 622 0 622 0 622 #> 895 TCGA-AO-A1KP-01 0 2953 0 2953 0 2953 0 2953 #> 896 TCGA-AO-A1KQ-01 0 1882 0 1882 0 1882 0 1882 #> 897 TCGA-AO-A1KR-01 0 2513 0 2513 0 2513 0 2513 #> 898 TCGA-AO-A1KS-01 0 350 0 350 0 350 0 350 #> 899 TCGA-AO-A1KT-01 0 541 0 541 0 541 0 541 #> 900 TCGA-AQ-A04H-01 0 754 0 754 0 754 0 754 #> 901 TCGA-AQ-A04J-01 0 819 0 819 0 819 0 819 #> 902 TCGA-AQ-A04L-01 0 3957 0 3957 0 3957 0 3957 #> 903 TCGA-AQ-A0Y5-01 1 172 0 172 0 172 0 172 #> 904 TCGA-AQ-A1H2-01 0 475 0 475 0 475 0 475 #> 905 TCGA-AQ-A1H3-01 0 989 0 989 0 989 0 989 #> 906 TCGA-AQ-A54N-01 0 78 0 78 0 78 0 78 #> 907 TCGA-AQ-A54O-01 0 1001 0 1001 0 1001 0 1001 #> 908 TCGA-AQ-A7U7-01 1 584 0 584 0 584 0 584 #> 909 TCGA-AR-A0TP-01 0 4275 0 4275 0 4275 0 4275 #> 910 TCGA-AR-A0TQ-01 0 2991 0 2991 0 2991 0 2991 #> 911 TCGA-AR-A0TR-01 1 160 NA 160 0 160 0 160 #> 912 TCGA-AR-A0TS-01 0 2558 0 2558 0 2558 0 2558 #> 913 TCGA-AR-A0TT-01 0 3316 0 3316 0 3316 0 3316 #> 914 TCGA-AR-A0TU-01 0 709 0 709 0 709 0 709 #> 915 TCGA-AR-A0TV-01 0 2288 0 2288 0 2288 0 2288 #> 916 TCGA-AR-A0TW-01 0 3009 0 3009 1 739 1 739 #> 917 TCGA-AR-A0TX-01 0 1972 0 1972 0 1972 0 1972 #> 918 TCGA-AR-A0TY-01 1 1699 1 1699 1 544 1 544 #> 919 TCGA-AR-A0TZ-01 1 3262 NA 3262 1 1313 1 1313 #> 920 TCGA-AR-A0U0-01 0 1988 0 1988 0 1988 0 1988 #> 921 TCGA-AR-A0U2-01 1 2551 1 2551 1 1609 1 1609 #> 922 TCGA-AR-A0U3-01 0 4080 0 4080 0 4080 0 4080 #> 923 TCGA-AR-A0U4-01 0 3261 0 3261 0 3261 0 3261 #> 924 TCGA-AR-A1AH-01 0 3807 0 3807 0 3807 1 1136 #> 925 TCGA-AR-A1AI-01 0 3296 0 3296 1 588 1 588 #> 926 TCGA-AR-A1AJ-01 0 3072 0 3072 0 3072 0 3072 #> 927 TCGA-AR-A1AK-01 0 3159 0 3159 0 3159 0 3159 #> 928 TCGA-AR-A1AL-01 0 2971 0 2971 0 2971 0 2971 #> 929 TCGA-AR-A1AM-01 0 2991 0 2991 0 2991 0 2991 #> 930 TCGA-AR-A1AN-01 0 2920 0 2920 0 2920 0 2920 #> 931 TCGA-AR-A1AO-01 0 2618 0 2618 0 2618 0 2618 #> 932 TCGA-AR-A1AP-01 0 2856 0 2856 0 2856 0 2856 #> 933 TCGA-AR-A1AQ-01 0 3021 0 3021 0 3021 0 3021 #> 934 TCGA-AR-A1AR-01 1 524 1 524 1 268 1 268 #> 935 TCGA-AR-A1AS-01 0 1150 0 1150 0 1150 0 1150 #> 936 TCGA-AR-A1AT-01 1 1272 NA 1272 0 1272 0 1272 #> 937 TCGA-AR-A1AU-01 0 2868 0 2868 0 2868 0 2868 #> 938 TCGA-AR-A1AV-01 0 1864 0 1864 0 1864 0 1864 #> 939 TCGA-AR-A1AW-01 0 2632 0 2632 0 2632 0 2632 #> 940 TCGA-AR-A1AX-01 0 2629 0 2629 0 2629 0 2629 #> 941 TCGA-AR-A1AY-01 0 1026 0 1026 0 1026 0 1026 #> 942 TCGA-AR-A24H-01 0 4894 0 4894 0 4894 0 4894 #> 943 TCGA-AR-A24K-01 0 1548 0 1548 0 1548 0 1548 #> 944 TCGA-AR-A24L-01 1 2866 1 2866 1 1414 1 1414 #> 945 TCGA-AR-A24M-01 0 3660 0 3660 0 3660 0 3660 #> 946 TCGA-AR-A24N-01 0 3035 0 3035 0 3035 0 3035 #> 947 TCGA-AR-A24O-01 0 3607 0 3607 1 2561 1 2561 #> 948 TCGA-AR-A24P-01 0 84 0 84 0 84 0 84 #> 949 TCGA-AR-A24Q-01 0 3172 0 3172 0 3172 0 3172 #> 950 TCGA-AR-A24R-01 0 3430 0 3430 0 3430 0 3430 #> 951 TCGA-AR-A24S-01 0 2976 0 2976 0 2976 0 2976 #> 952 TCGA-AR-A24T-01 0 3202 0 3202 0 3202 0 3202 #> 953 TCGA-AR-A24U-01 0 3128 0 3128 0 3128 0 3128 #> 954 TCGA-AR-A24V-01 0 3203 0 3203 0 3203 0 3203 #> 955 TCGA-AR-A24W-01 0 1550 0 1550 0 1550 0 1550 #> 956 TCGA-AR-A24X-01 0 3004 0 3004 0 3004 0 3004 #> 957 TCGA-AR-A24Z-01 0 3001 0 3001 0 3001 0 3001 #> 958 TCGA-AR-A250-01 0 2707 0 2707 0 2707 0 2707 #> 959 TCGA-AR-A251-01 0 3030 0 3030 0 3030 0 3030 #> 960 TCGA-AR-A252-01 0 2838 0 2838 0 2838 0 2838 #> 961 TCGA-AR-A254-01 0 2605 0 2605 0 2605 0 2605 #> 962 TCGA-AR-A255-01 0 2161 0 2161 0 2161 0 2161 #> 963 TCGA-AR-A256-01 1 2854 NA 2854 1 1640 1 1640 #> 964 TCGA-AR-A2LE-01 0 5062 0 5062 0 5062 1 4203 #> 965 TCGA-AR-A2LH-01 1 616 NA 616 1 434 1 434 #> 966 TCGA-AR-A2LJ-01 0 2632 0 2632 0 2632 0 2632 #> 967 TCGA-AR-A2LK-01 1 1649 NA 1649 1 1304 1 1304 #> 968 TCGA-AR-A2LL-01 0 2012 0 2012 0 2012 0 2012 #> 969 TCGA-AR-A2LM-01 0 1935 0 1935 0 1935 0 1935 #> 970 TCGA-AR-A2LN-01 0 1161 0 1161 0 1161 0 1161 #> 971 TCGA-AR-A2LO-01 0 1198 0 1198 0 1198 0 1198 #> 972 TCGA-AR-A2LQ-01 0 1233 0 1233 0 1233 0 1233 #> 973 TCGA-AR-A2LR-01 0 1742 0 1742 0 1742 0 1742 #> 974 TCGA-AR-A5QM-01 0 2231 0 2231 NA NA 1 968 #> 975 TCGA-AR-A5QN-01 0 1013 0 1013 NA NA 0 1013 #> 976 TCGA-AR-A5QP-01 0 1185 0 1185 NA NA 0 1185 #> 977 TCGA-AR-A5QQ-01 1 322 1 322 NA NA 1 301 #> 978 TCGA-B6-A0I1-01 1 2361 0 2361 1 1120 1 1120 #> 979 TCGA-B6-A0I2-01 0 4361 0 4361 NA NA 0 4361 #> 980 TCGA-B6-A0I5-01 0 8556 0 8556 0 8556 0 8556 #> 981 TCGA-B6-A0I6-01 1 991 1 991 1 859 1 859 #> 982 TCGA-B6-A0I8-01 1 749 1 749 NA NA 1 746 #> 983 TCGA-B6-A0I9-01 1 362 1 362 NA NA 1 362 #> 984 TCGA-B6-A0IA-01 0 8391 0 8391 0 8391 0 8391 #> 985 TCGA-B6-A0IB-01 1 3941 1 3941 NA NA 1 2717 #> 986 TCGA-B6-A0IC-01 1 1542 0 1542 0 1542 0 1542 #> 987 TCGA-B6-A0IE-01 1 1993 1 1993 1 834 1 834 #> 988 TCGA-B6-A0IG-01 1 4456 1 4456 NA NA 1 4456 #> 989 TCGA-B6-A0IH-01 1 3418 NA 3418 0 3418 0 3418 #> 990 TCGA-B6-A0IJ-01 0 7106 0 7106 0 7106 0 7106 #> 991 TCGA-B6-A0IK-01 1 571 1 571 1 489 1 489 #> 992 TCGA-B6-A0IM-01 1 3873 0 3873 0 3873 0 3873 #> 993 TCGA-B6-A0IN-01 1 2573 1 2573 1 1412 1 1412 #> 994 TCGA-B6-A0IO-01 0 5042 0 5042 0 5042 0 5042 #> 995 TCGA-B6-A0IP-01 1 3926 0 3926 0 3926 0 3926 #> 996 TCGA-B6-A0IQ-01 0 4285 0 4285 0 4285 0 4285 #> 997 TCGA-B6-A0RE-01 0 7777 0 7777 0 7777 0 7777 #> 998 TCGA-B6-A0RG-01 0 2082 0 2082 0 2082 0 2082 #> 999 TCGA-B6-A0RH-01 1 6456 0 6456 1 2165 1 2165 #> 1000 TCGA-B6-A0RI-01 0 7126 0 7126 1 1100 1 1100 #> 1001 TCGA-B6-A0RL-01 1 2469 0 2469 0 2469 0 2469 #> 1002 TCGA-B6-A0RM-01 1 2373 0 2373 NA NA 0 2373 #> 1003 TCGA-B6-A0RN-01 0 8008 0 8008 0 8008 0 8008 #> 1004 TCGA-B6-A0RO-01 0 4929 0 4929 0 4929 0 4929 #> 1005 TCGA-B6-A0RP-01 1 3126 1 3126 1 2787 1 2787 #> 1006 TCGA-B6-A0RQ-01 1 4267 0 4267 0 4267 0 4267 #> 1007 TCGA-B6-A0RS-01 1 3063 1 3063 1 2041 1 2041 #> 1008 TCGA-B6-A0RT-01 0 2721 0 2721 NA NA 0 2721 #> 1009 TCGA-B6-A0RU-01 0 8605 0 8605 1 3076 1 3076 #> 1010 TCGA-B6-A0RV-01 0 5156 0 5156 0 5156 0 5156 #> 1011 TCGA-B6-A0WS-01 1 2965 0 2965 NA NA 0 2965 #> 1012 TCGA-B6-A0WT-01 0 5739 0 5739 1 3862 1 3862 #> 1013 TCGA-B6-A0WV-01 1 2417 0 2417 0 2417 0 2417 #> 1014 TCGA-B6-A0WW-01 1 558 1 558 1 447 1 447 #> 1015 TCGA-B6-A0WX-01 1 639 1 639 1 563 1 563 #> 1016 TCGA-B6-A0WY-01 1 3461 1 3461 1 2011 1 2011 #> 1017 TCGA-B6-A0WZ-01 0 6292 0 6292 0 6292 1 5117 #> 1018 TCGA-B6-A0X0-01 1 3945 NA 3945 0 3945 0 3945 #> 1019 TCGA-B6-A0X1-01 1 7455 0 7455 1 490 1 490 #> 1020 TCGA-B6-A0X4-01 1 860 1 860 1 716 1 716 #> 1021 TCGA-B6-A0X5-01 1 2097 1 2097 1 1343 1 1343 #> 1022 TCGA-B6-A0X7-01 1 1781 0 1781 NA NA 1 1104 #> 1023 TCGA-B6-A1KC-01 0 1326 0 1326 0 1326 0 1326 #> 1024 TCGA-B6-A1KF-01 0 3088 0 3088 0 3088 0 3088 #> 1025 TCGA-B6-A1KI-01 0 2236 0 2236 0 2236 0 2236 #> 1026 TCGA-B6-A1KN-01 0 4233 0 4233 0 4233 0 4233 #> 1027 TCGA-B6-A2IU-01 0 5176 0 5176 0 5176 1 4224 #> 1028 TCGA-B6-A3ZX-01 1 1152 1 1152 NA NA 1 994 #> 1029 TCGA-B6-A400-01 0 215 0 215 0 215 0 215 #> 1030 TCGA-B6-A401-01 0 2596 0 2596 0 2596 0 2596 #> 1031 TCGA-B6-A402-01 0 2281 0 2281 1 1516 1 1516 #> 1032 TCGA-B6-A408-01 0 2072 0 2072 0 2072 0 2072 #> 1033 TCGA-B6-A409-01 1 573 1 573 1 456 1 456 #> 1034 TCGA-B6-A40B-01 0 3152 0 3152 0 3152 0 3152 #> 1035 TCGA-B6-A40C-01 0 2164 0 2164 0 2164 0 2164 #> 1036 TCGA-BH-A0AU-01 0 1914 0 1914 0 1914 0 1914 #> 1037 TCGA-BH-A0AU-11 0 1914 0 1914 0 1914 0 1914 #> 1038 TCGA-BH-A0AV-01 0 1820 0 1820 0 1820 0 1820 #> 1039 TCGA-BH-A0AW-01 0 622 0 622 0 622 0 622 #> 1040 TCGA-BH-A0AY-11 0 777 0 777 0 777 0 777 #> 1041 TCGA-BH-A0AZ-01 0 1919 0 1919 0 1919 0 1919 #> 1042 TCGA-BH-A0AZ-11 0 1919 0 1919 0 1919 0 1919 #> 1043 TCGA-BH-A0B0-01 0 2477 0 2477 0 2477 0 2477 #> 1044 TCGA-BH-A0B1-01 0 1148 0 1148 0 1148 0 1148 #> 1045 TCGA-BH-A0B3-01 0 1203 0 1203 0 1203 0 1203 #> 1046 TCGA-BH-A0B3-11 0 1203 0 1203 0 1203 0 1203 #> 1047 TCGA-BH-A0B4-01 0 1191 0 1191 0 1191 0 1191 #> 1048 TCGA-BH-A0B5-01 0 2136 0 2136 NA NA 0 2136 #> 1049 TCGA-BH-A0B5-11 0 2136 0 2136 NA NA 0 2136 #> 1050 TCGA-BH-A0B6-01 0 2483 0 2483 0 2483 0 2483 #> 1051 TCGA-BH-A0B7-01 0 2559 0 2559 0 2559 0 2559 #> 1052 TCGA-BH-A0B7-11 0 2559 0 2559 0 2559 0 2559 #> 1053 TCGA-BH-A0B8-01 0 1569 0 1569 0 1569 0 1569 #> 1054 TCGA-BH-A0B8-11 0 1569 0 1569 0 1569 0 1569 #> 1055 TCGA-BH-A0B9-01 0 1572 0 1572 0 1572 0 1572 #> 1056 TCGA-BH-A0BA-01 0 1132 0 1132 0 1132 0 1132 #> 1057 TCGA-BH-A0BA-11 0 1132 0 1132 0 1132 0 1132 #> 1058 TCGA-BH-A0BC-01 0 974 0 974 0 974 0 974 #> 1059 TCGA-BH-A0BC-11 0 974 0 974 0 974 0 974 #> 1060 TCGA-BH-A0BD-01 0 554 0 554 0 554 0 554 #> 1061 TCGA-BH-A0BF-01 1 1324 0 1324 0 1324 0 1324 #> 1062 TCGA-BH-A0BG-01 0 1871 0 1871 0 1871 0 1871 #> 1063 TCGA-BH-A0BJ-01 0 660 0 660 0 660 0 660 #> 1064 TCGA-BH-A0BJ-11 0 660 0 660 0 660 0 660 #> 1065 TCGA-BH-A0BL-01 0 2278 0 2278 0 2278 0 2278 #> 1066 TCGA-BH-A0BM-01 0 1876 0 1876 0 1876 0 1876 #> 1067 TCGA-BH-A0BM-11 0 1876 0 1876 0 1876 0 1876 #> 1068 TCGA-BH-A0BO-01 0 2197 0 2197 0 2197 0 2197 #> 1069 TCGA-BH-A0BP-01 1 2296 0 2296 0 2296 0 2296 #> 1070 TCGA-BH-A0BQ-01 0 2255 0 2255 1 1709 1 1709 #> 1071 TCGA-BH-A0BQ-11 0 2255 0 2255 1 1709 1 1709 #> 1072 TCGA-BH-A0BR-01 0 2330 0 2330 0 2330 0 2330 #> 1073 TCGA-BH-A0BS-01 0 2612 0 2612 0 2612 0 2612 #> 1074 TCGA-BH-A0BS-11 0 2612 0 2612 0 2612 0 2612 #> 1075 TCGA-BH-A0BT-01 0 2365 0 2365 0 2365 0 2365 #> 1076 TCGA-BH-A0BT-11 0 2365 0 2365 0 2365 0 2365 #> 1077 TCGA-BH-A0BV-01 0 1519 0 1519 0 1519 0 1519 #> 1078 TCGA-BH-A0BV-11 0 1519 0 1519 0 1519 0 1519 #> 1079 TCGA-BH-A0BW-01 0 2371 0 2371 0 2371 0 2371 #> 1080 TCGA-BH-A0BW-11 0 2371 0 2371 0 2371 0 2371 #> 1081 TCGA-BH-A0BZ-01 0 2255 0 2255 0 2255 0 2255 #> 1082 TCGA-BH-A0BZ-11 0 2255 0 2255 0 2255 0 2255 #> 1083 TCGA-BH-A0C0-01 0 1270 0 1270 0 1270 0 1270 #> 1084 TCGA-BH-A0C0-11 0 1270 0 1270 0 1270 0 1270 #> 1085 TCGA-BH-A0C1-01 1 1411 1 1411 1 1123 1 1123 #> 1086 TCGA-BH-A0C3-01 0 2709 0 2709 1 2674 1 2674 #> 1087 TCGA-BH-A0C3-11 0 2709 0 2709 1 2674 1 2674 #> 1088 TCGA-BH-A0C7-01 0 2767 0 2767 0 2767 0 2767 #> 1089 TCGA-BH-A0DD-01 0 2486 0 2486 0 2486 0 2486 #> 1090 TCGA-BH-A0DD-11 0 2486 0 2486 0 2486 0 2486 #> 1091 TCGA-BH-A0DE-01 0 2372 0 2372 0 2372 0 2372 #> 1092 TCGA-BH-A0DG-01 0 2041 0 2041 0 2041 0 2041 #> 1093 TCGA-BH-A0DG-11 0 2041 0 2041 0 2041 0 2041 #> 1094 TCGA-BH-A0DH-01 0 1156 0 1156 0 1156 0 1156 #> 1095 TCGA-BH-A0DH-11 0 1156 0 1156 0 1156 0 1156 #> 1096 TCGA-BH-A0DI-01 0 912 0 912 0 912 0 912 #> 1097 TCGA-BH-A0DK-01 0 423 0 423 0 423 0 423 #> 1098 TCGA-BH-A0DK-11 0 423 0 423 0 423 0 423 #> 1099 TCGA-BH-A0DL-01 0 2381 0 2381 0 2381 0 2381 #> 1100 TCGA-BH-A0DL-11 0 2381 0 2381 0 2381 0 2381 #> 1101 TCGA-BH-A0DO-01 0 1644 0 1644 0 1644 0 1644 #> 1102 TCGA-BH-A0DO-11 0 1644 0 1644 0 1644 0 1644 #> 1103 TCGA-BH-A0DP-01 0 476 0 476 0 476 0 476 #> 1104 TCGA-BH-A0DP-11 0 476 0 476 0 476 0 476 #> 1105 TCGA-BH-A0DQ-01 0 98 0 98 0 98 0 98 #> 1106 TCGA-BH-A0DQ-11 0 98 0 98 0 98 0 98 #> 1107 TCGA-BH-A0DS-01 0 78 0 78 0 78 0 78 #> 1108 TCGA-BH-A0DT-01 0 2403 0 2403 0 2403 0 2403 #> 1109 TCGA-BH-A0DT-11 0 2403 0 2403 0 2403 0 2403 #> 1110 TCGA-BH-A0DV-01 0 2064 0 2064 0 2064 0 2064 #> 1111 TCGA-BH-A0DV-11 0 2064 0 2064 0 2064 0 2064 #> 1112 TCGA-BH-A0DX-01 0 2156 0 2156 0 2156 0 2156 #> 1113 TCGA-BH-A0DZ-01 0 495 0 495 0 495 0 495 #> 1114 TCGA-BH-A0DZ-11 0 495 0 495 0 495 0 495 #> 1115 TCGA-BH-A0E0-01 0 134 0 134 0 134 0 134 #> 1116 TCGA-BH-A0E0-11 0 134 0 134 0 134 0 134 #> 1117 TCGA-BH-A0E1-01 0 477 0 477 0 477 0 477 #> 1118 TCGA-BH-A0E1-11 0 477 0 477 0 477 0 477 #> 1119 TCGA-BH-A0E2-01 0 435 0 435 0 435 0 435 #> 1120 TCGA-BH-A0E6-01 0 293 0 293 0 293 0 293 #> 1121 TCGA-BH-A0E7-01 0 1363 0 1363 0 1363 0 1363 #> 1122 TCGA-BH-A0E9-01 0 2489 0 2489 0 2489 0 2489 #> 1123 TCGA-BH-A0EA-01 1 991 0 991 0 991 0 991 #> 1124 TCGA-BH-A0EB-01 0 745 0 745 0 745 0 745 #> 1125 TCGA-BH-A0EE-01 0 943 0 943 0 943 0 943 #> 1126 TCGA-BH-A0EI-01 0 1926 0 1926 0 1926 0 1926 #> 1127 TCGA-BH-A0GY-01 0 923 0 923 0 923 0 923 #> 1128 TCGA-BH-A0GZ-01 0 328 0 328 0 328 0 328 #> 1129 TCGA-BH-A0H0-01 0 461 0 461 0 461 0 461 #> 1130 TCGA-BH-A0H3-01 0 1928 0 1928 0 1928 0 1928 #> 1131 TCGA-BH-A0H5-01 0 1620 0 1620 0 1620 0 1620 #> 1132 TCGA-BH-A0H5-11 0 1620 0 1620 0 1620 0 1620 #> 1133 TCGA-BH-A0H6-01 0 747 0 747 0 747 0 747 #> 1134 TCGA-BH-A0H7-01 0 702 0 702 0 702 0 702 #> 1135 TCGA-BH-A0H7-11 0 702 0 702 0 702 0 702 #> 1136 TCGA-BH-A0H9-01 0 1247 0 1247 0 1247 0 1247 #> 1137 TCGA-BH-A0H9-11 0 1247 0 1247 0 1247 0 1247 #> 1138 TCGA-BH-A0HA-01 0 1611 0 1611 0 1611 0 1611 #> 1139 TCGA-BH-A0HA-11 0 1611 0 1611 0 1611 0 1611 #> 1140 TCGA-BH-A0HB-01 0 806 0 806 0 806 0 806 #> 1141 TCGA-BH-A0HF-01 0 727 0 727 0 727 0 727 #> 1142 TCGA-BH-A0HI-01 0 620 0 620 0 620 0 620 #> 1143 TCGA-BH-A0HK-01 0 178 0 178 0 178 0 178 #> 1144 TCGA-BH-A0HK-11 0 178 0 178 0 178 0 178 #> 1145 TCGA-BH-A0HL-01 0 72 0 72 0 72 0 72 #> 1146 TCGA-BH-A0HN-01 0 516 0 516 0 516 0 516 #> 1147 TCGA-BH-A0HO-01 0 76 0 76 0 76 0 76 #> 1148 TCGA-BH-A0HP-01 0 414 0 414 0 414 0 414 #> 1149 TCGA-BH-A0HQ-01 0 1121 0 1121 0 1121 0 1121 #> 1150 TCGA-BH-A0HU-01 0 392 0 392 0 392 0 392 #> 1151 TCGA-BH-A0HW-01 0 1561 0 1561 0 1561 0 1561 #> 1152 TCGA-BH-A0HX-01 0 829 0 829 0 829 0 829 #> 1153 TCGA-BH-A0HY-01 0 1545 0 1545 0 1545 0 1545 #> 1154 TCGA-BH-A0RX-01 0 170 0 170 0 170 0 170 #> 1155 TCGA-BH-A0W3-01 0 728 0 728 NA NA 0 728 #> 1156 TCGA-BH-A0W4-01 0 759 0 759 NA NA 0 759 #> 1157 TCGA-BH-A0W5-01 0 1288 0 1288 0 1288 0 1288 #> 1158 TCGA-BH-A0W7-01 0 1363 0 1363 0 1363 0 1363 #> 1159 TCGA-BH-A0WA-01 0 701 0 701 0 701 0 701 #> 1160 TCGA-BH-A18F-01 0 1001 0 1001 0 1001 0 1001 #> 1161 TCGA-BH-A18G-01 0 149 0 149 0 149 0 149 #> 1162 TCGA-BH-A18H-01 0 652 0 652 0 652 0 652 #> 1163 TCGA-BH-A18I-01 0 1093 0 1093 0 1093 0 1093 #> 1164 TCGA-BH-A18J-01 1 612 1 612 NA NA 1 612 #> 1165 TCGA-BH-A18J-11 1 612 1 612 NA NA 1 612 #> 1166 TCGA-BH-A18K-01 1 2763 1 2763 NA NA 1 2763 #> 1167 TCGA-BH-A18K-11 1 2763 1 2763 NA NA 1 2763 #> 1168 TCGA-BH-A18L-01 1 811 NA 811 0 811 0 811 #> 1169 TCGA-BH-A18L-11 1 811 NA 811 0 811 0 811 #> 1170 TCGA-BH-A18M-01 1 2207 NA 2207 0 2207 0 2207 #> 1171 TCGA-BH-A18M-11 1 2207 NA 2207 0 2207 0 2207 #> 1172 TCGA-BH-A18N-01 1 1148 NA 1148 0 1148 0 1148 #> 1173 TCGA-BH-A18N-11 1 1148 NA 1148 0 1148 0 1148 #> 1174 TCGA-BH-A18P-01 1 921 1 921 NA NA 1 921 #> 1175 TCGA-BH-A18P-11 1 921 1 921 NA NA 1 921 #> 1176 TCGA-BH-A18Q-01 1 1692 NA 1692 0 1692 0 1692 #> 1177 TCGA-BH-A18Q-11 1 1692 NA 1692 0 1692 0 1692 #> 1178 TCGA-BH-A18R-01 1 1142 0 1142 0 1142 0 1142 #> 1179 TCGA-BH-A18R-11 1 1142 0 1142 0 1142 0 1142 #> 1180 TCGA-BH-A18S-01 1 2009 0 2009 0 2009 0 2009 #> 1181 TCGA-BH-A18S-11 1 2009 0 2009 0 2009 0 2009 #> 1182 TCGA-BH-A18T-01 1 224 1 224 NA NA 1 224 #> 1183 TCGA-BH-A18U-01 1 1563 0 1563 0 1563 0 1563 #> 1184 TCGA-BH-A18U-11 1 1563 0 1563 0 1563 0 1563 #> 1185 TCGA-BH-A18V-06 1 1556 NA 1556 0 1556 0 1556 #> 1186 TCGA-BH-A18V-01 1 1556 NA 1556 0 1556 0 1556 #> 1187 TCGA-BH-A18V-11 1 1556 NA 1556 0 1556 0 1556 #> 1188 TCGA-BH-A1EN-01 1 2127 0 2127 0 2127 0 2127 #> 1189 TCGA-BH-A1EN-11 1 2127 0 2127 0 2127 0 2127 #> 1190 TCGA-BH-A1EO-01 1 2798 0 2798 NA NA 0 2798 #> 1191 TCGA-BH-A1EO-11 1 2798 0 2798 NA NA 0 2798 #> 1192 TCGA-BH-A1ES-06 1 3462 1 3462 NA NA 1 3462 #> 1193 TCGA-BH-A1ES-01 1 3462 1 3462 NA NA 1 3462 #> 1194 TCGA-BH-A1ET-01 1 2520 0 2520 NA NA 0 2520 #> 1195 TCGA-BH-A1ET-11 1 2520 0 2520 NA NA 0 2520 #> 1196 TCGA-BH-A1EU-01 1 1286 0 1286 NA NA 0 1286 #> 1197 TCGA-BH-A1EU-11 1 1286 0 1286 NA NA 0 1286 #> 1198 TCGA-BH-A1EV-01 1 365 1 365 NA NA 1 365 #> 1199 TCGA-BH-A1EV-11 1 365 1 365 NA NA 1 365 #> 1200 TCGA-BH-A1EW-01 1 1694 1 1694 NA NA 1 1694 #> 1201 TCGA-BH-A1EW-11 1 1694 1 1694 NA NA 1 1694 #> 1202 TCGA-BH-A1EX-01 1 1508 1 1508 NA NA 1 1508 #> 1203 TCGA-BH-A1EY-01 1 538 1 538 NA NA 1 396 #> 1204 TCGA-BH-A1F0-01 1 785 1 785 NA NA 1 785 #> 1205 TCGA-BH-A1F0-11 1 785 1 785 NA NA 1 785 #> 1206 TCGA-BH-A1F2-01 1 959 0 959 NA NA 0 959 #> 1207 TCGA-BH-A1F2-11 1 959 0 959 NA NA 0 959 #> 1208 TCGA-BH-A1F5-01 1 2712 0 2712 NA NA 0 2712 #> 1209 TCGA-BH-A1F6-01 1 2965 NA 2965 NA NA 0 2965 #> 1210 TCGA-BH-A1F6-11 1 2965 NA 2965 NA NA 0 2965 #> 1211 TCGA-BH-A1F8-01 1 763 1 763 NA NA 1 763 #> 1212 TCGA-BH-A1F8-11 1 763 1 763 NA NA 1 763 #> 1213 TCGA-BH-A1FB-01 1 3669 1 3669 NA NA 1 3669 #> 1214 TCGA-BH-A1FB-11 1 3669 1 3669 NA NA 1 3669 #> 1215 TCGA-BH-A1FC-01 1 3472 0 3472 NA NA 0 3472 #> 1216 TCGA-BH-A1FC-11 1 3472 0 3472 NA NA 0 3472 #> 1217 TCGA-BH-A1FD-01 1 1009 1 1009 NA NA 1 1009 #> 1218 TCGA-BH-A1FD-11 1 1009 1 1009 NA NA 1 1009 #> 1219 TCGA-BH-A1FE-06 1 2273 1 2273 NA NA 1 2273 #> 1220 TCGA-BH-A1FE-01 1 2273 1 2273 NA NA 1 2273 #> 1221 TCGA-BH-A1FE-11 1 2273 1 2273 NA NA 1 2273 #> 1222 TCGA-BH-A1FG-01 1 3736 NA 3736 NA NA 0 3736 #> 1223 TCGA-BH-A1FG-11 1 3736 NA 3736 NA NA 0 3736 #> 1224 TCGA-BH-A1FH-01 1 1034 1 1034 NA NA 1 1034 #> 1225 TCGA-BH-A1FH-11 1 1034 1 1034 NA NA 1 1034 #> 1226 TCGA-BH-A1FJ-01 1 1927 NA 1927 NA NA 0 1927 #> 1227 TCGA-BH-A1FJ-11 1 1927 NA 1927 NA NA 0 1927 #> 1228 TCGA-BH-A1FL-01 1 1673 1 1673 NA NA 1 1673 #> 1229 TCGA-BH-A1FM-01 1 1388 NA 1388 NA NA 0 1388 #> 1230 TCGA-BH-A1FM-11 1 1388 NA 1388 NA NA 0 1388 #> 1231 TCGA-BH-A1FN-01 1 2192 1 2192 NA NA 1 2192 #> 1232 TCGA-BH-A1FN-11 1 2192 1 2192 NA NA 1 2192 #> 1233 TCGA-BH-A1FR-01 1 1642 1 1642 NA NA 1 1642 #> 1234 TCGA-BH-A1FR-11 1 1642 1 1642 NA NA 1 1642 #> 1235 TCGA-BH-A1FU-01 1 1688 1 1688 NA NA 1 1688 #> 1236 TCGA-BH-A1FU-11 1 1688 1 1688 NA NA 1 1688 #> 1237 TCGA-BH-A201-01 0 856 0 856 NA NA 0 856 #> 1238 TCGA-BH-A202-01 0 795 0 795 NA NA 0 795 #> 1239 TCGA-BH-A203-01 1 1174 1 1174 NA NA 1 1174 #> 1240 TCGA-BH-A203-11 1 1174 1 1174 NA NA 1 1174 #> 1241 TCGA-BH-A204-01 1 2534 NA 2534 NA NA 0 2534 #> 1242 TCGA-BH-A204-11 1 2534 NA 2534 NA NA 0 2534 #> 1243 TCGA-BH-A208-01 1 1759 0 1759 NA NA 0 1759 #> 1244 TCGA-BH-A208-11 1 1759 0 1759 NA NA 0 1759 #> 1245 TCGA-BH-A209-01 1 3959 0 3959 NA NA 0 3959 #> 1246 TCGA-BH-A209-11 1 3959 0 3959 NA NA 0 3959 #> 1247 TCGA-BH-A28O-01 0 1120 0 1120 0 1120 0 1120 #> 1248 TCGA-BH-A28Q-01 0 1119 0 1119 NA NA 0 1119 #> 1249 TCGA-BH-A2L8-01 0 612 0 612 0 612 0 612 #> 1250 TCGA-BH-A42T-01 1 320 0 320 0 320 0 320 #> 1251 TCGA-BH-A42U-01 0 3364 0 3364 0 3364 0 3364 #> 1252 TCGA-BH-A42V-01 0 635 0 635 0 635 0 635 #> 1253 TCGA-BH-A5IZ-01 0 567 0 567 0 567 0 567 #> 1254 TCGA-BH-A5J0-01 0 715 0 715 0 715 0 715 #> 1255 TCGA-BH-A6R8-01 0 293 0 293 0 293 0 293 #> 1256 TCGA-BH-A6R9-01 0 160 0 160 0 160 0 160 #> 1257 TCGA-BH-A8FY-01 1 295 0 295 0 295 0 295 #> 1258 TCGA-BH-A8FZ-01 0 574 0 574 0 574 0 574 #> 1259 TCGA-BH-A8G0-01 0 662 0 662 0 662 0 662 #> 1260 TCGA-BH-AB28-01 0 287 0 287 0 287 0 287 #> 1261 TCGA-C8-A12K-01 0 0 0 0 0 0 0 0 #> 1262 TCGA-C8-A12L-01 0 363 0 363 0 363 0 363 #> 1263 TCGA-C8-A12M-01 0 358 0 358 0 358 0 358 #> 1264 TCGA-C8-A12N-01 0 358 0 358 0 358 0 358 #> 1265 TCGA-C8-A12O-01 0 385 0 385 0 385 0 385 #> 1266 TCGA-C8-A12P-01 0 358 0 358 0 358 0 358 #> 1267 TCGA-C8-A12Q-01 1 385 1 385 NA NA 1 385 #> 1268 TCGA-C8-A12T-01 0 0 0 0 0 0 0 0 #> 1269 TCGA-C8-A12U-01 0 385 0 385 0 385 0 385 #> 1270 TCGA-C8-A12V-01 0 385 0 385 NA NA 0 385 #> 1271 TCGA-C8-A12W-01 0 385 0 385 0 385 0 385 #> 1272 TCGA-C8-A12X-01 0 385 0 385 0 385 0 385 #> 1273 TCGA-C8-A12Y-01 0 1476 0 1476 0 1476 0 1476 #> 1274 TCGA-C8-A12Z-01 0 382 0 382 0 382 0 382 #> 1275 TCGA-C8-A130-01 0 370 0 370 0 370 0 370 #> 1276 TCGA-C8-A131-01 0 411 0 411 0 411 0 411 #> 1277 TCGA-C8-A132-01 0 383 0 383 0 383 0 383 #> 1278 TCGA-C8-A133-01 0 0 0 0 0 0 0 0 #> 1279 TCGA-C8-A134-01 0 383 0 383 0 383 0 383 #> 1280 TCGA-C8-A135-01 0 393 0 393 0 393 0 393 #> 1281 TCGA-C8-A137-01 0 379 0 379 1 136 1 136 #> 1282 TCGA-C8-A138-01 0 380 0 380 0 380 0 380 #> 1283 TCGA-C8-A1HE-01 0 375 0 375 0 375 0 375 #> 1284 TCGA-C8-A1HG-01 0 345 0 345 0 345 0 345 #> 1285 TCGA-C8-A1HI-01 0 343 0 343 0 343 0 343 #> 1286 TCGA-C8-A1HJ-01 0 5 0 5 0 5 0 5 #> 1287 TCGA-C8-A1HK-01 0 366 0 366 0 366 0 366 #> 1288 TCGA-C8-A1HL-01 0 317 0 317 0 317 0 317 #> 1289 TCGA-C8-A1HM-01 0 375 0 375 0 375 0 375 #> 1290 TCGA-C8-A1HN-01 0 394 0 394 0 394 0 394 #> 1291 TCGA-C8-A1HO-01 0 375 0 375 0 375 0 375 #> 1292 TCGA-C8-A26V-01 0 616 0 616 0 616 0 616 #> 1293 TCGA-C8-A26W-01 0 381 0 381 0 381 0 381 #> 1294 TCGA-C8-A26X-01 0 376 0 376 0 376 0 376 #> 1295 TCGA-C8-A26Y-01 0 394 0 394 0 394 0 394 #> 1296 TCGA-C8-A26Z-01 0 470 0 470 0 470 0 470 #> 1297 TCGA-C8-A273-01 0 513 0 513 0 513 0 513 #> 1298 TCGA-C8-A274-01 0 508 0 508 0 508 0 508 #> 1299 TCGA-C8-A275-01 0 1 0 1 0 1 0 1 #> 1300 TCGA-C8-A278-01 0 297 0 297 0 297 0 297 #> 1301 TCGA-C8-A27A-01 0 747 0 747 0 747 0 747 #> 1302 TCGA-C8-A27B-01 0 439 0 439 0 439 0 439 #> 1303 TCGA-C8-A3M7-01 1 1034 1 1034 1 1034 1 1034 #> 1304 TCGA-C8-A3M8-01 0 394 0 394 0 394 0 394 #> 1305 TCGA-C8-A8HP-01 0 396 0 396 0 396 0 396 #> 1306 TCGA-C8-A8HQ-01 0 380 0 380 0 380 0 380 #> 1307 TCGA-C8-A8HR-01 0 408 0 408 0 408 0 408 #> 1308 TCGA-D8-A13Y-01 0 1728 0 1728 0 1728 0 1728 #> 1309 TCGA-D8-A13Z-01 0 635 0 635 0 635 0 635 #> 1310 TCGA-D8-A140-01 0 403 0 403 0 403 0 403 #> 1311 TCGA-D8-A141-01 0 626 0 626 0 626 0 626 #> 1312 TCGA-D8-A142-01 0 425 0 425 0 425 0 425 #> 1313 TCGA-D8-A143-01 0 431 0 431 0 431 0 431 #> 1314 TCGA-D8-A145-01 0 410 0 410 0 410 0 410 #> 1315 TCGA-D8-A146-01 0 643 0 643 0 643 0 643 #> 1316 TCGA-D8-A147-01 0 584 0 584 0 584 0 584 #> 1317 TCGA-D8-A1J8-01 0 431 0 431 0 431 0 431 #> 1318 TCGA-D8-A1J9-01 0 532 0 532 0 532 0 532 #> 1319 TCGA-D8-A1JA-01 0 502 0 502 1 431 1 431 #> 1320 TCGA-D8-A1JB-01 0 1688 0 1688 0 1688 0 1688 #> 1321 TCGA-D8-A1JC-01 0 480 0 480 0 480 0 480 #> 1322 TCGA-D8-A1JD-01 0 552 0 552 0 552 0 552 #> 1323 TCGA-D8-A1JE-01 0 575 0 575 0 575 0 575 #> 1324 TCGA-D8-A1JF-01 0 366 0 366 0 366 0 366 #> 1325 TCGA-D8-A1JG-01 0 1612 0 1612 0 1612 0 1612 #> 1326 TCGA-D8-A1JH-01 0 426 0 426 0 426 0 426 #> 1327 TCGA-D8-A1JI-01 0 577 0 577 0 577 0 577 #> 1328 TCGA-D8-A1JJ-01 0 611 0 611 0 611 0 611 #> 1329 TCGA-D8-A1JK-01 0 612 0 612 0 612 0 612 #> 1330 TCGA-D8-A1JL-01 0 611 0 611 0 611 0 611 #> 1331 TCGA-D8-A1JM-01 0 590 0 590 0 590 0 590 #> 1332 TCGA-D8-A1JN-01 0 620 0 620 0 620 0 620 #> 1333 TCGA-D8-A1JP-01 0 639 0 639 0 639 0 639 #> 1334 TCGA-D8-A1JS-01 0 371 0 371 0 371 0 371 #> 1335 TCGA-D8-A1JT-01 0 405 0 405 0 405 0 405 #> 1336 TCGA-D8-A1JU-01 0 447 0 447 0 447 0 447 #> 1337 TCGA-D8-A1X5-01 0 565 0 565 0 565 0 565 #> 1338 TCGA-D8-A1X6-01 0 541 0 541 0 541 0 541 #> 1339 TCGA-D8-A1X7-01 0 509 0 509 0 509 0 509 #> 1340 TCGA-D8-A1X8-01 0 783 0 783 0 783 0 783 #> 1341 TCGA-D8-A1X9-01 0 727 0 727 NA NA 0 727 #> 1342 TCGA-D8-A1XA-01 0 839 0 839 0 839 0 839 #> 1343 TCGA-D8-A1XB-01 0 552 0 552 0 552 0 552 #> 1344 TCGA-D8-A1XC-01 1 377 1 377 NA NA 1 377 #> 1345 TCGA-D8-A1XD-01 0 522 0 522 0 522 0 522 #> 1346 TCGA-D8-A1XF-01 0 463 0 463 NA NA 0 463 #> 1347 TCGA-D8-A1XG-01 0 448 0 448 0 448 0 448 #> 1348 TCGA-D8-A1XJ-01 0 664 0 664 0 664 0 664 #> 1349 TCGA-D8-A1XK-01 0 441 0 441 0 441 0 441 #> 1350 TCGA-D8-A1XL-01 0 606 0 606 0 606 0 606 #> 1351 TCGA-D8-A1XM-01 0 538 0 538 0 538 0 538 #> 1352 TCGA-D8-A1XO-01 0 1682 0 1682 0 1682 0 1682 #> 1353 TCGA-D8-A1XQ-01 0 499 0 499 0 499 0 499 #> 1354 TCGA-D8-A1XR-01 0 482 0 482 0 482 0 482 #> 1355 TCGA-D8-A1XS-01 0 496 0 496 0 496 0 496 #> 1356 TCGA-D8-A1XT-01 0 506 0 506 0 506 0 506 #> 1357 TCGA-D8-A1XU-01 0 395 0 395 0 395 0 395 #> 1358 TCGA-D8-A1XV-01 0 461 0 461 0 461 0 461 #> 1359 TCGA-D8-A1XW-01 0 1309 0 1309 0 1309 0 1309 #> 1360 TCGA-D8-A1XY-01 0 503 0 503 NA NA 0 503 #> 1361 TCGA-D8-A1XZ-01 0 466 0 466 0 466 0 466 #> 1362 TCGA-D8-A1Y0-01 0 472 0 472 NA NA 0 472 #> 1363 TCGA-D8-A1Y1-01 1 302 1 302 NA NA 1 302 #> 1364 TCGA-D8-A1Y2-01 0 433 0 433 0 433 0 433 #> 1365 TCGA-D8-A1Y3-01 0 430 0 430 0 430 0 430 #> 1366 TCGA-D8-A27E-01 0 530 0 530 0 530 0 530 #> 1367 TCGA-D8-A27F-01 0 488 0 488 0 488 0 488 #> 1368 TCGA-D8-A27G-01 0 409 0 409 0 409 0 409 #> 1369 TCGA-D8-A27H-01 0 397 0 397 0 397 0 397 #> 1370 TCGA-D8-A27I-01 0 439 0 439 0 439 0 439 #> 1371 TCGA-D8-A27K-01 0 1461 0 1461 0 1461 0 1461 #> 1372 TCGA-D8-A27L-01 0 499 0 499 0 499 0 499 #> 1373 TCGA-D8-A27M-01 0 410 0 410 0 410 0 410 #> 1374 TCGA-D8-A27N-01 0 519 0 519 0 519 0 519 #> 1375 TCGA-D8-A27P-01 0 49 0 49 0 49 0 49 #> 1376 TCGA-D8-A27R-01 0 307 0 307 0 307 0 307 #> 1377 TCGA-D8-A27T-01 0 398 0 398 0 398 0 398 #> 1378 TCGA-D8-A27V-01 0 381 0 381 0 381 0 381 #> 1379 TCGA-D8-A27W-01 0 373 0 373 0 373 0 373 #> 1380 TCGA-D8-A3Z5-01 0 1015 0 1015 0 1015 0 1015 #> 1381 TCGA-D8-A3Z6-01 0 563 0 563 0 563 0 563 #> 1382 TCGA-D8-A4Z1-01 0 659 0 659 0 659 0 659 #> 1383 TCGA-D8-A73U-01 0 492 0 492 0 492 0 492 #> 1384 TCGA-D8-A73W-01 1 385 1 385 1 21 1 21 #> 1385 TCGA-D8-A73X-01 0 767 0 767 0 767 0 767 #> 1386 TCGA-E2-A105-01 0 1308 0 1308 0 1308 0 1308 #> 1387 TCGA-E2-A106-01 0 2541 0 2541 0 2541 0 2541 #> 1388 TCGA-E2-A107-01 0 1047 0 1047 0 1047 0 1047 #> 1389 TCGA-E2-A109-01 0 1417 0 1417 0 1417 0 1417 #> 1390 TCGA-E2-A10A-01 0 1229 0 1229 1 75 1 75 #> 1391 TCGA-E2-A10B-01 0 1141 0 1141 NA NA 1 195 #> 1392 TCGA-E2-A10C-01 0 1220 0 1220 0 1220 0 1220 #> 1393 TCGA-E2-A10E-01 0 865 0 865 0 865 0 865 #> 1394 TCGA-E2-A10F-01 0 878 0 878 0 878 0 878 #> 1395 TCGA-E2-A14N-01 0 1434 0 1434 0 1434 0 1434 #> 1396 TCGA-E2-A14O-01 0 1359 0 1359 0 1359 0 1359 #> 1397 TCGA-E2-A14P-01 0 1246 0 1246 0 1246 0 1246 #> 1398 TCGA-E2-A14Q-01 0 1163 0 1163 0 1163 0 1163 #> 1399 TCGA-E2-A14R-01 0 1174 0 1174 0 1174 1 971 #> 1400 TCGA-E2-A14S-01 0 1009 0 1009 0 1009 0 1009 #> 1401 TCGA-E2-A14T-01 0 2311 0 2311 0 2311 0 2311 #> 1402 TCGA-E2-A14U-01 0 1318 0 1318 0 1318 0 1318 #> 1403 TCGA-E2-A14V-01 0 1042 0 1042 0 1042 0 1042 #> 1404 TCGA-E2-A14W-01 0 974 0 974 0 974 0 974 #> 1405 TCGA-E2-A14X-01 0 972 0 972 0 972 0 972 #> 1406 TCGA-E2-A14Y-01 0 2109 0 2109 0 2109 0 2109 #> 1407 TCGA-E2-A14Z-01 1 563 1 563 1 188 1 188 #> 1408 TCGA-E2-A150-01 0 1935 0 1935 0 1935 0 1935 #> 1409 TCGA-E2-A152-01 0 2128 0 2128 1 54 1 54 #> 1410 TCGA-E2-A153-01 0 707 0 707 0 707 0 707 #> 1411 TCGA-E2-A153-11 0 707 0 707 0 707 0 707 #> 1412 TCGA-E2-A154-01 0 591 0 591 0 591 0 591 #> 1413 TCGA-E2-A155-01 0 640 0 640 0 640 0 640 #> 1414 TCGA-E2-A156-01 0 726 0 726 0 726 0 726 #> 1415 TCGA-E2-A158-01 0 450 0 450 0 450 0 450 #> 1416 TCGA-E2-A158-11 0 450 0 450 0 450 0 450 #> 1417 TCGA-E2-A159-01 0 762 0 762 0 762 0 762 #> 1418 TCGA-E2-A15A-06 0 710 0 710 0 710 0 710 #> 1419 TCGA-E2-A15A-01 0 710 0 710 0 710 0 710 #> 1420 TCGA-E2-A15C-01 0 694 0 694 0 694 0 694 #> 1421 TCGA-E2-A15D-01 0 526 0 526 0 526 0 526 #> 1422 TCGA-E2-A15E-06 0 630 0 630 0 630 0 630 #> 1423 TCGA-E2-A15E-01 0 630 0 630 0 630 0 630 #> 1424 TCGA-E2-A15F-01 0 658 0 658 0 658 0 658 #> 1425 TCGA-E2-A15G-01 0 554 0 554 0 554 0 554 #> 1426 TCGA-E2-A15H-01 0 393 0 393 0 393 0 393 #> 1427 TCGA-E2-A15I-01 0 1692 0 1692 0 1692 0 1692 #> 1428 TCGA-E2-A15I-11 0 1692 0 1692 0 1692 0 1692 #> 1429 TCGA-E2-A15J-01 0 1640 0 1640 0 1640 0 1640 #> 1430 TCGA-E2-A15K-06 0 275 0 275 0 275 0 275 #> 1431 TCGA-E2-A15K-01 0 275 0 275 0 275 0 275 #> 1432 TCGA-E2-A15K-11 0 275 0 275 0 275 0 275 #> 1433 TCGA-E2-A15L-01 0 626 0 626 0 626 0 626 #> 1434 TCGA-E2-A15M-01 1 336 0 336 0 336 0 336 #> 1435 TCGA-E2-A15M-11 1 336 0 336 0 336 0 336 #> 1436 TCGA-E2-A15O-01 0 1545 0 1545 1 1210 1 1210 #> 1437 TCGA-E2-A15P-01 0 595 0 595 0 595 0 595 #> 1438 TCGA-E2-A15R-01 0 1732 0 1732 0 1732 0 1732 #> 1439 TCGA-E2-A15S-01 0 428 0 428 0 428 0 428 #> 1440 TCGA-E2-A15T-01 0 1563 0 1563 0 1563 0 1563 #> 1441 TCGA-E2-A1AZ-01 0 2329 0 2329 0 2329 0 2329 #> 1442 TCGA-E2-A1B0-01 0 1631 0 1631 0 1631 0 1631 #> 1443 TCGA-E2-A1B1-01 0 2653 0 2653 0 2653 0 2653 #> 1444 TCGA-E2-A1B4-01 1 1004 0 1004 0 1004 0 1004 #> 1445 TCGA-E2-A1B5-01 0 984 0 984 0 984 0 984 #> 1446 TCGA-E2-A1B6-01 0 867 0 867 0 867 0 867 #> 1447 TCGA-E2-A1BC-01 0 501 0 501 NA NA 0 501 #> 1448 TCGA-E2-A1BC-11 0 501 0 501 NA NA 0 501 #> 1449 TCGA-E2-A1BD-01 0 1133 0 1133 0 1133 0 1133 #> 1450 TCGA-E2-A1IE-01 0 2362 0 2362 1 1810 1 1810 #> 1451 TCGA-E2-A1IF-01 0 1138 0 1138 0 1138 0 1138 #> 1452 TCGA-E2-A1IG-01 0 2140 0 2140 0 2140 0 2140 #> 1453 TCGA-E2-A1IG-11 0 2140 0 2140 0 2140 0 2140 #> 1454 TCGA-E2-A1IH-01 0 1026 0 1026 0 1026 0 1026 #> 1455 TCGA-E2-A1II-01 0 1025 0 1025 0 1025 0 1025 #> 1456 TCGA-E2-A1IJ-01 0 865 0 865 0 865 0 865 #> 1457 TCGA-E2-A1IK-01 0 1800 0 1800 0 1800 0 1800 #> 1458 TCGA-E2-A1IL-01 0 118 0 118 0 118 0 118 #> 1459 TCGA-E2-A1IN-01 0 675 0 675 0 675 0 675 #> 1460 TCGA-E2-A1IO-01 0 1855 0 1855 0 1855 0 1855 #> 1461 TCGA-E2-A1IU-01 0 337 0 337 0 337 0 337 #> 1462 TCGA-E2-A1L6-01 0 1648 0 1648 0 1648 0 1648 #> 1463 TCGA-E2-A1L7-01 0 1836 0 1836 1 1619 1 1619 #> 1464 TCGA-E2-A1L7-11 0 1836 0 1836 1 1619 1 1619 #> 1465 TCGA-E2-A1L8-01 0 2240 0 2240 0 2240 0 2240 #> 1466 TCGA-E2-A1L9-01 0 598 0 598 0 598 0 598 #> 1467 TCGA-E2-A1LA-01 0 748 0 748 0 748 0 748 #> 1468 TCGA-E2-A1LB-01 0 2306 0 2306 0 2306 0 2306 #> 1469 TCGA-E2-A1LB-11 0 2306 0 2306 0 2306 0 2306 #> 1470 TCGA-E2-A1LE-01 1 879 1 879 1 361 1 361 #> 1471 TCGA-E2-A1LG-01 0 1523 0 1523 0 1523 0 1523 #> 1472 TCGA-E2-A1LH-01 0 3247 0 3247 0 3247 0 3247 #> 1473 TCGA-E2-A1LH-11 0 3247 0 3247 0 3247 0 3247 #> 1474 TCGA-E2-A1LI-01 0 3121 0 3121 NA NA 0 3121 #> 1475 TCGA-E2-A1LK-01 1 266 1 266 1 155 1 155 #> 1476 TCGA-E2-A1LL-01 0 1309 0 1309 1 1303 1 1303 #> 1477 TCGA-E2-A1LS-01 0 1604 0 1604 0 1604 0 1604 #> 1478 TCGA-E2-A1LS-11 0 1604 0 1604 0 1604 0 1604 #> 1479 TCGA-E2-A2P5-01 1 821 1 821 1 597 1 597 #> 1480 TCGA-E2-A2P6-01 0 1051 0 1051 0 1051 0 1051 #> 1481 TCGA-E2-A3DX-01 0 1325 0 1325 NA NA 0 1325 #> 1482 TCGA-E2-A56Z-01 0 252 0 252 0 252 0 252 #> 1483 TCGA-E2-A570-01 0 931 0 931 0 931 0 931 #> 1484 TCGA-E2-A572-01 0 1208 0 1208 0 1208 0 1208 #> 1485 TCGA-E2-A573-01 0 1062 0 1062 0 1062 0 1062 #> 1486 TCGA-E2-A574-01 0 1179 0 1179 0 1179 0 1179 #> 1487 TCGA-E2-A576-01 0 1043 0 1043 0 1043 0 1043 #> 1488 TCGA-E2-A9RU-01 0 538 0 538 0 538 0 538 #> 1489 TCGA-E9-A1N3-01 0 1059 0 1059 0 1059 0 1059 #> 1490 TCGA-E9-A1N4-01 0 1000 0 1000 0 1000 0 1000 #> 1491 TCGA-E9-A1N4-11 0 1000 0 1000 0 1000 0 1000 #> 1492 TCGA-E9-A1N5-01 0 1120 0 1120 0 1120 0 1120 #> 1493 TCGA-E9-A1N5-11 0 1120 0 1120 0 1120 0 1120 #> 1494 TCGA-E9-A1N6-01 1 678 1 678 1 443 1 443 #> 1495 TCGA-E9-A1N6-11 1 678 1 678 1 443 1 443 #> 1496 TCGA-E9-A1N8-01 0 1039 0 1039 0 1039 0 1039 #> 1497 TCGA-E9-A1N9-01 0 1101 0 1101 0 1101 0 1101 #> 1498 TCGA-E9-A1N9-11 0 1101 0 1101 0 1101 0 1101 #> 1499 TCGA-E9-A1NA-01 0 1112 0 1112 0 1112 0 1112 #> 1500 TCGA-E9-A1NA-11 0 1112 0 1112 0 1112 0 1112 #> 1501 TCGA-E9-A1NC-01 0 1203 0 1203 0 1203 0 1203 #> 1502 TCGA-E9-A1ND-01 0 1266 0 1266 0 1266 0 1266 #> 1503 TCGA-E9-A1ND-11 0 1266 0 1266 0 1266 0 1266 #> 1504 TCGA-E9-A1NE-01 0 1088 0 1088 0 1088 0 1088 #> 1505 TCGA-E9-A1NF-01 1 1072 1 1072 1 90 1 90 #> 1506 TCGA-E9-A1NF-11 1 1072 1 1072 1 90 1 90 #> 1507 TCGA-E9-A1NG-01 1 786 0 786 0 786 0 786 #> 1508 TCGA-E9-A1NG-11 1 786 0 786 0 786 0 786 #> 1509 TCGA-E9-A1NH-01 0 576 0 576 0 576 0 576 #> 1510 TCGA-E9-A1NI-01 0 300 0 300 0 300 0 300 #> 1511 TCGA-E9-A1QZ-01 0 755 0 755 0 755 0 755 #> 1512 TCGA-E9-A1R0-01 0 860 0 860 NA NA 0 860 #> 1513 TCGA-E9-A1R2-01 0 1063 0 1063 NA NA 0 1063 #> 1514 TCGA-E9-A1R3-01 0 78 0 78 0 78 0 78 #> 1515 TCGA-E9-A1R4-01 0 186 0 186 0 186 0 186 #> 1516 TCGA-E9-A1R5-01 0 92 0 92 0 92 0 92 #> 1517 TCGA-E9-A1R6-01 0 339 0 339 0 339 0 339 #> 1518 TCGA-E9-A1R7-01 0 1467 0 1467 0 1467 0 1467 #> 1519 TCGA-E9-A1R7-11 0 1467 0 1467 0 1467 0 1467 #> 1520 TCGA-E9-A1RA-01 0 1369 0 1369 0 1369 0 1369 #> 1521 TCGA-E9-A1RB-01 1 976 0 976 0 976 0 976 #> 1522 TCGA-E9-A1RB-11 1 976 0 976 0 976 0 976 #> 1523 TCGA-E9-A1RC-01 0 1224 0 1224 0 1224 0 1224 #> 1524 TCGA-E9-A1RC-11 0 1224 0 1224 0 1224 0 1224 #> 1525 TCGA-E9-A1RD-01 0 34 0 34 0 34 0 34 #> 1526 TCGA-E9-A1RD-11 0 34 0 34 0 34 0 34 #> 1527 TCGA-E9-A1RE-01 0 1419 0 1419 0 1419 0 1419 #> 1528 TCGA-E9-A1RF-01 0 200 0 200 0 200 0 200 #> 1529 TCGA-E9-A1RF-11 0 200 0 200 0 200 0 200 #> 1530 TCGA-E9-A1RG-01 0 647 0 647 0 647 0 647 #> 1531 TCGA-E9-A1RH-01 0 1417 0 1417 0 1417 0 1417 #> 1532 TCGA-E9-A1RH-11 0 1417 0 1417 0 1417 0 1417 #> 1533 TCGA-E9-A1RI-01 0 1449 0 1449 0 1449 0 1449 #> 1534 TCGA-E9-A1RI-11 0 1449 0 1449 0 1449 0 1449 #> 1535 TCGA-E9-A226-01 1 1048 1 1048 1 790 1 790 #> 1536 TCGA-E9-A227-01 0 975 0 975 0 975 0 975 #> 1537 TCGA-E9-A228-01 0 1285 0 1285 0 1285 0 1285 #> 1538 TCGA-E9-A229-01 0 1148 0 1148 0 1148 0 1148 #> 1539 TCGA-E9-A22A-01 0 1189 0 1189 0 1189 0 1189 #> 1540 TCGA-E9-A22B-01 0 1167 0 1167 0 1167 0 1167 #> 1541 TCGA-E9-A22D-01 0 1248 0 1248 0 1248 0 1248 #> 1542 TCGA-E9-A22E-01 0 1269 0 1269 0 1269 0 1269 #> 1543 TCGA-E9-A22G-01 0 1239 0 1239 0 1239 0 1239 #> 1544 TCGA-E9-A22H-01 0 1232 0 1232 0 1232 0 1232 #> 1545 TCGA-E9-A243-01 0 612 0 612 1 305 1 305 #> 1546 TCGA-E9-A244-01 0 21 0 21 0 21 0 21 #> 1547 TCGA-E9-A245-01 0 26 0 26 0 26 0 26 #> 1548 TCGA-E9-A247-01 0 1186 0 1186 0 1186 0 1186 #> 1549 TCGA-E9-A248-01 0 59 0 59 0 59 0 59 #> 1550 TCGA-E9-A249-01 0 217 0 217 0 217 0 217 #> 1551 TCGA-E9-A24A-01 0 747 0 747 0 747 0 747 #> 1552 TCGA-E9-A295-01 0 375 0 375 0 375 0 375 #> 1553 TCGA-E9-A2JS-01 1 904 1 904 1 524 1 524 #> 1554 TCGA-E9-A2JT-01 0 288 0 288 0 288 0 288 #> 1555 TCGA-E9-A3HO-01 0 1158 0 1158 0 1158 0 1158 #> 1556 TCGA-E9-A3Q9-01 0 1001 0 1001 0 1001 0 1001 #> 1557 TCGA-E9-A3QA-01 0 918 0 918 0 918 0 918 #> 1558 TCGA-E9-A3X8-01 0 926 0 926 0 926 0 926 #> 1559 TCGA-E9-A54X-01 0 727 0 727 0 727 0 727 #> 1560 TCGA-E9-A54Y-01 0 725 0 725 0 725 0 725 #> 1561 TCGA-E9-A5FK-01 0 812 0 812 0 812 0 812 #> 1562 TCGA-E9-A5FL-01 0 24 0 24 0 24 0 24 #> 1563 TCGA-E9-A5UO-01 0 785 0 785 0 785 0 785 #> 1564 TCGA-E9-A5UP-01 0 803 0 803 0 803 0 803 #> 1565 TCGA-E9-A6HE-01 0 847 0 847 0 847 0 847 #> 1566 TCGA-EW-A1IW-01 0 371 0 371 0 371 0 371 #> 1567 TCGA-EW-A1IX-01 0 1208 0 1208 0 1208 0 1208 #> 1568 TCGA-EW-A1IY-01 0 258 0 258 0 258 0 258 #> 1569 TCGA-EW-A1IZ-01 0 554 0 554 0 554 0 554 #> 1570 TCGA-EW-A1J1-01 0 575 0 575 0 575 0 575 #> 1571 TCGA-EW-A1J2-01 0 403 0 403 0 403 0 403 #> 1572 TCGA-EW-A1J3-01 0 504 0 504 0 504 0 504 #> 1573 TCGA-EW-A1J5-01 0 477 0 477 0 477 0 477 #> 1574 TCGA-EW-A1J6-01 0 875 0 875 0 875 0 875 #> 1575 TCGA-EW-A1OV-01 0 789 0 789 0 789 0 789 #> 1576 TCGA-EW-A1OW-01 0 694 0 694 0 694 0 694 #> 1577 TCGA-EW-A1OX-01 0 911 0 911 0 911 0 911 #> 1578 TCGA-EW-A1OY-01 0 908 0 908 0 908 0 908 #> 1579 TCGA-EW-A1OZ-01 0 1229 0 1229 0 1229 0 1229 #> 1580 TCGA-EW-A1P0-01 0 1251 0 1251 1 1094 1 1094 #> 1581 TCGA-EW-A1P1-01 0 1210 0 1210 1 1014 1 1014 #> 1582 TCGA-EW-A1P3-01 0 1611 0 1611 0 1611 0 1611 #> 1583 TCGA-EW-A1P4-01 0 907 0 907 0 907 0 907 #> 1584 TCGA-EW-A1P5-01 0 703 0 703 0 703 0 703 #> 1585 TCGA-EW-A1P6-01 0 562 0 562 NA NA 0 562 #> 1586 TCGA-EW-A1P7-01 0 915 0 915 1 729 1 729 #> 1587 TCGA-EW-A1P8-01 1 239 1 239 1 207 1 207 #> 1588 TCGA-EW-A1PA-01 0 575 0 575 0 575 0 575 #> 1589 TCGA-EW-A1PB-01 0 608 0 608 0 608 0 608 #> 1590 TCGA-EW-A1PC-01 0 187 0 187 0 187 0 187 #> 1591 TCGA-EW-A1PD-01 0 424 0 424 0 424 0 424 #> 1592 TCGA-EW-A1PE-01 0 320 0 320 0 320 0 320 #> 1593 TCGA-EW-A1PF-01 0 439 0 439 0 439 0 439 #> 1594 TCGA-EW-A1PG-01 0 1051 0 1051 0 1051 0 1051 #> 1595 TCGA-EW-A1PH-01 0 607 0 607 0 607 0 607 #> 1596 TCGA-EW-A2FR-01 0 1673 0 1673 0 1673 0 1673 #> 1597 TCGA-EW-A2FS-01 0 1604 0 1604 0 1604 0 1604 #> 1598 TCGA-EW-A2FV-01 0 788 0 788 0 788 0 788 #> 1599 TCGA-EW-A2FW-01 0 672 0 672 0 672 0 672 #> 1600 TCGA-EW-A3E8-01 0 1035 0 1035 0 1035 0 1035 #> 1601 TCGA-EW-A3U0-01 0 532 0 532 0 532 0 532 #> 1602 TCGA-EW-A423-01 0 533 0 533 0 533 0 533 #> 1603 TCGA-EW-A424-01 0 715 0 715 0 715 0 715 #> 1604 TCGA-EW-A6S9-01 0 463 0 463 NA NA 0 463 #> 1605 TCGA-EW-A6SA-01 0 510 0 510 0 510 0 510 #> 1606 TCGA-EW-A6SB-01 0 760 0 760 0 760 0 760 #> 1607 TCGA-EW-A6SC-01 0 952 0 952 0 952 0 952 #> 1608 TCGA-EW-A6SD-01 0 1010 0 1010 0 1010 0 1010 #> 1609 TCGA-GI-A2C8-01 0 225 0 225 0 225 0 225 #> 1610 TCGA-GI-A2C8-11 0 225 0 225 0 225 0 225 #> 1611 TCGA-GI-A2C9-01 0 3342 0 3342 0 3342 0 3342 #> 1612 TCGA-GI-A2C9-11 0 3342 0 3342 0 3342 0 3342 #> 1613 TCGA-GM-A2D9-01 1 1812 1 1812 1 536 1 536 #> 1614 TCGA-GM-A2DA-01 1 6593 1 6593 1 3014 1 3014 #> 1615 TCGA-GM-A2DB-01 0 2406 0 2406 0 2406 0 2406 #> 1616 TCGA-GM-A2DC-01 0 2535 0 2535 0 2535 0 2535 #> 1617 TCGA-GM-A2DD-01 0 2282 0 2282 0 2282 0 2282 #> 1618 TCGA-GM-A2DF-01 0 2155 0 2155 0 2155 0 2155 #> 1619 TCGA-GM-A2DH-01 0 2193 0 2193 0 2193 0 2193 #> 1620 TCGA-GM-A2DI-01 0 2590 0 2590 0 2590 0 2590 #> 1621 TCGA-GM-A2DK-01 0 2645 0 2645 0 2645 0 2645 #> 1622 TCGA-GM-A2DL-01 0 3519 0 3519 0 3519 0 3519 #> 1623 TCGA-GM-A2DM-01 0 3226 0 3226 0 3226 0 3226 #> 1624 TCGA-GM-A2DN-01 0 3091 0 3091 0 3091 0 3091 #> 1625 TCGA-GM-A2DO-01 0 2596 0 2596 0 2596 0 2596 #> 1626 TCGA-GM-A3NW-01 0 3361 0 3361 0 3361 0 3361 #> 1627 TCGA-GM-A3NY-01 0 1162 0 1162 0 1162 0 1162 #> 1628 TCGA-GM-A3XG-01 0 1330 0 1330 0 1330 0 1330 #> 1629 TCGA-GM-A3XL-01 0 2108 0 2108 0 2108 0 2108 #> 1630 TCGA-GM-A3XN-01 0 2019 0 2019 0 2019 0 2019 #> 1631 TCGA-GM-A4E0-01 0 2191 0 2191 0 2191 0 2191 #> 1632 TCGA-GM-A5PV-01 0 412 0 412 0 412 0 412 #> 1633 TCGA-GM-A5PX-01 0 551 0 551 0 551 0 551 #> 1634 TCGA-HN-A2NL-01 0 79 0 79 0 79 0 79 #> 1635 TCGA-HN-A2OB-01 1 1900 1 1900 1 1543 1 1543 #> 1636 TCGA-JL-A3YW-01 0 360 0 360 0 360 0 360 #> 1637 TCGA-JL-A3YX-01 0 352 0 352 0 352 0 352 #> 1638 TCGA-LD-A66U-01 0 646 0 646 0 646 0 646 #> 1639 TCGA-LD-A74U-01 0 402 0 402 0 402 0 402 #> 1640 TCGA-LD-A7W5-01 0 216 0 216 NA NA 0 216 #> 1641 TCGA-LD-A7W6-01 0 404 0 404 0 404 0 404 #> 1642 TCGA-LD-A9QF-01 0 323 0 323 0 323 0 323 #> 1643 TCGA-LL-A440-01 0 759 0 759 0 759 0 759 #> 1644 TCGA-LL-A441-01 0 996 0 996 0 996 0 996 #> 1645 TCGA-LL-A442-01 0 889 0 889 0 889 0 889 #> 1646 TCGA-LL-A50Y-01 0 762 0 762 0 762 0 762 #> 1647 TCGA-LL-A5YL-01 0 519 0 519 0 519 0 519 #> 1648 TCGA-LL-A5YM-01 0 466 0 466 1 258 1 258 #> 1649 TCGA-LL-A5YN-01 0 447 0 447 0 447 0 447 #> 1650 TCGA-LL-A5YO-01 0 440 0 440 0 440 0 440 #> 1651 TCGA-LL-A5YP-01 0 450 0 450 0 450 0 450 #> 1652 TCGA-LL-A6FP-01 0 677 0 677 0 677 0 677 #> 1653 TCGA-LL-A6FQ-01 0 80 0 80 0 80 0 80 #> 1654 TCGA-LL-A6FR-01 0 489 0 489 0 489 0 489 #> 1655 TCGA-LL-A73Y-01 0 477 0 477 0 477 0 477 #> 1656 TCGA-LL-A73Z-01 1 227 1 227 NA NA 1 192 #> 1657 TCGA-LL-A740-01 0 441 0 441 0 441 0 441 #> 1658 TCGA-LL-A7SZ-01 0 594 0 594 0 594 0 594 #> 1659 TCGA-LL-A7T0-01 0 376 0 376 0 376 0 376 #> 1660 TCGA-LL-A8F5-01 0 596 0 596 0 596 0 596 #> 1661 TCGA-LL-A9Q3-01 0 532 0 532 0 532 0 532 #> 1662 TCGA-LQ-A4E4-01 0 849 0 849 NA NA 1 681 #> 1663 TCGA-MS-A51U-01 0 681 0 681 0 681 0 681 #> 1664 TCGA-OK-A5Q2-01 0 64 0 64 0 64 0 64 #> 1665 TCGA-OL-A5D6-01 1 1104 0 1104 0 1104 0 1104 #> 1666 TCGA-OL-A5D7-01 0 1780 0 1780 0 1780 0 1780 #> 1667 TCGA-OL-A5D8-01 0 973 0 973 NA NA 0 973 #> 1668 TCGA-OL-A5DA-01 0 1783 0 1783 0 1783 0 1783 #> 1669 TCGA-OL-A5RU-01 0 1219 0 1219 0 1219 0 1219 #> 1670 TCGA-OL-A5RV-01 0 1062 0 1062 0 1062 0 1062 #> 1671 TCGA-OL-A5RW-01 0 1106 0 1106 0 1106 0 1106 #> 1672 TCGA-OL-A5RX-01 0 878 0 878 0 878 0 878 #> 1673 TCGA-OL-A5RY-01 0 752 0 752 0 752 0 752 #> 1674 TCGA-OL-A5RZ-01 0 679 0 679 0 679 0 679 #> 1675 TCGA-OL-A5S0-01 0 620 0 620 0 620 0 620 #> 1676 TCGA-OL-A66H-01 0 NA 0 NA 0 NA 0 NA #> 1677 TCGA-OL-A66I-01 0 714 0 714 0 714 0 714 #> 1678 TCGA-OL-A66J-01 0 1996 0 1996 0 1996 0 1996 #> 1679 TCGA-OL-A66K-01 1 1275 0 1275 0 1275 0 1275 #> 1680 TCGA-OL-A66L-01 0 1301 0 1301 0 1301 0 1301 #> 1681 TCGA-OL-A66N-01 0 792 0 792 0 792 0 792 #> 1682 TCGA-OL-A66O-01 0 528 0 528 0 528 0 528 #> 1683 TCGA-OL-A66P-01 0 428 0 428 0 428 0 428 #> 1684 TCGA-OL-A6VO-01 0 858 0 858 0 858 0 858 #> 1685 TCGA-OL-A6VQ-01 0 600 0 600 0 600 0 600 #> 1686 TCGA-OL-A6VR-01 0 1220 0 1220 0 1220 0 1220 #> 1687 TCGA-OL-A97C-01 0 271 0 271 NA NA 1 275 #> 1688 TCGA-PE-A5DC-01 1 1430 0 1430 NA NA 0 1430 #> 1689 TCGA-PE-A5DD-01 0 1953 0 1953 0 1953 0 1953 #> 1690 TCGA-PE-A5DE-01 0 2645 0 2645 NA NA 0 2645 #> 1691 TCGA-PL-A8LV-01 0 0 0 0 NA NA 0 0 #> 1692 TCGA-PL-A8LX-01 0 5 0 5 NA NA 0 5 #> 1693 TCGA-PL-A8LY-01 0 8 0 8 NA NA 0 8 #> 1694 TCGA-PL-A8LZ-01 0 302 0 302 NA NA 0 302 #> 1695 TCGA-S3-A6ZF-01 0 572 0 572 0 572 0 572 #> 1696 TCGA-S3-A6ZG-01 0 562 0 562 0 562 0 562 #> 1697 TCGA-S3-A6ZH-01 0 641 0 641 0 641 0 641 #> 1698 TCGA-S3-AA0Z-01 0 629 0 629 0 629 0 629 #> 1699 TCGA-S3-AA10-01 0 586 0 586 0 586 0 586 #> 1700 TCGA-S3-AA11-01 0 421 0 421 0 421 0 421 #> 1701 TCGA-S3-AA12-01 0 574 0 574 0 574 0 574 #> 1702 TCGA-S3-AA14-01 0 529 0 529 0 529 0 529 #> 1703 TCGA-S3-AA15-01 0 525 0 525 0 525 0 525 #> 1704 TCGA-S3-AA17-01 0 424 0 424 0 424 0 424 #> 1705 TCGA-UL-AAZ6-01 0 518 0 518 NA NA 0 518 #> 1706 TCGA-UU-A93S-01 1 116 1 116 NA NA 1 116 #> 1707 TCGA-V7-A7HQ-01 0 2033 0 2033 0 2033 0 2033 #> 1708 TCGA-W8-A86G-01 0 347 0 347 0 347 0 347 #> 1709 TCGA-WT-AB41-01 0 1611 0 1611 0 1611 0 1611 #> 1710 TCGA-WT-AB44-01 0 883 0 883 0 883 0 883 #> 1711 TCGA-XX-A899-01 0 467 0 467 0 467 0 467 #> 1712 TCGA-XX-A89A-01 0 488 0 488 0 488 0 488 #> 1713 TCGA-Z7-A8R5-01 0 3287 0 3287 NA NA 1 181 #> 1714 TCGA-Z7-A8R6-01 0 3256 0 3256 0 3256 0 3256 #> 1715 TCGA-2W-A8YY-01 0 533 0 533 0 533 0 533 #> 1716 TCGA-4J-AA1J-01 0 542 0 542 0 542 0 542 #> 1717 TCGA-BI-A0VR-01 0 1505 0 1505 NA NA 0 1505 #> 1718 TCGA-BI-A0VS-01 0 1735 0 1735 0 1735 0 1735 #> 1719 TCGA-BI-A20A-01 0 720 0 720 0 720 0 720 #> 1720 TCGA-C5-A0TN-01 1 348 1 348 NA NA 1 62 #> 1721 TCGA-C5-A1BE-01 1 2094 1 2094 1 1674 1 1674 #> 1722 TCGA-C5-A1BF-01 1 570 1 570 1 93 1 93 #> 1723 TCGA-C5-A1BI-01 0 1112 0 1112 0 1112 0 1112 #> 1724 TCGA-C5-A1BJ-01 0 4385 0 4385 0 4385 0 4385 #> 1725 TCGA-C5-A1BK-01 0 5385 0 5385 0 5385 0 5385 #> 1726 TCGA-C5-A1BL-01 0 5271 0 5271 0 5271 0 5271 #> 1727 TCGA-C5-A1BM-01 1 2520 0 2520 0 2520 0 2520 #> 1728 TCGA-C5-A1BN-01 1 166 1 166 NA NA 1 166 #> 1729 TCGA-C5-A1BQ-01 1 604 1 604 NA NA 0 604 #> 1730 TCGA-C5-A1M5-01 1 2052 1 2052 1 693 1 693 #> 1731 TCGA-C5-A1M6-01 1 955 1 955 1 316 1 316 #> 1732 TCGA-C5-A1M7-01 0 1409 0 1409 0 1409 0 1409 #> 1733 TCGA-C5-A1M8-01 0 919 0 919 0 919 0 919 #> 1734 TCGA-C5-A1M9-01 1 1065 1 1065 1 555 1 555 #> 1735 TCGA-C5-A1ME-01 0 1756 0 1756 0 1756 0 1756 #> 1736 TCGA-C5-A1MF-01 0 1617 0 1617 0 1617 0 1617 #> 1737 TCGA-C5-A1MH-01 1 1186 1 1186 1 178 1 178 #> 1738 TCGA-C5-A1MI-01 1 1083 1 1083 1 805 1 805 #> 1739 TCGA-C5-A1MJ-01 1 14 0 14 NA NA 0 14 #> 1740 TCGA-C5-A1MK-01 1 74 1 74 NA NA 1 74 #> 1741 TCGA-C5-A1ML-01 1 636 1 636 NA NA 1 636 #> 1742 TCGA-C5-A1MN-01 1 1245 0 1245 0 1245 0 1245 #> 1743 TCGA-C5-A1MP-01 0 109 0 109 0 109 0 109 #> 1744 TCGA-C5-A1MQ-01 0 1031 0 1031 0 1031 0 1031 #> 1745 TCGA-C5-A2LS-01 0 1345 0 1345 0 1345 0 1345 #> 1746 TCGA-C5-A2LT-01 0 2226 0 2226 0 2226 0 2226 #> 1747 TCGA-C5-A2LV-01 0 2234 0 2234 0 2234 0 2234 #> 1748 TCGA-C5-A2LX-01 0 2526 0 2526 0 2526 0 2526 #> 1749 TCGA-C5-A2LY-01 0 2383 0 2383 0 2383 0 2383 #> 1750 TCGA-C5-A2LZ-01 1 3046 1 3046 1 2893 1 2893 #> 1751 TCGA-C5-A2M1-01 0 1169 0 1169 0 1169 0 1169 #> 1752 TCGA-C5-A2M2-01 1 1011 NA 1011 NA NA 0 1011 #> 1753 TCGA-C5-A3HD-01 0 1582 0 1582 0 1582 0 1582 #> 1754 TCGA-C5-A3HE-01 0 548 0 548 NA NA 1 252 #> 1755 TCGA-C5-A3HF-01 1 543 1 543 NA NA 1 450 #> 1756 TCGA-C5-A3HL-01 0 621 0 621 0 621 0 621 #> 1757 TCGA-C5-A7CG-01 0 6408 0 6408 NA NA 0 6408 #> 1758 TCGA-C5-A7CH-01 0 4694 0 4694 NA NA 0 4694 #> 1759 TCGA-C5-A7CJ-01 1 3097 0 3097 NA NA 0 3097 #> 1760 TCGA-C5-A7CK-01 1 4086 0 4086 NA NA 0 4086 #> 1761 TCGA-C5-A7CL-01 1 471 1 471 NA NA 1 471 #> 1762 TCGA-C5-A7CM-01 0 619 0 619 0 619 0 619 #> 1763 TCGA-C5-A7CO-01 0 4482 0 4482 0 4482 0 4482 #> 1764 TCGA-C5-A7UC-01 1 523 0 523 NA NA 0 523 #> 1765 TCGA-C5-A7UE-01 0 4738 0 4738 0 4738 0 4738 #> 1766 TCGA-C5-A7UH-01 0 3988 0 3988 NA NA 0 3988 #> 1767 TCGA-C5-A7UI-01 1 2888 0 2888 NA NA 0 2888 #> 1768 TCGA-C5-A7X3-01 1 284 0 284 NA NA 0 284 #> 1769 TCGA-C5-A7X5-01 1 414 1 414 NA NA 1 414 #> 1770 TCGA-C5-A7X8-01 0 83 0 83 NA NA 0 83 #> 1771 TCGA-C5-A7XC-01 0 1551 0 1551 NA NA 0 1551 #> 1772 TCGA-C5-A8XH-01 1 1394 0 1394 NA NA 0 1394 #> 1773 TCGA-C5-A8XI-01 0 254 0 254 NA NA 0 254 #> 1774 TCGA-C5-A8XJ-01 0 4467 0 4467 NA NA 0 4467 #> 1775 TCGA-C5-A8XK-01 0 3039 0 3039 NA NA 0 3039 #> 1776 TCGA-C5-A8YQ-01 1 715 1 715 NA NA 1 715 #> 1777 TCGA-C5-A8YR-01 1 837 NA 837 NA NA 1 272 #> 1778 TCGA-C5-A8YT-01 1 633 1 633 NA NA 1 633 #> 1779 TCGA-C5-A8ZZ-01 0 636 0 636 NA NA 0 636 #> 1780 TCGA-C5-A901-01 0 518 0 518 NA NA 0 518 #> 1781 TCGA-C5-A902-01 0 149 0 149 NA NA 0 149 #> 1782 TCGA-C5-A905-01 0 4879 0 4879 NA NA 0 4879 #> 1783 TCGA-C5-A907-01 0 448 0 448 NA NA 0 448 #> 1784 TCGA-DG-A2KH-01 0 34 0 34 NA NA 0 34 #> 1785 TCGA-DG-A2KJ-01 0 2893 0 2893 0 2893 0 2893 #> 1786 TCGA-DG-A2KK-01 0 2496 0 2496 0 2496 0 2496 #> 1787 TCGA-DG-A2KL-01 0 1367 0 1367 0 1367 0 1367 #> 1788 TCGA-DG-A2KM-01 0 1946 0 1946 0 1946 0 1946 #> 1789 TCGA-DR-A0ZL-01 0 2669 0 2669 0 2669 0 2669 #> 1790 TCGA-DR-A0ZM-01 0 1791 0 1791 0 1791 0 1791 #> 1791 TCGA-DS-A0VK-01 1 1118 1 1118 NA NA 1 209 #> 1792 TCGA-DS-A0VL-01 0 81 0 81 0 81 0 81 #> 1793 TCGA-DS-A0VM-01 0 3589 0 3589 1 868 1 868 #> 1794 TCGA-DS-A0VN-01 0 3609 0 3609 0 3609 0 3609 #> 1795 TCGA-DS-A1O9-01 1 266 1 266 NA NA 1 266 #> 1796 TCGA-DS-A1OA-01 1 879 1 879 NA NA 1 379 #> 1797 TCGA-DS-A1OB-01 1 861 1 861 1 652 1 652 #> 1798 TCGA-DS-A1OC-01 0 376 0 376 0 376 0 376 #> 1799 TCGA-DS-A1OD-01 0 3874 0 3874 0 3874 0 3874 #> 1800 TCGA-DS-A3LQ-01 0 699 0 699 0 699 0 699 #> 1801 TCGA-DS-A5RQ-01 0 512 0 512 0 512 0 512 #> 1802 TCGA-DS-A7WF-01 1 492 1 492 NA NA 1 321 #> 1803 TCGA-DS-A7WH-01 0 533 0 533 0 533 0 533 #> 1804 TCGA-DS-A7WI-01 1 252 1 252 1 206 1 206 #> 1805 TCGA-EA-A1QS-01 0 1203 0 1203 0 1203 0 1203 #> 1806 TCGA-EA-A1QT-01 0 1243 0 1243 0 1243 0 1243 #> 1807 TCGA-EA-A3HQ-01 0 1136 0 1136 0 1136 0 1136 #> 1808 TCGA-EA-A3HR-01 0 940 0 940 0 940 0 940 #> 1809 TCGA-EA-A3HS-01 0 959 0 959 0 959 0 959 #> 1810 TCGA-EA-A3HT-01 0 954 0 954 0 954 0 954 #> 1811 TCGA-EA-A3HU-01 0 1013 0 1013 0 1013 0 1013 #> 1812 TCGA-EA-A3QD-01 0 397 0 397 0 397 0 397 #> 1813 TCGA-EA-A3QE-01 0 761 0 761 0 761 0 761 #> 1814 TCGA-EA-A3Y4-01 0 1122 0 1122 0 1122 0 1122 #> 1815 TCGA-EA-A410-01 0 803 0 803 0 803 0 803 #> 1816 TCGA-EA-A411-01 0 747 0 747 0 747 0 747 #> 1817 TCGA-EA-A439-01 0 965 0 965 1 316 1 316 #> 1818 TCGA-EA-A43B-01 0 791 0 791 0 791 0 791 #> 1819 TCGA-EA-A44S-01 0 369 0 369 NA NA 0 369 #> 1820 TCGA-EA-A4BA-01 0 755 0 755 0 755 0 755 #> 1821 TCGA-EA-A50E-01 1 227 1 227 NA NA 1 208 #> 1822 TCGA-EA-A556-01 0 453 0 453 0 453 0 453 #> 1823 TCGA-EA-A5FO-01 0 815 0 815 0 815 0 815 #> 1824 TCGA-EA-A5O9-01 0 788 0 788 0 788 0 788 #> 1825 TCGA-EA-A5ZD-01 0 830 0 830 0 830 0 830 #> 1826 TCGA-EA-A5ZE-01 0 829 0 829 1 425 1 425 #> 1827 TCGA-EA-A5ZF-01 0 828 0 828 1 440 1 440 #> 1828 TCGA-EA-A6QX-01 0 730 0 730 0 730 0 730 #> 1829 TCGA-EA-A78R-01 0 410 0 410 0 410 0 410 #> 1830 TCGA-EA-A97N-01 0 11 0 11 0 11 0 11 #> 1831 TCGA-EK-A2GZ-01 0 383 0 383 NA NA 0 383 #> 1832 TCGA-EK-A2H0-01 0 1847 0 1847 0 1847 0 1847 #> 1833 TCGA-EK-A2H1-01 0 799 0 799 NA NA 0 799 #> 1834 TCGA-EK-A2IP-01 0 202 0 202 NA NA 0 202 #> 1835 TCGA-EK-A2IR-01 0 3442 0 3442 0 3442 0 3442 #> 1836 TCGA-EK-A2PG-01 0 46 0 46 NA NA 0 46 #> 1837 TCGA-EK-A2PI-01 0 586 0 586 NA NA 0 586 #> 1838 TCGA-EK-A2PK-01 0 12 0 12 NA NA 0 12 #> 1839 TCGA-EK-A2PL-01 0 13 0 13 NA NA 0 13 #> 1840 TCGA-EK-A2PM-01 0 18 0 18 NA NA 0 18 #> 1841 TCGA-EK-A2R7-01 0 27 0 27 NA NA 0 27 #> 1842 TCGA-EK-A2R8-01 0 44 0 44 NA NA 0 44 #> 1843 TCGA-EK-A2R9-01 0 4 0 4 NA NA 0 4 #> 1844 TCGA-EK-A2RA-01 0 1246 0 1246 NA NA 0 1246 #> 1845 TCGA-EK-A2RB-01 0 9 0 9 NA NA 0 9 #> 1846 TCGA-EK-A2RC-01 0 129 0 129 NA NA 0 129 #> 1847 TCGA-EK-A2RE-01 0 57 0 57 NA NA 0 57 #> 1848 TCGA-EK-A2RJ-01 0 53 0 53 NA NA 0 53 #> 1849 TCGA-EK-A2RK-01 0 13 0 13 NA NA 0 13 #> 1850 TCGA-EK-A2RL-01 1 1453 1 1453 NA NA 1 1143 #> 1851 TCGA-EK-A2RM-01 0 50 0 50 NA NA 0 50 #> 1852 TCGA-EK-A2RN-01 0 71 0 71 NA NA 0 71 #> 1853 TCGA-EK-A2RO-01 0 2 0 2 NA NA 0 2 #> 1854 TCGA-EK-A3GJ-01 0 3 0 3 NA NA 0 3 #> 1855 TCGA-EK-A3GK-01 0 15 0 15 NA NA 0 15 #> 1856 TCGA-EK-A3GM-01 0 0 0 0 NA NA 0 0 #> 1857 TCGA-EK-A3GN-01 0 27 0 27 NA NA 0 27 #> 1858 TCGA-EX-A1H5-01 0 619 0 619 0 619 0 619 #> 1859 TCGA-EX-A1H6-01 0 241 0 241 0 241 0 241 #> 1860 TCGA-EX-A3L1-01 0 463 0 463 0 463 0 463 #> 1861 TCGA-EX-A449-01 0 447 0 447 NA NA 0 447 #> 1862 TCGA-EX-A69L-01 0 602 0 602 0 602 0 602 #> 1863 TCGA-EX-A69M-01 1 253 0 253 0 253 1 77 #> 1864 TCGA-EX-A8YF-01 0 473 0 473 1 396 1 396 #> 1865 TCGA-FU-A23K-01 0 372 0 372 0 372 0 372 #> 1866 TCGA-FU-A23L-01 0 725 0 725 0 725 0 725 #> 1867 TCGA-FU-A2QG-01 0 579 0 579 0 579 0 579 #> 1868 TCGA-FU-A3EO-01 0 490 0 490 0 490 0 490 #> 1869 TCGA-FU-A3EO-11 0 490 0 490 0 490 0 490 #> 1870 TCGA-FU-A3HY-01 0 954 0 954 0 954 0 954 #> 1871 TCGA-FU-A3HZ-01 0 1103 0 1103 0 1103 0 1103 #> 1872 TCGA-FU-A3NI-01 1 638 0 638 NA NA 0 638 #> 1873 TCGA-FU-A3TQ-01 0 795 0 795 0 795 0 795 #> 1874 TCGA-FU-A3TX-01 0 45 0 45 NA NA 0 45 #> 1875 TCGA-FU-A3WB-01 0 491 0 491 0 491 0 491 #> 1876 TCGA-FU-A3YQ-01 0 861 0 861 0 861 0 861 #> 1877 TCGA-FU-A40J-01 0 426 0 426 0 426 0 426 #> 1878 TCGA-FU-A57G-01 0 1078 0 1078 0 1078 0 1078 #> 1879 TCGA-FU-A5XV-01 0 321 0 321 0 321 0 321 #> 1880 TCGA-FU-A770-01 0 34 0 34 NA NA 0 34 #> 1881 TCGA-GH-A9DA-01 0 540 0 540 0 540 0 540 #> 1882 TCGA-HG-A2PA-01 1 773 1 773 NA NA 1 773 #> 1883 TCGA-HM-A3JJ-01 1 659 1 659 1 385 1 385 #> 1884 TCGA-HM-A3JJ-11 1 659 1 659 1 385 1 385 #> 1885 TCGA-HM-A3JK-01 0 632 0 632 0 632 0 632 #> 1886 TCGA-HM-A4S6-01 0 454 0 454 0 454 0 454 #> 1887 TCGA-HM-A6W2-06 0 287 0 287 NA NA 0 287 #> 1888 TCGA-HM-A6W2-01 0 287 0 287 NA NA 0 287 #> 1889 TCGA-IR-A3L7-01 0 4483 0 4483 0 4483 0 4483 #> 1890 TCGA-IR-A3LA-01 0 4172 0 4172 0 4172 0 4172 #> 1891 TCGA-IR-A3LB-01 1 2032 1 2032 1 317 1 317 #> 1892 TCGA-IR-A3LC-01 0 3935 0 3935 0 3935 0 3935 #> 1893 TCGA-IR-A3LF-01 0 2949 0 2949 0 2949 0 2949 #> 1894 TCGA-IR-A3LH-01 0 2394 0 2394 0 2394 0 2394 #> 1895 TCGA-IR-A3LI-01 0 2493 0 2493 NA NA 0 2493 #> 1896 TCGA-IR-A3LK-01 1 908 1 908 1 574 1 574 #> 1897 TCGA-IR-A3LL-01 0 1106 0 1106 0 1106 0 1106 #> 1898 TCGA-JW-A5VG-01 0 834 0 834 0 834 0 834 #> 1899 TCGA-JW-A5VH-01 1 100 1 100 NA NA 1 94 #> 1900 TCGA-JW-A5VI-01 0 747 0 747 1 558 1 558 #> 1901 TCGA-JW-A5VJ-01 0 652 0 652 NA NA 1 267 #> 1902 TCGA-JW-A5VK-01 0 623 0 623 0 623 0 623 #> 1903 TCGA-JW-A5VL-01 0 474 0 474 0 474 0 474 #> 1904 TCGA-JW-A69B-01 0 863 0 863 0 863 0 863 #> 1905 TCGA-JW-A852-01 1 252 1 252 0 252 1 153 #> 1906 TCGA-JW-AAVH-01 0 552 0 552 0 552 0 552 #> 1907 TCGA-JX-A3PZ-01 1 642 1 642 1 491 1 491 #> 1908 TCGA-JX-A3Q0-01 0 6375 0 6375 0 6375 0 6375 #> 1909 TCGA-JX-A3Q8-01 0 1357 0 1357 0 1357 0 1357 #> 1910 TCGA-JX-A5QV-01 0 636 0 636 0 636 0 636 #> 1911 TCGA-LP-A4AU-01 0 343 0 343 NA NA 0 343 #> 1912 TCGA-LP-A4AV-01 0 0 0 0 NA NA 0 0 #> 1913 TCGA-LP-A4AW-01 0 27 0 27 NA NA 0 27 #> 1914 TCGA-LP-A4AX-01 0 380 0 380 0 380 0 380 #> 1915 TCGA-LP-A5U2-01 0 9 0 9 0 9 0 9 #> 1916 TCGA-LP-A5U3-01 0 25 0 25 0 25 0 25 #> 1917 TCGA-LP-A7HU-01 0 406 0 406 0 406 0 406 #> 1918 TCGA-MA-AA3W-01 0 685 0 685 0 685 0 685 #> 1919 TCGA-MA-AA3X-01 0 617 0 617 0 617 0 617 #> 1920 TCGA-MA-AA3Y-01 0 542 0 542 0 542 0 542 #> 1921 TCGA-MA-AA3Z-01 0 595 0 595 0 595 0 595 #> 1922 TCGA-MA-AA41-01 0 279 0 279 NA NA 0 279 #> 1923 TCGA-MA-AA42-01 0 259 0 259 0 259 0 259 #> 1924 TCGA-MA-AA43-01 0 346 0 346 0 346 0 346 #> 1925 TCGA-MU-A51Y-01 0 854 0 854 0 854 0 854 #> 1926 TCGA-MU-A5YI-01 0 1053 0 1053 NA NA 1 630 #> 1927 TCGA-MU-A8JM-01 0 607 0 607 0 607 0 607 #> 1928 TCGA-MY-A5BD-01 0 1667 0 1667 NA NA 0 1667 #> 1929 TCGA-MY-A5BE-01 0 1066 0 1066 0 1066 0 1066 #> 1930 TCGA-MY-A5BF-01 0 634 0 634 NA NA 0 634 #> 1931 TCGA-MY-A5BF-11 0 634 0 634 NA NA 0 634 #> 1932 TCGA-MY-A913-01 0 524 0 524 0 524 0 524 #> 1933 TCGA-PN-A8MA-01 0 90 0 90 NA NA 0 90 #> 1934 TCGA-Q1-A5R1-01 0 474 0 474 0 474 0 474 #> 1935 TCGA-Q1-A5R2-01 0 499 0 499 NA NA 0 499 #> 1936 TCGA-Q1-A5R3-01 0 485 0 485 0 485 0 485 #> 1937 TCGA-Q1-A6DT-01 1 275 1 275 NA NA 1 275 #> 1938 TCGA-Q1-A6DV-01 0 491 0 491 0 491 0 491 #> 1939 TCGA-Q1-A6DW-01 0 534 0 534 NA NA 0 534 #> 1940 TCGA-Q1-A73O-01 0 428 0 428 0 428 0 428 #> 1941 TCGA-Q1-A73P-01 0 483 0 483 0 483 0 483 #> 1942 TCGA-Q1-A73Q-01 0 284 0 284 NA NA 0 284 #> 1943 TCGA-Q1-A73R-01 0 567 0 567 0 567 0 567 #> 1944 TCGA-Q1-A73S-01 0 688 0 688 0 688 0 688 #> 1945 TCGA-R2-A69V-01 0 596 0 596 0 596 0 596 #> 1946 TCGA-RA-A741-01 0 444 0 444 0 444 0 444 #> 1947 TCGA-UC-A7PD-01 1 355 1 355 1 202 1 202 #> 1948 TCGA-UC-A7PF-01 1 2859 NA 2859 NA NA 0 2859 #> 1949 TCGA-UC-A7PG-06 1 370 1 370 NA NA 1 370 #> 1950 TCGA-UC-A7PG-01 1 370 1 370 NA NA 1 370 #> 1951 TCGA-UC-A7PI-01 0 2114 0 2114 1 778 1 778 #> 1952 TCGA-VS-A8EB-01 1 305 1 305 NA NA 1 305 #> 1953 TCGA-VS-A8EC-01 0 1415 0 1415 0 1415 0 1415 #> 1954 TCGA-VS-A8EG-01 0 1386 0 1386 0 1386 0 1386 #> 1955 TCGA-VS-A8EH-01 0 986 0 986 0 986 0 986 #> 1956 TCGA-VS-A8EI-01 0 729 0 729 0 729 0 729 #> 1957 TCGA-VS-A8EJ-01 1 607 1 607 NA NA 1 607 #> 1958 TCGA-VS-A8EK-01 1 829 1 829 NA NA 1 829 #> 1959 TCGA-VS-A8EL-01 0 1992 0 1992 0 1992 0 1992 #> 1960 TCGA-VS-A8Q8-01 1 978 1 978 NA NA 1 488 #> 1961 TCGA-VS-A8Q9-01 0 1630 0 1630 0 1630 0 1630 #> 1962 TCGA-VS-A8QA-01 0 1099 0 1099 0 1099 0 1099 #> 1963 TCGA-VS-A8QC-01 1 350 1 350 NA NA 1 263 #> 1964 TCGA-VS-A8QF-01 0 1800 0 1800 0 1800 0 1800 #> 1965 TCGA-VS-A8QH-01 1 1210 1 1210 NA NA 1 1210 #> 1966 TCGA-VS-A8QM-01 1 951 1 951 NA NA 1 951 #> 1967 TCGA-VS-A94W-01 0 1243 0 1243 0 1243 0 1243 #> 1968 TCGA-VS-A94X-01 1 506 1 506 NA NA 1 506 #> 1969 TCGA-VS-A94Y-01 1 144 1 144 NA NA 1 144 #> 1970 TCGA-VS-A94Z-01 0 1015 0 1015 0 1015 0 1015 #> 1971 TCGA-VS-A950-01 0 1221 0 1221 NA NA 0 1221 #> 1972 TCGA-VS-A952-01 0 1778 0 1778 0 1778 0 1778 #> 1973 TCGA-VS-A953-01 1 477 1 477 NA NA 1 477 #> 1974 TCGA-VS-A954-01 0 1714 0 1714 0 1714 0 1714 #> 1975 TCGA-VS-A957-01 0 1688 0 1688 0 1688 0 1688 #> 1976 TCGA-VS-A958-01 0 1525 0 1525 0 1525 0 1525 #> 1977 TCGA-VS-A959-01 0 1561 0 1561 0 1561 0 1561 #> 1978 TCGA-VS-A9U5-01 0 1535 0 1535 0 1535 0 1535 #> 1979 TCGA-VS-A9U6-01 0 1320 0 1320 NA NA 1 711 #> 1980 TCGA-VS-A9U7-01 0 1472 0 1472 0 1472 0 1472 #> 1981 TCGA-VS-A9UB-01 0 911 0 911 0 911 0 911 #> 1982 TCGA-VS-A9UC-01 0 825 0 825 NA NA 0 825 #> 1983 TCGA-VS-A9UD-01 0 739 0 739 0 739 0 739 #> 1984 TCGA-VS-A9UH-01 0 1427 0 1427 NA NA 0 1427 #> 1985 TCGA-VS-A9UI-01 1 1372 0 1372 0 1372 0 1372 #> 1986 TCGA-VS-A9UJ-01 1 52 1 52 NA NA 1 52 #> 1987 TCGA-VS-A9UL-01 1 442 1 442 NA NA 1 336 #> 1988 TCGA-VS-A9UM-01 1 829 0 829 NA NA 0 829 #> 1989 TCGA-VS-A9UO-01 0 1456 0 1456 0 1456 0 1456 #> 1990 TCGA-VS-A9UP-01 0 1444 0 1444 1 352 1 352 #> 1991 TCGA-VS-A9UQ-01 0 1263 0 1263 1 561 1 561 #> 1992 TCGA-VS-A9UR-01 0 793 0 793 1 675 1 675 #> 1993 TCGA-VS-A9UT-01 0 482 0 482 0 482 0 482 #> 1994 TCGA-VS-A9UU-01 0 442 0 442 0 442 0 442 #> 1995 TCGA-VS-A9UV-01 1 104 1 104 NA NA 1 104 #> 1996 TCGA-VS-A9UY-01 1 555 1 555 NA NA 1 412 #> 1997 TCGA-VS-A9UZ-01 0 2044 0 2044 0 2044 0 2044 #> 1998 TCGA-VS-A9V0-01 0 573 0 573 1 475 1 475 #> 1999 TCGA-VS-A9V1-01 1 157 1 157 NA NA 1 58 #> 2000 TCGA-VS-A9V2-01 0 555 0 555 0 555 0 555 #> 2001 TCGA-VS-A9V3-01 0 540 0 540 NA NA 1 456 #> 2002 TCGA-VS-A9V4-01 1 132 1 132 NA NA 1 100 #> 2003 TCGA-VS-A9V5-01 1 494 1 494 NA NA 1 494 #> 2004 TCGA-VS-AA62-01 1 469 1 469 NA NA 1 469 #> 2005 TCGA-WL-A834-01 0 791 0 791 NA NA 0 791 #> 2006 TCGA-XS-A8TJ-01 0 890 0 890 0 890 0 890 #> 2007 TCGA-ZJ-A8QO-01 0 0 0 0 NA NA 0 0 #> 2008 TCGA-ZJ-A8QQ-01 0 2056 0 2056 0 2056 0 2056 #> 2009 TCGA-ZJ-A8QR-01 1 582 NA 582 NA NA 0 582 #> 2010 TCGA-ZJ-AAX4-01 0 21 0 21 NA NA 0 21 #> 2011 TCGA-ZJ-AAX8-01 0 0 0 0 NA NA 0 0 #> 2012 TCGA-ZJ-AAXA-01 0 43 0 43 NA NA 0 43 #> 2013 TCGA-ZJ-AAXB-01 0 0 0 0 NA NA 0 0 #> 2014 TCGA-ZJ-AAXD-01 0 0 0 0 NA NA 0 0 #> 2015 TCGA-ZJ-AAXF-01 0 0 0 0 NA NA 0 0 #> 2016 TCGA-ZJ-AAXI-01 0 0 0 0 NA NA 0 0 #> 2017 TCGA-ZJ-AAXJ-01 0 0 0 0 NA NA 0 0 #> 2018 TCGA-ZJ-AAXN-01 0 0 0 0 NA NA 0 0 #> 2019 TCGA-ZJ-AAXT-01 0 0 0 0 NA NA 0 0 #> 2020 TCGA-ZJ-AAXU-01 0 5 0 5 NA NA 0 5 #> 2021 TCGA-ZJ-AB0H-01 0 0 0 0 NA NA 0 0 #> 2022 TCGA-ZJ-AB0I-01 0 0 0 0 NA NA 0 0 #> 2023 TCGA-ZX-AA5X-01 0 119 0 119 NA NA 0 119 #> 2024 TCGA-3X-AAV9-01 1 339 1 339 1 216 1 216 #> 2025 TCGA-3X-AAVA-01 1 445 1 445 1 264 1 264 #> 2026 TCGA-3X-AAVB-01 0 402 0 402 NA NA 0 402 #> 2027 TCGA-3X-AAVC-01 0 709 0 709 0 709 0 709 #> 2028 TCGA-3X-AAVE-01 0 650 0 650 0 650 0 650 #> 2029 TCGA-4G-AAZO-01 0 1177 0 1177 NA NA 1 424 #> 2030 TCGA-4G-AAZT-01 0 420 0 420 0 420 0 420 #> 2031 TCGA-W5-AA2G-01 0 1976 0 1976 0 1976 0 1976 #> 2032 TCGA-W5-AA2H-01 0 1077 0 1077 0 1077 0 1077 #> 2033 TCGA-W5-AA2I-01 1 1939 1 1939 0 1939 1 217 #> 2034 TCGA-W5-AA2I-11 1 1939 1 1939 0 1939 1 217 #> 2035 TCGA-W5-AA2O-01 1 640 1 640 1 215 1 215 #> 2036 TCGA-W5-AA2Q-01 0 50 0 50 0 50 0 50 #> 2037 TCGA-W5-AA2Q-11 0 50 0 50 0 50 0 50 #> 2038 TCGA-W5-AA2R-01 0 1542 0 1542 0 1542 0 1542 #> 2039 TCGA-W5-AA2R-11 0 1542 0 1542 0 1542 0 1542 #> 2040 TCGA-W5-AA2T-01 1 1220 1 1220 1 295 1 295 #> 2041 TCGA-W5-AA2U-01 1 627 1 627 0 627 1 95 #> 2042 TCGA-W5-AA2U-11 1 627 1 627 0 627 1 95 #> 2043 TCGA-W5-AA2W-01 1 924 1 924 NA NA 1 237 #> 2044 TCGA-W5-AA2X-01 1 271 NA 271 NA NA 0 271 #> 2045 TCGA-W5-AA2X-11 1 271 NA 271 NA NA 0 271 #> 2046 TCGA-W5-AA2Z-01 0 1614 0 1614 NA NA 0 1614 #> 2047 TCGA-W5-AA30-01 0 1153 0 1153 0 1153 0 1153 #> 2048 TCGA-W5-AA30-11 0 1153 0 1153 0 1153 0 1153 #> 2049 TCGA-W5-AA31-01 0 10 0 10 0 10 0 10 #> 2050 TCGA-W5-AA31-11 0 10 0 10 0 10 0 10 #> 2051 TCGA-W5-AA33-01 0 1449 0 1449 0 1449 0 1449 #> 2052 TCGA-W5-AA34-01 1 555 1 555 1 40 1 40 #> 2053 TCGA-W5-AA34-11 1 555 1 555 1 40 1 40 #> 2054 TCGA-W5-AA36-01 1 1402 1 1402 NA NA 1 362 #> 2055 TCGA-W5-AA38-01 0 1471 0 1471 1 377 1 377 #> 2056 TCGA-W5-AA39-01 1 170 1 170 NA NA 1 170 #> 2057 TCGA-W6-AA0S-01 0 808 0 808 1 549 1 549 #> 2058 TCGA-WD-A7RX-01 1 21 0 21 NA NA 0 21 #> 2059 TCGA-YR-A95A-01 1 26 1 26 NA NA 1 17 #> 2060 TCGA-ZD-A8I3-01 1 169 1 169 1 59 1 59 #> 2061 TCGA-ZH-A8Y1-01 1 385 1 385 NA NA 1 49 #> 2062 TCGA-ZH-A8Y2-01 1 701 1 701 1 198 1 198 #> 2063 TCGA-ZH-A8Y4-01 1 741 1 741 NA NA 1 281 #> 2064 TCGA-ZH-A8Y5-01 0 1229 0 1229 NA NA 1 242 #> 2065 TCGA-ZH-A8Y6-01 0 519 0 519 0 519 0 519 #> 2066 TCGA-ZH-A8Y8-01 0 602 0 602 0 602 0 602 #> 2067 TCGA-ZU-A8S4-01 1 98 1 98 1 72 1 72 #> 2068 TCGA-ZU-A8S4-11 1 98 1 98 1 72 1 72 #> 2069 TCGA-3L-AA1B-01 0 475 0 475 0 475 0 475 #> 2070 TCGA-4N-A93T-01 0 146 0 146 NA NA 0 146 #> 2071 TCGA-4T-AA8H-01 0 385 0 385 0 385 0 385 #> 2072 TCGA-5M-AAT4-01 1 49 1 49 NA NA 1 49 #> 2073 TCGA-5M-AAT6-01 1 290 1 290 NA NA 1 219 #> 2074 TCGA-5M-AATE-01 0 1200 0 1200 NA NA 1 810 #> 2075 TCGA-A6-2671-11 1 1331 1 1331 NA NA 1 535 #> 2076 TCGA-A6-2672-01 0 1419 0 1419 0 1419 0 1419 #> 2077 TCGA-A6-2674-01 0 1331 0 1331 NA NA 1 735 #> 2078 TCGA-A6-2675-01 0 1321 0 1321 0 1321 0 1321 #> 2079 TCGA-A6-2675-11 0 1321 0 1321 0 1321 0 1321 #> 2080 TCGA-A6-2677-01 1 740 0 740 NA NA 0 740 #> 2081 TCGA-A6-2678-11 0 1286 0 1286 0 1286 0 1286 #> 2082 TCGA-A6-2679-11 0 1366 0 1366 0 1366 0 1366 #> 2083 TCGA-A6-2680-11 0 1068 0 1068 0 1068 0 1068 #> 2084 TCGA-A6-2682-01 1 424 1 424 NA NA 1 381 #> 2085 TCGA-A6-2682-11 1 424 1 424 NA NA 1 381 #> 2086 TCGA-A6-2683-11 1 504 1 504 NA NA 1 300 #> 2087 TCGA-A6-2684-01 0 1127 0 1127 NA NA 1 976 #> 2088 TCGA-A6-2684-11 0 1127 0 1127 NA NA 1 976 #> 2089 TCGA-A6-2685-01 0 1133 0 1133 NA NA 1 948 #> 2090 TCGA-A6-2685-11 0 1133 0 1133 NA NA 1 948 #> 2091 TCGA-A6-2686-01 1 1126 0 1126 0 1126 0 1126 #> 2092 TCGA-A6-2686-11 1 1126 0 1126 0 1126 0 1126 #> 2093 TCGA-A6-3809-01 0 996 0 996 NA NA 0 996 #> 2094 TCGA-A6-3810-01 0 1111 0 1111 0 1111 0 1111 #> 2095 TCGA-A6-4105-01 1 442 0 442 NA NA 1 364 #> 2096 TCGA-A6-5656-01 0 1001 0 1001 0 1001 0 1001 #> 2097 TCGA-A6-5657-01 0 962 0 962 0 962 0 962 #> 2098 TCGA-A6-5659-01 0 926 0 926 0 926 0 926 #> 2099 TCGA-A6-5659-11 0 926 0 926 0 926 0 926 #> 2100 TCGA-A6-5660-01 0 888 0 888 0 888 0 888 #> 2101 TCGA-A6-5661-01 0 1020 0 1020 0 1020 0 1020 #> 2102 TCGA-A6-5662-01 0 718 0 718 NA NA 1 495 #> 2103 TCGA-A6-5662-11 0 718 0 718 NA NA 1 495 #> 2104 TCGA-A6-5664-01 0 672 0 672 NA NA 1 183 #> 2105 TCGA-A6-5665-01 0 671 0 671 NA NA 1 529 #> 2106 TCGA-A6-5665-11 0 671 0 671 NA NA 1 529 #> 2107 TCGA-A6-5666-01 0 995 0 995 1 509 1 509 #> 2108 TCGA-A6-5667-01 0 887 0 887 0 887 0 887 #> 2109 TCGA-A6-5667-11 0 887 0 887 0 887 0 887 #> 2110 TCGA-A6-6137-01 0 824 0 824 0 824 0 824 #> 2111 TCGA-A6-6138-01 0 685 0 685 NA NA 0 685 #> 2112 TCGA-A6-6140-01 0 734 0 734 0 734 0 734 #> 2113 TCGA-A6-6141-01 0 255 0 255 NA NA 0 255 #> 2114 TCGA-A6-6142-01 0 763 0 763 NA NA 1 654 #> 2115 TCGA-A6-6648-01 0 766 0 766 NA NA 1 686 #> 2116 TCGA-A6-6649-01 0 735 0 735 0 735 0 735 #> 2117 TCGA-A6-6650-01 0 627 0 627 NA NA 0 627 #> 2118 TCGA-A6-6651-01 0 662 0 662 NA NA 0 662 #> 2119 TCGA-A6-6652-01 0 751 0 751 NA NA 0 751 #> 2120 TCGA-A6-6653-01 0 742 0 742 0 742 0 742 #> 2121 TCGA-A6-6654-01 0 726 0 726 0 726 0 726 #> 2122 TCGA-A6-6780-01 0 612 0 612 0 612 0 612 #> 2123 TCGA-A6-6781-01 0 598 0 598 0 598 0 598 #> 2124 TCGA-A6-6782-01 0 617 0 617 0 617 0 617 #> 2125 TCGA-A6-A565-01 1 494 1 494 NA NA 1 301 #> 2126 TCGA-A6-A566-01 1 758 1 758 NA NA 1 257 #> 2127 TCGA-A6-A567-01 1 1881 1 1881 NA NA 1 612 #> 2128 TCGA-A6-A56B-01 1 1711 0 1711 1 1678 1 1678 #> 2129 TCGA-A6-A5ZU-01 0 293 0 293 0 293 0 293 #> 2130 TCGA-AA-3489-01 1 214 1 214 NA NA 1 214 #> 2131 TCGA-AA-3489-11 1 214 1 214 NA NA 1 214 #> 2132 TCGA-AA-3492-01 1 92 0 92 NA NA 0 92 #> 2133 TCGA-AA-3495-01 0 1127 0 1127 0 1127 0 1127 #> 2134 TCGA-AA-3496-01 0 31 0 31 NA NA 0 31 #> 2135 TCGA-AA-3496-11 0 31 0 31 NA NA 0 31 #> 2136 TCGA-AA-3502-01 0 1065 0 1065 0 1065 0 1065 #> 2137 TCGA-AA-3506-01 0 1765 0 1765 NA NA 0 1765 #> 2138 TCGA-AA-3509-01 0 1915 0 1915 0 1915 0 1915 #> 2139 TCGA-AA-3511-01 0 212 0 212 1 59 1 59 #> 2140 TCGA-AA-3511-11 0 212 0 212 1 59 1 59 #> 2141 TCGA-AA-3514-11 0 31 0 31 NA NA 0 31 #> 2142 TCGA-AA-3516-11 1 396 1 396 NA NA 1 396 #> 2143 TCGA-AA-3517-11 0 1186 0 1186 1 821 1 821 #> 2144 TCGA-AA-3518-11 0 31 0 31 NA NA 0 31 #> 2145 TCGA-AA-3520-11 0 731 0 731 NA NA 0 731 #> 2146 TCGA-AA-3522-11 0 1127 0 1127 0 1127 0 1127 #> 2147 TCGA-AA-3525-11 0 245 0 245 NA NA 0 245 #> 2148 TCGA-AA-3526-01 0 580 0 580 0 580 0 580 #> 2149 TCGA-AA-3527-11 0 0 0 0 NA NA 0 0 #> 2150 TCGA-AA-3531-11 0 1035 0 1035 0 1035 0 1035 #> 2151 TCGA-AA-3534-11 0 882 0 882 0 882 0 882 #> 2152 TCGA-AA-3655-01 0 1856 0 1856 0 1856 0 1856 #> 2153 TCGA-AA-3655-11 0 1856 0 1856 0 1856 0 1856 #> 2154 TCGA-AA-3660-01 0 2375 0 2375 0 2375 0 2375 #> 2155 TCGA-AA-3660-11 0 2375 0 2375 0 2375 0 2375 #> 2156 TCGA-AA-3662-01 0 184 0 184 NA NA 0 184 #> 2157 TCGA-AA-3662-11 0 184 0 184 NA NA 0 184 #> 2158 TCGA-AA-3663-01 0 212 0 212 0 212 0 212 #> 2159 TCGA-AA-3663-11 0 212 0 212 0 212 0 212 #> 2160 TCGA-AA-3675-01 0 1431 0 1431 0 1431 0 1431 #> 2161 TCGA-AA-3685-01 0 1127 0 1127 0 1127 0 1127 #> 2162 TCGA-AA-3697-01 0 2587 0 2587 NA NA 0 2587 #> 2163 TCGA-AA-3697-11 0 2587 0 2587 NA NA 0 2587 #> 2164 TCGA-AA-3712-01 0 0 0 0 NA NA 0 0 #> 2165 TCGA-AA-3712-11 0 0 0 0 NA NA 0 0 #> 2166 TCGA-AA-3713-01 0 579 0 579 NA NA 0 579 #> 2167 TCGA-AA-3713-11 0 579 0 579 NA NA 0 579 #> 2168 TCGA-AA-A01P-01 1 1158 1 1158 NA NA 1 762 #> 2169 TCGA-AA-A01X-01 0 791 0 791 NA NA 1 791 #> 2170 TCGA-AA-A01Z-01 0 1126 0 1126 NA NA 1 1126 #> 2171 TCGA-AA-A02K-01 1 426 1 426 NA NA 1 306 #> 2172 TCGA-AA-A02Y-01 0 1216 0 1216 0 1216 0 1216 #> 2173 TCGA-AD-5900-01 0 370 0 370 0 370 0 370 #> 2174 TCGA-AD-6548-01 0 650 0 650 0 650 0 650 #> 2175 TCGA-AD-6888-01 1 472 1 472 1 343 1 343 #> 2176 TCGA-AD-6889-01 1 2532 0 2532 1 1516 1 1516 #> 2177 TCGA-AD-6890-01 0 746 0 746 0 746 0 746 #> 2178 TCGA-AD-6895-01 0 763 0 763 0 763 0 763 #> 2179 TCGA-AD-6899-01 1 176 0 176 0 176 0 176 #> 2180 TCGA-AD-6901-01 1 682 1 682 1 468 1 468 #> 2181 TCGA-AD-6963-01 0 834 0 834 0 834 0 834 #> 2182 TCGA-AD-6964-01 1 331 1 331 NA NA 1 325 #> 2183 TCGA-AD-6965-01 0 805 0 805 1 648 1 648 #> 2184 TCGA-AD-A5EJ-01 0 0 0 0 NA NA 0 0 #> 2185 TCGA-AD-A5EK-01 0 500 0 500 0 500 0 500 #> 2186 TCGA-AM-5820-01 0 14 0 14 NA NA 0 14 #> 2187 TCGA-AM-5821-01 0 28 0 28 NA NA 0 28 #> 2188 TCGA-AU-3779-01 0 441 0 441 NA NA 0 441 #> 2189 TCGA-AU-6004-01 0 824 0 824 NA NA 0 824 #> 2190 TCGA-AY-5543-01 0 1004 0 1004 NA NA 0 1004 #> 2191 TCGA-AY-6196-01 0 6 0 6 NA NA 0 6 #> 2192 TCGA-AY-6197-01 0 652 0 652 0 652 0 652 #> 2193 TCGA-AY-6386-01 0 542 0 542 0 542 0 542 #> 2194 TCGA-AY-A54L-01 0 525 0 525 1 396 1 396 #> 2195 TCGA-AY-A69D-01 0 543 0 543 0 543 0 543 #> 2196 TCGA-AY-A71X-01 0 588 0 588 0 588 0 588 #> 2197 TCGA-AY-A8YK-01 0 573 0 573 NA NA 0 573 #> 2198 TCGA-AZ-4313-01 0 2310 0 2310 0 2310 0 2310 #> 2199 TCGA-AZ-4315-01 0 1776 0 1776 NA NA 0 1776 #> 2200 TCGA-AZ-4323-01 1 43 1 43 NA NA 1 43 #> 2201 TCGA-AZ-4614-01 1 172 1 172 NA NA 1 172 #> 2202 TCGA-AZ-4615-01 0 1002 0 1002 NA NA 1 688 #> 2203 TCGA-AZ-4616-01 1 156 1 156 NA NA 1 156 #> 2204 TCGA-AZ-4682-01 1 680 1 680 NA NA 1 680 #> 2205 TCGA-AZ-4684-01 0 1977 0 1977 NA NA 1 411 #> 2206 TCGA-AZ-5403-01 1 1910 1 1910 NA NA 1 304 #> 2207 TCGA-AZ-5407-01 0 2683 0 2683 0 2683 0 2683 #> 2208 TCGA-AZ-6598-01 1 1503 0 1503 0 1503 0 1503 #> 2209 TCGA-AZ-6598-11 1 1503 0 1503 0 1503 0 1503 #> 2210 TCGA-AZ-6599-01 1 206 0 206 0 206 0 206 #> 2211 TCGA-AZ-6599-11 1 206 0 206 0 206 0 206 #> 2212 TCGA-AZ-6600-01 1 368 1 368 NA NA 1 368 #> 2213 TCGA-AZ-6600-11 1 368 1 368 NA NA 1 368 #> 2214 TCGA-AZ-6601-01 1 3042 1 3042 NA NA 1 2270 #> 2215 TCGA-AZ-6601-11 1 3042 1 3042 NA NA 1 2270 #> 2216 TCGA-AZ-6603-01 1 899 0 899 0 899 0 899 #> 2217 TCGA-AZ-6603-11 1 899 0 899 0 899 0 899 #> 2218 TCGA-AZ-6605-01 1 159 0 159 NA NA 0 159 #> 2219 TCGA-AZ-6605-11 1 159 0 159 NA NA 0 159 #> 2220 TCGA-AZ-6606-01 1 357 1 357 NA NA 1 357 #> 2221 TCGA-AZ-6607-01 1 97 1 97 NA NA 1 97 #> 2222 TCGA-AZ-6608-01 1 59 NA 59 NA NA 0 59 #> 2223 TCGA-CA-5254-01 0 386 0 386 0 386 0 386 #> 2224 TCGA-CA-5255-01 0 376 0 376 0 376 0 376 #> 2225 TCGA-CA-5256-01 0 379 0 379 0 379 0 379 #> 2226 TCGA-CA-5796-01 0 377 0 377 0 377 0 377 #> 2227 TCGA-CA-5797-01 0 383 0 383 0 383 0 383 #> 2228 TCGA-CA-6715-01 0 383 0 383 0 383 0 383 #> 2229 TCGA-CA-6716-01 0 371 0 371 0 371 0 371 #> 2230 TCGA-CA-6717-01 0 388 0 388 0 388 0 388 #> 2231 TCGA-CA-6718-01 1 306 1 306 1 207 1 207 #> 2232 TCGA-CA-6719-01 0 435 0 435 NA NA 1 354 #> 2233 TCGA-CK-4947-01 0 534 0 534 NA NA 1 21 #> 2234 TCGA-CK-4948-01 0 4502 0 4502 0 4502 0 4502 #> 2235 TCGA-CK-4950-01 0 2599 0 2599 0 2599 0 2599 #> 2236 TCGA-CK-4951-01 1 2134 0 2134 NA NA 1 480 #> 2237 TCGA-CK-4952-01 0 475 0 475 NA NA 0 475 #> 2238 TCGA-CK-5912-01 1 1493 0 1493 0 1493 0 1493 #> 2239 TCGA-CK-5913-01 0 1561 0 1561 0 1561 0 1561 #> 2240 TCGA-CK-5914-01 0 669 0 669 NA NA 0 669 #> 2241 TCGA-CK-5915-01 0 0 0 0 NA NA 0 0 #> 2242 TCGA-CK-5916-01 1 643 1 643 NA NA 1 292 #> 2243 TCGA-CK-6746-01 0 0 0 0 NA NA 0 0 #> 2244 TCGA-CK-6747-01 0 2523 0 2523 0 2523 0 2523 #> 2245 TCGA-CK-6748-01 0 61 0 61 NA NA 0 61 #> 2246 TCGA-CK-6751-01 0 3780 0 3780 NA NA 0 3780 #> 2247 TCGA-CM-4743-01 0 701 0 701 0 701 0 701 #> 2248 TCGA-CM-4744-01 0 609 0 609 0 609 0 609 #> 2249 TCGA-CM-4747-01 0 761 0 761 NA NA 0 761 #> 2250 TCGA-CM-4751-01 0 822 0 822 0 822 0 822 #> 2251 TCGA-CM-5344-01 0 670 0 670 NA NA 0 670 #> 2252 TCGA-CM-5348-01 0 699 0 699 NA NA 0 699 #> 2253 TCGA-CM-5349-01 0 915 0 915 NA NA 0 915 #> 2254 TCGA-CM-5860-01 0 974 0 974 NA NA 0 974 #> 2255 TCGA-CM-5861-01 0 457 0 457 NA NA 1 335 #> 2256 TCGA-CM-5862-01 1 153 1 153 NA NA 1 31 #> 2257 TCGA-CM-5863-01 0 457 0 457 NA NA 0 457 #> 2258 TCGA-CM-5864-01 0 457 0 457 NA NA 0 457 #> 2259 TCGA-CM-5868-01 0 518 0 518 NA NA 0 518 #> 2260 TCGA-CM-6161-01 0 457 0 457 NA NA 0 457 #> 2261 TCGA-CM-6162-01 0 365 0 365 NA NA 0 365 #> 2262 TCGA-CM-6163-01 0 427 0 427 NA NA 0 427 #> 2263 TCGA-CM-6164-01 0 883 0 883 NA NA 0 883 #> 2264 TCGA-CM-6165-01 0 488 0 488 NA NA 0 488 #> 2265 TCGA-CM-6166-01 0 669 0 669 NA NA 0 669 #> 2266 TCGA-CM-6167-01 0 456 0 456 NA NA 0 456 #> 2267 TCGA-CM-6168-01 0 395 0 395 NA NA 0 395 #> 2268 TCGA-CM-6169-01 0 396 0 396 NA NA 0 396 #> 2269 TCGA-CM-6170-01 0 457 0 457 NA NA 0 457 #> 2270 TCGA-CM-6171-01 0 427 0 427 NA NA 0 427 #> 2271 TCGA-CM-6172-01 0 335 0 335 NA NA 0 335 #> 2272 TCGA-CM-6674-01 0 394 0 394 NA NA 0 394 #> 2273 TCGA-CM-6675-01 0 397 0 397 NA NA 1 337 #> 2274 TCGA-CM-6676-01 0 337 0 337 NA NA 0 337 #> 2275 TCGA-CM-6677-01 0 337 0 337 NA NA 0 337 #> 2276 TCGA-CM-6678-01 0 335 0 335 NA NA 1 0 #> 2277 TCGA-CM-6679-01 0 306 0 306 NA NA 0 306 #> 2278 TCGA-CM-6680-01 0 366 0 366 NA NA 0 366 #> 2279 TCGA-D5-5537-01 1 1381 1 1381 1 722 1 722 #> 2280 TCGA-D5-5538-01 1 1661 1 1661 NA NA 1 1007 #> 2281 TCGA-D5-5539-01 0 596 0 596 NA NA 1 579 #> 2282 TCGA-D5-5540-01 0 1706 0 1706 0 1706 0 1706 #> 2283 TCGA-D5-5541-01 0 1701 0 1701 0 1701 0 1701 #> 2284 TCGA-D5-6529-01 0 614 0 614 NA NA 1 386 #> 2285 TCGA-D5-6530-01 0 621 0 621 NA NA 0 621 #> 2286 TCGA-D5-6531-01 0 540 0 540 NA NA 0 540 #> 2287 TCGA-D5-6532-01 0 555 0 555 NA NA 0 555 #> 2288 TCGA-D5-6533-01 0 775 0 775 0 775 0 775 #> 2289 TCGA-D5-6534-01 0 1316 0 1316 0 1316 0 1316 #> 2290 TCGA-D5-6535-01 0 460 0 460 NA NA 0 460 #> 2291 TCGA-D5-6536-01 0 543 0 543 NA NA 1 493 #> 2292 TCGA-D5-6537-01 1 146 1 146 NA NA 1 123 #> 2293 TCGA-D5-6538-01 0 521 0 521 NA NA 0 521 #> 2294 TCGA-D5-6539-01 0 380 0 380 NA NA 0 380 #> 2295 TCGA-D5-6540-01 0 491 0 491 NA NA 0 491 #> 2296 TCGA-D5-6541-01 0 474 0 474 NA NA 0 474 #> 2297 TCGA-D5-6898-01 0 229 0 229 NA NA 0 229 #> 2298 TCGA-D5-6920-01 0 377 0 377 NA NA 0 377 #> 2299 TCGA-D5-6922-01 0 308 0 308 NA NA 0 308 #> 2300 TCGA-D5-6923-01 0 378 0 378 NA NA 0 378 #> 2301 TCGA-D5-6924-01 0 435 0 435 NA NA 0 435 #> 2302 TCGA-D5-6926-01 0 275 0 275 NA NA 0 275 #> 2303 TCGA-D5-6927-01 0 287 0 287 NA NA 0 287 #> 2304 TCGA-D5-6928-01 0 354 0 354 NA NA 0 354 #> 2305 TCGA-D5-6929-01 0 408 0 408 NA NA 0 408 #> 2306 TCGA-D5-6930-01 0 406 0 406 NA NA 0 406 #> 2307 TCGA-D5-6931-01 0 365 0 365 NA NA 0 365 #> 2308 TCGA-D5-6932-01 0 346 0 346 NA NA 0 346 #> 2309 TCGA-D5-7000-01 0 312 0 312 NA NA 0 312 #> 2310 TCGA-DM-A0X9-01 0 3641 0 3641 NA NA 0 3641 #> 2311 TCGA-DM-A0XD-01 1 743 NA 743 NA NA 1 484 #> 2312 TCGA-DM-A0XF-01 1 1162 NA 1162 NA NA 0 1162 #> 2313 TCGA-DM-A1D0-01 0 3974 0 3974 NA NA 0 3974 #> 2314 TCGA-DM-A1D4-01 1 2821 NA 2821 NA NA 1 1920 #> 2315 TCGA-DM-A1D7-01 1 405 NA 405 NA NA 1 80 #> 2316 TCGA-DM-A1D8-01 1 383 NA 383 NA NA 0 383 #> 2317 TCGA-DM-A1D9-01 0 4270 0 4270 NA NA 0 4270 #> 2318 TCGA-DM-A1DA-01 1 228 NA 228 NA NA 0 228 #> 2319 TCGA-DM-A1DB-01 1 1348 NA 1348 NA NA 0 1348 #> 2320 TCGA-DM-A1HA-01 0 4000 0 4000 NA NA 0 4000 #> 2321 TCGA-DM-A1HB-01 0 4126 0 4126 NA NA 0 4126 #> 2322 TCGA-DM-A280-01 1 236 NA 236 NA NA 0 236 #> 2323 TCGA-DM-A282-01 0 4233 0 4233 NA NA 0 4233 #> 2324 TCGA-DM-A285-01 1 179 NA 179 NA NA 0 179 #> 2325 TCGA-DM-A288-01 1 427 NA 427 NA NA 1 320 #> 2326 TCGA-DM-A28A-01 1 805 NA 805 NA NA 0 805 #> 2327 TCGA-DM-A28C-01 1 2475 NA 2475 NA NA 1 1929 #> 2328 TCGA-DM-A28E-01 0 3648 0 3648 NA NA 0 3648 #> 2329 TCGA-DM-A28F-01 1 1094 NA 1094 NA NA 0 1094 #> 2330 TCGA-DM-A28G-01 1 1849 NA 1849 NA NA 0 1849 #> 2331 TCGA-DM-A28H-01 0 3561 0 3561 NA NA 1 484 #> 2332 TCGA-DM-A28K-01 0 2988 0 2988 NA NA 0 2988 #> 2333 TCGA-DM-A28M-01 0 2895 0 2895 NA NA 0 2895 #> 2334 TCGA-F4-6459-01 1 262 0 262 NA NA 0 262 #> 2335 TCGA-F4-6460-01 1 972 1 972 1 313 1 313 #> 2336 TCGA-F4-6461-01 1 338 1 338 NA NA 1 288 #> 2337 TCGA-F4-6463-01 0 1087 0 1087 0 1087 0 1087 #> 2338 TCGA-F4-6569-01 0 1087 0 1087 0 1087 0 1087 #> 2339 TCGA-F4-6570-01 1 188 0 188 NA NA 0 188 #> 2340 TCGA-F4-6703-01 0 1456 0 1456 0 1456 0 1456 #> 2341 TCGA-F4-6704-01 0 47 0 47 NA NA 0 47 #> 2342 TCGA-F4-6704-11 0 47 0 47 NA NA 0 47 #> 2343 TCGA-F4-6805-01 0 1047 0 1047 0 1047 0 1047 #> 2344 TCGA-F4-6806-01 0 1260 0 1260 1 336 1 336 #> 2345 TCGA-F4-6807-01 0 1309 0 1309 0 1309 0 1309 #> 2346 TCGA-F4-6808-01 0 1024 0 1024 0 1024 0 1024 #> 2347 TCGA-F4-6809-01 1 403 1 403 NA NA 1 403 #> 2348 TCGA-F4-6854-01 0 16 0 16 0 16 0 16 #> 2349 TCGA-F4-6855-01 0 1442 0 1442 0 1442 0 1442 #> 2350 TCGA-F4-6856-01 0 1074 0 1074 0 1074 0 1074 #> 2351 TCGA-G4-6293-01 0 4051 0 4051 0 4051 0 4051 #> 2352 TCGA-G4-6294-01 1 858 1 858 NA NA 1 517 #> 2353 TCGA-G4-6295-01 0 254 0 254 NA NA 0 254 #> 2354 TCGA-G4-6297-01 0 2506 0 2506 NA NA 1 439 #> 2355 TCGA-G4-6298-01 1 715 1 715 NA NA 1 291 #> 2356 TCGA-G4-6299-01 0 2268 0 2268 NA NA 0 2268 #> 2357 TCGA-G4-6302-01 1 2047 0 2047 NA NA 0 2047 #> 2358 TCGA-G4-6303-01 1 2003 1 2003 NA NA 1 872 #> 2359 TCGA-G4-6304-01 0 1631 0 1631 NA NA 1 859 #> 2360 TCGA-G4-6306-01 0 1359 0 1359 NA NA 0 1359 #> 2361 TCGA-G4-6307-01 0 1674 0 1674 NA NA 0 1674 #> 2362 TCGA-G4-6309-01 0 2600 0 2600 1 2176 1 2176 #> 2363 TCGA-G4-6310-01 0 1935 0 1935 0 1935 0 1935 #> 2364 TCGA-G4-6311-01 0 1199 0 1199 NA NA 0 1199 #> 2365 TCGA-G4-6314-01 0 1093 0 1093 NA NA 1 38 #> 2366 TCGA-G4-6315-01 0 1883 0 1883 NA NA 0 1883 #> 2367 TCGA-G4-6317-02 0 1095 0 1095 NA NA 1 592 #> 2368 TCGA-G4-6317-01 0 1095 0 1095 NA NA 1 592 #> 2369 TCGA-G4-6320-01 0 804 0 804 NA NA 0 804 #> 2370 TCGA-G4-6321-01 0 672 0 672 NA NA 0 672 #> 2371 TCGA-G4-6322-01 0 792 0 792 NA NA 1 789 #> 2372 TCGA-G4-6586-01 0 1089 0 1089 NA NA 0 1089 #> 2373 TCGA-G4-6588-01 0 796 0 796 NA NA 0 796 #> 2374 TCGA-G4-6625-01 0 2792 0 2792 NA NA 1 2564 #> 2375 TCGA-G4-6626-01 1 1422 0 1422 NA NA 0 1422 #> 2376 TCGA-G4-6627-01 0 2275 0 2275 1 1003 1 1003 #> 2377 TCGA-G4-6628-01 0 2424 0 2424 0 2424 0 2424 #> 2378 TCGA-NH-A50T-01 0 553 0 553 0 553 0 553 #> 2379 TCGA-NH-A50U-01 1 334 1 334 NA NA 1 276 #> 2380 TCGA-NH-A50V-01 0 588 0 588 0 588 0 588 #> 2381 TCGA-NH-A5IV-01 0 588 0 588 0 588 0 588 #> 2382 TCGA-NH-A6GA-01 1 302 1 302 NA NA 1 6 #> 2383 TCGA-NH-A6GB-01 0 476 0 476 NA NA 0 476 #> 2384 TCGA-NH-A6GC-01 0 389 0 389 NA NA 0 389 #> 2385 TCGA-NH-A8F7-06 0 543 0 543 NA NA 0 543 #> 2386 TCGA-NH-A8F7-01 0 543 0 543 NA NA 0 543 #> 2387 TCGA-NH-A8F8-01 1 511 1 511 NA NA 1 511 #> 2388 TCGA-QG-A5YV-01 0 1301 0 1301 0 1301 0 1301 #> 2389 TCGA-QG-A5YW-01 0 896 0 896 0 896 0 896 #> 2390 TCGA-QG-A5YX-01 0 1003 0 1003 0 1003 0 1003 #> 2391 TCGA-QG-A5Z1-01 1 256 0 256 NA NA 0 256 #> 2392 TCGA-QG-A5Z2-01 0 952 0 952 0 952 0 952 #> 2393 TCGA-QL-A97D-01 0 666 0 666 0 666 0 666 #> 2394 TCGA-RU-A8FL-01 0 1177 0 1177 NA NA 1 256 #> 2395 TCGA-SS-A7HO-01 0 1829 0 1829 1 506 1 506 #> 2396 TCGA-T9-A92H-01 0 362 0 362 1 81 1 81 #> 2397 TCGA-WS-AB45-01 0 2130 0 2130 0 2130 0 2130 #> 2398 TCGA-FA-8693-01 0 132 0 132 0 132 0 132 #> 2399 TCGA-FA-A4BB-01 0 132 0 132 NA NA 0 132 #> 2400 TCGA-FA-A4XK-01 1 708 0 708 0 708 0 708 #> 2401 TCGA-FA-A6HN-01 1 58 0 58 NA NA 0 58 #> 2402 TCGA-FA-A6HO-01 0 749 0 749 1 739 1 739 #> 2403 TCGA-FA-A7DS-01 0 719 0 719 0 719 0 719 #> 2404 TCGA-FA-A7Q1-01 1 248 0 248 0 248 0 248 #> 2405 TCGA-FA-A82F-01 0 427 0 427 0 427 0 427 #> 2406 TCGA-FA-A86F-01 0 553 0 553 NA NA 1 150 #> 2407 TCGA-FF-8041-01 0 1081 0 1081 0 1081 0 1081 #> 2408 TCGA-FF-8042-01 0 946 0 946 0 946 0 946 #> 2409 TCGA-FF-8043-01 0 965 0 965 0 965 0 965 #> 2410 TCGA-FF-8046-01 0 751 0 751 0 751 0 751 #> 2411 TCGA-FF-8047-01 0 126 0 126 NA NA 1 24 #> 2412 TCGA-FF-8061-01 0 832 0 832 0 832 0 832 #> 2413 TCGA-FF-8062-01 0 679 0 679 0 679 0 679 #> 2414 TCGA-FF-A7CQ-01 0 298 0 298 NA NA 1 255 #> 2415 TCGA-FF-A7CR-01 1 313 1 313 NA NA 1 290 #> 2416 TCGA-FF-A7CW-01 0 791 0 791 0 791 0 791 #> 2417 TCGA-FF-A7CX-01 0 385 0 385 NA NA 0 385 #> 2418 TCGA-G8-6324-01 1 1252 1 1252 NA NA 1 338 #> 2419 TCGA-G8-6325-01 0 1581 0 1581 NA NA 0 1581 #> 2420 TCGA-G8-6326-01 0 2131 0 2131 NA NA 0 2131 #> 2421 TCGA-G8-6906-01 1 6425 0 6425 1 6383 1 6383 #> 2422 TCGA-G8-6907-01 1 595 1 595 NA NA 1 279 #> 2423 TCGA-G8-6909-01 1 3553 0 3553 0 3553 0 3553 #> 2424 TCGA-G8-6914-01 0 5980 0 5980 1 3669 1 3669 #> 2425 TCGA-GR-7351-01 0 4578 0 4578 0 4578 0 4578 #> 2426 TCGA-GR-7353-01 0 2983 0 2983 0 2983 0 2983 #> 2427 TCGA-GR-A4D4-01 0 1581 0 1581 NA NA 0 1581 #> 2428 TCGA-GR-A4D5-01 0 1299 0 1299 NA NA 0 1299 #> 2429 TCGA-GR-A4D6-01 0 1334 0 1334 0 1334 0 1334 #> 2430 TCGA-GR-A4D9-01 0 1739 0 1739 NA NA 1 1218 #> 2431 TCGA-GS-A9TQ-01 0 982 0 982 0 982 0 982 #> 2432 TCGA-GS-A9TT-01 0 1163 0 1163 NA NA 0 1163 #> 2433 TCGA-GS-A9TU-01 0 3897 0 3897 0 3897 0 3897 #> 2434 TCGA-GS-A9TV-01 0 730 0 730 0 730 0 730 #> 2435 TCGA-GS-A9TW-01 0 1617 0 1617 0 1617 0 1617 #> 2436 TCGA-GS-A9TX-01 0 1373 0 1373 0 1373 0 1373 #> 2437 TCGA-GS-A9TY-01 0 3333 0 3333 1 3255 1 3255 #> 2438 TCGA-GS-A9TZ-01 0 765 0 765 NA NA 0 765 #> 2439 TCGA-GS-A9U3-01 0 3394 0 3394 0 3394 0 3394 #> 2440 TCGA-GS-A9U4-01 1 391 1 391 NA NA 1 106 #> 2441 TCGA-RQ-A68N-01 0 788 0 788 NA NA 0 788 #> 2442 TCGA-RQ-A6JB-01 0 1 0 1 NA NA 0 1 #> 2443 TCGA-RQ-AAAT-01 0 17 0 17 0 17 0 17 #> 2444 TCGA-VB-A8QN-01 0 0 0 0 NA NA 0 0 #> 2445 TCGA-2H-A9GF-01 1 784 1 784 NA NA 1 172 #> 2446 TCGA-2H-A9GG-01 1 610 1 610 NA NA 1 504 #> 2447 TCGA-2H-A9GH-01 1 951 1 951 NA NA 1 800 #> 2448 TCGA-2H-A9GI-01 1 435 1 435 NA NA 1 400 #> 2449 TCGA-2H-A9GJ-01 1 1781 1 1781 NA NA 1 1261 #> 2450 TCGA-2H-A9GK-01 1 232 1 232 NA NA 1 113 #> 2451 TCGA-2H-A9GL-01 1 180 1 180 NA NA 1 109 #> 2452 TCGA-2H-A9GM-01 1 424 1 424 NA NA 1 367 #> 2453 TCGA-2H-A9GN-01 1 272 1 272 NA NA 1 242 #> 2454 TCGA-2H-A9GO-01 1 494 1 494 NA NA 1 362 #> 2455 TCGA-2H-A9GQ-01 1 128 1 128 NA NA 1 112 #> 2456 TCGA-2H-A9GR-01 1 987 1 987 NA NA 1 987 #> 2457 TCGA-IC-A6RE-01 0 234 0 234 0 234 0 234 #> 2458 TCGA-IC-A6RE-11 0 234 0 234 0 234 0 234 #> 2459 TCGA-IC-A6RF-01 0 477 0 477 1 293 1 293 #> 2460 TCGA-IC-A6RF-11 0 477 0 477 1 293 1 293 #> 2461 TCGA-IG-A3I8-01 0 1012 0 1012 0 1012 0 1012 #> 2462 TCGA-IG-A3I8-11 0 1012 0 1012 0 1012 0 1012 #> 2463 TCGA-IG-A3QL-01 0 1071 0 1071 0 1071 0 1071 #> 2464 TCGA-IG-A3Y9-01 1 26 0 26 0 26 0 26 #> 2465 TCGA-IG-A3YA-01 0 632 0 632 0 632 0 632 #> 2466 TCGA-IG-A3YB-01 0 80 0 80 0 80 0 80 #> 2467 TCGA-IG-A3YC-01 0 612 0 612 NA NA 1 542 #> 2468 TCGA-IG-A4P3-01 1 567 1 567 NA NA 1 567 #> 2469 TCGA-IG-A4QS-01 1 118 0 118 0 118 0 118 #> 2470 TCGA-IG-A4QT-01 1 283 0 283 0 283 0 283 #> 2471 TCGA-IG-A50L-01 0 16 0 16 NA NA 0 16 #> 2472 TCGA-IG-A51D-01 0 518 0 518 NA NA 0 518 #> 2473 TCGA-IG-A5B8-01 1 24 0 24 NA NA 0 24 #> 2474 TCGA-IG-A5S3-01 0 712 0 712 0 712 0 712 #> 2475 TCGA-IG-A625-01 1 390 0 390 NA NA 0 390 #> 2476 TCGA-IG-A6QS-01 1 303 0 303 0 303 0 303 #> 2477 TCGA-IG-A7DP-01 0 452 0 452 0 452 0 452 #> 2478 TCGA-IG-A8O2-01 1 142 0 142 0 142 0 142 #> 2479 TCGA-IG-A97H-01 0 441 0 441 0 441 0 441 #> 2480 TCGA-IG-A97I-01 0 370 0 370 0 370 0 370 #> 2481 TCGA-JY-A6F8-01 0 3714 0 3714 0 3714 0 3714 #> 2482 TCGA-JY-A6FA-01 1 1361 1 1361 NA NA 1 477 #> 2483 TCGA-JY-A6FB-01 0 1837 0 1837 0 1837 0 1837 #> 2484 TCGA-JY-A6FD-01 0 2069 0 2069 0 2069 0 2069 #> 2485 TCGA-JY-A6FE-01 1 112 1 112 NA NA 1 55 #> 2486 TCGA-JY-A6FG-01 1 1263 0 1263 NA NA 0 1263 #> 2487 TCGA-JY-A6FH-01 0 1441 0 1441 NA NA 1 749 #> 2488 TCGA-JY-A938-01 0 1060 0 1060 1 493 1 493 #> 2489 TCGA-JY-A939-01 0 660 0 660 NA NA 0 660 #> 2490 TCGA-JY-A93C-01 0 705 0 705 1 652 1 652 #> 2491 TCGA-JY-A93D-01 1 960 1 960 1 732 1 732 #> 2492 TCGA-JY-A93E-01 0 767 0 767 NA NA 0 767 #> 2493 TCGA-JY-A93F-01 0 731 0 731 0 731 0 731 #> 2494 TCGA-KH-A6WC-01 0 191 0 191 0 191 0 191 #> 2495 TCGA-L5-A43C-01 0 96 0 96 NA NA 0 96 #> 2496 TCGA-L5-A43C-11 0 96 0 96 NA NA 0 96 #> 2497 TCGA-L5-A43E-01 0 920 0 920 0 920 1 885 #> 2498 TCGA-L5-A43H-01 1 9 1 9 NA NA 1 9 #> 2499 TCGA-L5-A43I-01 1 556 0 556 0 556 0 556 #> 2500 TCGA-L5-A43J-01 1 131 1 131 NA NA 1 98 #> 2501 TCGA-L5-A43M-01 0 272 0 272 NA NA 0 272 #> 2502 TCGA-L5-A4OE-01 1 730 NA 730 0 730 0 730 #> 2503 TCGA-L5-A4OF-01 1 801 NA 801 0 801 0 801 #> 2504 TCGA-L5-A4OF-11 1 801 NA 801 0 801 0 801 #> 2505 TCGA-L5-A4OG-01 0 143 0 143 NA NA 0 143 #> 2506 TCGA-L5-A4OG-11 0 143 0 143 NA NA 0 143 #> 2507 TCGA-L5-A4OH-01 0 992 0 992 0 992 0 992 #> 2508 TCGA-L5-A4OI-01 0 608 0 608 NA NA 1 267 #> 2509 TCGA-L5-A4OJ-01 0 639 0 639 0 639 0 639 #> 2510 TCGA-L5-A4OJ-11 0 639 0 639 0 639 0 639 #> 2511 TCGA-L5-A4OM-01 1 1458 0 1458 0 1458 0 1458 #> 2512 TCGA-L5-A4OM-11 1 1458 0 1458 0 1458 0 1458 #> 2513 TCGA-L5-A4ON-01 1 558 0 558 0 558 0 558 #> 2514 TCGA-L5-A4OO-01 0 101 0 101 NA NA 0 101 #> 2515 TCGA-L5-A4OO-11 0 101 0 101 NA NA 0 101 #> 2516 TCGA-L5-A4OP-01 0 218 0 218 NA NA 0 218 #> 2517 TCGA-L5-A4OQ-01 1 42 1 42 NA NA 1 29 #> 2518 TCGA-L5-A4OQ-11 1 42 1 42 NA NA 1 29 #> 2519 TCGA-L5-A4OR-01 1 96 0 96 0 96 0 96 #> 2520 TCGA-L5-A4OR-11 1 96 0 96 0 96 0 96 #> 2521 TCGA-L5-A4OS-01 0 1782 0 1782 NA NA 0 1782 #> 2522 TCGA-L5-A4OT-01 1 149 1 149 NA NA 1 149 #> 2523 TCGA-L5-A4OU-01 0 882 0 882 NA NA 0 882 #> 2524 TCGA-L5-A4OW-01 1 217 0 217 0 217 0 217 #> 2525 TCGA-L5-A4OX-01 1 226 0 226 0 226 0 226 #> 2526 TCGA-L5-A88S-01 0 471 0 471 0 471 0 471 #> 2527 TCGA-L5-A88T-01 0 694 0 694 0 694 0 694 #> 2528 TCGA-L5-A88V-01 0 79 0 79 NA NA 0 79 #> 2529 TCGA-L5-A88W-01 1 764 1 764 NA NA 1 315 #> 2530 TCGA-L5-A88Y-01 0 11 0 11 NA NA 0 11 #> 2531 TCGA-L5-A88Z-01 0 225 0 225 NA NA 0 225 #> 2532 TCGA-L5-A891-01 0 114 0 114 NA NA 0 114 #> 2533 TCGA-L5-A893-01 0 92 0 92 NA NA 0 92 #> 2534 TCGA-L5-A8NE-01 0 1688 0 1688 NA NA 0 1688 #> 2535 TCGA-L5-A8NF-01 1 81 0 81 NA NA 0 81 #> 2536 TCGA-L5-A8NG-01 0 1094 0 1094 NA NA 0 1094 #> 2537 TCGA-L5-A8NH-01 1 393 0 393 NA NA 0 393 #> 2538 TCGA-L5-A8NI-01 1 410 1 410 NA NA 1 401 #> 2539 TCGA-L5-A8NJ-01 0 501 0 501 NA NA 1 396 #> 2540 TCGA-L5-A8NK-01 0 412 0 412 NA NA 1 325 #> 2541 TCGA-L5-A8NL-01 0 402 0 402 NA NA 0 402 #> 2542 TCGA-L5-A8NM-01 1 236 0 236 NA NA 0 236 #> 2543 TCGA-L5-A8NN-01 0 167 0 167 NA NA 0 167 #> 2544 TCGA-L5-A8NQ-01 1 650 1 650 NA NA 1 337 #> 2545 TCGA-L5-A8NR-01 0 265 0 265 NA NA 1 265 #> 2546 TCGA-L5-A8NS-01 0 408 0 408 NA NA 1 300 #> 2547 TCGA-L5-A8NT-01 0 825 0 825 NA NA 1 825 #> 2548 TCGA-L5-A8NU-01 1 2532 0 2532 NA NA 0 2532 #> 2549 TCGA-L5-A8NV-01 1 1599 1 1599 NA NA 1 1252 #> 2550 TCGA-L5-A8NW-01 1 1402 1 1402 NA NA 1 1147 #> 2551 TCGA-L7-A56G-01 1 330 1 330 NA NA 1 270 #> 2552 TCGA-L7-A6VZ-01 0 315 0 315 0 315 0 315 #> 2553 TCGA-LN-A49K-01 1 180 0 180 0 180 0 180 #> 2554 TCGA-LN-A49L-01 1 318 0 318 0 318 0 318 #> 2555 TCGA-LN-A49M-01 0 385 0 385 0 385 0 385 #> 2556 TCGA-LN-A49N-01 0 378 0 378 0 378 0 378 #> 2557 TCGA-LN-A49O-01 0 408 0 408 1 193 1 193 #> 2558 TCGA-LN-A49P-01 0 375 0 375 1 320 1 320 #> 2559 TCGA-LN-A49R-01 0 407 0 407 0 407 0 407 #> 2560 TCGA-LN-A49S-01 0 400 0 400 1 49 1 49 #> 2561 TCGA-LN-A49V-01 0 383 0 383 0 383 0 383 #> 2562 TCGA-LN-A49W-01 0 403 0 403 0 403 0 403 #> 2563 TCGA-LN-A49X-01 0 384 0 384 0 384 0 384 #> 2564 TCGA-LN-A49Y-01 0 379 0 379 1 90 1 90 #> 2565 TCGA-LN-A4A1-01 0 383 0 383 1 205 1 205 #> 2566 TCGA-LN-A4A2-01 0 380 0 380 0 380 0 380 #> 2567 TCGA-LN-A4A3-01 0 388 0 388 0 388 0 388 #> 2568 TCGA-LN-A4A4-01 0 383 0 383 0 383 0 383 #> 2569 TCGA-LN-A4A5-01 1 681 1 681 1 224 1 224 #> 2570 TCGA-LN-A4A6-01 0 391 0 391 1 158 1 158 #> 2571 TCGA-LN-A4A9-01 1 351 1 351 1 274 1 274 #> 2572 TCGA-LN-A4MQ-01 0 375 0 375 1 25 1 25 #> 2573 TCGA-LN-A4MR-01 0 402 0 402 1 226 1 226 #> 2574 TCGA-LN-A5U5-01 1 136 1 136 NA NA 1 136 #> 2575 TCGA-LN-A5U6-01 0 375 0 375 0 375 0 375 #> 2576 TCGA-LN-A5U7-01 0 768 0 768 1 535 1 535 #> 2577 TCGA-LN-A7HV-01 0 320 0 320 0 320 0 320 #> 2578 TCGA-LN-A7HW-01 0 365 0 365 1 97 1 97 #> 2579 TCGA-LN-A7HX-01 0 372 0 372 0 372 0 372 #> 2580 TCGA-LN-A7HY-01 0 366 0 366 1 88 1 88 #> 2581 TCGA-LN-A7HZ-01 0 401 0 401 1 117 1 117 #> 2582 TCGA-LN-A8HZ-01 0 375 0 375 0 375 0 375 #> 2583 TCGA-LN-A8I0-01 0 407 0 407 1 57 1 57 #> 2584 TCGA-LN-A8I1-01 0 401 0 401 0 401 0 401 #> 2585 TCGA-LN-A9FO-01 0 4 0 4 NA NA 0 4 #> 2586 TCGA-LN-A9FP-01 0 366 0 366 1 290 1 290 #> 2587 TCGA-LN-A9FQ-01 0 391 0 391 1 82 1 82 #> 2588 TCGA-LN-A9FR-01 0 373 0 373 0 373 0 373 #> 2589 TCGA-M9-A5M8-01 0 1007 0 1007 0 1007 0 1007 #> 2590 TCGA-Q9-A6FU-01 1 157 1 157 NA NA 1 99 #> 2591 TCGA-Q9-A6FW-01 0 238 0 238 0 238 0 238 #> 2592 TCGA-R6-A6DN-01 1 243 1 243 NA NA 1 199 #> 2593 TCGA-R6-A6DQ-01 1 231 1 231 NA NA 1 231 #> 2594 TCGA-R6-A6KZ-01 1 154 1 154 NA NA 1 154 #> 2595 TCGA-R6-A6L4-01 1 496 1 496 NA NA 1 160 #> 2596 TCGA-R6-A6L6-01 1 214 1 214 NA NA 1 214 #> 2597 TCGA-R6-A6XG-01 0 1168 0 1168 1 572 1 572 #> 2598 TCGA-R6-A6XQ-01 1 193 1 193 NA NA 1 193 #> 2599 TCGA-R6-A6Y0-01 0 1641 0 1641 NA NA 0 1641 #> 2600 TCGA-R6-A6Y2-01 1 283 1 283 NA NA 1 102 #> 2601 TCGA-R6-A8W5-01 1 480 1 480 NA NA 1 336 #> 2602 TCGA-R6-A8W8-01 1 88 1 88 NA NA 1 88 #> 2603 TCGA-R6-A8WC-01 0 70 0 70 NA NA 0 70 #> 2604 TCGA-R6-A8WG-01 1 386 1 386 NA NA 1 107 #> 2605 TCGA-RE-A7BO-01 1 213 0 213 NA NA 0 213 #> 2606 TCGA-S8-A6BV-01 0 609 0 609 NA NA 1 267 #> 2607 TCGA-S8-A6BW-01 0 620 0 620 0 620 0 620 #> 2608 TCGA-V5-A7RB-01 1 161 0 161 NA NA 0 161 #> 2609 TCGA-V5-A7RC-06 1 104 1 104 NA NA 1 88 #> 2610 TCGA-V5-A7RC-01 1 104 1 104 NA NA 1 88 #> 2611 TCGA-V5-A7RE-01 0 500 0 500 NA NA 1 294 #> 2612 TCGA-V5-A7RE-11 0 500 0 500 NA NA 1 294 #> 2613 TCGA-V5-AASV-01 0 467 0 467 NA NA 1 322 #> 2614 TCGA-V5-AASW-01 0 282 0 282 NA NA 1 282 #> 2615 TCGA-V5-AASX-01 0 273 0 273 NA NA 1 273 #> 2616 TCGA-V5-AASX-11 0 273 0 273 NA NA 1 273 #> 2617 TCGA-VR-A8EO-01 0 785 0 785 0 785 0 785 #> 2618 TCGA-VR-A8EP-01 0 824 0 824 NA NA 1 242 #> 2619 TCGA-VR-A8EQ-01 1 694 1 694 NA NA 1 694 #> 2620 TCGA-VR-A8ER-01 1 378 1 378 NA NA 1 378 #> 2621 TCGA-VR-A8ET-01 1 47 0 47 NA NA 0 47 #> 2622 TCGA-VR-A8EU-01 1 557 1 557 NA NA 1 557 #> 2623 TCGA-VR-A8EW-01 1 247 1 247 NA NA 1 247 #> 2624 TCGA-VR-A8EX-01 1 855 1 855 NA NA 1 855 #> 2625 TCGA-VR-A8EY-01 0 1025 0 1025 0 1025 0 1025 #> 2626 TCGA-VR-A8Q7-01 0 1590 0 1590 0 1590 0 1590 #> 2627 TCGA-VR-AA4D-01 1 1405 1 1405 NA NA 1 832 #> 2628 TCGA-VR-AA4G-01 0 549 0 549 0 549 0 549 #> 2629 TCGA-VR-AA7B-01 0 342 0 342 NA NA 1 207 #> 2630 TCGA-VR-AA7D-01 1 279 1 279 NA NA 1 244 #> 2631 TCGA-VR-AA7I-01 1 484 1 484 NA NA 1 484 #> 2632 TCGA-X8-AAAR-01 0 554 0 554 0 554 0 554 #> 2633 TCGA-XP-A8T6-01 1 763 0 763 0 763 0 763 #> 2634 TCGA-XP-A8T8-01 0 437 0 437 0 437 0 437 #> 2635 TCGA-Z6-A8JD-01 0 104 0 104 0 104 0 104 #> 2636 TCGA-Z6-A8JE-01 0 64 0 64 0 64 0 64 #> 2637 TCGA-Z6-A9VB-01 0 40 0 40 0 40 0 40 #> 2638 TCGA-Z6-AAPN-01 0 81 0 81 0 81 0 81 #> 2639 TCGA-ZR-A9CJ-01 1 600 1 600 NA NA 1 163 #> 2640 TCGA-02-0047-01 1 448 1 448 NA NA 1 57 #> 2641 TCGA-02-0055-01 1 76 1 76 NA NA 1 6 #> 2642 TCGA-02-2483-01 0 466 0 466 NA NA 0 466 #> 2643 TCGA-02-2485-01 0 470 0 470 NA NA 1 186 #> 2644 TCGA-06-0125-02 1 1448 1 1448 NA NA 1 797 #> 2645 TCGA-06-0125-01 1 1448 1 1448 NA NA 1 797 #> 2646 TCGA-06-0129-01 1 1024 1 1024 NA NA 1 148 #> 2647 TCGA-06-0130-01 1 394 1 394 NA NA 1 244 #> 2648 TCGA-06-0132-01 1 771 1 771 NA NA 1 482 #> 2649 TCGA-06-0138-01 1 737 1 737 NA NA 1 394 #> 2650 TCGA-06-0139-01 1 362 1 362 NA NA 1 152 #> 2651 TCGA-06-0141-01 1 313 1 313 NA NA 1 145 #> 2652 TCGA-06-0152-02 1 375 1 375 NA NA 1 299 #> 2653 TCGA-06-0156-01 1 178 1 178 NA NA 1 178 #> 2654 TCGA-06-0157-01 1 97 1 97 NA NA 1 97 #> 2655 TCGA-06-0158-01 1 329 1 329 NA NA 1 90 #> 2656 TCGA-06-0168-01 1 598 1 598 NA NA 1 461 #> 2657 TCGA-06-0171-02 1 399 1 399 NA NA 1 117 #> 2658 TCGA-06-0174-01 1 98 1 98 NA NA 1 47 #> 2659 TCGA-06-0178-01 1 2681 1 2681 NA NA 1 192 #> 2660 TCGA-06-0184-01 1 2126 1 2126 NA NA 1 1276 #> 2661 TCGA-06-0187-01 1 828 1 828 NA NA 1 531 #> 2662 TCGA-06-0190-02 1 317 1 317 NA NA 1 88 #> 2663 TCGA-06-0190-01 1 317 1 317 NA NA 1 88 #> 2664 TCGA-06-0210-02 1 225 1 225 NA NA 1 67 #> 2665 TCGA-06-0210-01 1 225 1 225 NA NA 1 67 #> 2666 TCGA-06-0211-02 1 360 1 360 NA NA 1 53 #> 2667 TCGA-06-0211-01 1 360 1 360 NA NA 1 53 #> 2668 TCGA-06-0219-01 1 22 1 22 NA NA 1 22 #> 2669 TCGA-06-0221-02 1 603 1 603 NA NA 1 260 #> 2670 TCGA-06-0238-01 1 405 1 405 NA NA 1 311 #> 2671 TCGA-06-0644-01 1 384 1 384 NA NA 1 85 #> 2672 TCGA-06-0645-01 1 175 1 175 NA NA 1 175 #> 2673 TCGA-06-0646-01 1 175 1 175 NA NA 1 90 #> 2674 TCGA-06-0649-01 1 64 1 64 NA NA 1 64 #> 2675 TCGA-06-0686-01 1 432 1 432 NA NA 1 160 #> 2676 TCGA-06-0743-01 1 803 1 803 NA NA 1 176 #> 2677 TCGA-06-0744-01 1 1426 1 1426 NA NA 1 1277 #> 2678 TCGA-06-0745-01 1 239 1 239 NA NA 1 92 #> 2679 TCGA-06-0747-01 1 82 1 82 NA NA 1 82 #> 2680 TCGA-06-0749-01 1 82 1 82 NA NA 1 82 #> 2681 TCGA-06-0750-01 1 28 1 28 NA NA 1 28 #> 2682 TCGA-06-0878-01 0 218 0 218 NA NA 1 66 #> 2683 TCGA-06-0882-01 1 632 1 632 NA NA 1 213 #> 2684 TCGA-06-1804-01 1 414 1 414 NA NA 1 414 #> 2685 TCGA-06-2557-01 1 33 1 33 NA NA 1 33 #> 2686 TCGA-06-2558-01 1 380 NA 380 NA NA 0 380 #> 2687 TCGA-06-2559-01 1 150 1 150 NA NA 1 150 #> 2688 TCGA-06-2561-01 1 537 1 537 NA NA 1 78 #> 2689 TCGA-06-2562-01 1 382 1 382 NA NA 1 151 #> 2690 TCGA-06-2563-01 0 932 0 932 NA NA 1 554 #> 2691 TCGA-06-2564-01 0 181 0 181 NA NA 0 181 #> 2692 TCGA-06-2565-01 1 506 1 506 NA NA 1 178 #> 2693 TCGA-06-2567-01 1 133 1 133 NA NA 1 133 #> 2694 TCGA-06-2569-01 0 13 0 13 NA NA 0 13 #> 2695 TCGA-06-2570-01 0 958 0 958 NA NA 0 958 #> 2696 TCGA-06-5408-01 1 357 1 357 NA NA 1 158 #> 2697 TCGA-06-5410-01 1 108 1 108 NA NA 1 108 #> 2698 TCGA-06-5411-01 1 254 1 254 NA NA 1 214 #> 2699 TCGA-06-5412-01 1 138 1 138 NA NA 1 88 #> 2700 TCGA-06-5413-01 0 268 0 268 NA NA 1 195 #> 2701 TCGA-06-5414-01 0 273 0 273 NA NA 1 167 #> 2702 TCGA-06-5415-01 0 260 0 260 NA NA 0 260 #> 2703 TCGA-06-5416-01 0 204 0 204 NA NA 0 204 #> 2704 TCGA-06-5417-01 0 155 0 155 NA NA 0 155 #> 2705 TCGA-06-5418-01 1 83 1 83 NA NA 1 83 #> 2706 TCGA-06-5856-01 1 114 1 114 NA NA 1 114 #> 2707 TCGA-06-5858-01 0 187 0 187 NA NA 1 97 #> 2708 TCGA-06-5859-01 0 139 0 139 NA NA 0 139 #> 2709 TCGA-08-0386-01 1 548 1 548 NA NA 1 427 #> 2710 TCGA-12-0616-01 1 448 1 448 NA NA 1 398 #> 2711 TCGA-12-0618-01 1 395 NA 395 NA NA 0 395 #> 2712 TCGA-12-0619-01 1 1062 1 1062 NA NA 1 203 #> 2713 TCGA-12-0821-01 1 323 1 323 NA NA 1 259 #> 2714 TCGA-12-1597-01 1 675 1 675 NA NA 1 180 #> 2715 TCGA-12-3650-01 1 333 1 333 NA NA 1 239 #> 2716 TCGA-12-3652-01 1 1062 1 1062 NA NA 1 203 #> 2717 TCGA-12-3653-01 1 442 1 442 NA NA 1 224 #> 2718 TCGA-12-5295-01 1 454 1 454 NA NA 1 399 #> 2719 TCGA-12-5299-01 1 98 1 98 NA NA 1 98 #> 2720 TCGA-14-0736-02 1 460 1 460 NA NA 1 128 #> 2721 TCGA-14-0781-01 1 29 1 29 NA NA 1 29 #> 2722 TCGA-14-0787-01 1 68 NA 68 NA NA 0 68 #> 2723 TCGA-14-0789-01 1 342 NA 342 NA NA 1 105 #> 2724 TCGA-14-0790-01 1 419 1 419 NA NA 1 419 #> 2725 TCGA-14-0817-01 1 164 NA 164 NA NA 0 164 #> 2726 TCGA-14-0871-01 1 880 NA 880 NA NA 0 880 #> 2727 TCGA-14-1034-02 1 485 1 485 NA NA 1 282 #> 2728 TCGA-14-1034-01 1 485 1 485 NA NA 1 282 #> 2729 TCGA-14-1402-02 1 975 1 975 NA NA 1 333 #> 2730 TCGA-14-1823-01 1 543 1 543 NA NA 1 140 #> 2731 TCGA-14-1825-01 1 232 1 232 NA NA 1 82 #> 2732 TCGA-14-1829-01 0 218 0 218 NA NA 0 218 #> 2733 TCGA-14-2554-01 1 532 1 532 NA NA 1 532 #> 2734 TCGA-15-0742-01 1 419 NA 419 NA NA 1 232 #> 2735 TCGA-15-1444-01 1 1537 1 1537 1 1550 1 1550 #> 2736 TCGA-16-0846-01 1 119 1 119 NA NA 1 119 #> 2737 TCGA-16-1045-01 1 883 1 883 NA NA 1 654 #> 2738 TCGA-19-0957-02 1 666 1 666 NA NA 1 50 #> 2739 TCGA-19-1389-02 1 141 1 141 NA NA 1 81 #> 2740 TCGA-19-1390-01 1 772 NA 772 NA NA 0 772 #> 2741 TCGA-19-1787-01 1 385 1 385 NA NA 1 308 #> 2742 TCGA-19-2619-01 0 294 0 294 NA NA 1 146 #> 2743 TCGA-19-2620-01 1 148 0 148 NA NA 0 148 #> 2744 TCGA-19-2624-01 1 5 0 5 NA NA 0 5 #> 2745 TCGA-19-2625-01 1 124 0 124 NA NA 0 124 #> 2746 TCGA-19-2629-01 1 737 1 737 NA NA 1 145 #> 2747 TCGA-19-4065-02 0 214 0 214 NA NA 1 70 #> 2748 TCGA-19-4065-01 0 214 0 214 NA NA 1 70 #> 2749 TCGA-19-5960-01 1 455 1 455 NA NA 1 382 #> 2750 TCGA-26-1442-01 0 953 0 953 NA NA 0 953 #> 2751 TCGA-26-5132-01 0 286 0 286 NA NA 0 286 #> 2752 TCGA-26-5133-01 0 452 0 452 NA NA 1 370 #> 2753 TCGA-26-5134-01 0 167 0 167 NA NA 0 167 #> 2754 TCGA-26-5135-01 1 270 NA 270 NA NA 0 270 #> 2755 TCGA-26-5136-01 1 577 1 577 NA NA 1 577 #> 2756 TCGA-26-5139-01 0 48 0 48 NA NA 0 48 #> 2757 TCGA-27-1830-01 1 154 1 154 NA NA 1 124 #> 2758 TCGA-27-1831-01 1 505 1 505 NA NA 1 144 #> 2759 TCGA-27-1832-01 1 300 1 300 NA NA 1 176 #> 2760 TCGA-27-1834-01 1 1233 1 1233 NA NA 1 335 #> 2761 TCGA-27-1835-01 1 648 1 648 NA NA 1 157 #> 2762 TCGA-27-1837-01 1 427 1 427 NA NA 1 136 #> 2763 TCGA-27-2519-01 1 550 1 550 NA NA 1 256 #> 2764 TCGA-27-2521-01 1 510 1 510 NA NA 1 510 #> 2765 TCGA-27-2523-01 1 489 1 489 NA NA 1 402 #> 2766 TCGA-27-2524-01 1 231 1 231 NA NA 1 231 #> 2767 TCGA-27-2526-01 1 87 1 87 NA NA 1 87 #> 2768 TCGA-27-2528-01 1 480 1 480 NA NA 1 72 #> 2769 TCGA-28-1747-01 1 77 NA 77 NA NA 0 77 #> 2770 TCGA-28-1753-01 0 37 0 37 NA NA 0 37 #> 2771 TCGA-28-2499-01 0 95 NA 95 NA NA 0 95 #> 2772 TCGA-28-2509-01 0 145 0 145 NA NA 0 145 #> 2773 TCGA-28-2513-01 0 222 0 222 NA NA 1 75 #> 2774 TCGA-28-2514-01 0 160 0 160 NA NA 0 160 #> 2775 TCGA-28-5204-01 1 454 1 454 NA NA 1 454 #> 2776 TCGA-28-5207-01 1 343 1 343 NA NA 1 343 #> 2777 TCGA-28-5208-01 1 544 1 544 NA NA 1 148 #> 2778 TCGA-28-5209-01 0 442 0 442 NA NA 0 442 #> 2779 TCGA-28-5213-01 0 951 0 951 NA NA 0 951 #> 2780 TCGA-28-5215-01 1 335 1 335 NA NA 1 164 #> 2781 TCGA-28-5216-01 0 415 0 415 NA NA 0 415 #> 2782 TCGA-28-5218-01 1 157 NA 157 NA NA 0 157 #> 2783 TCGA-28-5220-01 1 388 1 388 NA NA 1 262 #> 2784 TCGA-32-1970-01 1 468 1 468 NA NA 1 408 #> 2785 TCGA-32-1980-01 1 36 1 36 NA NA 1 36 #> 2786 TCGA-32-1982-01 1 142 1 142 NA NA 1 142 #> 2787 TCGA-32-2615-01 1 485 1 485 NA NA 1 131 #> 2788 TCGA-32-2616-01 1 224 1 224 NA NA 1 182 #> 2789 TCGA-32-2632-01 1 269 1 269 NA NA 1 269 #> 2790 TCGA-32-2634-01 0 693 0 693 NA NA 0 693 #> 2791 TCGA-32-4213-01 0 604 0 604 NA NA 1 353 #> 2792 TCGA-32-5222-01 1 585 1 585 NA NA 1 118 #> 2793 TCGA-41-2571-01 1 26 1 26 NA NA 1 26 #> 2794 TCGA-41-2572-01 1 406 1 406 NA NA 1 122 #> 2795 TCGA-41-3915-01 1 360 1 360 NA NA 1 288 #> 2796 TCGA-41-4097-01 1 6 1 6 NA NA 1 6 #> 2797 TCGA-41-5651-01 1 460 1 460 NA NA 1 210 #> 2798 TCGA-76-4925-01 1 146 NA 146 NA NA 1 88 #> 2799 TCGA-76-4926-01 1 138 1 138 NA NA 1 34 #> 2800 TCGA-76-4927-01 1 535 1 535 NA NA 1 416 #> 2801 TCGA-76-4928-01 1 94 1 94 NA NA 1 94 #> 2802 TCGA-76-4929-01 1 111 1 111 NA NA 1 111 #> 2803 TCGA-76-4931-01 1 279 1 279 NA NA 1 112 #> 2804 TCGA-76-4932-01 1 1458 1 1458 NA NA 1 1458 #> 2805 TCGA-4P-AA8J-01 0 102 0 102 NA NA 0 102 #> 2806 TCGA-BA-4074-01 1 462 1 462 NA NA 1 396 #> 2807 TCGA-BA-4075-01 1 283 1 283 NA NA 1 236 #> 2808 TCGA-BA-4076-01 1 415 1 415 NA NA 1 286 #> 2809 TCGA-BA-4077-01 1 1134 1 1134 NA NA 1 1134 #> 2810 TCGA-BA-4078-01 1 276 1 276 NA NA 1 276 #> 2811 TCGA-BA-5149-01 1 806 1 806 NA NA 1 389 #> 2812 TCGA-BA-5151-01 0 722 0 722 NA NA 1 517 #> 2813 TCGA-BA-5152-01 0 1288 0 1288 NA NA 0 1288 #> 2814 TCGA-BA-5153-01 1 1762 1 1762 1 1522 1 1522 #> 2815 TCGA-BA-5555-01 0 520 0 520 NA NA 1 248 #> 2816 TCGA-BA-5556-01 0 725 0 725 0 725 0 725 #> 2817 TCGA-BA-5557-01 0 623 0 623 NA NA 0 623 #> 2818 TCGA-BA-5558-01 0 1995 0 1995 NA NA 0 1995 #> 2819 TCGA-BA-5559-01 1 2083 1 2083 NA NA 1 1614 #> 2820 TCGA-BA-6868-01 1 472 1 472 NA NA 1 344 #> 2821 TCGA-BA-6869-01 0 644 0 644 0 644 0 644 #> 2822 TCGA-BA-6870-01 1 451 NA 451 NA NA 0 451 #> 2823 TCGA-BA-6871-01 1 108 1 108 NA NA 1 108 #> 2824 TCGA-BA-6872-01 1 384 1 384 NA NA 1 384 #> 2825 TCGA-BA-6873-01 0 122 0 122 NA NA 1 66 #> 2826 TCGA-BA-7269-01 0 1273 0 1273 0 1273 0 1273 #> 2827 TCGA-BA-A4IF-01 0 895 0 895 NA NA 1 463 #> 2828 TCGA-BA-A4IG-01 0 855 0 855 NA NA 0 855 #> 2829 TCGA-BA-A4IH-01 0 622 0 622 NA NA 0 622 #> 2830 TCGA-BA-A4II-01 0 918 0 918 1 197 1 197 #> 2831 TCGA-BA-A6D8-01 0 850 0 850 NA NA 1 849 #> 2832 TCGA-BA-A6DA-01 0 351 0 351 NA NA 0 351 #> 2833 TCGA-BA-A6DB-01 0 216 0 216 1 208 1 208 #> 2834 TCGA-BA-A6DD-01 1 173 1 173 NA NA 1 96 #> 2835 TCGA-BA-A6DE-01 0 440 0 440 0 440 0 440 #> 2836 TCGA-BA-A6DG-01 1 69 1 69 NA NA 1 69 #> 2837 TCGA-BA-A6DI-01 1 336 1 336 1 266 1 266 #> 2838 TCGA-BA-A6DJ-01 1 407 1 407 NA NA 1 240 #> 2839 TCGA-BA-A6DL-01 0 623 0 623 0 623 0 623 #> 2840 TCGA-BA-A8YP-01 0 499 0 499 NA NA 0 499 #> 2841 TCGA-BB-4217-01 0 187 0 187 NA NA 0 187 #> 2842 TCGA-BB-4223-01 0 3221 0 3221 NA NA 0 3221 #> 2843 TCGA-BB-4224-01 0 278 0 278 NA NA 1 175 #> 2844 TCGA-BB-4225-01 0 146 0 146 NA NA 0 146 #> 2845 TCGA-BB-4227-01 0 134 0 134 NA NA 1 85 #> 2846 TCGA-BB-4228-01 0 559 0 559 0 559 0 559 #> 2847 TCGA-BB-7861-01 0 682 0 682 0 682 0 682 #> 2848 TCGA-BB-7862-01 0 1117 0 1117 NA NA 0 1117 #> 2849 TCGA-BB-7863-01 0 1025 0 1025 0 1025 0 1025 #> 2850 TCGA-BB-7864-01 0 1527 0 1527 NA NA 0 1527 #> 2851 TCGA-BB-7866-01 0 1368 0 1368 0 1368 0 1368 #> 2852 TCGA-BB-7870-01 0 2016 0 2016 NA NA 0 2016 #> 2853 TCGA-BB-7871-01 0 750 0 750 NA NA 1 428 #> 2854 TCGA-BB-7872-01 0 1168 0 1168 NA NA 0 1168 #> 2855 TCGA-BB-8596-01 0 2161 0 2161 NA NA 0 2161 #> 2856 TCGA-BB-8601-01 0 624 0 624 NA NA 1 440 #> 2857 TCGA-BB-A5HU-01 0 782 0 782 NA NA 0 782 #> 2858 TCGA-BB-A5HY-01 1 321 1 321 NA NA 1 230 #> 2859 TCGA-BB-A5HZ-01 0 827 0 827 NA NA 1 438 #> 2860 TCGA-BB-A6UM-01 0 393 0 393 0 393 0 393 #> 2861 TCGA-BB-A6UO-01 1 268 1 268 NA NA 1 212 #> 2862 TCGA-C9-A47Z-01 1 191 0 191 0 191 0 191 #> 2863 TCGA-C9-A480-01 0 386 0 386 0 386 0 386 #> 2864 TCGA-CN-4722-01 0 1483 0 1483 0 1483 0 1483 #> 2865 TCGA-CN-4723-01 0 1699 0 1699 NA NA 0 1699 #> 2866 TCGA-CN-4725-01 0 1157 0 1157 0 1157 0 1157 #> 2867 TCGA-CN-4726-01 1 142 1 142 NA NA 1 79 #> 2868 TCGA-CN-4727-01 0 1560 0 1560 NA NA 0 1560 #> 2869 TCGA-CN-4728-01 0 1724 0 1724 NA NA 0 1724 #> 2870 TCGA-CN-4729-01 0 392 0 392 NA NA 0 392 #> 2871 TCGA-CN-4730-01 0 817 0 817 NA NA 0 817 #> 2872 TCGA-CN-4731-01 1 998 1 998 NA NA 1 243 #> 2873 TCGA-CN-4733-01 0 1586 0 1586 0 1586 0 1586 #> 2874 TCGA-CN-4734-01 0 1690 0 1690 0 1690 0 1690 #> 2875 TCGA-CN-4735-01 0 1737 0 1737 NA NA 0 1737 #> 2876 TCGA-CN-4736-01 1 395 1 395 1 209 1 209 #> 2877 TCGA-CN-4737-01 0 625 0 625 NA NA 0 625 #> 2878 TCGA-CN-4738-01 1 436 NA 436 NA NA 0 436 #> 2879 TCGA-CN-4739-01 1 1394 1 1394 NA NA 1 1302 #> 2880 TCGA-CN-4740-01 1 839 1 839 NA NA 1 224 #> 2881 TCGA-CN-4741-01 0 2239 0 2239 NA NA 1 1716 #> 2882 TCGA-CN-4742-01 1 397 1 397 NA NA 1 397 #> 2883 TCGA-CN-5355-01 0 1278 0 1278 NA NA 0 1278 #> 2884 TCGA-CN-5356-01 0 1409 0 1409 0 1409 0 1409 #> 2885 TCGA-CN-5358-01 1 261 0 261 1 145 1 145 #> 2886 TCGA-CN-5359-01 1 377 1 377 NA NA 1 356 #> 2887 TCGA-CN-5360-01 0 2169 0 2169 NA NA 0 2169 #> 2888 TCGA-CN-5361-01 1 2120 0 2120 NA NA 1 2062 #> 2889 TCGA-CN-5363-01 1 253 1 253 NA NA 1 53 #> 2890 TCGA-CN-5364-01 1 493 0 493 NA NA 0 493 #> 2891 TCGA-CN-5365-01 1 351 1 351 NA NA 1 351 #> 2892 TCGA-CN-5366-01 1 360 1 360 NA NA 1 276 #> 2893 TCGA-CN-5367-01 1 352 0 352 NA NA 0 352 #> 2894 TCGA-CN-5369-01 1 380 0 380 NA NA 0 380 #> 2895 TCGA-CN-5370-01 1 259 1 259 1 123 1 123 #> 2896 TCGA-CN-5373-01 0 1584 0 1584 0 1584 0 1584 #> 2897 TCGA-CN-5374-01 1 1732 0 1732 NA NA 1 1369 #> 2898 TCGA-CN-6010-01 0 1523 0 1523 NA NA 1 540 #> 2899 TCGA-CN-6011-01 0 933 0 933 NA NA 0 933 #> 2900 TCGA-CN-6012-01 0 1460 0 1460 NA NA 0 1460 #> 2901 TCGA-CN-6013-01 1 727 1 727 NA NA 1 323 #> 2902 TCGA-CN-6016-01 0 1443 0 1443 NA NA 0 1443 #> 2903 TCGA-CN-6017-01 1 853 0 853 NA NA 0 853 #> 2904 TCGA-CN-6018-01 1 580 0 580 NA NA 0 580 #> 2905 TCGA-CN-6019-01 0 1038 0 1038 NA NA 0 1038 #> 2906 TCGA-CN-6020-01 1 205 0 205 NA NA 0 205 #> 2907 TCGA-CN-6021-01 1 276 1 276 NA NA 1 276 #> 2908 TCGA-CN-6022-01 1 281 1 281 NA NA 1 101 #> 2909 TCGA-CN-6023-01 0 1584 0 1584 NA NA 0 1584 #> 2910 TCGA-CN-6024-01 1 337 1 337 NA NA 1 156 #> 2911 TCGA-CN-6988-01 0 318 0 318 NA NA 0 318 #> 2912 TCGA-CN-6989-01 1 980 1 980 NA NA 1 436 #> 2913 TCGA-CN-6992-01 0 1066 0 1066 NA NA 0 1066 #> 2914 TCGA-CN-6994-01 0 1183 0 1183 NA NA 0 1183 #> 2915 TCGA-CN-6995-01 1 112 0 112 NA NA 0 112 #> 2916 TCGA-CN-6996-01 1 530 1 530 NA NA 1 350 #> 2917 TCGA-CN-6997-01 1 988 0 988 NA NA 1 279 #> 2918 TCGA-CN-6998-01 1 357 1 357 NA NA 1 244 #> 2919 TCGA-CN-A497-01 0 1065 0 1065 NA NA 0 1065 #> 2920 TCGA-CN-A498-01 1 773 1 773 1 186 1 186 #> 2921 TCGA-CN-A499-01 0 717 0 717 0 717 0 717 #> 2922 TCGA-CN-A49A-01 1 526 1 526 NA NA 1 344 #> 2923 TCGA-CN-A49B-01 0 904 0 904 0 904 0 904 #> 2924 TCGA-CN-A49C-01 0 645 0 645 NA NA 0 645 #> 2925 TCGA-CN-A63T-01 0 225 0 225 NA NA 0 225 #> 2926 TCGA-CN-A63U-01 0 964 0 964 NA NA 0 964 #> 2927 TCGA-CN-A63V-01 0 679 0 679 NA NA 0 679 #> 2928 TCGA-CN-A63W-01 1 377 0 377 NA NA 0 377 #> 2929 TCGA-CN-A641-01 0 367 0 367 NA NA 0 367 #> 2930 TCGA-CN-A642-01 1 82 1 82 NA NA 1 82 #> 2931 TCGA-CN-A6UY-01 0 713 0 713 NA NA 0 713 #> 2932 TCGA-CN-A6V1-01 0 603 0 603 NA NA 0 603 #> 2933 TCGA-CN-A6V3-01 0 742 0 742 NA NA 0 742 #> 2934 TCGA-CN-A6V6-01 0 635 0 635 NA NA 0 635 #> 2935 TCGA-CN-A6V7-01 0 594 0 594 NA NA 0 594 #> 2936 TCGA-CQ-5323-01 0 1466 0 1466 0 1466 0 1466 #> 2937 TCGA-CQ-5324-01 0 1593 0 1593 NA NA 0 1593 #> 2938 TCGA-CQ-5325-01 1 654 1 654 1 204 1 204 #> 2939 TCGA-CQ-5326-01 1 89 1 89 NA NA 1 89 #> 2940 TCGA-CQ-5327-01 0 1660 0 1660 NA NA 0 1660 #> 2941 TCGA-CQ-5329-01 0 2143 0 2143 0 2143 0 2143 #> 2942 TCGA-CQ-5330-01 0 1897 0 1897 NA NA 0 1897 #> 2943 TCGA-CQ-5331-01 0 1399 0 1399 NA NA 0 1399 #> 2944 TCGA-CQ-5332-01 1 317 NA 317 NA NA 0 317 #> 2945 TCGA-CQ-5333-01 1 341 1 341 1 176 1 176 #> 2946 TCGA-CQ-5334-01 1 129 1 129 NA NA 1 50 #> 2947 TCGA-CQ-6218-01 0 1253 0 1253 NA NA 0 1253 #> 2948 TCGA-CQ-6219-01 1 479 1 479 NA NA 1 195 #> 2949 TCGA-CQ-6220-01 1 985 NA 985 0 985 0 985 #> 2950 TCGA-CQ-6221-01 0 1000 0 1000 0 1000 0 1000 #> 2951 TCGA-CQ-6222-01 0 2016 0 2016 NA NA 0 2016 #> 2952 TCGA-CQ-6223-01 0 1428 0 1428 NA NA 0 1428 #> 2953 TCGA-CQ-6224-01 0 1721 0 1721 NA NA 0 1721 #> 2954 TCGA-CQ-6225-01 1 403 NA 403 NA NA 1 180 #> 2955 TCGA-CQ-6227-01 1 129 1 129 NA NA 1 129 #> 2956 TCGA-CQ-6228-01 1 456 NA 456 NA NA 1 273 #> 2957 TCGA-CQ-6229-01 0 1179 0 1179 0 1179 0 1179 #> 2958 TCGA-CQ-7063-01 0 2133 0 2133 1 1160 1 1160 #> 2959 TCGA-CQ-7065-01 0 1628 0 1628 1 230 1 230 #> 2960 TCGA-CQ-7067-01 0 509 0 509 0 509 0 509 #> 2961 TCGA-CQ-7068-01 0 1309 0 1309 0 1309 1 1148 #> 2962 TCGA-CQ-7069-01 0 1274 0 1274 0 1274 0 1274 #> 2963 TCGA-CQ-7071-01 0 1311 0 1311 NA NA 0 1311 #> 2964 TCGA-CQ-7072-01 0 2359 0 2359 NA NA 0 2359 #> 2965 TCGA-CQ-A4C6-01 0 1353 0 1353 0 1353 0 1353 #> 2966 TCGA-CQ-A4C7-01 1 353 NA 353 1 207 1 207 #> 2967 TCGA-CQ-A4C9-01 0 707 0 707 1 287 1 287 #> 2968 TCGA-CQ-A4CA-01 0 NA 0 NA 0 NA 0 NA #> 2969 TCGA-CQ-A4CB-01 0 893 0 893 0 893 0 893 #> 2970 TCGA-CQ-A4CD-01 0 1022 0 1022 NA NA 0 1022 #> 2971 TCGA-CQ-A4CE-01 0 897 0 897 0 897 0 897 #> 2972 TCGA-CQ-A4CG-01 1 430 1 430 1 350 1 350 #> 2973 TCGA-CQ-A4CH-01 1 379 1 379 NA NA 1 210 #> 2974 TCGA-CQ-A4CI-01 0 950 0 950 1 517 1 517 #> 2975 TCGA-CR-5243-01 0 2562 0 2562 NA NA 0 2562 #> 2976 TCGA-CR-5247-01 0 358 0 358 0 358 0 358 #> 2977 TCGA-CR-5248-01 0 1663 0 1663 NA NA 1 936 #> 2978 TCGA-CR-5249-01 0 1152 0 1152 0 1152 0 1152 #> 2979 TCGA-CR-5250-01 0 799 0 799 0 799 0 799 #> 2980 TCGA-CR-6467-01 0 1777 0 1777 NA NA 0 1777 #> 2981 TCGA-CR-6470-01 0 1521 0 1521 NA NA 0 1521 #> 2982 TCGA-CR-6471-01 1 1202 1 1202 NA NA 1 498 #> 2983 TCGA-CR-6472-01 0 1050 0 1050 NA NA 0 1050 #> 2984 TCGA-CR-6473-01 0 1125 0 1125 NA NA 0 1125 #> 2985 TCGA-CR-6474-01 1 564 1 564 NA NA 1 220 #> 2986 TCGA-CR-6477-01 0 514 0 514 NA NA 0 514 #> 2987 TCGA-CR-6478-01 1 183 NA 183 NA NA 0 183 #> 2988 TCGA-CR-6480-01 0 362 0 362 NA NA 0 362 #> 2989 TCGA-CR-6481-01 0 311 0 311 NA NA 0 311 #> 2990 TCGA-CR-6482-01 0 345 0 345 NA NA 0 345 #> 2991 TCGA-CR-6484-01 0 354 0 354 NA NA 0 354 #> 2992 TCGA-CR-6487-01 0 234 0 234 0 234 0 234 #> 2993 TCGA-CR-6488-01 0 379 0 379 0 379 0 379 #> 2994 TCGA-CR-6491-01 0 693 0 693 NA NA 1 499 #> 2995 TCGA-CR-6492-01 0 479 0 479 NA NA 0 479 #> 2996 TCGA-CR-6493-01 1 282 1 282 NA NA 1 247 #> 2997 TCGA-CR-7364-01 0 1435 0 1435 0 1435 0 1435 #> 2998 TCGA-CR-7365-01 0 1191 0 1191 NA NA 0 1191 #> 2999 TCGA-CR-7367-01 0 1440 0 1440 NA NA 0 1440 #> 3000 TCGA-CR-7368-01 0 1245 0 1245 NA NA 0 1245 #> 3001 TCGA-CR-7369-01 1 1090 0 1090 NA NA 0 1090 #> 3002 TCGA-CR-7370-01 0 105 0 105 0 105 0 105 #> 3003 TCGA-CR-7371-01 1 94 NA 94 NA NA 0 94 #> 3004 TCGA-CR-7372-01 0 759 0 759 0 759 0 759 #> 3005 TCGA-CR-7373-01 0 889 0 889 NA NA 0 889 #> 3006 TCGA-CR-7374-01 0 30 0 30 NA NA 0 30 #> 3007 TCGA-CR-7376-01 0 972 0 972 0 972 0 972 #> 3008 TCGA-CR-7377-01 1 279 NA 279 NA NA 0 279 #> 3009 TCGA-CR-7379-01 0 1036 0 1036 NA NA 0 1036 #> 3010 TCGA-CR-7380-01 1 606 1 606 NA NA 1 561 #> 3011 TCGA-CR-7382-01 0 796 0 796 NA NA 1 614 #> 3012 TCGA-CR-7383-01 1 521 1 521 1 454 1 454 #> 3013 TCGA-CR-7385-01 0 997 0 997 NA NA 0 997 #> 3014 TCGA-CR-7386-01 0 1430 0 1430 NA NA 1 1028 #> 3015 TCGA-CR-7388-01 1 823 1 823 NA NA 1 334 #> 3016 TCGA-CR-7389-01 0 392 0 392 0 392 0 392 #> 3017 TCGA-CR-7390-01 0 1508 0 1508 NA NA 0 1508 #> 3018 TCGA-CR-7391-01 0 913 0 913 0 913 0 913 #> 3019 TCGA-CR-7392-01 0 1425 0 1425 NA NA 0 1425 #> 3020 TCGA-CR-7393-01 0 993 0 993 0 993 0 993 #> 3021 TCGA-CR-7394-01 0 1346 0 1346 NA NA 0 1346 #> 3022 TCGA-CR-7395-01 0 930 0 930 0 930 0 930 #> 3023 TCGA-CR-7397-01 0 754 0 754 NA NA 0 754 #> 3024 TCGA-CR-7398-01 0 156 0 156 0 156 0 156 #> 3025 TCGA-CR-7399-01 0 181 0 181 NA NA 0 181 #> 3026 TCGA-CR-7401-01 0 1077 0 1077 0 1077 0 1077 #> 3027 TCGA-CR-7402-01 0 911 0 911 0 911 0 911 #> 3028 TCGA-CR-7404-01 0 1472 0 1472 NA NA 1 234 #> 3029 TCGA-CV-5430-01 0 4241 0 4241 NA NA 1 783 #> 3030 TCGA-CV-5431-01 1 522 0 522 NA NA 0 522 #> 3031 TCGA-CV-5432-01 0 3930 0 3930 NA NA 0 3930 #> 3032 TCGA-CV-5434-01 1 3314 0 3314 NA NA 1 1859 #> 3033 TCGA-CV-5435-01 1 2319 1 2319 NA NA 1 284 #> 3034 TCGA-CV-5436-01 1 584 1 584 NA NA 1 584 #> 3035 TCGA-CV-5439-01 1 546 1 546 NA NA 1 211 #> 3036 TCGA-CV-5440-01 0 3270 0 3270 NA NA 0 3270 #> 3037 TCGA-CV-5441-01 0 2886 0 2886 NA NA 0 2886 #> 3038 TCGA-CV-5442-01 0 2327 0 2327 NA NA 0 2327 #> 3039 TCGA-CV-5443-01 0 2784 0 2784 NA NA 0 2784 #> 3040 TCGA-CV-5444-01 0 2437 0 2437 NA NA 0 2437 #> 3041 TCGA-CV-5966-01 1 545 0 545 NA NA 0 545 #> 3042 TCGA-CV-5970-01 1 406 1 406 NA NA 1 406 #> 3043 TCGA-CV-5971-01 0 701 0 701 NA NA 0 701 #> 3044 TCGA-CV-5973-01 0 2641 0 2641 0 2641 0 2641 #> 3045 TCGA-CV-5976-01 0 1478 0 1478 NA NA 0 1478 #> 3046 TCGA-CV-5977-01 0 1840 0 1840 NA NA 0 1840 #> 3047 TCGA-CV-5978-01 1 215 1 215 NA NA 1 215 #> 3048 TCGA-CV-5979-01 0 1315 0 1315 NA NA 0 1315 #> 3049 TCGA-CV-6003-01 0 1665 0 1665 NA NA 0 1665 #> 3050 TCGA-CV-6436-01 0 1899 0 1899 NA NA 0 1899 #> 3051 TCGA-CV-6441-01 1 292 1 292 NA NA 1 95 #> 3052 TCGA-CV-6933-01 1 2741 0 2741 NA NA 0 2741 #> 3053 TCGA-CV-6933-11 1 2741 0 2741 NA NA 0 2741 #> 3054 TCGA-CV-6934-01 1 65 1 65 NA NA 1 65 #> 3055 TCGA-CV-6934-11 1 65 1 65 NA NA 1 65 #> 3056 TCGA-CV-6935-01 1 295 1 295 NA NA 1 295 #> 3057 TCGA-CV-6935-11 1 295 1 295 NA NA 1 295 #> 3058 TCGA-CV-6936-01 1 166 1 166 NA NA 1 157 #> 3059 TCGA-CV-6936-11 1 166 1 166 NA NA 1 157 #> 3060 TCGA-CV-6937-01 1 624 0 624 NA NA 0 624 #> 3061 TCGA-CV-6938-01 1 144 0 144 NA NA 0 144 #> 3062 TCGA-CV-6938-11 1 144 0 144 NA NA 0 144 #> 3063 TCGA-CV-6939-01 1 666 1 666 NA NA 1 666 #> 3064 TCGA-CV-6939-11 1 666 1 666 NA NA 1 666 #> 3065 TCGA-CV-6940-01 1 804 0 804 0 804 0 804 #> 3066 TCGA-CV-6941-01 1 342 0 342 0 342 0 342 #> 3067 TCGA-CV-6942-01 0 4282 0 4282 0 4282 0 4282 #> 3068 TCGA-CV-6943-01 1 602 1 602 NA NA 1 602 #> 3069 TCGA-CV-6943-11 1 602 1 602 NA NA 1 602 #> 3070 TCGA-CV-6945-01 1 366 1 366 NA NA 1 366 #> 3071 TCGA-CV-6948-01 1 1289 0 1289 NA NA 0 1289 #> 3072 TCGA-CV-6950-01 1 459 1 459 NA NA 1 258 #> 3073 TCGA-CV-6951-01 1 915 1 915 NA NA 1 915 #> 3074 TCGA-CV-6952-01 1 185 0 185 NA NA 0 185 #> 3075 TCGA-CV-6953-01 1 1641 1 1641 1 1521 1 1521 #> 3076 TCGA-CV-6954-01 1 2002 0 2002 NA NA 0 2002 #> 3077 TCGA-CV-6955-01 1 334 1 334 NA NA 1 334 #> 3078 TCGA-CV-6955-11 1 334 1 334 NA NA 1 334 #> 3079 TCGA-CV-6956-01 1 217 1 217 NA NA 1 217 #> 3080 TCGA-CV-6956-11 1 217 1 217 NA NA 1 217 #> 3081 TCGA-CV-6959-01 1 256 1 256 NA NA 1 103 #> 3082 TCGA-CV-6959-11 1 256 1 256 NA NA 1 103 #> 3083 TCGA-CV-6960-01 1 862 0 862 NA NA 0 862 #> 3084 TCGA-CV-6960-11 1 862 0 862 NA NA 0 862 #> 3085 TCGA-CV-6961-01 1 76 1 76 NA NA 1 76 #> 3086 TCGA-CV-6961-11 1 76 1 76 NA NA 1 76 #> 3087 TCGA-CV-6962-01 1 126 0 126 NA NA 0 126 #> 3088 TCGA-CV-6962-11 1 126 0 126 NA NA 0 126 #> 3089 TCGA-CV-7089-01 1 1972 0 1972 NA NA 0 1972 #> 3090 TCGA-CV-7090-01 0 5252 0 5252 0 5252 0 5252 #> 3091 TCGA-CV-7091-01 0 3381 0 3381 NA NA 0 3381 #> 3092 TCGA-CV-7091-11 0 3381 0 3381 NA NA 0 3381 #> 3093 TCGA-CV-7095-01 1 572 0 572 NA NA 0 572 #> 3094 TCGA-CV-7097-01 1 385 1 385 NA NA 1 385 #> 3095 TCGA-CV-7097-11 1 385 1 385 NA NA 1 385 #> 3096 TCGA-CV-7099-01 1 243 0 243 0 243 0 243 #> 3097 TCGA-CV-7100-01 1 274 1 274 NA NA 1 274 #> 3098 TCGA-CV-7101-01 1 160 0 160 NA NA 0 160 #> 3099 TCGA-CV-7101-11 1 160 0 160 NA NA 0 160 #> 3100 TCGA-CV-7102-01 1 56 NA 56 NA NA 0 56 #> 3101 TCGA-CV-7103-01 1 1591 1 1591 NA NA 1 1591 #> 3102 TCGA-CV-7103-11 1 1591 1 1591 NA NA 1 1591 #> 3103 TCGA-CV-7104-01 1 393 0 393 NA NA 0 393 #> 3104 TCGA-CV-7177-01 1 663 1 663 NA NA 1 663 #> 3105 TCGA-CV-7177-11 1 663 1 663 NA NA 1 663 #> 3106 TCGA-CV-7178-01 1 2166 1 2166 NA NA 1 2166 #> 3107 TCGA-CV-7178-11 1 2166 1 2166 NA NA 1 2166 #> 3108 TCGA-CV-7180-01 1 327 1 327 NA NA 1 327 #> 3109 TCGA-CV-7183-01 0 3981 0 3981 0 3981 0 3981 #> 3110 TCGA-CV-7183-11 0 3981 0 3981 0 3981 0 3981 #> 3111 TCGA-CV-7235-01 0 2347 0 2347 0 2347 0 2347 #> 3112 TCGA-CV-7235-11 0 2347 0 2347 0 2347 0 2347 #> 3113 TCGA-CV-7236-01 1 144 0 144 NA NA 0 144 #> 3114 TCGA-CV-7238-01 0 2727 0 2727 0 2727 0 2727 #> 3115 TCGA-CV-7238-11 0 2727 0 2727 0 2727 0 2727 #> 3116 TCGA-CV-7242-01 0 1095 0 1095 NA NA 0 1095 #> 3117 TCGA-CV-7242-11 0 1095 0 1095 NA NA 0 1095 #> 3118 TCGA-CV-7243-01 0 954 0 954 NA NA 0 954 #> 3119 TCGA-CV-7245-01 0 797 0 797 NA NA 0 797 #> 3120 TCGA-CV-7245-11 0 797 0 797 NA NA 0 797 #> 3121 TCGA-CV-7247-01 1 577 1 577 NA NA 1 577 #> 3122 TCGA-CV-7248-01 1 521 0 521 NA NA 0 521 #> 3123 TCGA-CV-7250-01 1 2900 0 2900 NA NA 1 111 #> 3124 TCGA-CV-7250-11 1 2900 0 2900 NA NA 1 111 #> 3125 TCGA-CV-7252-01 1 151 1 151 NA NA 1 151 #> 3126 TCGA-CV-7252-11 1 151 1 151 NA NA 1 151 #> 3127 TCGA-CV-7253-01 1 361 1 361 NA NA 1 361 #> 3128 TCGA-CV-7254-01 1 1459 1 1459 NA NA 1 1459 #> 3129 TCGA-CV-7255-01 1 64 1 64 NA NA 1 64 #> 3130 TCGA-CV-7255-11 1 64 1 64 NA NA 1 64 #> 3131 TCGA-CV-7261-01 0 1512 0 1512 NA NA 0 1512 #> 3132 TCGA-CV-7261-11 0 1512 0 1512 NA NA 0 1512 #> 3133 TCGA-CV-7263-01 1 560 1 560 NA NA 1 560 #> 3134 TCGA-CV-7406-01 1 1748 NA 1748 NA NA 0 1748 #> 3135 TCGA-CV-7406-11 1 1748 NA 1748 NA NA 0 1748 #> 3136 TCGA-CV-7407-01 1 1081 NA 1081 NA NA 0 1081 #> 3137 TCGA-CV-7409-01 1 543 NA 543 NA NA 0 543 #> 3138 TCGA-CV-7410-01 1 6417 1 6417 NA NA 1 6417 #> 3139 TCGA-CV-7411-01 1 2717 NA 2717 NA NA 0 2717 #> 3140 TCGA-CV-7413-01 1 294 NA 294 0 294 0 294 #> 3141 TCGA-CV-7414-01 1 14 NA 14 NA NA 0 14 #> 3142 TCGA-CV-7415-01 1 695 1 695 NA NA 1 695 #> 3143 TCGA-CV-7416-01 1 763 NA 763 NA NA 0 763 #> 3144 TCGA-CV-7416-11 1 763 NA 763 NA NA 0 763 #> 3145 TCGA-CV-7418-01 1 789 0 789 NA NA 1 494 #> 3146 TCGA-CV-7421-01 1 2 NA 2 NA NA 0 2 #> 3147 TCGA-CV-7422-01 1 1037 1 1037 NA NA 1 733 #> 3148 TCGA-CV-7423-01 1 3059 NA 3059 NA NA 0 3059 #> 3149 TCGA-CV-7423-11 1 3059 NA 3059 NA NA 0 3059 #> 3150 TCGA-CV-7424-01 1 453 1 453 NA NA 1 453 #> 3151 TCGA-CV-7424-11 1 453 1 453 NA NA 1 453 #> 3152 TCGA-CV-7425-01 1 1718 1 1718 NA NA 1 1718 #> 3153 TCGA-CV-7425-11 1 1718 1 1718 NA NA 1 1718 #> 3154 TCGA-CV-7427-01 1 4760 0 4760 1 3282 1 3282 #> 3155 TCGA-CV-7428-01 1 1671 1 1671 NA NA 1 1671 #> 3156 TCGA-CV-7429-01 1 107 1 107 NA NA 1 107 #> 3157 TCGA-CV-7430-01 1 495 1 495 NA NA 1 495 #> 3158 TCGA-CV-7432-01 1 2570 1 2570 NA NA 1 2570 #> 3159 TCGA-CV-7432-11 1 2570 1 2570 NA NA 1 2570 #> 3160 TCGA-CV-7433-01 1 601 1 601 NA NA 1 445 #> 3161 TCGA-CV-7434-01 1 218 0 218 NA NA 0 218 #> 3162 TCGA-CV-7434-11 1 218 0 218 NA NA 0 218 #> 3163 TCGA-CV-7435-01 1 4680 0 4680 NA NA 0 4680 #> 3164 TCGA-CV-7437-01 1 506 1 506 NA NA 1 506 #> 3165 TCGA-CV-7437-11 1 506 1 506 NA NA 1 506 #> 3166 TCGA-CV-7438-01 1 194 1 194 NA NA 1 194 #> 3167 TCGA-CV-7438-11 1 194 1 194 NA NA 1 194 #> 3168 TCGA-CV-7440-01 1 675 NA 675 NA NA 0 675 #> 3169 TCGA-CV-7440-11 1 675 NA 675 NA NA 0 675 #> 3170 TCGA-CV-7446-01 1 1093 1 1093 NA NA 1 1093 #> 3171 TCGA-CV-7568-01 1 927 NA 927 NA NA 0 927 #> 3172 TCGA-CV-A45O-01 0 851 0 851 NA NA 0 851 #> 3173 TCGA-CV-A45P-01 0 639 0 639 1 639 1 639 #> 3174 TCGA-CV-A45Q-01 1 5152 0 5152 NA NA 0 5152 #> 3175 TCGA-CV-A45R-01 0 5480 0 5480 0 5480 0 5480 #> 3176 TCGA-CV-A45T-01 1 4856 0 4856 NA NA 0 4856 #> 3177 TCGA-CV-A45U-01 1 1079 1 1079 NA NA 1 1064 #> 3178 TCGA-CV-A45V-01 1 32 NA 32 NA NA 0 32 #> 3179 TCGA-CV-A45W-01 1 1398 0 1398 NA NA 0 1398 #> 3180 TCGA-CV-A45X-01 1 198 0 198 NA NA 0 198 #> 3181 TCGA-CV-A45Y-01 1 2703 0 2703 NA NA 1 2318 #> 3182 TCGA-CV-A45Z-01 1 1466 1 1466 NA NA 1 1466 #> 3183 TCGA-CV-A460-01 1 1838 NA 1838 NA NA 1 1425 #> 3184 TCGA-CV-A461-01 1 2064 0 2064 0 2064 0 2064 #> 3185 TCGA-CV-A463-01 1 23 0 23 NA NA 0 23 #> 3186 TCGA-CV-A464-01 0 1722 0 1722 NA NA 1 28 #> 3187 TCGA-CV-A465-01 1 215 0 215 0 215 0 215 #> 3188 TCGA-CV-A468-01 1 464 0 464 NA NA 0 464 #> 3189 TCGA-CV-A6JD-01 1 182 0 182 NA NA 0 182 #> 3190 TCGA-CV-A6JE-01 0 1075 0 1075 0 1075 0 1075 #> 3191 TCGA-CV-A6JM-01 1 194 0 194 NA NA 1 107 #> 3192 TCGA-CV-A6JN-01 0 906 0 906 0 906 0 906 #> 3193 TCGA-CV-A6JO-01 1 197 1 197 NA NA 1 127 #> 3194 TCGA-CV-A6JT-01 0 852 0 852 0 852 0 852 #> 3195 TCGA-CV-A6JU-01 0 110 0 110 NA NA 0 110 #> 3196 TCGA-CV-A6JY-01 0 646 0 646 NA NA 0 646 #> 3197 TCGA-CV-A6JZ-01 0 714 0 714 NA NA 1 393 #> 3198 TCGA-CV-A6K0-01 0 606 0 606 1 146 1 146 #> 3199 TCGA-CV-A6K1-01 0 685 0 685 NA NA 1 401 #> 3200 TCGA-CV-A6K2-01 1 317 1 317 NA NA 1 134 #> 3201 TCGA-CX-7082-01 1 11 0 11 NA NA 0 11 #> 3202 TCGA-CX-7085-01 0 321 0 321 1 92 1 92 #> 3203 TCGA-CX-7086-01 0 573 0 573 NA NA 0 573 #> 3204 TCGA-CX-7219-01 0 1045 0 1045 NA NA 0 1045 #> 3205 TCGA-CX-A4AQ-01 0 1555 0 1555 NA NA 0 1555 #> 3206 TCGA-D6-6515-01 1 403 0 403 1 195 1 195 #> 3207 TCGA-D6-6516-01 0 773 0 773 0 773 0 773 #> 3208 TCGA-D6-6517-01 0 292 0 292 NA NA 1 161 #> 3209 TCGA-D6-6823-01 0 701 0 701 0 701 0 701 #> 3210 TCGA-D6-6824-01 0 77 0 77 NA NA 0 77 #> 3211 TCGA-D6-6825-01 0 491 0 491 0 491 0 491 #> 3212 TCGA-D6-6826-01 1 348 0 348 NA NA 0 348 #> 3213 TCGA-D6-6827-01 0 568 0 568 0 568 0 568 #> 3214 TCGA-D6-8568-01 0 759 0 759 NA NA 0 759 #> 3215 TCGA-D6-8569-01 0 770 0 770 NA NA 0 770 #> 3216 TCGA-D6-A4Z9-01 0 539 0 539 NA NA 0 539 #> 3217 TCGA-D6-A4ZB-01 0 376 0 376 0 376 0 376 #> 3218 TCGA-D6-A6EK-01 0 875 0 875 NA NA 0 875 #> 3219 TCGA-D6-A6EM-01 0 232 0 232 1 232 1 232 #> 3220 TCGA-D6-A6EN-01 0 687 0 687 0 687 0 687 #> 3221 TCGA-D6-A6EO-01 0 759 0 759 NA NA 0 759 #> 3222 TCGA-D6-A6EP-01 0 424 0 424 0 424 0 424 #> 3223 TCGA-D6-A6EQ-01 0 368 0 368 NA NA 0 368 #> 3224 TCGA-D6-A6ES-01 0 389 0 389 NA NA 0 389 #> 3225 TCGA-D6-A74Q-01 0 710 0 710 NA NA 0 710 #> 3226 TCGA-DQ-5624-01 0 1778 0 1778 NA NA 0 1778 #> 3227 TCGA-DQ-5625-01 1 1133 0 1133 1 1058 1 1058 #> 3228 TCGA-DQ-5629-01 1 941 0 941 NA NA 0 941 #> 3229 TCGA-DQ-5630-01 0 1030 0 1030 0 1030 0 1030 #> 3230 TCGA-DQ-5631-01 1 548 1 548 NA NA 1 447 #> 3231 TCGA-DQ-7588-01 1 427 1 427 NA NA 1 79 #> 3232 TCGA-DQ-7589-01 0 1409 0 1409 NA NA 0 1409 #> 3233 TCGA-DQ-7590-01 0 1413 0 1413 NA NA 0 1413 #> 3234 TCGA-DQ-7591-01 0 622 0 622 NA NA 0 622 #> 3235 TCGA-DQ-7592-01 0 1143 0 1143 NA NA 0 1143 #> 3236 TCGA-DQ-7593-01 0 1224 0 1224 NA NA 0 1224 #> 3237 TCGA-DQ-7594-01 0 1218 0 1218 NA NA 1 1084 #> 3238 TCGA-DQ-7595-01 0 1190 0 1190 0 1190 0 1190 #> 3239 TCGA-DQ-7596-01 0 1265 0 1265 NA NA 1 137 #> 3240 TCGA-F7-7848-01 0 1131 0 1131 NA NA 0 1131 #> 3241 TCGA-F7-8298-01 0 995 0 995 0 995 0 995 #> 3242 TCGA-F7-8489-01 0 658 0 658 0 658 0 658 #> 3243 TCGA-F7-A50I-01 0 92 0 92 NA NA 0 92 #> 3244 TCGA-F7-A50J-01 0 947 0 947 0 947 0 947 #> 3245 TCGA-F7-A61S-01 0 576 0 576 1 213 1 213 #> 3246 TCGA-F7-A61V-01 0 759 0 759 0 759 0 759 #> 3247 TCGA-F7-A61W-01 0 14 0 14 NA NA 0 14 #> 3248 TCGA-F7-A620-01 0 543 0 543 0 543 0 543 #> 3249 TCGA-F7-A622-01 1 359 1 359 NA NA 1 359 #> 3250 TCGA-F7-A623-01 0 616 0 616 NA NA 0 616 #> 3251 TCGA-F7-A624-01 0 378 0 378 0 378 0 378 #> 3252 TCGA-H7-7774-01 0 407 0 407 NA NA 1 252 #> 3253 TCGA-H7-8501-01 0 461 0 461 NA NA 0 461 #> 3254 TCGA-H7-8502-01 0 458 0 458 NA NA 0 458 #> 3255 TCGA-H7-A6C4-01 0 414 0 414 NA NA 1 235 #> 3256 TCGA-H7-A6C4-11 0 414 0 414 NA NA 1 235 #> 3257 TCGA-H7-A6C5-11 0 642 0 642 0 642 0 642 #> 3258 TCGA-H7-A76A-01 0 637 0 637 NA NA 0 637 #> 3259 TCGA-HD-7229-01 0 1027 0 1027 NA NA 1 162 #> 3260 TCGA-HD-7753-01 0 866 0 866 0 866 0 866 #> 3261 TCGA-HD-7754-01 0 783 0 783 NA NA 0 783 #> 3262 TCGA-HD-7831-01 0 667 0 667 NA NA 1 667 #> 3263 TCGA-HD-7832-01 0 836 0 836 NA NA 0 836 #> 3264 TCGA-HD-7917-01 1 836 0 836 0 836 0 836 #> 3265 TCGA-HD-8224-01 1 446 1 446 NA NA 1 171 #> 3266 TCGA-HD-8314-01 0 670 0 670 0 670 0 670 #> 3267 TCGA-HD-8634-01 1 385 0 385 0 385 0 385 #> 3268 TCGA-HD-8635-01 0 695 0 695 0 695 0 695 #> 3269 TCGA-HD-8635-11 0 695 0 695 0 695 0 695 #> 3270 TCGA-HD-A4C1-01 0 11 0 11 NA NA 0 11 #> 3271 TCGA-HD-A633-01 0 421 0 421 NA NA 1 419 #> 3272 TCGA-HD-A634-01 1 130 1 130 NA NA 1 130 #> 3273 TCGA-HD-A6HZ-01 0 111 0 111 NA NA 0 111 #> 3274 TCGA-HD-A6HZ-11 0 111 0 111 NA NA 0 111 #> 3275 TCGA-HD-A6I0-01 0 210 0 210 NA NA 0 210 #> 3276 TCGA-HD-A6I0-11 0 210 0 210 NA NA 0 210 #> 3277 TCGA-HL-7533-01 0 1057 0 1057 NA NA 0 1057 #> 3278 TCGA-IQ-7630-01 0 485 0 485 0 485 0 485 #> 3279 TCGA-IQ-7631-01 0 1172 0 1172 0 1172 0 1172 #> 3280 TCGA-IQ-7632-01 0 441 0 441 NA NA 0 441 #> 3281 TCGA-IQ-A61E-01 0 1147 0 1147 0 1147 0 1147 #> 3282 TCGA-IQ-A61G-01 0 360 0 360 NA NA 1 249 #> 3283 TCGA-IQ-A61H-01 0 1138 0 1138 0 1138 0 1138 #> 3284 TCGA-IQ-A61I-01 1 2 0 2 NA NA 0 2 #> 3285 TCGA-IQ-A61J-01 0 1021 0 1021 NA NA 0 1021 #> 3286 TCGA-IQ-A61O-01 1 421 0 421 NA NA 0 421 #> 3287 TCGA-IQ-A6SG-01 0 579 0 579 0 579 0 579 #> 3288 TCGA-IQ-A6SH-01 0 471 0 471 NA NA 0 471 #> 3289 TCGA-KU-A66S-01 1 406 1 406 1 389 1 389 #> 3290 TCGA-KU-A66T-01 0 552 0 552 NA NA 1 552 #> 3291 TCGA-KU-A6H7-06 0 586 0 586 NA NA 0 586 #> 3292 TCGA-KU-A6H7-01 0 586 0 586 NA NA 0 586 #> 3293 TCGA-KU-A6H8-01 1 327 1 327 NA NA 1 110 #> 3294 TCGA-MT-A51W-01 0 437 0 437 0 437 0 437 #> 3295 TCGA-MT-A51X-01 0 242 0 242 NA NA 0 242 #> 3296 TCGA-MT-A67A-01 0 914 0 914 0 914 0 914 #> 3297 TCGA-MT-A67D-01 0 56 0 56 0 56 0 56 #> 3298 TCGA-MT-A67F-01 0 384 0 384 NA NA 0 384 #> 3299 TCGA-MT-A7BN-01 0 469 0 469 NA NA 1 179 #> 3300 TCGA-MZ-A5BI-01 1 217 NA 217 NA NA 0 217 #> 3301 TCGA-MZ-A6I9-01 1 489 1 489 NA NA 1 246 #> 3302 TCGA-MZ-A7D7-01 0 547 0 547 NA NA 1 339 #> 3303 TCGA-P3-A5Q5-01 0 910 0 910 NA NA 0 910 #> 3304 TCGA-P3-A5Q6-01 1 480 1 480 NA NA 1 280 #> 3305 TCGA-P3-A5QA-01 0 2182 0 2182 1 1601 1 1601 #> 3306 TCGA-P3-A5QE-01 0 1559 0 1559 0 1559 0 1559 #> 3307 TCGA-P3-A5QF-01 1 330 1 330 NA NA 1 140 #> 3308 TCGA-P3-A6SW-01 0 1120 0 1120 NA NA 0 1120 #> 3309 TCGA-P3-A6SX-01 1 1430 0 1430 NA NA 0 1430 #> 3310 TCGA-P3-A6T0-01 0 578 0 578 NA NA 1 365 #> 3311 TCGA-P3-A6T2-01 0 2298 0 2298 NA NA 0 2298 #> 3312 TCGA-P3-A6T3-01 1 577 1 577 NA NA 1 242 #> 3313 TCGA-P3-A6T4-01 1 62 1 62 NA NA 1 62 #> 3314 TCGA-P3-A6T5-01 1 882 1 882 NA NA 1 335 #> 3315 TCGA-P3-A6T6-01 1 395 1 395 NA NA 1 273 #> 3316 TCGA-P3-A6T7-01 1 487 NA 487 NA NA 0 487 #> 3317 TCGA-P3-A6T8-01 0 400 0 400 NA NA 0 400 #> 3318 TCGA-QK-A64Z-01 1 641 1 641 NA NA 1 553 #> 3319 TCGA-QK-A652-01 0 645 0 645 0 645 0 645 #> 3320 TCGA-QK-A6IF-01 0 704 0 704 NA NA 1 502 #> 3321 TCGA-QK-A6IG-01 1 222 1 222 NA NA 1 142 #> 3322 TCGA-QK-A6IH-01 0 653 0 653 NA NA 1 228 #> 3323 TCGA-QK-A6II-01 1 284 1 284 NA NA 1 176 #> 3324 TCGA-QK-A6IJ-01 0 387 0 387 NA NA 0 387 #> 3325 TCGA-QK-A6V9-01 0 833 0 833 0 833 0 833 #> 3326 TCGA-QK-A6VB-01 0 641 0 641 NA NA 1 613 #> 3327 TCGA-QK-A6VC-01 0 600 0 600 NA NA 0 600 #> 3328 TCGA-QK-A8Z7-01 0 392 0 392 NA NA 0 392 #> 3329 TCGA-QK-A8Z8-01 1 171 1 171 NA NA 1 171 #> 3330 TCGA-QK-A8Z9-01 1 449 1 449 NA NA 1 205 #> 3331 TCGA-QK-A8ZA-01 1 371 0 371 NA NA 0 371 #> 3332 TCGA-QK-A8ZB-01 0 542 0 542 NA NA 0 542 #> 3333 TCGA-QK-AA3J-01 0 466 0 466 0 466 0 466 #> 3334 TCGA-QK-AA3K-01 0 253 0 253 NA NA 0 253 #> 3335 TCGA-RS-A6TO-01 1 387 1 387 NA NA 1 338 #> 3336 TCGA-RS-A6TP-01 0 516 0 516 0 516 0 516 #> 3337 TCGA-T2-A6WX-01 1 209 1 209 NA NA 1 209 #> 3338 TCGA-T2-A6WZ-01 1 484 1 484 NA NA 1 229 #> 3339 TCGA-T2-A6X0-01 0 216 0 216 NA NA 0 216 #> 3340 TCGA-T2-A6X2-01 0 987 0 987 0 987 0 987 #> 3341 TCGA-T3-A92M-01 0 417 0 417 NA NA 1 417 #> 3342 TCGA-T3-A92N-01 1 95 1 95 NA NA 1 46 #> 3343 TCGA-TN-A7HI-01 0 412 0 412 NA NA 0 412 #> 3344 TCGA-TN-A7HJ-01 0 403 0 403 NA NA 0 403 #> 3345 TCGA-TN-A7HL-01 0 619 0 619 NA NA 0 619 #> 3346 TCGA-UF-A718-01 0 1971 0 1971 NA NA 0 1971 #> 3347 TCGA-UF-A719-01 0 1663 0 1663 0 1663 0 1663 #> 3348 TCGA-UF-A71A-06 1 86 1 86 NA NA 1 86 #> 3349 TCGA-UF-A71A-01 1 86 1 86 NA NA 1 86 #> 3350 TCGA-UF-A71B-01 0 1506 0 1506 NA NA 0 1506 #> 3351 TCGA-UF-A71D-01 0 1461 0 1461 NA NA 0 1461 #> 3352 TCGA-UF-A71E-01 1 1504 0 1504 NA NA 0 1504 #> 3353 TCGA-UF-A7J9-01 0 1358 0 1358 NA NA 0 1358 #> 3354 TCGA-UF-A7JA-01 0 2265 0 2265 NA NA 0 2265 #> 3355 TCGA-UF-A7JC-01 1 546 1 546 NA NA 1 229 #> 3356 TCGA-UF-A7JD-01 1 739 0 739 NA NA 0 739 #> 3357 TCGA-UF-A7JF-01 0 1686 0 1686 NA NA 0 1686 #> 3358 TCGA-UF-A7JH-01 0 896 0 896 NA NA 0 896 #> 3359 TCGA-UF-A7JJ-01 0 549 0 549 NA NA 0 549 #> 3360 TCGA-UF-A7JK-01 1 424 1 424 NA NA 1 341 #> 3361 TCGA-UF-A7JO-01 1 631 1 631 NA NA 1 525 #> 3362 TCGA-UF-A7JS-01 1 680 1 680 NA NA 1 519 #> 3363 TCGA-UF-A7JT-01 1 993 1 993 NA NA 1 718 #> 3364 TCGA-UF-A7JV-01 1 90 1 90 NA NA 1 55 #> 3365 TCGA-UP-A6WW-01 0 518 0 518 NA NA 0 518 #> 3366 TCGA-WA-A7GZ-01 1 625 0 625 0 625 0 625 #> 3367 TCGA-WA-A7GZ-11 1 625 0 625 0 625 0 625 #> 3368 TCGA-WA-A7H4-01 0 443 0 443 0 443 0 443 #> 3369 TCGA-KL-8323-01 1 1158 1 1158 NA NA 1 758 #> 3370 TCGA-KL-8324-01 0 4676 0 4676 NA NA 0 4676 #> 3371 TCGA-KL-8324-11 0 4676 0 4676 NA NA 0 4676 #> 3372 TCGA-KL-8325-01 1 725 0 725 NA NA 0 725 #> 3373 TCGA-KL-8326-01 0 3322 0 3322 NA NA 0 3322 #> 3374 TCGA-KL-8326-11 0 3322 0 3322 NA NA 0 3322 #> 3375 TCGA-KL-8327-01 0 4169 0 4169 NA NA 0 4169 #> 3376 TCGA-KL-8328-01 0 3127 0 3127 NA NA 0 3127 #> 3377 TCGA-KL-8329-01 0 2752 0 2752 NA NA 0 2752 #> 3378 TCGA-KL-8329-11 0 2752 0 2752 NA NA 0 2752 #> 3379 TCGA-KL-8330-01 0 3304 0 3304 NA NA 0 3304 #> 3380 TCGA-KL-8331-01 0 3010 0 3010 NA NA 0 3010 #> 3381 TCGA-KL-8332-01 0 2582 0 2582 NA NA 0 2582 #> 3382 TCGA-KL-8332-11 0 2582 0 2582 NA NA 0 2582 #> 3383 TCGA-KL-8333-01 0 2991 0 2991 NA NA 0 2991 #> 3384 TCGA-KL-8334-01 0 2949 0 2949 NA NA 0 2949 #> 3385 TCGA-KL-8335-01 0 2815 0 2815 NA NA 0 2815 #> 3386 TCGA-KL-8336-01 1 920 1 920 NA NA 1 47 #> 3387 TCGA-KL-8336-11 1 920 1 920 NA NA 1 47 #> 3388 TCGA-KL-8337-01 0 1364 0 1364 NA NA 0 1364 #> 3389 TCGA-KL-8338-01 0 2633 0 2633 NA NA 0 2633 #> 3390 TCGA-KL-8339-01 1 855 1 855 NA NA 1 64 #> 3391 TCGA-KL-8339-11 1 855 1 855 NA NA 1 64 #> 3392 TCGA-KL-8340-01 0 2024 0 2024 NA NA 0 2024 #> 3393 TCGA-KL-8341-01 1 754 1 754 NA NA 1 175 #> 3394 TCGA-KL-8342-01 0 2248 0 2248 NA NA 0 2248 #> 3395 TCGA-KL-8343-01 1 2172 1 2172 NA NA 1 2172 #> 3396 TCGA-KL-8344-01 0 876 0 876 NA NA 0 876 #> 3397 TCGA-KL-8345-01 0 1665 0 1665 NA NA 0 1665 #> 3398 TCGA-KL-8346-01 0 1897 0 1897 NA NA 0 1897 #> 3399 TCGA-KM-8438-01 0 4622 0 4622 1 2317 1 2317 #> 3400 TCGA-KM-8439-01 0 708 0 708 NA NA 0 708 #> 3401 TCGA-KM-8440-01 0 1366 0 1366 0 1366 0 1366 #> 3402 TCGA-KM-8441-01 0 876 0 876 1 876 1 876 #> 3403 TCGA-KM-8442-01 0 1437 0 1437 NA NA 0 1437 #> 3404 TCGA-KM-8443-01 0 1520 0 1520 0 1520 0 1520 #> 3405 TCGA-KM-8476-01 0 3745 0 3745 0 3745 0 3745 #> 3406 TCGA-KM-8477-01 0 1553 0 1553 0 1553 0 1553 #> 3407 TCGA-KM-8639-01 0 953 0 953 0 953 0 953 #> 3408 TCGA-KN-8418-01 0 3935 0 3935 NA NA 0 3935 #> 3409 TCGA-KN-8419-01 0 714 0 714 0 714 0 714 #> 3410 TCGA-KN-8419-11 0 714 0 714 0 714 0 714 #> 3411 TCGA-KN-8421-01 0 2674 0 2674 NA NA 0 2674 #> 3412 TCGA-KN-8422-01 0 775 0 775 0 775 0 775 #> 3413 TCGA-KN-8422-11 0 775 0 775 0 775 0 775 #> 3414 TCGA-KN-8423-01 0 788 0 788 0 788 0 788 #> 3415 TCGA-KN-8423-11 0 788 0 788 0 788 0 788 #> 3416 TCGA-KN-8424-01 0 1983 0 1983 0 1983 0 1983 #> 3417 TCGA-KN-8424-11 0 1983 0 1983 0 1983 0 1983 #> 3418 TCGA-KN-8425-01 0 3179 0 3179 0 3179 0 3179 #> 3419 TCGA-KN-8425-11 0 3179 0 3179 0 3179 0 3179 #> 3420 TCGA-KN-8426-01 0 108 0 108 NA NA 0 108 #> 3421 TCGA-KN-8426-11 0 108 0 108 NA NA 0 108 #> 3422 TCGA-KN-8427-01 0 30 0 30 NA NA 0 30 #> 3423 TCGA-KN-8427-11 0 30 0 30 NA NA 0 30 #> 3424 TCGA-KN-8428-01 1 1590 1 1590 NA NA 1 478 #> 3425 TCGA-KN-8428-11 1 1590 1 1590 NA NA 1 478 #> 3426 TCGA-KN-8429-01 0 2650 0 2650 1 1989 1 1989 #> 3427 TCGA-KN-8429-11 0 2650 0 2650 1 1989 1 1989 #> 3428 TCGA-KN-8430-01 1 NA 1 NA NA NA 1 NA #> 3429 TCGA-KN-8430-11 1 NA 1 NA NA NA 1 NA #> 3430 TCGA-KN-8431-01 0 588 0 588 NA NA 0 588 #> 3431 TCGA-KN-8431-11 0 588 0 588 NA NA 0 588 #> 3432 TCGA-KN-8432-01 0 76 0 76 0 76 0 76 #> 3433 TCGA-KN-8432-11 0 76 0 76 0 76 0 76 #> 3434 TCGA-KN-8433-01 0 341 0 341 0 341 0 341 #> 3435 TCGA-KN-8433-11 0 341 0 341 0 341 0 341 #> 3436 TCGA-KN-8434-01 0 1797 0 1797 0 1797 0 1797 #> 3437 TCGA-KN-8434-11 0 1797 0 1797 0 1797 0 1797 #> 3438 TCGA-KN-8435-01 0 3498 0 3498 0 3498 0 3498 #> 3439 TCGA-KN-8435-11 0 3498 0 3498 0 3498 0 3498 #> 3440 TCGA-KN-8436-01 0 1288 0 1288 0 1288 0 1288 #> 3441 TCGA-KN-8436-11 0 1288 0 1288 0 1288 0 1288 #> 3442 TCGA-KN-8437-01 0 3068 0 3068 0 3068 0 3068 #> 3443 TCGA-KN-8437-11 0 3068 0 3068 0 3068 0 3068 #> 3444 TCGA-KO-8403-01 0 3208 0 3208 NA NA 0 3208 #> 3445 TCGA-KO-8403-11 0 3208 0 3208 NA NA 0 3208 #> 3446 TCGA-KO-8404-01 1 325 1 325 NA NA 1 148 #> 3447 TCGA-KO-8405-01 0 3056 0 3056 0 3056 0 3056 #> 3448 TCGA-KO-8406-01 0 3145 0 3145 0 3145 0 3145 #> 3449 TCGA-KO-8407-01 0 2820 0 2820 0 2820 0 2820 #> 3450 TCGA-KO-8408-01 1 507 0 507 NA NA 1 46 #> 3451 TCGA-KO-8409-01 0 3180 0 3180 0 3180 0 3180 #> 3452 TCGA-KO-8410-01 0 3136 0 3136 NA NA 0 3136 #> 3453 TCGA-KO-8411-01 0 3958 0 3958 0 3958 0 3958 #> 3454 TCGA-KO-8413-01 0 3038 0 3038 0 3038 0 3038 #> 3455 TCGA-KO-8414-01 0 3212 0 3212 0 3212 0 3212 #> 3456 TCGA-KO-8415-01 0 2939 0 2939 0 2939 0 2939 #> 3457 TCGA-KO-8415-11 0 2939 0 2939 0 2939 0 2939 #> 3458 TCGA-KO-8416-01 0 2752 0 2752 0 2752 0 2752 #> 3459 TCGA-KO-8417-01 0 2815 0 2815 0 2815 0 2815 #> 3460 TCGA-3Z-A93Z-01 0 385 0 385 0 385 0 385 #> 3461 TCGA-6D-AA2E-01 0 362 0 362 NA NA 0 362 #> 3462 TCGA-A3-3306-01 0 1120 0 1120 NA NA 0 1120 #> 3463 TCGA-A3-3307-01 0 1436 0 1436 NA NA 0 1436 #> 3464 TCGA-A3-3308-01 0 16 0 16 NA NA 0 16 #> 3465 TCGA-A3-3311-01 1 1191 0 1191 NA NA 0 1191 #> 3466 TCGA-A3-3313-01 1 735 0 735 NA NA 0 735 #> 3467 TCGA-A3-3316-01 0 1493 0 1493 NA NA 0 1493 #> 3468 TCGA-A3-3317-01 0 1491 0 1491 NA NA 1 560 #> 3469 TCGA-A3-3319-01 0 1130 0 1130 NA NA 0 1130 #> 3470 TCGA-A3-3320-01 0 1508 0 1508 NA NA 0 1508 #> 3471 TCGA-A3-3322-01 0 1478 0 1478 NA NA 0 1478 #> 3472 TCGA-A3-3323-01 0 1106 0 1106 NA NA 0 1106 #> 3473 TCGA-A3-3324-01 0 1186 0 1186 NA NA 0 1186 #> 3474 TCGA-A3-3325-01 1 1170 0 1170 NA NA 0 1170 #> 3475 TCGA-A3-3326-01 0 1137 0 1137 NA NA 0 1137 #> 3476 TCGA-A3-3328-01 0 1385 0 1385 0 1385 0 1385 #> 3477 TCGA-A3-3329-01 0 1624 0 1624 0 1624 0 1624 #> 3478 TCGA-A3-3331-01 0 1485 0 1485 NA NA 0 1485 #> 3479 TCGA-A3-3335-01 0 1886 0 1886 1 1098 1 1098 #> 3480 TCGA-A3-3343-01 0 945 0 945 NA NA 0 945 #> 3481 TCGA-A3-3346-01 1 137 1 137 NA NA 1 114 #> 3482 TCGA-A3-3347-01 1 1610 1 1610 NA NA 1 610 #> 3483 TCGA-A3-3349-01 0 1385 0 1385 NA NA 0 1385 #> 3484 TCGA-A3-3351-01 0 910 0 910 NA NA 0 910 #> 3485 TCGA-A3-3352-01 1 561 0 561 0 561 0 561 #> 3486 TCGA-A3-3357-01 0 2688 0 2688 0 2688 0 2688 #> 3487 TCGA-A3-3358-01 0 1307 0 1307 NA NA 0 1307 #> 3488 TCGA-A3-3358-11 0 1307 0 1307 NA NA 0 1307 #> 3489 TCGA-A3-3359-01 0 2504 0 2504 0 2504 0 2504 #> 3490 TCGA-A3-3362-01 0 1559 0 1559 NA NA 0 1559 #> 3491 TCGA-A3-3363-01 0 319 0 319 NA NA 0 319 #> 3492 TCGA-A3-3365-01 0 873 0 873 NA NA 0 873 #> 3493 TCGA-A3-3367-01 0 2270 0 2270 0 2270 0 2270 #> 3494 TCGA-A3-3370-01 0 2274 0 2274 0 2274 0 2274 #> 3495 TCGA-A3-3372-01 0 735 0 735 NA NA 0 735 #> 3496 TCGA-A3-3373-01 0 1621 0 1621 0 1621 0 1621 #> 3497 TCGA-A3-3374-01 0 1314 0 1314 NA NA 0 1314 #> 3498 TCGA-A3-3376-01 1 1696 0 1696 0 1696 0 1696 #> 3499 TCGA-A3-3378-01 0 630 0 630 NA NA 0 630 #> 3500 TCGA-A3-3380-01 0 567 0 567 NA NA 0 567 #> 3501 TCGA-A3-3382-01 0 574 0 574 NA NA 1 514 #> 3502 TCGA-A3-3383-01 0 861 0 861 NA NA 0 861 #> 3503 TCGA-A3-3385-01 0 1993 0 1993 0 1993 0 1993 #> 3504 TCGA-A3-3387-01 0 617 0 617 NA NA 0 617 #> 3505 TCGA-A3-3387-11 0 617 0 617 NA NA 0 617 #> 3506 TCGA-A3-A6NI-01 0 1018 0 1018 0 1018 0 1018 #> 3507 TCGA-A3-A6NJ-01 0 468 0 468 0 468 0 468 #> 3508 TCGA-A3-A6NN-01 0 3 0 3 0 3 0 3 #> 3509 TCGA-A3-A8CQ-01 0 3 0 3 NA NA 0 3 #> 3510 TCGA-A3-A8OU-01 0 0 0 0 0 0 0 0 #> 3511 TCGA-A3-A8OV-01 0 340 0 340 0 340 0 340 #> 3512 TCGA-A3-A8OW-01 0 323 0 323 0 323 0 323 #> 3513 TCGA-A3-A8OX-01 0 0 0 0 0 0 0 0 #> 3514 TCGA-AK-3425-01 0 3343 0 3343 NA NA 0 3343 #> 3515 TCGA-AK-3426-01 1 885 1 885 NA NA 1 256 #> 3516 TCGA-AK-3427-01 0 3583 0 3583 0 3583 0 3583 #> 3517 TCGA-AK-3428-01 0 3728 0 3728 0 3728 0 3728 #> 3518 TCGA-AK-3429-01 0 3328 0 3328 0 3328 0 3328 #> 3519 TCGA-AK-3431-01 1 2241 0 2241 0 2241 0 2241 #> 3520 TCGA-AK-3433-01 0 3409 0 3409 0 3409 0 3409 #> 3521 TCGA-AK-3434-01 0 2087 0 2087 NA NA 1 1640 #> 3522 TCGA-AK-3436-01 0 3331 0 3331 NA NA 1 1189 #> 3523 TCGA-AK-3440-01 0 2865 0 2865 0 2865 0 2865 #> 3524 TCGA-AK-3443-01 0 1423 0 1423 NA NA 0 1423 #> 3525 TCGA-AK-3444-01 0 1471 0 1471 NA NA 0 1471 #> 3526 TCGA-AK-3445-01 0 2392 0 2392 0 2392 0 2392 #> 3527 TCGA-AK-3447-01 0 1217 0 1217 NA NA 0 1217 #> 3528 TCGA-AK-3450-01 0 1779 0 1779 NA NA 0 1779 #> 3529 TCGA-AK-3451-01 0 2868 0 2868 0 2868 0 2868 #> 3530 TCGA-AK-3453-01 0 2531 0 2531 0 2531 0 2531 #> 3531 TCGA-AK-3454-01 0 874 0 874 NA NA 0 874 #> 3532 TCGA-AK-3455-01 1 683 NA 683 NA NA 0 683 #> 3533 TCGA-AK-3456-01 0 1143 0 1143 NA NA 0 1143 #> 3534 TCGA-AK-3458-01 0 1168 0 1168 NA NA 0 1168 #> 3535 TCGA-AK-3460-01 0 2508 0 2508 0 2508 0 2508 #> 3536 TCGA-AK-3461-01 0 2217 0 2217 0 2217 0 2217 #> 3537 TCGA-AK-3465-01 0 369 0 369 NA NA 0 369 #> 3538 TCGA-AS-3777-01 0 1238 0 1238 NA NA 0 1238 #> 3539 TCGA-AS-3778-01 0 43 0 43 NA NA 0 43 #> 3540 TCGA-B0-4688-01 1 101 1 101 NA NA 1 101 #> 3541 TCGA-B0-4690-01 1 43 1 43 NA NA 1 43 #> 3542 TCGA-B0-4691-01 1 139 1 139 NA NA 1 139 #> 3543 TCGA-B0-4693-01 1 77 0 77 NA NA 0 77 #> 3544 TCGA-B0-4694-01 1 106 0 106 NA NA 0 106 #> 3545 TCGA-B0-4696-01 1 866 1 866 NA NA 1 794 #> 3546 TCGA-B0-4697-01 1 578 1 578 NA NA 1 578 #> 3547 TCGA-B0-4698-01 1 42 1 42 NA NA 1 42 #> 3548 TCGA-B0-4699-01 1 110 NA 110 NA NA 0 110 #> 3549 TCGA-B0-4700-01 1 1980 1 1980 NA NA 1 1980 #> 3550 TCGA-B0-4700-11 1 1980 1 1980 NA NA 1 1980 #> 3551 TCGA-B0-4701-01 1 238 1 238 NA NA 1 238 #> 3552 TCGA-B0-4703-01 1 182 1 182 NA NA 1 182 #> 3553 TCGA-B0-4706-01 1 65 0 65 NA NA 0 65 #> 3554 TCGA-B0-4707-01 1 600 1 600 NA NA 1 600 #> 3555 TCGA-B0-4710-01 0 1755 0 1755 0 1755 0 1755 #> 3556 TCGA-B0-4712-01 1 1337 1 1337 NA NA 1 1337 #> 3557 TCGA-B0-4712-11 1 1337 1 1337 NA NA 1 1337 #> 3558 TCGA-B0-4713-01 1 202 1 202 NA NA 1 202 #> 3559 TCGA-B0-4714-01 1 99 1 99 NA NA 1 99 #> 3560 TCGA-B0-4718-01 0 1778 0 1778 NA NA 1 768 #> 3561 TCGA-B0-4810-01 1 478 1 478 NA NA 1 205 #> 3562 TCGA-B0-4811-01 1 1417 1 1417 NA NA 1 458 #> 3563 TCGA-B0-4813-01 1 18 0 18 NA NA 0 18 #> 3564 TCGA-B0-4814-01 1 168 1 168 NA NA 1 168 #> 3565 TCGA-B0-4815-01 1 1588 1 1588 NA NA 1 1588 #> 3566 TCGA-B0-4816-01 1 1371 1 1371 NA NA 1 1371 #> 3567 TCGA-B0-4817-01 1 1019 0 1019 NA NA 0 1019 #> 3568 TCGA-B0-4818-01 1 510 1 510 NA NA 1 127 #> 3569 TCGA-B0-4821-01 1 1230 1 1230 NA NA 1 1230 #> 3570 TCGA-B0-4822-01 1 1111 1 1111 NA NA 1 1111 #> 3571 TCGA-B0-4823-01 1 454 0 454 NA NA 0 454 #> 3572 TCGA-B0-4824-01 1 1657 0 1657 NA NA 0 1657 #> 3573 TCGA-B0-4827-01 1 885 1 885 NA NA 1 668 #> 3574 TCGA-B0-4828-01 1 307 1 307 NA NA 1 307 #> 3575 TCGA-B0-4833-01 1 2386 1 2386 NA NA 1 2386 #> 3576 TCGA-B0-4834-01 1 2090 0 2090 NA NA 0 2090 #> 3577 TCGA-B0-4836-01 1 1238 1 1238 NA NA 1 1238 #> 3578 TCGA-B0-4837-01 1 1378 1 1378 NA NA 1 1208 #> 3579 TCGA-B0-4838-01 1 834 0 834 NA NA 0 834 #> 3580 TCGA-B0-4839-01 1 1639 0 1639 NA NA 0 1639 #> 3581 TCGA-B0-4841-01 1 204 1 204 NA NA 1 108 #> 3582 TCGA-B0-4842-01 1 1724 1 1724 NA NA 1 250 #> 3583 TCGA-B0-4843-01 1 320 1 320 NA NA 1 320 #> 3584 TCGA-B0-4844-01 1 313 1 313 NA NA 1 62 #> 3585 TCGA-B0-4845-01 1 1986 1 1986 NA NA 1 748 #> 3586 TCGA-B0-4846-01 1 1200 1 1200 NA NA 1 163 #> 3587 TCGA-B0-4847-01 1 793 NA 793 NA NA 0 793 #> 3588 TCGA-B0-4848-01 1 883 1 883 NA NA 1 494 #> 3589 TCGA-B0-4849-01 1 69 1 69 NA NA 1 4 #> 3590 TCGA-B0-4852-01 1 1121 1 1121 NA NA 1 860 #> 3591 TCGA-B0-4945-01 1 2145 0 2145 NA NA 0 2145 #> 3592 TCGA-B0-5075-01 1 637 0 637 NA NA 0 637 #> 3593 TCGA-B0-5077-01 1 1317 0 1317 NA NA 0 1317 #> 3594 TCGA-B0-5080-01 1 342 1 342 NA NA 1 103 #> 3595 TCGA-B0-5081-01 1 362 1 362 NA NA 1 213 #> 3596 TCGA-B0-5083-01 1 1045 1 1045 NA NA 1 1045 #> 3597 TCGA-B0-5084-01 1 222 1 222 NA NA 1 65 #> 3598 TCGA-B0-5085-01 1 770 0 770 NA NA 0 770 #> 3599 TCGA-B0-5088-01 1 563 0 563 NA NA 0 563 #> 3600 TCGA-B0-5092-01 1 459 1 459 NA NA 1 459 #> 3601 TCGA-B0-5094-01 1 333 1 333 NA NA 1 75 #> 3602 TCGA-B0-5095-01 1 245 0 245 NA NA 0 245 #> 3603 TCGA-B0-5096-01 1 68 0 68 NA NA 0 68 #> 3604 TCGA-B0-5097-01 0 665 0 665 NA NA 1 359 #> 3605 TCGA-B0-5098-01 1 1584 NA 1584 NA NA 0 1584 #> 3606 TCGA-B0-5099-01 1 485 NA 485 NA NA 0 485 #> 3607 TCGA-B0-5100-01 1 1913 1 1913 NA NA 1 1426 #> 3608 TCGA-B0-5102-01 1 2764 NA 2764 NA NA 1 2734 #> 3609 TCGA-B0-5104-01 1 2752 0 2752 NA NA 0 2752 #> 3610 TCGA-B0-5106-01 1 1598 0 1598 NA NA 0 1598 #> 3611 TCGA-B0-5107-01 1 927 1 927 NA NA 1 549 #> 3612 TCGA-B0-5108-01 0 1782 0 1782 0 1782 0 1782 #> 3613 TCGA-B0-5109-01 1 587 1 587 NA NA 1 70 #> 3614 TCGA-B0-5110-01 0 2009 0 2009 0 2009 0 2009 #> 3615 TCGA-B0-5113-01 0 1175 0 1175 0 1175 0 1175 #> 3616 TCGA-B0-5115-01 0 1604 0 1604 NA NA 1 75 #> 3617 TCGA-B0-5116-01 0 1274 0 1274 1 1129 1 1129 #> 3618 TCGA-B0-5117-01 0 1608 0 1608 0 1608 0 1608 #> 3619 TCGA-B0-5119-01 0 1552 0 1552 0 1552 0 1552 #> 3620 TCGA-B0-5120-01 0 1169 0 1169 0 1169 0 1169 #> 3621 TCGA-B0-5121-01 0 1485 0 1485 0 1485 0 1485 #> 3622 TCGA-B0-5399-01 0 1411 0 1411 0 1411 0 1411 #> 3623 TCGA-B0-5400-01 0 1733 0 1733 0 1733 0 1733 #> 3624 TCGA-B0-5402-01 0 1290 0 1290 NA NA 1 444 #> 3625 TCGA-B0-5402-11 0 1290 0 1290 NA NA 1 444 #> 3626 TCGA-B0-5690-01 0 3392 0 3392 NA NA 0 3392 #> 3627 TCGA-B0-5690-11 0 3392 0 3392 NA NA 0 3392 #> 3628 TCGA-B0-5691-01 0 3431 0 3431 NA NA 1 3250 #> 3629 TCGA-B0-5691-11 0 3431 0 3431 NA NA 1 3250 #> 3630 TCGA-B0-5692-01 0 3944 0 3944 0 3944 0 3944 #> 3631 TCGA-B0-5693-01 0 4074 0 4074 0 4074 0 4074 #> 3632 TCGA-B0-5694-01 1 480 1 480 NA NA 1 288 #> 3633 TCGA-B0-5694-11 1 480 1 480 NA NA 1 288 #> 3634 TCGA-B0-5695-01 0 2150 0 2150 0 2150 0 2150 #> 3635 TCGA-B0-5696-01 0 2609 0 2609 1 1717 1 1717 #> 3636 TCGA-B0-5696-11 0 2609 0 2609 1 1717 1 1717 #> 3637 TCGA-B0-5697-01 0 2630 0 2630 0 2630 0 2630 #> 3638 TCGA-B0-5697-11 0 2630 0 2630 0 2630 0 2630 #> 3639 TCGA-B0-5698-01 0 3631 0 3631 0 3631 0 3631 #> 3640 TCGA-B0-5699-01 0 3841 0 3841 1 94 1 94 #> 3641 TCGA-B0-5699-11 0 3841 0 3841 1 94 1 94 #> 3642 TCGA-B0-5700-01 0 1790 0 1790 0 1790 0 1790 #> 3643 TCGA-B0-5701-01 0 2461 0 2461 1 224 1 224 #> 3644 TCGA-B0-5701-11 0 2461 0 2461 1 224 1 224 #> 3645 TCGA-B0-5702-01 0 2172 0 2172 0 2172 0 2172 #> 3646 TCGA-B0-5703-01 0 2246 0 2246 0 2246 0 2246 #> 3647 TCGA-B0-5703-11 0 2246 0 2246 0 2246 0 2246 #> 3648 TCGA-B0-5705-01 0 4537 0 4537 1 842 1 842 #> 3649 TCGA-B0-5705-11 0 4537 0 4537 1 842 1 842 #> 3650 TCGA-B0-5706-01 0 3205 0 3205 0 3205 0 3205 #> 3651 TCGA-B0-5706-11 0 3205 0 3205 0 3205 0 3205 #> 3652 TCGA-B0-5707-01 0 3744 0 3744 0 3744 0 3744 #> 3653 TCGA-B0-5709-01 0 3974 0 3974 0 3974 0 3974 #> 3654 TCGA-B0-5709-11 0 3974 0 3974 0 3974 0 3974 #> 3655 TCGA-B0-5710-01 0 2430 0 2430 NA NA 1 1441 #> 3656 TCGA-B0-5711-01 0 3989 0 3989 1 3766 1 3766 #> 3657 TCGA-B0-5711-11 0 3989 0 3989 1 3766 1 3766 #> 3658 TCGA-B0-5712-01 0 2722 0 2722 NA NA 1 725 #> 3659 TCGA-B0-5712-11 0 2722 0 2722 NA NA 1 725 #> 3660 TCGA-B0-5713-01 0 2782 0 2782 0 2782 0 2782 #> 3661 TCGA-B0-5812-01 0 3834 0 3834 0 3834 0 3834 #> 3662 TCGA-B2-3923-01 0 992 0 992 0 992 0 992 #> 3663 TCGA-B2-3924-01 0 1092 0 1092 0 1092 0 1092 #> 3664 TCGA-B2-4098-01 1 51 0 51 NA NA 0 51 #> 3665 TCGA-B2-4099-01 0 972 0 972 0 972 0 972 #> 3666 TCGA-B2-4101-01 0 648 0 648 0 648 0 648 #> 3667 TCGA-B2-4102-01 0 952 0 952 0 952 0 952 #> 3668 TCGA-B2-5633-01 0 963 0 963 0 963 0 963 #> 3669 TCGA-B2-5635-01 0 755 0 755 0 755 0 755 #> 3670 TCGA-B2-5636-01 0 919 0 919 0 919 0 919 #> 3671 TCGA-B2-5636-11 0 919 0 919 0 919 0 919 #> 3672 TCGA-B2-5639-01 1 1003 1 1003 NA NA 1 163 #> 3673 TCGA-B2-5641-01 0 656 0 656 0 656 0 656 #> 3674 TCGA-B2-5641-11 0 656 0 656 0 656 0 656 #> 3675 TCGA-B2-A4SR-01 0 507 0 507 1 266 1 266 #> 3676 TCGA-B4-5377-01 0 365 0 365 NA NA 0 365 #> 3677 TCGA-B4-5378-01 0 175 0 175 NA NA 0 175 #> 3678 TCGA-B4-5832-01 0 155 0 155 0 155 0 155 #> 3679 TCGA-B4-5834-01 0 38 0 38 NA NA 0 38 #> 3680 TCGA-B4-5835-01 0 16 0 16 NA NA 0 16 #> 3681 TCGA-B4-5836-01 0 141 0 141 NA NA 0 141 #> 3682 TCGA-B4-5838-01 0 166 0 166 NA NA 0 166 #> 3683 TCGA-B4-5843-01 0 11 0 11 NA NA 0 11 #> 3684 TCGA-B4-5844-01 0 7 0 7 NA NA 0 7 #> 3685 TCGA-B8-4143-01 1 709 1 709 NA NA 1 709 #> 3686 TCGA-B8-4146-01 0 511 0 511 0 511 0 511 #> 3687 TCGA-B8-4148-01 0 1520 0 1520 0 1520 0 1520 #> 3688 TCGA-B8-4151-01 0 1299 0 1299 0 1299 0 1299 #> 3689 TCGA-B8-4153-01 0 762 0 762 NA NA 1 223 #> 3690 TCGA-B8-4154-01 0 1380 0 1380 0 1380 0 1380 #> 3691 TCGA-B8-4619-01 0 523 0 523 0 523 0 523 #> 3692 TCGA-B8-4619-11 0 523 0 523 0 523 0 523 #> 3693 TCGA-B8-4620-01 0 777 0 777 1 604 1 604 #> 3694 TCGA-B8-4620-11 0 777 0 777 1 604 1 604 #> 3695 TCGA-B8-4621-01 0 788 0 788 0 788 0 788 #> 3696 TCGA-B8-4622-01 0 1525 0 1525 NA NA 1 1227 #> 3697 TCGA-B8-4622-11 0 1525 0 1525 NA NA 1 1227 #> 3698 TCGA-B8-5158-01 0 1218 0 1218 0 1218 0 1218 #> 3699 TCGA-B8-5159-01 0 722 0 722 0 722 0 722 #> 3700 TCGA-B8-5162-01 0 36 0 36 NA NA 0 36 #> 3701 TCGA-B8-5163-01 0 822 0 822 0 822 0 822 #> 3702 TCGA-B8-5164-01 0 26 0 26 NA NA 0 26 #> 3703 TCGA-B8-5165-01 0 737 0 737 0 737 0 737 #> 3704 TCGA-B8-5545-01 0 1525 0 1525 0 1525 0 1525 #> 3705 TCGA-B8-5546-01 0 505 0 505 NA NA 0 505 #> 3706 TCGA-B8-5549-01 0 194 0 194 0 194 0 194 #> 3707 TCGA-B8-5549-11 0 194 0 194 0 194 0 194 #> 3708 TCGA-B8-5550-01 0 1476 0 1476 1 694 1 694 #> 3709 TCGA-B8-5551-01 0 16 0 16 NA NA 0 16 #> 3710 TCGA-B8-5552-01 0 1046 0 1046 0 1046 0 1046 #> 3711 TCGA-B8-5552-11 0 1046 0 1046 0 1046 0 1046 #> 3712 TCGA-B8-5553-01 0 435 0 435 NA NA 0 435 #> 3713 TCGA-B8-A54D-01 0 830 0 830 0 830 0 830 #> 3714 TCGA-B8-A54E-01 0 909 0 909 0 909 0 909 #> 3715 TCGA-B8-A54F-01 0 519 0 519 0 519 0 519 #> 3716 TCGA-B8-A54G-01 0 53 0 53 0 53 0 53 #> 3717 TCGA-B8-A54H-01 0 256 0 256 0 256 0 256 #> 3718 TCGA-B8-A54I-01 0 150 0 150 0 150 0 150 #> 3719 TCGA-B8-A54J-01 0 528 0 528 0 528 0 528 #> 3720 TCGA-B8-A54K-01 0 469 0 469 0 469 0 469 #> 3721 TCGA-B8-A7U6-01 0 495 0 495 0 495 0 495 #> 3722 TCGA-B8-A8YJ-01 0 431 0 431 0 431 0 431 #> 3723 TCGA-BP-4158-01 0 3377 0 3377 NA NA 0 3377 #> 3724 TCGA-BP-4159-01 1 2601 1 2601 NA NA 1 2352 #> 3725 TCGA-BP-4160-01 0 2881 0 2881 NA NA 0 2881 #> 3726 TCGA-BP-4161-01 0 2746 0 2746 NA NA 1 2685 #> 3727 TCGA-BP-4162-01 0 3074 0 3074 NA NA 0 3074 #> 3728 TCGA-BP-4163-01 0 2839 0 2839 NA NA 0 2839 #> 3729 TCGA-BP-4164-01 1 992 0 992 NA NA 0 992 #> 3730 TCGA-BP-4165-01 0 3037 0 3037 NA NA 1 1049 #> 3731 TCGA-BP-4166-01 0 13 0 13 NA NA 0 13 #> 3732 TCGA-BP-4167-01 0 2718 0 2718 NA NA 0 2718 #> 3733 TCGA-BP-4169-01 1 701 1 701 NA NA 1 78 #> 3734 TCGA-BP-4170-01 1 2343 0 2343 NA NA 0 2343 #> 3735 TCGA-BP-4173-01 0 1893 0 1893 NA NA 0 1893 #> 3736 TCGA-BP-4174-01 0 1879 0 1879 NA NA 0 1879 #> 3737 TCGA-BP-4176-01 0 1955 0 1955 NA NA 0 1955 #> 3738 TCGA-BP-4177-01 0 1670 0 1670 NA NA 0 1670 #> 3739 TCGA-BP-4325-01 0 2964 0 2964 NA NA 0 2964 #> 3740 TCGA-BP-4326-01 1 1625 1 1625 NA NA 1 958 #> 3741 TCGA-BP-4327-01 1 109 0 109 NA NA 0 109 #> 3742 TCGA-BP-4329-01 1 845 1 845 NA NA 1 134 #> 3743 TCGA-BP-4330-01 0 1888 0 1888 NA NA 0 1888 #> 3744 TCGA-BP-4331-01 1 2454 0 2454 NA NA 0 2454 #> 3745 TCGA-BP-4332-01 0 1133 0 1133 NA NA 0 1133 #> 3746 TCGA-BP-4334-01 1 645 1 645 NA NA 1 442 #> 3747 TCGA-BP-4335-01 1 475 1 475 NA NA 1 160 #> 3748 TCGA-BP-4337-01 1 2 0 2 NA NA 0 2 #> 3749 TCGA-BP-4338-01 0 2859 0 2859 NA NA 1 1757 #> 3750 TCGA-BP-4340-01 1 562 0 562 NA NA 0 562 #> 3751 TCGA-BP-4341-01 1 1589 1 1589 NA NA 1 1589 #> 3752 TCGA-BP-4342-01 1 2256 1 2256 NA NA 1 240 #> 3753 TCGA-BP-4343-01 1 1912 1 1912 NA NA 1 330 #> 3754 TCGA-BP-4344-01 0 1666 0 1666 NA NA 0 1666 #> 3755 TCGA-BP-4345-01 0 1516 0 1516 NA NA 0 1516 #> 3756 TCGA-BP-4346-01 1 1493 0 1493 NA NA 0 1493 #> 3757 TCGA-BP-4347-01 0 1367 0 1367 NA NA 0 1367 #> 3758 TCGA-BP-4349-01 0 372 0 372 NA NA 0 372 #> 3759 TCGA-BP-4351-01 0 970 0 970 NA NA 1 873 #> 3760 TCGA-BP-4352-01 1 344 1 344 NA NA 1 13 #> 3761 TCGA-BP-4353-01 1 375 0 375 NA NA 0 375 #> 3762 TCGA-BP-4355-01 1 953 NA 953 NA NA 0 953 #> 3763 TCGA-BP-4756-01 0 374 0 374 NA NA 0 374 #> 3764 TCGA-BP-4758-01 0 2208 0 2208 NA NA 0 2208 #> 3765 TCGA-BP-4759-01 0 2372 0 2372 NA NA 0 2372 #> 3766 TCGA-BP-4760-01 0 2361 0 2361 NA NA 1 1457 #> 3767 TCGA-BP-4761-01 0 182 0 182 NA NA 0 182 #> 3768 TCGA-BP-4762-01 1 1343 0 1343 NA NA 0 1343 #> 3769 TCGA-BP-4763-01 1 1270 0 1270 NA NA 0 1270 #> 3770 TCGA-BP-4765-01 0 2184 0 2184 NA NA 0 2184 #> 3771 TCGA-BP-4766-01 0 1462 0 1462 NA NA 0 1462 #> 3772 TCGA-BP-4768-01 0 400 0 400 NA NA 0 400 #> 3773 TCGA-BP-4769-01 0 1876 0 1876 NA NA 0 1876 #> 3774 TCGA-BP-4770-01 1 329 1 329 NA NA 1 169 #> 3775 TCGA-BP-4771-01 1 162 1 162 NA NA 1 23 #> 3776 TCGA-BP-4774-01 0 1885 0 1885 NA NA 0 1885 #> 3777 TCGA-BP-4775-01 0 1843 0 1843 NA NA 0 1843 #> 3778 TCGA-BP-4776-01 0 411 0 411 NA NA 0 411 #> 3779 TCGA-BP-4777-01 0 1731 0 1731 NA NA 0 1731 #> 3780 TCGA-BP-4781-01 0 2080 0 2080 NA NA 0 2080 #> 3781 TCGA-BP-4782-01 0 354 0 354 NA NA 0 354 #> 3782 TCGA-BP-4784-01 0 1854 0 1854 NA NA 0 1854 #> 3783 TCGA-BP-4787-01 1 480 1 480 NA NA 1 259 #> 3784 TCGA-BP-4789-01 0 1489 0 1489 NA NA 0 1489 #> 3785 TCGA-BP-4790-01 1 1111 0 1111 NA NA 0 1111 #> 3786 TCGA-BP-4795-01 0 620 0 620 NA NA 0 620 #> 3787 TCGA-BP-4797-01 0 1107 0 1107 NA NA 0 1107 #> 3788 TCGA-BP-4798-01 1 334 1 334 NA NA 1 334 #> 3789 TCGA-BP-4799-01 1 1133 1 1133 NA NA 1 352 #> 3790 TCGA-BP-4801-01 0 1124 0 1124 NA NA 0 1124 #> 3791 TCGA-BP-4803-01 0 204 0 204 NA NA 0 204 #> 3792 TCGA-BP-4804-01 0 1459 0 1459 NA NA 1 295 #> 3793 TCGA-BP-4807-01 0 211 0 211 NA NA 0 211 #> 3794 TCGA-BP-4959-01 0 2660 0 2660 NA NA 0 2660 #> 3795 TCGA-BP-4960-01 0 2172 0 2172 NA NA 0 2172 #> 3796 TCGA-BP-4961-01 0 1935 0 1935 NA NA 0 1935 #> 3797 TCGA-BP-4962-01 0 1785 0 1785 NA NA 0 1785 #> 3798 TCGA-BP-4963-01 0 1834 0 1834 NA NA 0 1834 #> 3799 TCGA-BP-4964-01 0 1862 0 1862 NA NA 0 1862 #> 3800 TCGA-BP-4965-01 0 1871 0 1871 NA NA 0 1871 #> 3801 TCGA-BP-4967-01 0 205 0 205 NA NA 0 205 #> 3802 TCGA-BP-4968-01 0 1746 0 1746 NA NA 0 1746 #> 3803 TCGA-BP-4969-01 0 1794 0 1794 NA NA 0 1794 #> 3804 TCGA-BP-4970-01 0 433 0 433 NA NA 0 433 #> 3805 TCGA-BP-4971-01 0 1487 0 1487 NA NA 0 1487 #> 3806 TCGA-BP-4972-01 0 1502 0 1502 NA NA 0 1502 #> 3807 TCGA-BP-4973-01 0 1384 0 1384 NA NA 0 1384 #> 3808 TCGA-BP-4974-01 1 211 1 211 NA NA 1 35 #> 3809 TCGA-BP-4975-01 0 1433 0 1433 NA NA 0 1433 #> 3810 TCGA-BP-4976-01 0 1632 0 1632 NA NA 0 1632 #> 3811 TCGA-BP-4977-01 0 454 0 454 NA NA 0 454 #> 3812 TCGA-BP-4981-01 1 1097 0 1097 NA NA 0 1097 #> 3813 TCGA-BP-4982-01 0 1014 0 1014 NA NA 0 1014 #> 3814 TCGA-BP-4983-01 0 1413 0 1413 NA NA 0 1413 #> 3815 TCGA-BP-4985-01 1 952 1 952 NA NA 1 205 #> 3816 TCGA-BP-4986-01 0 785 0 785 NA NA 0 785 #> 3817 TCGA-BP-4987-01 0 1124 0 1124 NA NA 0 1124 #> 3818 TCGA-BP-4988-01 1 828 0 828 NA NA 0 828 #> 3819 TCGA-BP-4989-01 0 118 0 118 NA NA 0 118 #> 3820 TCGA-BP-4991-01 0 1413 0 1413 NA NA 0 1413 #> 3821 TCGA-BP-4992-01 0 501 0 501 NA NA 0 501 #> 3822 TCGA-BP-4993-01 0 177 0 177 NA NA 0 177 #> 3823 TCGA-BP-4994-01 0 1308 0 1308 NA NA 0 1308 #> 3824 TCGA-BP-4995-01 0 1371 0 1371 NA NA 0 1371 #> 3825 TCGA-BP-4998-01 0 932 0 932 NA NA 0 932 #> 3826 TCGA-BP-4999-01 0 1266 0 1266 NA NA 0 1266 #> 3827 TCGA-BP-5000-01 0 563 0 563 NA NA 0 563 #> 3828 TCGA-BP-5001-01 0 1177 0 1177 NA NA 0 1177 #> 3829 TCGA-BP-5004-01 0 1126 0 1126 NA NA 0 1126 #> 3830 TCGA-BP-5006-01 0 840 0 840 NA NA 0 840 #> 3831 TCGA-BP-5007-01 0 1140 0 1140 NA NA 0 1140 #> 3832 TCGA-BP-5008-01 0 1071 0 1071 NA NA 0 1071 #> 3833 TCGA-BP-5009-01 1 1092 1 1092 NA NA 1 324 #> 3834 TCGA-BP-5010-01 1 878 1 878 NA NA 1 582 #> 3835 TCGA-BP-5168-01 1 1463 0 1463 NA NA 0 1463 #> 3836 TCGA-BP-5169-01 0 193 0 193 NA NA 0 193 #> 3837 TCGA-BP-5170-01 0 2412 0 2412 NA NA 0 2412 #> 3838 TCGA-BP-5173-01 1 62 0 62 NA NA 0 62 #> 3839 TCGA-BP-5174-01 0 2257 0 2257 NA NA 0 2257 #> 3840 TCGA-BP-5175-01 0 932 0 932 NA NA 0 932 #> 3841 TCGA-BP-5176-01 1 1590 0 1590 NA NA 0 1590 #> 3842 TCGA-BP-5177-01 0 293 0 293 NA NA 0 293 #> 3843 TCGA-BP-5178-01 1 1912 1 1912 NA NA 1 396 #> 3844 TCGA-BP-5180-01 0 2263 0 2263 NA NA 0 2263 #> 3845 TCGA-BP-5181-01 0 1495 0 1495 NA NA 0 1495 #> 3846 TCGA-BP-5182-01 0 1165 0 1165 NA NA 0 1165 #> 3847 TCGA-BP-5183-01 0 1291 0 1291 NA NA 1 485 #> 3848 TCGA-BP-5184-01 0 1133 0 1133 NA NA 0 1133 #> 3849 TCGA-BP-5185-01 0 1132 0 1132 NA NA 1 736 #> 3850 TCGA-BP-5186-01 0 693 0 693 NA NA 0 693 #> 3851 TCGA-BP-5187-01 0 406 0 406 NA NA 0 406 #> 3852 TCGA-BP-5189-01 1 822 1 822 NA NA 1 634 #> 3853 TCGA-BP-5190-01 0 1011 0 1011 NA NA 0 1011 #> 3854 TCGA-BP-5191-01 0 967 0 967 NA NA 0 967 #> 3855 TCGA-BP-5192-01 0 714 0 714 NA NA 0 714 #> 3856 TCGA-BP-5194-01 0 408 0 408 NA NA 0 408 #> 3857 TCGA-BP-5195-01 0 749 0 749 NA NA 0 749 #> 3858 TCGA-BP-5196-01 0 1018 0 1018 NA NA 0 1018 #> 3859 TCGA-BP-5198-01 0 603 0 603 NA NA 0 603 #> 3860 TCGA-BP-5199-01 0 1355 0 1355 NA NA 0 1355 #> 3861 TCGA-BP-5200-01 0 1063 0 1063 NA NA 0 1063 #> 3862 TCGA-BP-5201-01 0 951 0 951 NA NA 1 NA #> 3863 TCGA-BP-5202-01 0 29 0 29 NA NA 0 29 #> 3864 TCGA-CJ-4634-01 0 3498 0 3498 0 3498 0 3498 #> 3865 TCGA-CJ-4635-01 0 1416 0 1416 NA NA 0 1416 #> 3866 TCGA-CJ-4636-01 0 1924 0 1924 NA NA 0 1924 #> 3867 TCGA-CJ-4637-01 1 2227 1 2227 NA NA 1 1821 #> 3868 TCGA-CJ-4638-01 1 431 1 431 NA NA 1 70 #> 3869 TCGA-CJ-4639-01 0 3229 0 3229 0 3229 0 3229 #> 3870 TCGA-CJ-4640-01 0 3480 0 3480 0 3480 0 3480 #> 3871 TCGA-CJ-4641-01 1 1661 1 1661 NA NA 1 NA #> 3872 TCGA-CJ-4642-01 0 3205 0 3205 0 3205 0 3205 #> 3873 TCGA-CJ-4643-01 0 1793 0 1793 NA NA 0 1793 #> 3874 TCGA-CJ-4644-01 1 336 1 336 NA NA 1 93 #> 3875 TCGA-CJ-4868-01 1 646 1 646 NA NA 1 37 #> 3876 TCGA-CJ-4869-01 0 2554 0 2554 NA NA 1 1754 #> 3877 TCGA-CJ-4870-01 0 1498 0 1498 NA NA 0 1498 #> 3878 TCGA-CJ-4871-01 0 2423 0 2423 NA NA 1 169 #> 3879 TCGA-CJ-4872-01 0 1435 0 1435 NA NA 0 1435 #> 3880 TCGA-CJ-4873-01 0 2259 0 2259 NA NA 0 2259 #> 3881 TCGA-CJ-4874-01 0 2283 0 2283 NA NA 0 2283 #> 3882 TCGA-CJ-4875-01 1 3554 1 3554 NA NA 1 531 #> 3883 TCGA-CJ-4876-01 0 1955 0 1955 NA NA 0 1955 #> 3884 TCGA-CJ-4878-01 0 2186 0 2186 NA NA 0 2186 #> 3885 TCGA-CJ-4881-01 0 2014 0 2014 NA NA 1 1881 #> 3886 TCGA-CJ-4882-01 0 1883 0 1883 NA NA 0 1883 #> 3887 TCGA-CJ-4884-01 0 1759 0 1759 NA NA 0 1759 #> 3888 TCGA-CJ-4885-01 0 3451 0 3451 NA NA 1 2041 #> 3889 TCGA-CJ-4886-01 0 1952 0 1952 NA NA 0 1952 #> 3890 TCGA-CJ-4887-01 1 932 1 932 NA NA 1 322 #> 3891 TCGA-CJ-4888-01 1 1567 1 1567 NA NA 1 608 #> 3892 TCGA-CJ-4889-01 0 1946 0 1946 NA NA 0 1946 #> 3893 TCGA-CJ-4890-01 0 3519 0 3519 NA NA 1 70 #> 3894 TCGA-CJ-4891-01 1 819 0 819 NA NA 0 819 #> 3895 TCGA-CJ-4892-01 0 1521 0 1521 NA NA 0 1521 #> 3896 TCGA-CJ-4893-01 0 750 0 750 NA NA 0 750 #> 3897 TCGA-CJ-4894-01 1 841 1 841 NA NA 1 158 #> 3898 TCGA-CJ-4895-01 1 1200 1 1200 NA NA 1 61 #> 3899 TCGA-CJ-4897-01 0 3341 0 3341 1 1423 1 1423 #> 3900 TCGA-CJ-4899-01 0 1528 0 1528 NA NA 0 1528 #> 3901 TCGA-CJ-4900-01 1 1714 1 1714 NA NA 1 1714 #> 3902 TCGA-CJ-4901-01 0 1450 0 1450 NA NA 0 1450 #> 3903 TCGA-CJ-4902-01 0 1520 0 1520 NA NA 0 1520 #> 3904 TCGA-CJ-4903-01 0 1560 0 1560 NA NA 0 1560 #> 3905 TCGA-CJ-4904-01 0 3302 0 3302 NA NA 1 278 #> 3906 TCGA-CJ-4905-01 0 1496 0 1496 NA NA 0 1496 #> 3907 TCGA-CJ-4907-01 0 1499 0 1499 NA NA 0 1499 #> 3908 TCGA-CJ-4908-01 0 1531 0 1531 NA NA 0 1531 #> 3909 TCGA-CJ-4912-01 0 1657 0 1657 NA NA 0 1657 #> 3910 TCGA-CJ-4916-01 0 1373 0 1373 NA NA 0 1373 #> 3911 TCGA-CJ-4918-01 1 93 1 93 NA NA 1 33 #> 3912 TCGA-CJ-4920-01 1 139 0 139 NA NA 0 139 #> 3913 TCGA-CJ-4923-01 1 572 1 572 NA NA 1 25 #> 3914 TCGA-CJ-5671-01 0 3987 0 3987 0 3987 0 3987 #> 3915 TCGA-CJ-5672-01 1 2190 0 2190 NA NA 0 2190 #> 3916 TCGA-CJ-5672-11 1 2190 0 2190 NA NA 0 2190 #> 3917 TCGA-CJ-5675-01 0 3936 0 3936 1 900 1 900 #> 3918 TCGA-CJ-5676-01 0 4067 0 4067 1 2219 1 2219 #> 3919 TCGA-CJ-5676-11 0 4067 0 4067 1 2219 1 2219 #> 3920 TCGA-CJ-5677-01 1 782 1 782 NA NA 1 288 #> 3921 TCGA-CJ-5677-11 1 782 1 782 NA NA 1 288 #> 3922 TCGA-CJ-5678-01 1 574 1 574 NA NA 1 399 #> 3923 TCGA-CJ-5678-11 1 574 1 574 NA NA 1 399 #> 3924 TCGA-CJ-5679-01 1 679 1 679 NA NA 1 595 #> 3925 TCGA-CJ-5679-11 1 679 1 679 NA NA 1 595 #> 3926 TCGA-CJ-5680-01 1 768 1 768 NA NA 1 153 #> 3927 TCGA-CJ-5680-11 1 768 1 768 NA NA 1 153 #> 3928 TCGA-CJ-5681-01 1 552 1 552 NA NA 1 17 #> 3929 TCGA-CJ-5681-11 1 552 1 552 NA NA 1 17 #> 3930 TCGA-CJ-5682-01 0 3736 0 3736 NA NA 1 55 #> 3931 TCGA-CJ-5683-01 0 1889 0 1889 NA NA 0 1889 #> 3932 TCGA-CJ-5684-01 0 2231 0 2231 NA NA 0 2231 #> 3933 TCGA-CJ-5686-01 0 2038 0 2038 NA NA 0 2038 #> 3934 TCGA-CJ-5689-01 1 1620 0 1620 NA NA 0 1620 #> 3935 TCGA-CJ-5689-11 1 1620 0 1620 NA NA 0 1620 #> 3936 TCGA-CJ-6027-01 1 3615 0 3615 0 3615 0 3615 #> 3937 TCGA-CJ-6028-01 1 1625 1 1625 NA NA 1 137 #> 3938 TCGA-CJ-6030-01 1 2299 0 2299 NA NA 0 2299 #> 3939 TCGA-CJ-6030-11 1 2299 0 2299 NA NA 0 2299 #> 3940 TCGA-CJ-6031-01 0 1906 0 1906 NA NA 0 1906 #> 3941 TCGA-CJ-6032-01 0 3639 0 3639 0 3639 0 3639 #> 3942 TCGA-CJ-6033-01 1 224 1 224 NA NA 1 144 #> 3943 TCGA-CJ-6033-11 1 224 1 224 NA NA 1 144 #> 3944 TCGA-CW-5580-01 1 1964 NA 1964 NA NA 0 1964 #> 3945 TCGA-CW-5580-11 1 1964 NA 1964 NA NA 0 1964 #> 3946 TCGA-CW-5581-01 0 2799 0 2799 NA NA 0 2799 #> 3947 TCGA-CW-5581-11 0 2799 0 2799 NA NA 0 2799 #> 3948 TCGA-CW-5583-01 0 2489 0 2489 NA NA 0 2489 #> 3949 TCGA-CW-5584-01 1 164 NA 164 NA NA 1 102 #> 3950 TCGA-CW-5584-11 1 164 NA 164 NA NA 1 102 #> 3951 TCGA-CW-5585-01 0 2609 0 2609 NA NA 0 2609 #> 3952 TCGA-CW-5585-11 0 2609 0 2609 NA NA 0 2609 #> 3953 TCGA-CW-5587-01 0 2226 0 2226 NA NA 1 2003 #> 3954 TCGA-CW-5587-11 0 2226 0 2226 NA NA 1 2003 #> 3955 TCGA-CW-5588-01 0 2017 0 2017 NA NA 0 2017 #> 3956 TCGA-CW-5589-01 0 2378 0 2378 NA NA 0 2378 #> 3957 TCGA-CW-5589-11 0 2378 0 2378 NA NA 0 2378 #> 3958 TCGA-CW-5590-01 1 1075 NA 1075 NA NA 1 672 #> 3959 TCGA-CW-5591-01 0 2271 0 2271 NA NA 0 2271 #> 3960 TCGA-CW-5591-11 0 2271 0 2271 NA NA 0 2271 #> 3961 TCGA-CW-6087-01 1 41 0 41 NA NA 0 41 #> 3962 TCGA-CW-6087-11 1 41 0 41 NA NA 0 41 #> 3963 TCGA-CW-6088-01 0 3222 0 3222 NA NA 0 3222 #> 3964 TCGA-CW-6088-11 0 3222 0 3222 NA NA 0 3222 #> 3965 TCGA-CW-6090-01 0 2552 0 2552 NA NA 1 2780 #> 3966 TCGA-CW-6090-11 0 2552 0 2552 NA NA 1 2780 #> 3967 TCGA-CW-6093-01 0 3146 0 3146 NA NA 0 3146 #> 3968 TCGA-CW-6097-01 1 571 1 571 NA NA 1 457 #> 3969 TCGA-CZ-4853-01 0 774 0 774 NA NA 0 774 #> 3970 TCGA-CZ-4854-01 1 1404 0 1404 NA NA 0 1404 #> 3971 TCGA-CZ-4856-01 0 18 0 18 NA NA 0 18 #> 3972 TCGA-CZ-4857-01 1 1432 1 1432 NA NA 1 188 #> 3973 TCGA-CZ-4858-01 1 2105 1 2105 NA NA 1 597 #> 3974 TCGA-CZ-4859-01 0 1787 0 1787 NA NA 0 1787 #> 3975 TCGA-CZ-4860-01 1 206 1 206 NA NA 1 206 #> 3976 TCGA-CZ-4861-01 1 446 1 446 NA NA 1 446 #> 3977 TCGA-CZ-4862-01 0 3271 0 3271 NA NA 0 3271 #> 3978 TCGA-CZ-4863-01 0 1928 0 1928 NA NA 0 1928 #> 3979 TCGA-CZ-4863-11 0 1928 0 1928 NA NA 0 1928 #> 3980 TCGA-CZ-4864-01 1 2830 0 2830 NA NA 0 2830 #> 3981 TCGA-CZ-4864-11 1 2830 0 2830 NA NA 0 2830 #> 3982 TCGA-CZ-4865-01 1 166 0 166 NA NA 0 166 #> 3983 TCGA-CZ-4865-11 1 166 0 166 NA NA 0 166 #> 3984 TCGA-CZ-4866-01 0 3267 0 3267 NA NA 0 3267 #> 3985 TCGA-CZ-5451-01 0 1929 0 1929 NA NA 0 1929 #> 3986 TCGA-CZ-5451-11 0 1929 0 1929 NA NA 0 1929 #> 3987 TCGA-CZ-5452-01 0 1789 0 1789 NA NA 0 1789 #> 3988 TCGA-CZ-5452-11 0 1789 0 1789 NA NA 0 1789 #> 3989 TCGA-CZ-5453-01 1 2419 NA 2419 NA NA 0 2419 #> 3990 TCGA-CZ-5453-11 1 2419 NA 2419 NA NA 0 2419 #> 3991 TCGA-CZ-5454-01 1 722 1 722 NA NA 1 423 #> 3992 TCGA-CZ-5454-11 1 722 1 722 NA NA 1 423 #> 3993 TCGA-CZ-5455-01 1 561 1 561 NA NA 1 561 #> 3994 TCGA-CZ-5455-11 1 561 1 561 NA NA 1 561 #> 3995 TCGA-CZ-5456-01 0 2422 0 2422 NA NA 1 951 #> 3996 TCGA-CZ-5456-11 0 2422 0 2422 NA NA 1 951 #> 3997 TCGA-CZ-5457-01 0 2754 0 2754 NA NA 1 174 #> 3998 TCGA-CZ-5457-11 0 2754 0 2754 NA NA 1 174 #> 3999 TCGA-CZ-5458-01 0 2789 0 2789 NA NA 0 2789 #> 4000 TCGA-CZ-5458-11 0 2789 0 2789 NA NA 0 2789 #> 4001 TCGA-CZ-5459-01 0 1683 0 1683 NA NA 0 1683 #> 4002 TCGA-CZ-5460-01 0 2873 0 2873 NA NA 0 2873 #> 4003 TCGA-CZ-5461-01 1 330 1 330 NA NA 1 48 #> 4004 TCGA-CZ-5461-11 1 330 1 330 NA NA 1 48 #> 4005 TCGA-CZ-5462-01 1 311 1 311 NA NA 1 311 #> 4006 TCGA-CZ-5462-11 1 311 1 311 NA NA 1 311 #> 4007 TCGA-CZ-5463-01 0 662 0 662 NA NA 0 662 #> 4008 TCGA-CZ-5463-11 0 662 0 662 NA NA 0 662 #> 4009 TCGA-CZ-5464-01 0 2128 0 2128 NA NA 0 2128 #> 4010 TCGA-CZ-5465-01 1 2564 0 2564 NA NA 0 2564 #> 4011 TCGA-CZ-5465-11 1 2564 0 2564 NA NA 0 2564 #> 4012 TCGA-CZ-5466-01 0 685 0 685 NA NA 0 685 #> 4013 TCGA-CZ-5466-11 0 685 0 685 NA NA 0 685 #> 4014 TCGA-CZ-5467-01 1 73 1 73 NA NA 1 62 #> 4015 TCGA-CZ-5467-11 1 73 1 73 NA NA 1 62 #> 4016 TCGA-CZ-5468-01 1 59 1 59 NA NA 1 59 #> 4017 TCGA-CZ-5468-11 1 59 1 59 NA NA 1 59 #> 4018 TCGA-CZ-5469-01 1 946 1 946 NA NA 1 110 #> 4019 TCGA-CZ-5469-11 1 946 1 946 NA NA 1 110 #> 4020 TCGA-CZ-5470-01 0 386 0 386 NA NA 0 386 #> 4021 TCGA-CZ-5470-11 0 386 0 386 NA NA 0 386 #> 4022 TCGA-CZ-5982-01 0 2439 0 2439 NA NA 0 2439 #> 4023 TCGA-CZ-5982-11 0 2439 0 2439 NA NA 0 2439 #> 4024 TCGA-CZ-5984-01 0 2067 0 2067 NA NA 0 2067 #> 4025 TCGA-CZ-5984-11 0 2067 0 2067 NA NA 0 2067 #> 4026 TCGA-CZ-5985-01 0 1997 0 1997 NA NA 0 1997 #> 4027 TCGA-CZ-5985-11 0 1997 0 1997 NA NA 0 1997 #> 4028 TCGA-CZ-5986-01 0 373 0 373 NA NA 0 373 #> 4029 TCGA-CZ-5986-11 0 373 0 373 NA NA 0 373 #> 4030 TCGA-CZ-5987-01 1 445 1 445 NA NA 1 377 #> 4031 TCGA-CZ-5987-11 1 445 1 445 NA NA 1 377 #> 4032 TCGA-CZ-5988-01 0 693 0 693 NA NA 0 693 #> 4033 TCGA-CZ-5988-11 0 693 0 693 NA NA 0 693 #> 4034 TCGA-CZ-5989-01 0 1905 0 1905 NA NA 0 1905 #> 4035 TCGA-CZ-5989-11 0 1905 0 1905 NA NA 0 1905 #> 4036 TCGA-DV-5565-01 0 1329 0 1329 NA NA 0 1329 #> 4037 TCGA-DV-5566-01 0 1398 0 1398 NA NA 0 1398 #> 4038 TCGA-DV-5567-01 0 2004 0 2004 1 2004 1 2004 #> 4039 TCGA-DV-5568-01 0 370 0 370 NA NA 0 370 #> 4040 TCGA-DV-5569-01 0 355 0 355 NA NA 0 355 #> 4041 TCGA-DV-5573-01 0 1130 0 1130 NA NA 0 1130 #> 4042 TCGA-DV-5574-01 0 2016 0 2016 1 357 1 357 #> 4043 TCGA-DV-5575-01 0 1729 0 1729 NA NA 0 1729 #> 4044 TCGA-DV-5576-01 1 727 1 727 NA NA 1 727 #> 4045 TCGA-DV-A4VX-01 1 1626 1 1626 NA NA 1 1626 #> 4046 TCGA-DV-A4VZ-01 0 365 0 365 0 365 0 365 #> 4047 TCGA-DV-A4W0-05 0 2470 0 2470 NA NA 1 2008 #> 4048 TCGA-DV-A4W0-01 0 2470 0 2470 NA NA 1 2008 #> 4049 TCGA-EU-5904-01 0 551 0 551 NA NA 0 551 #> 4050 TCGA-EU-5905-01 0 119 0 119 NA NA 0 119 #> 4051 TCGA-EU-5906-01 0 206 0 206 NA NA 0 206 #> 4052 TCGA-EU-5907-01 0 127 0 127 NA NA 0 127 #> 4053 TCGA-G6-A5PC-01 1 242 1 242 NA NA 1 242 #> 4054 TCGA-G6-A8L6-01 1 313 1 313 NA NA 1 304 #> 4055 TCGA-G6-A8L7-01 0 2133 0 2133 0 2133 0 2133 #> 4056 TCGA-G6-A8L8-01 1 1091 0 1091 0 1091 0 1091 #> 4057 TCGA-GK-A6C7-01 0 61 0 61 0 61 0 61 #> 4058 TCGA-MM-A563-01 0 591 0 591 0 591 0 591 #> 4059 TCGA-MM-A564-01 0 607 0 607 0 607 0 607 #> 4060 TCGA-MM-A84U-01 0 700 0 700 0 700 0 700 #> 4061 TCGA-MW-A4EC-01 0 498 0 498 0 498 0 498 #> 4062 TCGA-T7-A92I-01 0 356 0 356 0 356 0 356 #> 4063 TCGA-2K-A9WE-01 0 214 0 214 0 214 0 214 #> 4064 TCGA-2Z-A9J1-01 0 2298 0 2298 0 2298 0 2298 #> 4065 TCGA-2Z-A9J2-01 0 1795 0 1795 0 1795 0 1795 #> 4066 TCGA-2Z-A9J3-01 1 1771 1 1771 NA NA 1 790 #> 4067 TCGA-2Z-A9J5-01 0 3050 0 3050 NA NA 0 3050 #> 4068 TCGA-2Z-A9J6-01 0 1731 0 1731 NA NA 0 1731 #> 4069 TCGA-2Z-A9J7-01 1 139 1 139 NA NA 1 96 #> 4070 TCGA-2Z-A9J8-01 0 2790 0 2790 1 506 1 506 #> 4071 TCGA-2Z-A9J9-01 0 2294 0 2294 0 2294 0 2294 #> 4072 TCGA-2Z-A9JD-01 0 1060 0 1060 NA NA 0 1060 #> 4073 TCGA-2Z-A9JE-01 0 1728 0 1728 0 1728 0 1728 #> 4074 TCGA-2Z-A9JG-01 0 1662 0 1662 0 1662 0 1662 #> 4075 TCGA-2Z-A9JI-01 0 1567 0 1567 1 286 1 286 #> 4076 TCGA-2Z-A9JJ-01 0 1213 0 1213 0 1213 0 1213 #> 4077 TCGA-2Z-A9JK-01 0 1186 0 1186 NA NA 1 324 #> 4078 TCGA-2Z-A9JL-01 0 1006 0 1006 0 1006 0 1006 #> 4079 TCGA-2Z-A9JM-01 0 934 0 934 NA NA 0 934 #> 4080 TCGA-2Z-A9JN-01 0 740 0 740 0 740 0 740 #> 4081 TCGA-2Z-A9JO-01 0 949 0 949 0 949 0 949 #> 4082 TCGA-2Z-A9JP-01 0 893 0 893 0 893 0 893 #> 4083 TCGA-2Z-A9JQ-01 0 778 0 778 NA NA 1 600 #> 4084 TCGA-2Z-A9JR-01 0 161 0 161 NA NA 0 161 #> 4085 TCGA-2Z-A9JS-01 1 492 0 492 0 492 0 492 #> 4086 TCGA-2Z-A9JT-01 0 684 0 684 0 684 0 684 #> 4087 TCGA-4A-A93W-01 0 4 0 4 0 4 0 4 #> 4088 TCGA-4A-A93X-01 0 390 0 390 NA NA 0 390 #> 4089 TCGA-4A-A93Y-01 0 352 0 352 0 352 0 352 #> 4090 TCGA-5P-A9JU-01 0 373 0 373 0 373 0 373 #> 4091 TCGA-5P-A9JV-01 0 2043 0 2043 0 2043 0 2043 #> 4092 TCGA-5P-A9JW-01 0 3241 0 3241 1 3228 1 3228 #> 4093 TCGA-5P-A9JY-01 1 1508 0 1508 0 1508 0 1508 #> 4094 TCGA-5P-A9JZ-01 0 2744 0 2744 0 2744 0 2744 #> 4095 TCGA-5P-A9K0-01 0 677 0 677 NA NA 0 677 #> 4096 TCGA-5P-A9K2-01 0 2392 0 2392 0 2392 0 2392 #> 4097 TCGA-5P-A9K3-01 1 471 1 471 NA NA 1 17 #> 4098 TCGA-5P-A9K4-01 0 2184 0 2184 0 2184 0 2184 #> 4099 TCGA-5P-A9K6-01 0 1914 0 1914 0 1914 0 1914 #> 4100 TCGA-5P-A9K8-01 0 1309 0 1309 0 1309 0 1309 #> 4101 TCGA-5P-A9K9-01 1 589 1 589 1 548 1 548 #> 4102 TCGA-5P-A9KA-01 0 395 0 395 0 395 0 395 #> 4103 TCGA-5P-A9KC-01 0 377 0 377 0 377 0 377 #> 4104 TCGA-5P-A9KE-01 0 824 0 824 0 824 0 824 #> 4105 TCGA-5P-A9KF-01 0 845 0 845 NA NA 1 728 #> 4106 TCGA-5P-A9KH-01 0 2051 0 2051 0 2051 0 2051 #> 4107 TCGA-A4-7286-01 0 554 0 554 0 554 0 554 #> 4108 TCGA-A4-7287-01 1 597 1 597 1 234 1 234 #> 4109 TCGA-A4-7288-01 0 1857 0 1857 0 1857 0 1857 #> 4110 TCGA-A4-7583-01 0 3 0 3 NA NA 0 3 #> 4111 TCGA-A4-7584-01 0 650 0 650 0 650 0 650 #> 4112 TCGA-A4-7585-01 1 1070 0 1070 0 1070 0 1070 #> 4113 TCGA-A4-7732-01 0 582 0 582 0 582 0 582 #> 4114 TCGA-A4-7734-01 0 27 0 27 NA NA 0 27 #> 4115 TCGA-A4-7828-01 0 238 0 238 0 238 0 238 #> 4116 TCGA-A4-7915-01 0 7 0 7 NA NA 0 7 #> 4117 TCGA-A4-7997-01 0 927 0 927 NA NA 0 927 #> 4118 TCGA-A4-8098-01 0 896 0 896 0 896 0 896 #> 4119 TCGA-A4-8310-01 0 780 0 780 0 780 0 780 #> 4120 TCGA-A4-8311-01 0 729 0 729 0 729 0 729 #> 4121 TCGA-A4-8312-01 0 708 0 708 0 708 0 708 #> 4122 TCGA-A4-8515-01 0 709 0 709 0 709 0 709 #> 4123 TCGA-A4-8516-01 0 23 0 23 NA NA 0 23 #> 4124 TCGA-A4-8517-01 0 597 0 597 0 597 0 597 #> 4125 TCGA-A4-8630-01 0 436 0 436 0 436 0 436 #> 4126 TCGA-A4-A48D-01 0 379 0 379 0 379 0 379 #> 4127 TCGA-A4-A4ZT-01 0 516 0 516 0 516 0 516 #> 4128 TCGA-A4-A4ZT-11 0 516 0 516 0 516 0 516 #> 4129 TCGA-A4-A57E-01 1 258 1 258 NA NA 1 258 #> 4130 TCGA-A4-A57E-11 1 258 1 258 NA NA 1 258 #> 4131 TCGA-A4-A5DU-01 0 496 0 496 0 496 0 496 #> 4132 TCGA-A4-A5XZ-01 0 479 0 479 0 479 0 479 #> 4133 TCGA-A4-A5Y0-01 0 252 0 252 0 252 0 252 #> 4134 TCGA-A4-A5Y1-01 1 395 1 395 1 296 1 296 #> 4135 TCGA-A4-A6HP-01 0 379 0 379 0 379 0 379 #> 4136 TCGA-A4-A772-01 0 0 0 0 NA NA 0 0 #> 4137 TCGA-A4-A7UZ-01 0 0 0 0 NA NA 0 0 #> 4138 TCGA-AL-3466-01 1 293 1 293 NA NA 1 138 #> 4139 TCGA-AL-3467-01 0 2135 0 2135 0 2135 0 2135 #> 4140 TCGA-AL-3468-01 1 2331 0 2331 0 2331 0 2331 #> 4141 TCGA-AL-3471-01 1 1500 0 1500 NA NA 0 1500 #> 4142 TCGA-AL-3472-01 0 2029 0 2029 0 2029 0 2029 #> 4143 TCGA-AL-3473-01 0 1906 0 1906 0 1906 0 1906 #> 4144 TCGA-AL-7173-01 0 2060 0 2060 NA NA 1 332 #> 4145 TCGA-AL-A5DJ-01 1 1498 1 1498 NA NA 1 1498 #> 4146 TCGA-AT-A5NU-01 0 67 0 67 NA NA 0 67 #> 4147 TCGA-B1-5398-01 0 1251 0 1251 0 1251 0 1251 #> 4148 TCGA-B1-7332-01 0 1141 0 1141 0 1141 0 1141 #> 4149 TCGA-B1-A47M-01 0 659 0 659 NA NA 1 408 #> 4150 TCGA-B1-A47N-01 0 1110 0 1110 0 1110 0 1110 #> 4151 TCGA-B1-A47O-01 0 842 0 842 0 842 0 842 #> 4152 TCGA-B1-A654-01 0 616 0 616 0 616 0 616 #> 4153 TCGA-B1-A655-01 0 510 0 510 0 510 0 510 #> 4154 TCGA-B1-A656-01 0 618 0 618 0 618 0 618 #> 4155 TCGA-B1-A657-01 0 641 0 641 0 641 0 641 #> 4156 TCGA-B3-3925-01 0 1029 0 1029 0 1029 0 1029 #> 4157 TCGA-B3-3926-01 0 883 0 883 0 883 0 883 #> 4158 TCGA-B3-4103-01 0 930 0 930 0 930 0 930 #> 4159 TCGA-B3-4104-01 0 1049 0 1049 NA NA 0 1049 #> 4160 TCGA-B3-8121-01 0 379 0 379 0 379 0 379 #> 4161 TCGA-B3-A6W5-01 0 309 0 309 0 309 0 309 #> 4162 TCGA-B9-4113-01 1 1536 0 1536 NA NA 0 1536 #> 4163 TCGA-B9-4114-01 0 857 0 857 NA NA 1 637 #> 4164 TCGA-B9-4115-01 0 803 0 803 NA NA 0 803 #> 4165 TCGA-B9-4115-11 0 803 0 803 NA NA 0 803 #> 4166 TCGA-B9-4116-01 0 627 0 627 NA NA 0 627 #> 4167 TCGA-B9-4117-01 0 14 0 14 NA NA 0 14 #> 4168 TCGA-B9-4617-01 0 35 0 35 NA NA 0 35 #> 4169 TCGA-B9-5155-01 0 665 0 665 0 665 0 665 #> 4170 TCGA-B9-5156-01 0 1338 0 1338 0 1338 0 1338 #> 4171 TCGA-B9-7268-01 0 671 0 671 0 671 0 671 #> 4172 TCGA-B9-A44B-01 0 361 0 361 NA NA 0 361 #> 4173 TCGA-B9-A5W7-01 0 585 0 585 1 564 1 564 #> 4174 TCGA-B9-A5W8-01 0 524 0 524 0 524 0 524 #> 4175 TCGA-B9-A5W9-01 0 5 0 5 0 5 0 5 #> 4176 TCGA-B9-A69E-01 0 452 0 452 0 452 0 452 #> 4177 TCGA-B9-A8YH-01 0 532 0 532 0 532 0 532 #> 4178 TCGA-B9-A8YI-01 0 374 0 374 0 374 0 374 #> 4179 TCGA-BQ-5875-01 0 2639 0 2639 NA NA 0 2639 #> 4180 TCGA-BQ-5875-11 0 2639 0 2639 NA NA 0 2639 #> 4181 TCGA-BQ-5876-01 0 586 0 586 NA NA 0 586 #> 4182 TCGA-BQ-5877-01 1 270 1 270 NA NA 1 127 #> 4183 TCGA-BQ-5877-11 1 270 1 270 NA NA 1 127 #> 4184 TCGA-BQ-5878-01 0 1938 0 1938 NA NA 1 1022 #> 4185 TCGA-BQ-5878-11 0 1938 0 1938 NA NA 1 1022 #> 4186 TCGA-BQ-5879-01 1 697 1 697 NA NA 1 130 #> 4187 TCGA-BQ-5879-11 1 697 1 697 NA NA 1 130 #> 4188 TCGA-BQ-5880-01 1 1314 1 1314 NA NA 1 972 #> 4189 TCGA-BQ-5881-01 0 1454 0 1454 NA NA 0 1454 #> 4190 TCGA-BQ-5882-01 1 658 1 658 NA NA 1 340 #> 4191 TCGA-BQ-5882-11 1 658 1 658 NA NA 1 340 #> 4192 TCGA-BQ-5883-01 0 1242 0 1242 NA NA 0 1242 #> 4193 TCGA-BQ-5884-01 0 792 0 792 NA NA 0 792 #> 4194 TCGA-BQ-5884-11 0 792 0 792 NA NA 0 792 #> 4195 TCGA-BQ-5885-01 0 921 0 921 NA NA 0 921 #> 4196 TCGA-BQ-5886-01 0 792 0 792 NA NA 0 792 #> 4197 TCGA-BQ-5887-01 0 771 0 771 NA NA 0 771 #> 4198 TCGA-BQ-5887-11 0 771 0 771 NA NA 0 771 #> 4199 TCGA-BQ-5888-01 0 403 0 403 NA NA 0 403 #> 4200 TCGA-BQ-5888-11 0 403 0 403 NA NA 0 403 #> 4201 TCGA-BQ-5889-01 1 329 1 329 NA NA 1 NA #> 4202 TCGA-BQ-5890-01 0 233 0 233 NA NA 0 233 #> 4203 TCGA-BQ-5890-11 0 233 0 233 NA NA 0 233 #> 4204 TCGA-BQ-5891-01 0 29 0 29 NA NA 0 29 #> 4205 TCGA-BQ-5891-11 0 29 0 29 NA NA 0 29 #> 4206 TCGA-BQ-5892-01 0 364 0 364 NA NA 0 364 #> 4207 TCGA-BQ-5893-01 1 241 1 241 NA NA 1 188 #> 4208 TCGA-BQ-5894-01 0 84 0 84 NA NA 0 84 #> 4209 TCGA-BQ-5894-11 0 84 0 84 NA NA 0 84 #> 4210 TCGA-BQ-7044-01 0 3760 0 3760 NA NA 0 3760 #> 4211 TCGA-BQ-7044-11 0 3760 0 3760 NA NA 0 3760 #> 4212 TCGA-BQ-7045-01 1 1468 0 1468 NA NA 0 1468 #> 4213 TCGA-BQ-7045-11 1 1468 0 1468 NA NA 0 1468 #> 4214 TCGA-BQ-7046-01 0 2948 0 2948 NA NA 0 2948 #> 4215 TCGA-BQ-7046-11 0 2948 0 2948 NA NA 0 2948 #> 4216 TCGA-BQ-7048-01 0 2839 0 2839 NA NA 1 229 #> 4217 TCGA-BQ-7049-01 1 1364 0 1364 NA NA 0 1364 #> 4218 TCGA-BQ-7050-01 0 1864 0 1864 NA NA 0 1864 #> 4219 TCGA-BQ-7051-01 0 1533 0 1533 NA NA 0 1533 #> 4220 TCGA-BQ-7051-11 0 1533 0 1533 NA NA 0 1533 #> 4221 TCGA-BQ-7053-01 0 1516 0 1516 NA NA 0 1516 #> 4222 TCGA-BQ-7055-01 0 799 0 799 NA NA 0 799 #> 4223 TCGA-BQ-7055-11 0 799 0 799 NA NA 0 799 #> 4224 TCGA-BQ-7056-01 0 612 0 612 NA NA 1 143 #> 4225 TCGA-BQ-7058-01 1 343 1 343 NA NA 1 50 #> 4226 TCGA-BQ-7059-01 0 232 0 232 NA NA 0 232 #> 4227 TCGA-BQ-7059-11 0 232 0 232 NA NA 0 232 #> 4228 TCGA-BQ-7060-01 0 214 0 214 NA NA 0 214 #> 4229 TCGA-BQ-7061-01 0 218 0 218 NA NA 0 218 #> 4230 TCGA-BQ-7061-11 0 218 0 218 NA NA 0 218 #> 4231 TCGA-BQ-7062-01 0 116 0 116 NA NA 0 116 #> 4232 TCGA-DW-5560-01 0 1486 0 1486 0 1486 0 1486 #> 4233 TCGA-DW-5561-01 0 414 0 414 NA NA 0 414 #> 4234 TCGA-DW-7834-01 0 3950 0 3950 NA NA 0 3950 #> 4235 TCGA-DW-7836-01 0 1093 0 1093 NA NA 0 1093 #> 4236 TCGA-DW-7837-01 0 1142 0 1142 NA NA 0 1142 #> 4237 TCGA-DW-7838-01 0 744 0 744 NA NA 1 380 #> 4238 TCGA-DW-7839-01 0 419 0 419 NA NA 0 419 #> 4239 TCGA-DW-7840-01 0 114 0 114 NA NA 0 114 #> 4240 TCGA-DW-7841-01 0 445 0 445 NA NA 0 445 #> 4241 TCGA-DW-7842-01 0 92 0 92 NA NA 0 92 #> 4242 TCGA-DW-7963-01 0 1240 0 1240 0 1240 0 1240 #> 4243 TCGA-DZ-6131-01 0 2429 0 2429 NA NA 0 2429 #> 4244 TCGA-DZ-6131-11 0 2429 0 2429 NA NA 0 2429 #> 4245 TCGA-DZ-6132-01 0 2460 0 2460 NA NA 0 2460 #> 4246 TCGA-DZ-6132-11 0 2460 0 2460 NA NA 0 2460 #> 4247 TCGA-DZ-6133-01 1 1557 0 1557 NA NA 0 1557 #> 4248 TCGA-DZ-6133-11 1 1557 0 1557 NA NA 0 1557 #> 4249 TCGA-DZ-6134-01 0 1856 0 1856 NA NA 0 1856 #> 4250 TCGA-DZ-6134-11 0 1856 0 1856 NA NA 0 1856 #> 4251 TCGA-DZ-6135-01 0 2269 0 2269 NA NA 0 2269 #> 4252 TCGA-EV-5901-01 0 1040 0 1040 NA NA 0 1040 #> 4253 TCGA-EV-5902-01 0 578 0 578 NA NA 0 578 #> 4254 TCGA-EV-5903-01 0 757 0 757 NA NA 0 757 #> 4255 TCGA-F9-A4JJ-01 1 325 1 325 NA NA 1 109 #> 4256 TCGA-F9-A7Q0-01 0 398 0 398 0 398 0 398 #> 4257 TCGA-F9-A7VF-01 0 73 0 73 0 73 0 73 #> 4258 TCGA-F9-A8NY-01 0 36 0 36 NA NA 0 36 #> 4259 TCGA-F9-A97G-01 0 13 0 13 0 13 0 13 #> 4260 TCGA-G7-6789-01 1 122 1 122 NA NA 1 122 #> 4261 TCGA-G7-6790-01 0 1575 0 1575 NA NA 1 1558 #> 4262 TCGA-G7-6792-01 0 2765 0 2765 0 2765 0 2765 #> 4263 TCGA-G7-6793-01 1 336 1 336 NA NA 1 336 #> 4264 TCGA-G7-6795-01 0 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TCGA-IZ-8196-01 0 649 0 649 0 649 0 649 #> 4306 TCGA-IZ-A6M8-01 0 497 0 497 0 497 0 497 #> 4307 TCGA-IZ-A6M9-01 0 376 0 376 0 376 0 376 #> 4308 TCGA-J7-6720-01 0 388 0 388 0 388 0 388 #> 4309 TCGA-J7-8537-01 1 321 1 321 1 220 1 220 #> 4310 TCGA-J7-A8I2-01 0 307 0 307 1 268 1 268 #> 4311 TCGA-KV-A6GD-01 0 560 0 560 0 560 0 560 #> 4312 TCGA-KV-A6GE-01 0 885 0 885 0 885 0 885 #> 4313 TCGA-KV-A74V-01 0 347 0 347 0 347 0 347 #> 4314 TCGA-MH-A55W-01 0 1043 0 1043 0 1043 0 1043 #> 4315 TCGA-MH-A55Z-01 0 845 0 845 0 845 0 845 #> 4316 TCGA-MH-A560-01 0 924 0 924 0 924 0 924 #> 4317 TCGA-MH-A561-01 0 841 0 841 0 841 0 841 #> 4318 TCGA-MH-A562-01 0 616 0 616 0 616 0 616 #> 4319 TCGA-MH-A854-01 0 536 0 536 0 536 0 536 #> 4320 TCGA-MH-A855-01 0 369 0 369 1 0 1 0 #> 4321 TCGA-MH-A856-01 0 947 0 947 0 947 0 947 #> 4322 TCGA-MH-A857-01 0 890 0 890 NA NA 0 890 #> 4323 TCGA-O9-A75Z-01 0 471 0 471 NA NA 0 471 #> 4324 TCGA-P4-A5E6-01 0 3035 0 3035 0 3035 0 3035 #> 4325 TCGA-P4-A5E7-01 0 2649 0 2649 0 2649 0 2649 #> 4326 TCGA-P4-A5E8-01 1 1306 1 1306 NA NA 1 42 #> 4327 TCGA-P4-A5E8-11 1 1306 1 1306 NA NA 1 42 #> 4328 TCGA-P4-A5EA-01 1 201 1 201 1 44 1 44 #> 4329 TCGA-P4-A5EB-01 0 3015 0 3015 0 3015 0 3015 #> 4330 TCGA-P4-A5ED-01 0 2816 0 2816 0 2816 0 2816 #> 4331 TCGA-P4-A5ED-11 0 2816 0 2816 0 2816 0 2816 #> 4332 TCGA-P4-AAVK-01 0 1590 0 1590 1 232 1 232 #> 4333 TCGA-P4-AAVL-01 1 487 1 487 1 41 1 41 #> 4334 TCGA-P4-AAVM-01 0 1539 0 1539 0 1539 0 1539 #> 4335 TCGA-P4-AAVO-01 0 2400 0 2400 0 2400 0 2400 #> 4336 TCGA-PJ-A5Z8-01 0 600 0 600 0 600 0 600 #> 4337 TCGA-PJ-A5Z9-01 0 540 0 540 0 540 0 540 #> 4338 TCGA-Q2-A5QZ-01 0 428 0 428 1 412 1 412 #> 4339 TCGA-SX-A71R-01 0 1457 0 1457 0 1457 0 1457 #> 4340 TCGA-SX-A71S-01 0 1504 0 1504 0 1504 0 1504 #> 4341 TCGA-SX-A71U-01 0 1357 0 1357 0 1357 0 1357 #> 4342 TCGA-SX-A71V-01 0 876 0 876 0 876 0 876 #> 4343 TCGA-SX-A71W-01 0 1076 0 1076 0 1076 0 1076 #> 4344 TCGA-SX-A7SL-01 0 823 0 823 0 823 0 823 #> 4345 TCGA-SX-A7SM-01 1 363 1 363 NA NA 1 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4554 TCGA-AB-3009-03 1 577 NA NA NA NA NA NA #> 4555 TCGA-AB-3011-03 0 1885 0 NA NA NA NA NA #> 4556 TCGA-AB-3012-03 0 1887 0 NA NA NA NA NA #> 4557 TCGA-CS-4938-01 0 3574 0 3574 NA NA 0 3574 #> 4558 TCGA-CS-4941-01 1 234 1 234 NA NA 1 9 #> 4559 TCGA-CS-4942-01 1 1335 1 1335 NA NA 1 1184 #> 4560 TCGA-CS-4943-01 1 1106 1 1106 NA NA 1 1106 #> 4561 TCGA-CS-4944-01 0 1828 0 1828 NA NA 0 1828 #> 4562 TCGA-CS-5390-01 0 NA 0 NA 0 NA 0 NA #> 4563 TCGA-CS-5393-01 0 1222 0 1222 0 1222 0 1222 #> 4564 TCGA-CS-5394-01 0 8 0 8 NA NA 0 8 #> 4565 TCGA-CS-5395-01 1 639 1 639 NA NA 1 287 #> 4566 TCGA-CS-5396-01 0 1631 0 1631 NA NA 0 1631 #> 4567 TCGA-CS-5397-01 1 194 1 194 NA NA 1 194 #> 4568 TCGA-CS-6186-01 1 538 1 538 NA NA 1 188 #> 4569 TCGA-CS-6188-01 1 814 1 814 NA NA 1 647 #> 4570 TCGA-CS-6290-01 1 1137 NA 1137 NA NA 0 1137 #> 4571 TCGA-CS-6666-01 0 1428 0 1428 NA NA 0 1428 #> 4572 TCGA-CS-6667-01 0 1469 0 1469 NA NA 0 1469 #> 4573 TCGA-CS-6668-01 0 1519 0 1519 NA NA 0 1519 #> 4574 TCGA-CS-6669-01 0 1494 0 1494 NA NA 0 1494 #> 4575 TCGA-CS-6670-01 0 1426 0 1426 NA NA 0 1426 #> 4576 TCGA-DB-5270-01 0 3733 0 3733 0 3733 0 3733 #> 4577 TCGA-DB-5273-01 0 2493 0 2493 0 2493 0 2493 #> 4578 TCGA-DB-5274-01 0 2289 0 2289 0 2289 0 2289 #> 4579 TCGA-DB-5275-01 0 1458 0 1458 0 1458 0 1458 #> 4580 TCGA-DB-5276-01 0 2218 0 2218 0 2218 0 2218 #> 4581 TCGA-DB-5277-01 1 1547 1 1547 1 1156 1 1156 #> 4582 TCGA-DB-5278-01 0 2772 0 2772 NA NA 1 507 #> 4583 TCGA-DB-5279-01 0 1354 0 1354 1 695 1 695 #> 4584 TCGA-DB-5280-01 0 1112 0 1112 0 1112 0 1112 #> 4585 TCGA-DB-5281-01 0 2381 0 2381 NA NA 0 2381 #> 4586 TCGA-DB-A4X9-01 0 1412 0 1412 1 501 1 501 #> 4587 TCGA-DB-A4XA-01 0 573 0 573 NA NA 0 573 #> 4588 TCGA-DB-A4XB-01 0 919 0 919 NA NA 0 919 #> 4589 TCGA-DB-A4XC-01 0 1421 0 1421 NA NA 0 1421 #> 4590 TCGA-DB-A4XD-01 0 1210 0 1210 0 1210 0 1210 #> 4591 TCGA-DB-A4XE-01 0 1139 0 1139 0 1139 0 1139 #> 4592 TCGA-DB-A4XF-01 0 1021 0 1021 NA NA 1 468 #> 4593 TCGA-DB-A4XG-01 0 2219 0 2219 NA NA 0 2219 #> 4594 TCGA-DB-A4XH-01 0 962 0 962 NA NA 0 962 #> 4595 TCGA-DB-A64L-01 0 736 0 736 1 724 1 724 #> 4596 TCGA-DB-A64O-01 1 775 1 775 NA NA 1 430 #> 4597 TCGA-DB-A64P-01 0 916 0 916 0 916 0 916 #> 4598 TCGA-DB-A64Q-01 0 182 0 182 NA NA 0 182 #> 4599 TCGA-DB-A64R-01 0 955 0 955 0 955 0 955 #> 4600 TCGA-DB-A64S-01 0 835 0 835 0 835 0 835 #> 4601 TCGA-DB-A64U-01 0 846 0 846 0 846 0 846 #> 4602 TCGA-DB-A64V-01 0 889 0 889 NA NA 0 889 #> 4603 TCGA-DB-A64W-01 1 438 0 438 NA NA 0 438 #> 4604 TCGA-DB-A64X-01 0 563 0 563 NA NA 0 563 #> 4605 TCGA-DB-A75K-01 0 368 0 368 0 368 0 368 #> 4606 TCGA-DB-A75L-01 0 342 0 342 0 342 0 342 #> 4607 TCGA-DB-A75M-01 0 544 0 544 0 544 0 544 #> 4608 TCGA-DB-A75O-01 0 935 0 935 NA NA 0 935 #> 4609 TCGA-DB-A75P-01 0 492 0 492 0 492 0 492 #> 4610 TCGA-DH-5140-01 1 607 1 607 NA NA 1 607 #> 4611 TCGA-DH-5141-01 0 968 0 968 NA NA 0 968 #> 4612 TCGA-DH-5142-01 0 1943 0 1943 NA NA 1 1627 #> 4613 TCGA-DH-5143-01 0 1401 0 1401 NA NA 0 1401 #> 4614 TCGA-DH-5144-01 0 748 0 748 0 748 0 748 #> 4615 TCGA-DH-A669-02 1 919 0 919 NA NA 1 260 #> 4616 TCGA-DH-A669-01 1 919 0 919 NA NA 1 260 #> 4617 TCGA-DH-A66B-01 0 1279 0 1279 NA NA 0 1279 #> 4618 TCGA-DH-A66D-01 0 846 0 846 NA NA 0 846 #> 4619 TCGA-DH-A66F-01 0 523 0 523 0 523 0 523 #> 4620 TCGA-DH-A7UR-01 0 1650 0 1650 0 1650 0 1650 #> 4621 TCGA-DH-A7US-01 0 706 0 706 NA NA 0 706 #> 4622 TCGA-DH-A7UT-01 1 531 1 531 NA NA 1 404 #> 4623 TCGA-DH-A7UU-01 0 417 0 417 NA NA 0 417 #> 4624 TCGA-DH-A7UV-01 0 566 0 566 NA NA 0 566 #> 4625 TCGA-DU-5847-01 0 548 0 548 NA NA 0 548 #> 4626 TCGA-DU-5849-01 0 443 0 443 NA NA 0 443 #> 4627 TCGA-DU-5852-01 1 205 1 205 NA NA 1 24 #> 4628 TCGA-DU-5853-01 0 407 0 407 NA NA 0 407 #> 4629 TCGA-DU-5854-01 0 257 0 257 NA NA 1 202 #> 4630 TCGA-DU-5855-01 0 207 0 207 NA NA 0 207 #> 4631 TCGA-DU-5870-02 0 5546 0 5546 NA NA 1 4347 #> 4632 TCGA-DU-5870-01 0 5546 0 5546 NA NA 1 4347 #> 4633 TCGA-DU-5871-01 0 576 0 576 NA NA 0 576 #> 4634 TCGA-DU-5872-02 0 532 0 532 NA NA 1 265 #> 4635 TCGA-DU-5872-01 0 532 0 532 NA NA 1 265 #> 4636 TCGA-DU-5874-01 0 461 0 461 NA NA 0 461 #> 4637 TCGA-DU-6392-01 0 6423 0 6423 NA NA 1 950 #> 4638 TCGA-DU-6393-01 1 1585 NA 1585 NA NA 0 1585 #> 4639 TCGA-DU-6394-01 1 682 1 682 NA NA 1 353 #> 4640 TCGA-DU-6395-01 1 1491 1 1491 NA NA 1 1197 #> 4641 TCGA-DU-6396-01 1 2286 1 2286 NA NA 1 106 #> 4642 TCGA-DU-6397-02 1 1401 1 1401 NA NA 1 837 #> 4643 TCGA-DU-6399-01 1 2000 1 2000 NA NA 1 1629 #> 4644 TCGA-DU-6400-01 1 37 1 37 NA NA 1 37 #> 4645 TCGA-DU-6401-01 1 2660 1 2660 NA NA 1 1886 #> 4646 TCGA-DU-6402-01 1 214 1 214 NA NA 1 103 #> 4647 TCGA-DU-6403-01 1 354 1 354 NA NA 1 354 #> 4648 TCGA-DU-6404-02 1 4068 1 4068 NA NA 1 1154 #> 4649 TCGA-DU-6404-01 1 4068 1 4068 NA NA 1 1154 #> 4650 TCGA-DU-6405-01 1 605 1 605 NA NA 1 486 #> 4651 TCGA-DU-6406-01 1 512 NA 512 NA NA 0 512 #> 4652 TCGA-DU-6407-02 1 2875 1 2875 NA NA 1 2397 #> 4653 TCGA-DU-6407-01 1 2875 1 2875 NA NA 1 2397 #> 4654 TCGA-DU-6408-01 1 3470 NA 3470 NA NA 1 2097 #> 4655 TCGA-DU-6410-01 0 242 0 242 NA NA 0 242 #> 4656 TCGA-DU-6542-01 0 73 0 73 NA NA 0 73 #> 4657 TCGA-DU-7006-01 1 349 1 349 NA NA 1 349 #> 4658 TCGA-DU-7007-01 1 1915 NA 1915 NA NA 0 1915 #> 4659 TCGA-DU-7008-01 0 4752 0 4752 NA NA 1 330 #> 4660 TCGA-DU-7009-01 1 4695 1 4695 NA NA 1 2960 #> 4661 TCGA-DU-7010-01 1 456 1 456 NA NA 1 193 #> 4662 TCGA-DU-7011-01 1 3200 1 3200 NA NA 1 3200 #> 4663 TCGA-DU-7012-01 1 199 1 199 NA NA 1 199 #> 4664 TCGA-DU-7013-01 1 269 1 269 NA NA 1 187 #> 4665 TCGA-DU-7014-01 1 3571 1 3571 NA NA 1 3437 #> 4666 TCGA-DU-7015-01 0 2761 0 2761 NA NA 1 591 #> 4667 TCGA-DU-7018-01 1 933 1 933 NA NA 1 338 #> 4668 TCGA-DU-7019-01 0 800 0 800 NA NA 0 800 #> 4669 TCGA-DU-7290-01 1 315 1 315 NA NA 1 315 #> 4670 TCGA-DU-7292-01 1 242 1 242 NA NA 1 91 #> 4671 TCGA-DU-7294-01 0 2869 0 2869 NA NA 0 2869 #> 4672 TCGA-DU-7298-01 1 576 1 576 NA NA 1 200 #> 4673 TCGA-DU-7299-01 1 1339 1 1339 NA NA 1 675 #> 4674 TCGA-DU-7300-01 1 1886 1 1886 NA NA 1 317 #> 4675 TCGA-DU-7301-01 1 788 1 788 NA NA 1 366 #> 4676 TCGA-DU-7302-01 0 1834 0 1834 NA NA 1 1374 #> 4677 TCGA-DU-7304-02 1 709 1 709 NA NA 1 309 #> 4678 TCGA-DU-7306-01 0 1277 0 1277 NA NA 1 1250 #> 4679 TCGA-DU-7309-01 0 84 0 84 NA NA 0 84 #> 4680 TCGA-DU-8158-01 1 155 1 155 NA NA 1 155 #> 4681 TCGA-DU-8161-01 1 722 1 722 NA NA 1 111 #> 4682 TCGA-DU-8162-01 1 444 1 444 NA NA 1 402 #> 4683 TCGA-DU-8163-01 0 629 0 629 NA NA 1 509 #> 4684 TCGA-DU-8164-01 0 651 0 651 NA NA 0 651 #> 4685 TCGA-DU-8165-01 0 582 0 582 NA NA 0 582 #> 4686 TCGA-DU-8166-01 0 516 0 516 NA NA 1 193 #> 4687 TCGA-DU-8167-01 0 471 0 471 NA NA 0 471 #> 4688 TCGA-DU-8168-01 0 431 0 431 NA NA 0 431 #> 4689 TCGA-DU-A5TP-01 0 1012 0 1012 NA NA 1 203 #> 4690 TCGA-DU-A5TR-01 0 908 0 908 NA NA 1 848 #> 4691 TCGA-DU-A5TS-01 0 964 0 964 NA NA 1 551 #> 4692 TCGA-DU-A5TT-01 0 743 0 743 NA NA 1 584 #> 4693 TCGA-DU-A5TU-01 0 796 0 796 NA NA 1 186 #> 4694 TCGA-DU-A5TW-01 0 760 0 760 NA NA 0 760 #> 4695 TCGA-DU-A5TY-01 1 1033 1 1033 NA NA 1 526 #> 4696 TCGA-DU-A6S2-01 0 777 0 777 NA NA 0 777 #> 4697 TCGA-DU-A6S3-01 0 656 0 656 NA NA 0 656 #> 4698 TCGA-DU-A6S6-01 0 2893 0 2893 NA NA 1 2267 #> 4699 TCGA-DU-A6S7-01 0 638 0 638 NA NA 0 638 #> 4700 TCGA-DU-A6S8-01 0 678 0 678 NA NA 1 641 #> 4701 TCGA-DU-A76K-01 1 347 1 347 NA NA 1 203 #> 4702 TCGA-DU-A76L-01 1 814 1 814 NA NA 1 410 #> 4703 TCGA-DU-A76O-01 0 522 0 522 NA NA 0 522 #> 4704 TCGA-DU-A76R-01 1 648 1 648 NA NA 1 338 #> 4705 TCGA-DU-A7T6-01 1 547 1 547 NA NA 1 547 #> 4706 TCGA-DU-A7T8-01 1 4229 1 4229 NA NA 1 3009 #> 4707 TCGA-DU-A7TA-01 0 2565 0 2565 NA NA 0 2565 #> 4708 TCGA-DU-A7TB-01 0 1567 0 1567 NA NA 1 74 #> 4709 TCGA-DU-A7TC-01 0 1137 0 1137 NA NA 1 1114 #> 4710 TCGA-DU-A7TD-01 1 228 1 228 NA NA 1 188 #> 4711 TCGA-DU-A7TG-01 1 1351 NA 1351 NA NA 0 1351 #> 4712 TCGA-DU-A7TI-01 1 1183 1 1183 NA NA 1 822 #> 4713 TCGA-DU-A7TJ-01 0 17 0 17 NA NA 0 17 #> 4714 TCGA-E1-5302-01 1 1525 1 1525 NA NA 1 1242 #> 4715 TCGA-E1-5303-01 1 2052 1 2052 NA NA 1 156 #> 4716 TCGA-E1-5304-01 1 1251 1 1251 NA NA 1 903 #> 4717 TCGA-E1-5305-01 1 2433 1 2433 NA NA 1 1604 #> 4718 TCGA-E1-5307-01 1 1762 1 1762 NA NA 1 1452 #> 4719 TCGA-E1-5311-01 1 4084 1 4084 NA NA 1 2602 #> 4720 TCGA-E1-5318-01 1 2379 1 2379 NA NA 1 362 #> 4721 TCGA-E1-5319-01 1 2907 1 2907 NA NA 1 923 #> 4722 TCGA-E1-5322-01 1 3978 NA 3978 NA NA 1 1085 #> 4723 TCGA-E1-A7YD-01 1 435 1 435 NA NA 1 284 #> 4724 TCGA-E1-A7YE-01 1 886 1 886 NA NA 1 188 #> 4725 TCGA-E1-A7YH-01 1 2835 1 2835 NA NA 1 689 #> 4726 TCGA-E1-A7YI-01 1 111 1 111 NA NA 1 56 #> 4727 TCGA-E1-A7YJ-01 1 592 1 592 NA NA 1 516 #> 4728 TCGA-E1-A7YK-01 1 378 NA 378 NA NA 0 378 #> 4729 TCGA-E1-A7YL-01 1 492 1 492 NA NA 1 91 #> 4730 TCGA-E1-A7YM-01 1 648 1 648 NA NA 1 88 #> 4731 TCGA-E1-A7YN-01 1 727 1 727 NA NA 1 420 #> 4732 TCGA-E1-A7YO-01 1 2282 1 2282 NA NA 1 1977 #> 4733 TCGA-E1-A7YQ-01 1 1578 1 1578 NA NA 1 580 #> 4734 TCGA-E1-A7YS-01 1 466 1 466 NA NA 1 466 #> 4735 TCGA-E1-A7YU-01 1 23 1 23 NA NA 1 23 #> 4736 TCGA-E1-A7YV-01 1 987 1 987 NA NA 1 97 #> 4737 TCGA-E1-A7YW-01 1 1120 1 1120 NA NA 1 409 #> 4738 TCGA-E1-A7YY-01 1 4445 1 4445 NA NA 1 958 #> 4739 TCGA-E1-A7Z2-01 1 398 1 398 NA NA 1 213 #> 4740 TCGA-E1-A7Z3-01 1 2235 1 2235 NA NA 1 1569 #> 4741 TCGA-E1-A7Z4-01 1 4412 1 4412 NA NA 1 846 #> 4742 TCGA-E1-A7Z6-01 1 984 1 984 NA NA 1 294 #> 4743 TCGA-EZ-7264-01 0 1201 0 1201 NA NA 0 1201 #> 4744 TCGA-F6-A8O3-01 0 7 0 7 0 7 0 7 #> 4745 TCGA-F6-A8O4-01 0 6 0 6 0 6 0 6 #> 4746 TCGA-FG-5962-01 0 1453 0 1453 NA NA 0 1453 #> 4747 TCGA-FG-5963-02 1 775 1 775 NA NA 1 395 #> 4748 TCGA-FG-5963-01 1 775 1 775 NA NA 1 395 #> 4749 TCGA-FG-5964-01 0 1588 0 1588 NA NA 0 1588 #> 4750 TCGA-FG-5965-02 1 1120 1 1120 NA NA 1 715 #> 4751 TCGA-FG-5965-01 1 1120 1 1120 NA NA 1 715 #> 4752 TCGA-FG-6688-01 0 571 0 571 NA NA 1 405 #> 4753 TCGA-FG-6689-01 0 454 0 454 NA NA 1 119 #> 4754 TCGA-FG-6690-01 0 1294 0 1294 NA NA 0 1294 #> 4755 TCGA-FG-6691-01 0 1257 0 1257 1 913 1 913 #> 4756 TCGA-FG-6692-01 1 561 1 561 NA NA 1 561 #> 4757 TCGA-FG-7634-01 0 467 0 467 NA NA 0 467 #> 4758 TCGA-FG-7636-01 0 544 0 544 0 544 0 544 #> 4759 TCGA-FG-7637-01 0 1219 0 1219 NA NA 0 1219 #> 4760 TCGA-FG-7638-01 0 686 0 686 NA NA 1 407 #> 4761 TCGA-FG-7641-01 0 627 0 627 0 627 0 627 #> 4762 TCGA-FG-7643-01 0 611 0 611 NA NA 1 254 #> 4763 TCGA-FG-8181-01 0 862 0 862 NA NA 0 862 #> 4764 TCGA-FG-8182-01 0 416 0 416 NA NA 0 416 #> 4765 TCGA-FG-8185-01 0 433 0 433 0 433 0 433 #> 4766 TCGA-FG-8186-01 0 487 0 487 NA NA 0 487 #> 4767 TCGA-FG-8187-01 0 611 0 611 0 611 0 611 #> 4768 TCGA-FG-8188-01 0 455 0 455 NA NA 1 384 #> 4769 TCGA-FG-8189-01 0 685 0 685 NA NA 0 685 #> 4770 TCGA-FG-8191-01 0 992 0 992 NA NA 0 992 #> 4771 TCGA-FG-A4MT-02 0 1164 0 1164 1 499 1 499 #> 4772 TCGA-FG-A4MT-01 0 1164 0 1164 1 499 1 499 #> 4773 TCGA-FG-A4MU-01 0 326 0 326 NA NA 0 326 #> 4774 TCGA-FG-A4MW-01 1 559 1 559 NA NA 1 226 #> 4775 TCGA-FG-A4MX-01 0 569 0 569 0 569 0 569 #> 4776 TCGA-FG-A4MY-01 0 721 0 721 NA NA 0 721 #> 4777 TCGA-FG-A60J-01 0 449 0 449 0 449 0 449 #> 4778 TCGA-FG-A60K-01 0 542 0 542 NA NA 0 542 #> 4779 TCGA-FG-A60L-01 0 655 0 655 0 655 0 655 #> 4780 TCGA-FG-A6IZ-01 0 457 0 457 0 457 0 457 #> 4781 TCGA-FG-A6J1-01 0 500 0 500 NA NA 0 500 #> 4782 TCGA-FG-A6J3-01 0 677 0 677 NA NA 1 285 #> 4783 TCGA-FG-A70Y-01 0 868 0 868 1 490 1 490 #> 4784 TCGA-FG-A70Z-01 0 328 0 328 NA NA 0 328 #> 4785 TCGA-FG-A710-01 0 1115 0 1115 NA NA 0 1115 #> 4786 TCGA-FG-A711-01 1 1481 1 1481 NA NA 1 347 #> 4787 TCGA-FG-A713-01 0 622 0 622 0 622 0 622 #> 4788 TCGA-FG-A87N-01 0 567 0 567 NA NA 0 567 #> 4789 TCGA-FG-A87Q-01 0 174 0 174 0 174 0 174 #> 4790 TCGA-FN-7833-01 0 837 0 837 0 837 0 837 #> 4791 TCGA-HT-7467-01 0 3 0 3 0 3 0 3 #> 4792 TCGA-HT-7468-01 0 203 0 203 NA NA 0 203 #> 4793 TCGA-HT-7469-01 1 351 1 351 NA NA 1 92 #> 4794 TCGA-HT-7470-01 1 1220 0 1220 0 1220 0 1220 #> 4795 TCGA-HT-7471-01 0 4 0 4 NA NA 0 4 #> 4796 TCGA-HT-7472-01 0 1 0 1 NA NA 0 1 #> 4797 TCGA-HT-7473-01 0 503 0 503 0 503 0 503 #> 4798 TCGA-HT-7474-01 0 114 0 114 NA NA 0 114 #> 4799 TCGA-HT-7475-01 0 530 0 530 0 530 0 530 #> 4800 TCGA-HT-7476-01 0 199 0 199 NA NA 0 199 #> 4801 TCGA-HT-7477-01 0 738 0 738 0 738 0 738 #> 4802 TCGA-HT-7478-01 0 194 0 194 0 194 0 194 #> 4803 TCGA-HT-7479-01 0 1227 0 1227 1 705 1 705 #> 4804 TCGA-HT-7480-01 0 2287 0 2287 NA NA 1 1943 #> 4805 TCGA-HT-7481-01 0 2918 0 2918 NA NA 1 880 #> 4806 TCGA-HT-7482-01 0 3253 0 3253 NA NA 1 374 #> 4807 TCGA-HT-7483-01 0 5255 0 5255 0 5255 0 5255 #> 4808 TCGA-HT-7485-01 0 122 0 122 0 122 0 122 #> 4809 TCGA-HT-7601-01 0 153 0 153 NA NA 0 153 #> 4810 TCGA-HT-7602-01 0 908 0 908 NA NA 0 908 #> 4811 TCGA-HT-7603-01 0 705 0 705 0 705 0 705 #> 4812 TCGA-HT-7604-01 0 3725 0 3725 NA NA 0 3725 #> 4813 TCGA-HT-7605-01 0 139 0 139 NA NA 0 139 #> 4814 TCGA-HT-7606-01 0 526 0 526 0 526 0 526 #> 4815 TCGA-HT-7607-01 1 96 1 96 NA NA 1 96 #> 4816 TCGA-HT-7608-01 0 671 0 671 NA NA 0 671 #> 4817 TCGA-HT-7609-01 0 1399 0 1399 NA NA 0 1399 #> 4818 TCGA-HT-7610-01 0 1706 0 1706 NA NA 1 1205 #> 4819 TCGA-HT-7611-01 0 1752 0 1752 0 1752 0 1752 #> 4820 TCGA-HT-7616-01 1 7 1 7 NA NA 1 7 #> 4821 TCGA-HT-7620-01 0 434 0 434 1 280 1 280 #> 4822 TCGA-HT-7676-01 0 5 0 5 NA NA 0 5 #> 4823 TCGA-HT-7677-01 0 494 0 494 NA NA 0 494 #> 4824 TCGA-HT-7680-01 0 23 0 23 NA NA 0 23 #> 4825 TCGA-HT-7681-01 0 1359 0 1359 0 1359 0 1359 #> 4826 TCGA-HT-7684-01 0 184 0 184 0 184 0 184 #> 4827 TCGA-HT-7686-01 0 1300 0 1300 0 1300 0 1300 #> 4828 TCGA-HT-7687-01 0 3 0 3 NA NA 0 3 #> 4829 TCGA-HT-7688-01 0 964 0 964 0 964 0 964 #> 4830 TCGA-HT-7689-01 0 455 0 455 0 455 0 455 #> 4831 TCGA-HT-7690-01 0 3 0 3 NA NA 0 3 #> 4832 TCGA-HT-7691-01 0 3 0 3 NA NA 0 3 #> 4833 TCGA-HT-7692-01 0 90 0 90 0 90 0 90 #> 4834 TCGA-HT-7693-01 0 533 0 533 NA NA 0 533 #> 4835 TCGA-HT-7694-01 0 210 0 210 0 210 0 210 #> 4836 TCGA-HT-7695-01 0 442 0 442 0 442 0 442 #> 4837 TCGA-HT-7854-01 0 1201 0 1201 NA NA 1 1147 #> 4838 TCGA-HT-7855-01 0 585 0 585 0 585 0 585 #> 4839 TCGA-HT-7856-01 0 1189 0 1189 0 1189 0 1189 #> 4840 TCGA-HT-7857-01 0 7 0 7 NA NA 0 7 #> 4841 TCGA-HT-7858-01 0 1540 0 1540 0 1540 0 1540 #> 4842 TCGA-HT-7860-01 0 15 0 15 NA NA 0 15 #> 4843 TCGA-HT-7873-01 0 718 0 718 NA NA 0 718 #> 4844 TCGA-HT-7874-01 0 1130 0 1130 0 1130 0 1130 #> 4845 TCGA-HT-7875-01 0 10 0 10 NA NA 0 10 #> 4846 TCGA-HT-7877-01 0 4 0 4 NA NA 0 4 #> 4847 TCGA-HT-7879-01 0 112 0 112 0 112 0 112 #> 4848 TCGA-HT-7880-01 0 162 0 162 NA NA 0 162 #> 4849 TCGA-HT-7881-01 0 1079 0 1079 0 1079 0 1079 #> 4850 TCGA-HT-7882-01 1 113 1 113 NA NA 1 113 #> 4851 TCGA-HT-7884-01 0 343 0 343 NA NA 0 343 #> 4852 TCGA-HT-7902-01 0 956 0 956 NA NA 0 956 #> 4853 TCGA-HT-8010-01 0 50 0 50 NA NA 0 50 #> 4854 TCGA-HT-8011-01 0 494 0 494 NA NA 1 278 #> 4855 TCGA-HT-8012-01 0 286 0 286 NA NA 1 133 #> 4856 TCGA-HT-8015-01 0 3 0 3 0 3 0 3 #> 4857 TCGA-HT-8018-01 1 1152 0 1152 NA NA 0 1152 #> 4858 TCGA-HT-8019-01 0 1004 0 1004 0 1004 0 1004 #> 4859 TCGA-HT-8104-01 0 372 0 372 NA NA 0 372 #> 4860 TCGA-HT-8105-01 0 190 0 190 NA NA 0 190 #> 4861 TCGA-HT-8106-01 0 3 0 3 NA NA 0 3 #> 4862 TCGA-HT-8107-01 0 14 0 14 NA NA 0 14 #> 4863 TCGA-HT-8108-01 0 76 0 76 NA NA 0 76 #> 4864 TCGA-HT-8109-01 0 169 0 169 NA NA 0 169 #> 4865 TCGA-HT-8110-01 0 419 0 419 0 419 0 419 #> 4866 TCGA-HT-8111-01 0 7 0 7 NA NA 0 7 #> 4867 TCGA-HT-8113-01 0 900 0 900 0 900 0 900 #> 4868 TCGA-HT-8114-01 0 1040 0 1040 0 1040 0 1040 #> 4869 TCGA-HT-8558-01 0 418 0 418 0 418 0 418 #> 4870 TCGA-HT-8563-01 0 860 0 860 0 860 0 860 #> 4871 TCGA-HT-8564-01 0 478 0 478 NA NA 1 120 #> 4872 TCGA-HT-A4DS-01 0 7 0 7 NA NA 0 7 #> 4873 TCGA-HT-A4DV-01 0 792 0 792 0 792 0 792 #> 4874 TCGA-HT-A5R5-01 0 4 0 4 0 4 0 4 #> 4875 TCGA-HT-A5R7-01 0 615 0 615 0 615 0 615 #> 4876 TCGA-HT-A5R9-01 0 2 0 2 NA NA 0 2 #> 4877 TCGA-HT-A5RA-01 0 832 0 832 NA NA 0 832 #> 4878 TCGA-HT-A5RB-01 0 3 0 3 NA NA 0 3 #> 4879 TCGA-HT-A5RC-01 1 162 1 162 NA NA 1 162 #> 4880 TCGA-HT-A614-01 0 82 0 82 NA NA 0 82 #> 4881 TCGA-HT-A615-01 0 515 0 515 0 515 0 515 #> 4882 TCGA-HT-A616-01 0 55 0 55 NA NA 0 55 #> 4883 TCGA-HT-A617-01 0 491 0 491 NA NA 1 395 #> 4884 TCGA-HT-A618-01 0 512 0 512 0 512 0 512 #> 4885 TCGA-HT-A619-01 0 651 0 651 0 651 0 651 #> 4886 TCGA-HT-A61A-01 0 194 0 194 0 194 0 194 #> 4887 TCGA-HT-A61B-01 0 533 0 533 0 533 0 533 #> 4888 TCGA-HT-A61C-01 1 537 1 537 1 476 1 476 #> 4889 TCGA-HT-A74H-01 0 74 0 74 NA NA 0 74 #> 4890 TCGA-HT-A74J-01 0 320 0 320 NA NA 0 320 #> 4891 TCGA-HT-A74K-01 0 467 0 467 0 467 0 467 #> 4892 TCGA-HT-A74L-01 0 336 0 336 NA NA 0 336 #> 4893 TCGA-HT-A74O-01 0 3 0 3 NA NA 0 3 #> 4894 TCGA-HW-7486-01 0 1721 0 1721 NA NA 0 1721 #> 4895 TCGA-HW-7487-01 0 1382 0 1382 NA NA 1 840 #> 4896 TCGA-HW-7489-01 1 1262 1 1262 NA NA 1 1262 #> 4897 TCGA-HW-7490-01 0 1387 0 1387 NA NA 0 1387 #> 4898 TCGA-HW-7491-01 0 2078 0 2078 NA NA 1 2197 #> 4899 TCGA-HW-7493-01 0 2107 0 2107 NA NA 0 2107 #> 4900 TCGA-HW-7495-01 0 1078 0 1078 NA NA 0 1078 #> 4901 TCGA-HW-8319-01 1 1209 1 1209 NA NA 1 997 #> 4902 TCGA-HW-8320-01 0 1217 0 1217 NA NA 0 1217 #> 4903 TCGA-HW-8321-01 0 1294 0 1294 NA NA 0 1294 #> 4904 TCGA-HW-8322-01 0 758 0 758 NA NA 0 758 #> 4905 TCGA-HW-A5KJ-01 1 962 1 962 NA NA 1 615 #> 4906 TCGA-HW-A5KK-01 1 388 1 388 NA NA 1 388 #> 4907 TCGA-HW-A5KL-01 0 878 0 878 NA NA 0 878 #> 4908 TCGA-HW-A5KM-01 0 630 0 630 NA NA 0 630 #> 4909 TCGA-IK-7675-01 1 578 1 578 NA NA 1 123 #> 4910 TCGA-IK-8125-01 0 1301 0 1301 0 1301 0 1301 #> 4911 TCGA-KT-A74X-01 0 438 0 438 NA NA 0 438 #> 4912 TCGA-KT-A7W1-01 0 438 0 438 NA NA 1 84 #> 4913 TCGA-P5-A5ET-01 0 0 0 0 NA NA 0 0 #> 4914 TCGA-P5-A5EU-01 0 0 0 0 NA NA 0 0 #> 4915 TCGA-P5-A5EV-01 0 7 0 7 NA NA 0 7 #> 4916 TCGA-P5-A5EW-01 0 204 0 204 NA NA 0 204 #> 4917 TCGA-P5-A5EX-01 0 243 0 243 NA NA 0 243 #> 4918 TCGA-P5-A5EY-01 0 72 0 72 NA NA 0 72 #> 4919 TCGA-P5-A5EZ-01 0 70 0 70 NA NA 0 70 #> 4920 TCGA-P5-A5F0-01 0 287 0 287 NA NA 0 287 #> 4921 TCGA-P5-A5F1-01 0 179 0 179 NA NA 0 179 #> 4922 TCGA-P5-A5F2-01 0 242 0 242 NA NA 0 242 #> 4923 TCGA-P5-A5F4-01 0 231 0 231 NA NA 0 231 #> 4924 TCGA-P5-A5F6-01 0 39 0 39 NA NA 0 39 #> 4925 TCGA-P5-A72U-01 0 7 0 7 0 7 0 7 #> 4926 TCGA-P5-A72W-01 0 317 0 317 0 317 0 317 #> 4927 TCGA-P5-A72X-01 0 403 0 403 0 403 0 403 #> 4928 TCGA-P5-A72Z-01 0 354 0 354 0 354 0 354 #> 4929 TCGA-P5-A730-01 0 333 0 333 0 333 0 333 #> 4930 TCGA-P5-A731-01 0 274 0 274 NA NA 0 274 #> 4931 TCGA-P5-A733-01 0 414 0 414 0 414 0 414 #> 4932 TCGA-P5-A735-01 0 292 0 292 0 292 0 292 #> 4933 TCGA-P5-A736-01 0 230 0 230 0 230 0 230 #> 4934 TCGA-P5-A737-01 0 372 0 372 0 372 0 372 #> 4935 TCGA-P5-A77W-01 0 584 0 584 0 584 0 584 #> 4936 TCGA-P5-A77X-01 0 105 0 105 0 105 0 105 #> 4937 TCGA-P5-A780-01 0 72 0 72 0 72 0 72 #> 4938 TCGA-P5-A781-01 0 134 0 134 0 134 0 134 #> 4939 TCGA-QH-A65R-01 0 461 0 461 NA NA 0 461 #> 4940 TCGA-QH-A65S-01 0 77 0 77 NA NA 0 77 #> 4941 TCGA-QH-A65V-01 0 384 0 384 NA NA 0 384 #> 4942 TCGA-QH-A65X-01 0 482 0 482 NA NA 0 482 #> 4943 TCGA-QH-A65Z-01 0 427 0 427 NA NA 0 427 #> 4944 TCGA-QH-A6CS-01 0 588 0 588 NA NA 1 498 #> 4945 TCGA-QH-A6CU-01 0 451 0 451 NA NA 0 451 #> 4946 TCGA-QH-A6CV-01 0 442 0 442 NA NA 0 442 #> 4947 TCGA-QH-A6CW-01 0 414 0 414 NA NA 0 414 #> 4948 TCGA-QH-A6CX-01 1 372 1 372 1 273 1 273 #> 4949 TCGA-QH-A6CY-01 0 408 0 408 NA NA 0 408 #> 4950 TCGA-QH-A6CZ-01 0 279 0 279 NA NA 0 279 #> 4951 TCGA-QH-A6X3-01 0 313 0 313 0 313 0 313 #> 4952 TCGA-QH-A6X4-01 0 442 0 442 0 442 0 442 #> 4953 TCGA-QH-A6X5-01 0 497 0 497 NA NA 0 497 #> 4954 TCGA-QH-A6X8-01 0 509 0 509 NA NA 0 509 #> 4955 TCGA-QH-A6X9-01 0 58 0 58 NA NA 0 58 #> 4956 TCGA-QH-A6XA-01 0 502 0 502 0 502 0 502 #> 4957 TCGA-QH-A6XC-01 0 508 0 508 1 438 1 438 #> 4958 TCGA-QH-A86X-01 0 337 0 337 0 337 0 337 #> 4959 TCGA-QH-A870-01 0 395 0 395 1 335 1 335 #> 4960 TCGA-R8-A6MK-01 0 2702 0 2702 NA NA 0 2702 #> 4961 TCGA-R8-A6ML-01 0 2860 0 2860 NA NA 0 2860 #> 4962 TCGA-R8-A6MO-01 0 993 0 993 NA NA 0 993 #> 4963 TCGA-R8-A73M-01 0 1806 0 1806 NA NA 0 1806 #> 4964 TCGA-RY-A83X-01 0 939 0 939 NA NA 0 939 #> 4965 TCGA-RY-A83Y-01 0 166 0 166 NA NA 0 166 #> 4966 TCGA-RY-A83Z-01 0 301 0 301 NA NA 0 301 #> 4967 TCGA-RY-A840-01 0 854 0 854 NA NA 0 854 #> 4968 TCGA-RY-A843-01 0 63 0 63 NA NA 0 63 #> 4969 TCGA-RY-A845-01 0 596 0 596 NA NA 0 596 #> 4970 TCGA-RY-A847-01 0 933 0 933 NA NA 0 933 #> 4971 TCGA-S9-A6TS-01 1 1891 1 1891 NA NA 1 1324 #> 4972 TCGA-S9-A6TU-01 0 2650 0 2650 NA NA 1 1475 #> 4973 TCGA-S9-A6TV-01 0 571 0 571 0 571 0 571 #> 4974 TCGA-S9-A6TW-01 0 1250 0 1250 NA NA 1 861 #> 4975 TCGA-S9-A6TX-01 0 1245 0 1245 1 856 1 856 #> 4976 TCGA-S9-A6TY-01 0 1076 0 1076 NA NA 0 1076 #> 4977 TCGA-S9-A6TZ-01 0 1120 0 1120 NA NA 1 552 #> 4978 TCGA-S9-A6U0-01 1 742 1 742 NA NA 1 692 #> 4979 TCGA-S9-A6U1-01 0 785 0 785 0 785 0 785 #> 4980 TCGA-S9-A6U2-01 0 908 0 908 NA NA 0 908 #> 4981 TCGA-S9-A6U5-01 0 992 0 992 0 992 0 992 #> 4982 TCGA-S9-A6U6-01 0 1069 0 1069 0 1069 0 1069 #> 4983 TCGA-S9-A6U8-01 1 2988 1 2988 NA NA 1 367 #> 4984 TCGA-S9-A6U9-01 0 2918 0 2918 NA NA 0 2918 #> 4985 TCGA-S9-A6UA-01 1 178 1 178 NA NA 1 161 #> 4986 TCGA-S9-A6UB-01 0 3761 0 3761 0 3761 0 3761 #> 4987 TCGA-S9-A6WD-01 0 2289 0 2289 NA NA 0 2289 #> 4988 TCGA-S9-A6WE-01 0 4113 0 4113 NA NA 0 4113 #> 4989 TCGA-S9-A6WG-01 0 2602 0 2602 NA NA 0 2602 #> 4990 TCGA-S9-A6WH-01 0 1173 0 1173 NA NA 0 1173 #> 4991 TCGA-S9-A6WI-01 0 2585 0 2585 NA NA 0 2585 #> 4992 TCGA-S9-A6WL-01 0 946 0 946 NA NA 1 240 #> 4993 TCGA-S9-A6WM-01 0 604 0 604 NA NA 1 505 #> 4994 TCGA-S9-A6WN-01 0 805 0 805 NA NA 1 303 #> 4995 TCGA-S9-A6WO-01 0 566 0 566 NA NA 1 187 #> 4996 TCGA-S9-A6WP-01 0 567 0 567 NA NA 0 567 #> 4997 TCGA-S9-A7IQ-01 0 1099 0 1099 NA NA 0 1099 #> 4998 TCGA-S9-A7IS-01 1 241 1 241 NA NA 1 241 #> 4999 TCGA-S9-A7IX-01 1 819 1 819 NA NA 1 350 #> 5000 TCGA-S9-A7IY-01 0 715 0 715 NA NA 0 715 #> 5001 TCGA-S9-A7IZ-01 0 608 0 608 NA NA 1 467 #> 5002 TCGA-S9-A7J0-01 0 609 0 609 NA NA 1 390 #> 5003 TCGA-S9-A7J1-01 0 249 0 249 NA NA 0 249 #> 5004 TCGA-S9-A7J2-01 0 62 0 62 NA NA 0 62 #> 5005 TCGA-S9-A7J3-01 0 629 0 629 NA NA 0 629 #> 5006 TCGA-S9-A7QW-01 0 458 0 458 1 382 1 382 #> 5007 TCGA-S9-A7QX-01 0 564 0 564 NA NA 0 564 #> 5008 TCGA-S9-A7QY-01 0 863 0 863 NA NA 0 863 #> 5009 TCGA-S9-A7QZ-01 0 826 0 826 NA NA 1 774 #> 5010 TCGA-S9-A7R1-01 1 5166 1 5166 NA NA 1 3637 #> 5011 TCGA-S9-A7R2-01 1 316 1 316 NA NA 1 316 #> 5012 TCGA-S9-A7R3-01 0 3013 0 3013 NA NA 1 970 #> 5013 TCGA-S9-A7R4-01 0 914 0 914 NA NA 0 914 #> 5014 TCGA-S9-A7R7-01 0 3000 0 3000 NA NA 1 144 #> 5015 TCGA-S9-A7R8-01 1 961 1 961 NA NA 1 698 #> 5016 TCGA-S9-A89V-01 0 569 0 569 NA NA 1 129 #> 5017 TCGA-S9-A89Z-01 0 623 0 623 NA NA 0 623 #> 5018 TCGA-TM-A7C3-01 1 1666 1 1666 1 713 1 713 #> 5019 TCGA-TM-A7C4-01 0 1470 0 1470 0 1470 0 1470 #> 5020 TCGA-TM-A7C5-01 0 1500 0 1500 0 1500 0 1500 #> 5021 TCGA-TM-A7CA-01 0 1058 0 1058 0 1058 0 1058 #> 5022 TCGA-TM-A7CF-02 0 1989 0 1989 1 924 1 924 #> 5023 TCGA-TM-A7CF-01 0 1989 0 1989 1 924 1 924 #> 5024 TCGA-TM-A84B-01 1 758 1 758 NA NA 1 758 #> 5025 TCGA-TM-A84C-01 1 492 1 492 NA NA 1 492 #> 5026 TCGA-TM-A84F-01 0 1796 0 1796 0 1796 0 1796 #> 5027 TCGA-TM-A84G-01 0 1236 0 1236 0 1236 0 1236 #> 5028 TCGA-TM-A84H-01 0 926 0 926 0 926 0 926 #> 5029 TCGA-TM-A84I-01 0 854 0 854 0 854 0 854 #> 5030 TCGA-TM-A84J-01 0 735 0 735 NA NA 1 454 #> 5031 TCGA-TM-A84L-01 1 1242 1 1242 1 987 1 987 #> 5032 TCGA-TM-A84M-01 0 754 0 754 0 754 0 754 #> 5033 TCGA-TM-A84O-01 1 1011 1 1011 NA NA 1 1011 #> 5034 TCGA-TM-A84Q-01 0 772 0 772 1 455 1 455 #> 5035 TCGA-TM-A84R-01 0 566 0 566 0 566 0 566 #> 5036 TCGA-TM-A84S-01 0 454 0 454 0 454 0 454 #> 5037 TCGA-TM-A84T-01 0 724 0 724 NA NA 0 724 #> 5038 TCGA-TQ-A7RF-01 0 650 0 650 NA NA 0 650 #> 5039 TCGA-TQ-A7RG-01 0 599 0 599 NA NA 0 599 #> 5040 TCGA-TQ-A7RH-01 0 486 0 486 NA NA 0 486 #> 5041 TCGA-TQ-A7RI-01 0 62 0 62 NA NA 0 62 #> 5042 TCGA-TQ-A7RJ-01 0 1229 0 1229 NA NA 0 1229 #> 5043 TCGA-TQ-A7RK-02 0 1341 0 1341 1 858 1 858 #> 5044 TCGA-TQ-A7RK-01 0 1341 0 1341 1 858 1 858 #> 5045 TCGA-TQ-A7RM-01 0 1116 0 1116 NA NA 0 1116 #> 5046 TCGA-TQ-A7RN-01 0 1026 0 1026 NA NA 0 1026 #> 5047 TCGA-TQ-A7RO-01 0 949 0 949 NA NA 0 949 #> 5048 TCGA-TQ-A7RP-01 0 914 0 914 NA NA 0 914 #> 5049 TCGA-TQ-A7RQ-01 0 795 0 795 0 795 0 795 #> 5050 TCGA-TQ-A7RR-01 0 787 0 787 NA NA 0 787 #> 5051 TCGA-TQ-A7RS-01 0 0 0 0 0 0 0 0 #> 5052 TCGA-TQ-A7RU-01 0 1032 0 1032 NA NA 0 1032 #> 5053 TCGA-TQ-A7RV-02 0 1868 0 1868 NA NA 1 530 #> 5054 TCGA-TQ-A7RV-01 0 1868 0 1868 NA NA 1 530 #> 5055 TCGA-TQ-A7RW-01 1 821 1 821 NA NA 1 511 #> 5056 TCGA-TQ-A8XE-02 1 954 1 954 NA NA 1 455 #> 5057 TCGA-TQ-A8XE-01 1 954 1 954 NA NA 1 455 #> 5058 TCGA-VM-A8C8-01 0 1397 0 1397 NA NA 1 456 #> 5059 TCGA-VM-A8C9-01 0 1314 0 1314 0 1314 0 1314 #> 5060 TCGA-VM-A8CA-01 0 411 0 411 NA NA 0 411 #> 5061 TCGA-VM-A8CB-01 0 3 0 3 NA NA 0 3 #> 5062 TCGA-VM-A8CD-01 1 240 1 240 NA NA 1 240 #> 5063 TCGA-VM-A8CE-01 0 1191 0 1191 NA NA 1 815 #> 5064 TCGA-VM-A8CF-01 0 609 0 609 NA NA 0 609 #> 5065 TCGA-VM-A8CH-01 0 714 0 714 0 714 0 714 #> 5066 TCGA-VV-A829-01 0 1127 0 1127 NA NA 0 1127 #> 5067 TCGA-VV-A86M-01 0 487 0 487 NA NA 0 487 #> 5068 TCGA-VW-A7QS-01 0 706 0 706 NA NA 0 706 #> 5069 TCGA-VW-A8FI-01 1 245 1 245 NA NA 1 245 #> 5070 TCGA-W9-A837-01 0 1553 0 1553 NA NA 0 1553 #> 5071 TCGA-WH-A86K-01 0 405 0 405 NA NA 0 405 #> 5072 TCGA-WY-A858-01 0 1337 0 1337 0 1337 0 1337 #> 5073 TCGA-WY-A859-01 0 1213 0 1213 NA NA 0 1213 #> 5074 TCGA-WY-A85A-01 0 1320 0 1320 NA NA 0 1320 #> 5075 TCGA-WY-A85B-01 0 1393 0 1393 0 1393 0 1393 #> 5076 TCGA-WY-A85C-01 0 1426 0 1426 NA NA 1 809 #> 5077 TCGA-WY-A85D-01 0 1147 0 1147 NA NA 1 887 #> 5078 TCGA-WY-A85E-01 0 633 0 633 NA NA 1 532 #> 5079 TCGA-2V-A95S-01 0 NA 0 NA 0 NA 0 NA #> 5080 TCGA-2Y-A9GS-01 1 724 1 724 1 102 1 102 #> 5081 TCGA-2Y-A9GT-01 1 1624 1 1624 1 1083 1 1083 #> 5082 TCGA-2Y-A9GU-01 0 1939 0 1939 0 1939 0 1939 #> 5083 TCGA-2Y-A9GV-01 1 2532 1 2532 0 2532 1 1745 #> 5084 TCGA-2Y-A9GW-01 1 1271 1 1271 1 1229 1 1229 #> 5085 TCGA-2Y-A9GX-01 0 2442 0 2442 NA NA 1 2133 #> 5086 TCGA-2Y-A9GY-01 1 757 1 757 1 637 1 637 #> 5087 TCGA-2Y-A9GZ-01 1 848 1 848 1 719 1 719 #> 5088 TCGA-2Y-A9H0-01 0 3675 0 3675 0 3675 0 3675 #> 5089 TCGA-2Y-A9H1-01 1 1229 1 1229 1 321 1 321 #> 5090 TCGA-2Y-A9H2-01 0 1731 0 1731 0 1731 0 1731 #> 5091 TCGA-2Y-A9H3-01 0 1516 0 1516 1 22 1 22 #> 5092 TCGA-2Y-A9H4-01 0 1452 0 1452 0 1452 0 1452 #> 5093 TCGA-2Y-A9H5-01 1 555 1 555 1 258 1 258 #> 5094 TCGA-2Y-A9H6-01 0 357 0 357 0 357 0 357 #> 5095 TCGA-2Y-A9H7-01 0 1168 0 1168 1 1117 1 1117 #> 5096 TCGA-2Y-A9H8-01 1 633 1 633 1 398 1 398 #> 5097 TCGA-2Y-A9H9-01 0 697 0 697 1 59 1 59 #> 5098 TCGA-2Y-A9HA-01 1 36 1 36 NA NA 1 36 #> 5099 TCGA-2Y-A9HB-01 0 260 0 260 0 260 0 260 #> 5100 TCGA-3K-AAZ8-01 0 396 0 396 NA NA 1 151 #> 5101 TCGA-4R-AA8I-01 1 262 1 262 1 158 1 158 #> 5102 TCGA-5C-A9VG-01 0 328 0 328 0 328 0 328 #> 5103 TCGA-5C-A9VH-01 0 322 0 322 0 322 0 322 #> 5104 TCGA-5C-AAPD-01 0 20 0 20 0 20 0 20 #> 5105 TCGA-5R-AA1C-01 0 520 0 520 0 520 0 520 #> 5106 TCGA-5R-AA1D-01 0 449 0 449 0 449 0 449 #> 5107 TCGA-5R-AAAM-01 1 46 0 46 0 46 0 46 #> 5108 TCGA-BC-4072-01 1 1490 1 1490 NA NA 1 475 #> 5109 TCGA-BC-4073-01 0 849 0 849 NA NA 0 849 #> 5110 TCGA-BC-A10Q-01 1 1135 1 1135 NA NA 1 340 #> 5111 TCGA-BC-A10Q-11 1 1135 1 1135 NA NA 1 340 #> 5112 TCGA-BC-A10R-01 1 308 1 308 1 199 1 199 #> 5113 TCGA-BC-A10R-11 1 308 1 308 1 199 1 199 #> 5114 TCGA-BC-A10S-01 1 1423 1 1423 1 1130 1 1130 #> 5115 TCGA-BC-A10T-01 1 837 1 837 NA NA 1 598 #> 5116 TCGA-BC-A10T-11 1 837 1 837 NA NA 1 598 #> 5117 TCGA-BC-A10U-01 1 837 1 837 NA NA 1 586 #> 5118 TCGA-BC-A10U-11 1 837 1 837 NA NA 1 586 #> 5119 TCGA-BC-A10W-01 1 91 1 91 NA NA 1 91 #> 5120 TCGA-BC-A10W-11 1 91 1 91 NA NA 1 91 #> 5121 TCGA-BC-A10X-01 1 770 0 770 0 770 0 770 #> 5122 TCGA-BC-A10X-11 1 770 0 770 0 770 0 770 #> 5123 TCGA-BC-A10Y-01 1 711 1 711 1 400 1 400 #> 5124 TCGA-BC-A10Y-11 1 711 1 711 1 400 1 400 #> 5125 TCGA-BC-A10Z-01 1 34 0 34 0 34 0 34 #> 5126 TCGA-BC-A10Z-11 1 34 0 34 0 34 0 34 #> 5127 TCGA-BC-A110-01 1 2116 1 2116 1 2057 1 2057 #> 5128 TCGA-BC-A110-11 1 2116 1 2116 1 2057 1 2057 #> 5129 TCGA-BC-A112-01 1 153 0 153 0 153 0 153 #> 5130 TCGA-BC-A216-01 0 1351 0 1351 0 1351 0 1351 #> 5131 TCGA-BC-A216-11 0 1351 0 1351 0 1351 0 1351 #> 5132 TCGA-BC-A217-01 1 1397 0 1397 0 1397 0 1397 #> 5133 TCGA-BC-A3KF-01 0 8 0 8 0 8 0 8 #> 5134 TCGA-BC-A3KG-01 0 680 0 680 1 209 1 209 #> 5135 TCGA-BC-A5W4-01 1 547 0 547 NA NA 1 384 #> 5136 TCGA-BC-A69H-01 0 444 0 444 0 444 0 444 #> 5137 TCGA-BC-A69I-01 0 387 0 387 0 387 0 387 #> 5138 TCGA-BC-A8YO-01 0 562 0 562 1 220 1 220 #> 5139 TCGA-BD-A2L6-01 0 1363 0 1363 1 415 1 415 #> 5140 TCGA-BD-A2L6-11 0 1363 0 1363 1 415 1 415 #> 5141 TCGA-BD-A3EP-01 0 409 0 409 0 409 0 409 #> 5142 TCGA-BD-A3EP-11 0 409 0 409 0 409 0 409 #> 5143 TCGA-BD-A3ER-01 0 1115 0 1115 1 226 1 226 #> 5144 TCGA-BW-A5NO-01 0 20 0 20 NA NA 0 20 #> 5145 TCGA-BW-A5NP-01 0 0 0 0 NA NA 1 102 #> 5146 TCGA-BW-A5NQ-01 0 0 0 0 NA NA 0 0 #> 5147 TCGA-CC-5258-01 1 129 0 129 NA NA 0 129 #> 5148 TCGA-CC-5259-01 0 250 0 250 1 180 1 180 #> 5149 TCGA-CC-5260-01 1 87 0 87 NA NA 0 87 #> 5150 TCGA-CC-5261-01 1 97 0 97 NA NA 0 97 #> 5151 TCGA-CC-5262-01 1 103 0 103 NA NA 0 103 #> 5152 TCGA-CC-5263-01 1 129 0 129 NA NA 0 129 #> 5153 TCGA-CC-5264-01 1 102 0 102 NA NA 0 102 #> 5154 TCGA-CC-A123-01 0 219 0 219 NA NA 1 145 #> 5155 TCGA-CC-A1HT-01 1 101 0 101 NA NA 0 101 #> 5156 TCGA-CC-A3M9-01 1 300 1 300 1 219 1 219 #> 5157 TCGA-CC-A3MA-01 1 303 1 303 1 261 1 261 #> 5158 TCGA-CC-A3MB-01 1 315 1 315 0 315 1 260 #> 5159 TCGA-CC-A3MC-01 0 363 0 363 1 297 1 297 #> 5160 TCGA-CC-A5UC-01 1 347 1 347 0 347 1 312 #> 5161 TCGA-CC-A5UD-01 1 304 1 304 1 182 1 182 #> 5162 TCGA-CC-A5UE-01 1 272 1 272 1 175 1 175 #> 5163 TCGA-CC-A7IE-01 1 217 1 217 0 217 1 169 #> 5164 TCGA-CC-A7IF-01 1 649 1 649 0 649 1 254 #> 5165 TCGA-CC-A7IG-01 1 299 1 299 1 195 1 195 #> 5166 TCGA-CC-A7IH-01 0 365 0 365 0 365 0 365 #> 5167 TCGA-CC-A7II-01 0 399 0 399 1 278 1 278 #> 5168 TCGA-CC-A7IJ-01 0 382 0 382 0 382 0 382 #> 5169 TCGA-CC-A7IK-01 1 262 1 262 1 150 1 150 #> 5170 TCGA-CC-A7IL-01 1 278 1 278 1 179 1 179 #> 5171 TCGA-CC-A8HS-01 1 300 1 300 1 201 1 201 #> 5172 TCGA-CC-A8HT-01 1 140 1 140 1 83 1 83 #> 5173 TCGA-CC-A8HU-01 1 344 1 344 1 301 1 301 #> 5174 TCGA-CC-A8HV-01 1 279 1 279 1 149 1 149 #> 5175 TCGA-CC-A9FS-01 0 211 0 211 0 211 1 109 #> 5176 TCGA-CC-A9FU-01 0 0 0 0 0 0 0 0 #> 5177 TCGA-CC-A9FV-01 0 0 0 0 0 0 0 0 #> 5178 TCGA-CC-A9FW-01 0 248 0 248 1 153 1 153 #> 5179 TCGA-DD-A113-01 0 2425 0 2425 1 1676 1 1676 #> 5180 TCGA-DD-A113-11 0 2425 0 2425 1 1676 1 1676 #> 5181 TCGA-DD-A114-01 1 1149 0 1149 0 1149 0 1149 #> 5182 TCGA-DD-A114-11 1 1149 0 1149 0 1149 0 1149 #> 5183 TCGA-DD-A115-01 1 2542 1 2542 1 469 1 469 #> 5184 TCGA-DD-A116-01 1 1622 0 1622 1 828 1 828 #> 5185 TCGA-DD-A116-11 1 1622 0 1622 1 828 1 828 #> 5186 TCGA-DD-A118-01 0 3437 0 3437 1 658 1 658 #> 5187 TCGA-DD-A118-11 0 3437 0 3437 1 658 1 658 #> 5188 TCGA-DD-A119-01 1 223 NA 223 NA NA 0 223 #> 5189 TCGA-DD-A119-11 1 223 NA 223 NA NA 0 223 #> 5190 TCGA-DD-A11A-01 0 79 0 79 0 79 0 79 #> 5191 TCGA-DD-A11A-11 0 79 0 79 0 79 0 79 #> 5192 TCGA-DD-A11B-01 1 14 0 14 NA NA 0 14 #> 5193 TCGA-DD-A11B-11 1 14 0 14 NA NA 0 14 #> 5194 TCGA-DD-A11C-01 0 662 0 662 NA NA 0 662 #> 5195 TCGA-DD-A11C-11 0 662 0 662 NA NA 0 662 #> 5196 TCGA-DD-A11D-01 1 1560 1 1560 1 498 1 498 #> 5197 TCGA-DD-A11D-11 1 1560 1 1560 1 498 1 498 #> 5198 TCGA-DD-A1EA-01 0 2415 0 2415 1 754 1 754 #> 5199 TCGA-DD-A1EB-01 0 2017 0 2017 1 505 1 505 #> 5200 TCGA-DD-A1EB-11 0 2017 0 2017 1 505 1 505 #> 5201 TCGA-DD-A1EC-01 0 602 0 602 1 299 1 299 #> 5202 TCGA-DD-A1EC-11 0 602 0 602 1 299 1 299 #> 5203 TCGA-DD-A1ED-01 0 2301 0 2301 0 2301 0 2301 #> 5204 TCGA-DD-A1EE-01 1 349 1 349 1 44 1 44 #> 5205 TCGA-DD-A1EE-11 1 349 1 349 1 44 1 44 #> 5206 TCGA-DD-A1EF-01 1 394 1 394 NA NA 1 394 #> 5207 TCGA-DD-A1EG-01 1 1372 1 1372 1 875 1 875 #> 5208 TCGA-DD-A1EG-11 1 1372 1 1372 1 875 1 875 #> 5209 TCGA-DD-A1EH-01 0 1495 0 1495 1 120 1 120 #> 5210 TCGA-DD-A1EH-11 0 1495 0 1495 1 120 1 120 #> 5211 TCGA-DD-A1EI-01 0 183 0 183 0 183 0 183 #> 5212 TCGA-DD-A1EI-11 0 183 0 183 0 183 0 183 #> 5213 TCGA-DD-A1EJ-01 1 1005 1 1005 1 263 1 263 #> 5214 TCGA-DD-A1EJ-11 1 1005 1 1005 1 263 1 263 #> 5215 TCGA-DD-A1EK-01 1 558 1 558 NA NA 1 167 #> 5216 TCGA-DD-A1EL-01 1 415 1 415 NA NA 1 415 #> 5217 TCGA-DD-A1EL-11 1 415 1 415 NA NA 1 415 #> 5218 TCGA-DD-A39V-01 1 643 1 643 1 455 1 455 #> 5219 TCGA-DD-A39V-11 1 643 1 643 1 455 1 455 #> 5220 TCGA-DD-A39W-01 1 827 NA 827 0 827 0 827 #> 5221 TCGA-DD-A39W-11 1 827 NA 827 0 827 0 827 #> 5222 TCGA-DD-A39X-01 1 1694 1 1694 1 1032 1 1032 #> 5223 TCGA-DD-A39X-11 1 1694 1 1694 1 1032 1 1032 #> 5224 TCGA-DD-A39Y-01 1 171 0 171 0 171 0 171 #> 5225 TCGA-DD-A39Z-01 1 601 0 601 0 601 0 601 #> 5226 TCGA-DD-A39Z-11 1 601 0 601 0 601 0 601 #> 5227 TCGA-DD-A3A1-01 1 233 0 233 0 233 0 233 #> 5228 TCGA-DD-A3A1-11 1 233 0 233 0 233 0 233 #> 5229 TCGA-DD-A3A2-01 1 2131 0 2131 0 2131 0 2131 #> 5230 TCGA-DD-A3A2-11 1 2131 0 2131 0 2131 0 2131 #> 5231 TCGA-DD-A3A3-01 1 535 NA 535 0 535 0 535 #> 5232 TCGA-DD-A3A3-11 1 535 NA 535 0 535 0 535 #> 5233 TCGA-DD-A3A4-01 1 612 1 612 1 87 1 87 #> 5234 TCGA-DD-A3A4-11 1 612 1 612 1 87 1 87 #> 5235 TCGA-DD-A3A5-01 1 3125 1 3125 1 84 1 84 #> 5236 TCGA-DD-A3A5-11 1 3125 1 3125 1 84 1 84 #> 5237 TCGA-DD-A3A6-01 1 3258 0 3258 0 3258 0 3258 #> 5238 TCGA-DD-A3A6-11 1 3258 0 3258 0 3258 0 3258 #> 5239 TCGA-DD-A3A7-01 1 419 1 419 1 144 1 144 #> 5240 TCGA-DD-A3A8-01 1 11 0 11 0 11 0 11 #> 5241 TCGA-DD-A3A8-11 1 11 0 11 0 11 0 11 #> 5242 TCGA-DD-A3A9-01 1 931 1 931 NA NA 1 289 #> 5243 TCGA-DD-A4NA-01 0 1008 0 1008 0 1008 0 1008 #> 5244 TCGA-DD-A4NB-01 0 989 0 989 1 912 1 912 #> 5245 TCGA-DD-A4ND-01 0 2746 0 2746 0 2746 1 15 #> 5246 TCGA-DD-A4NE-01 1 660 1 660 1 190 1 190 #> 5247 TCGA-DD-A4NF-01 0 942 0 942 1 656 1 656 #> 5248 TCGA-DD-A4NG-01 1 802 1 802 1 430 1 430 #> 5249 TCGA-DD-A4NH-01 0 917 0 917 1 161 1 161 #> 5250 TCGA-DD-A4NI-01 0 816 0 816 0 816 0 816 #> 5251 TCGA-DD-A4NJ-01 0 928 0 928 1 549 1 549 #> 5252 TCGA-DD-A4NK-01 1 1210 1 1210 1 89 1 89 #> 5253 TCGA-DD-A4NL-01 0 1711 0 1711 0 1711 0 1711 #> 5254 TCGA-DD-A4NN-01 1 899 1 899 1 166 1 166 #> 5255 TCGA-DD-A4NO-01 0 2245 0 2245 1 990 1 990 #> 5256 TCGA-DD-A4NP-01 0 3308 0 3308 1 1286 1 1286 #> 5257 TCGA-DD-A4NQ-01 1 373 1 373 1 126 1 126 #> 5258 TCGA-DD-A4NS-01 1 2456 1 2456 1 893 1 893 #> 5259 TCGA-DD-A4NV-01 0 2398 0 2398 0 2398 0 2398 #> 5260 TCGA-DD-A73A-01 0 728 0 728 0 728 0 728 #> 5261 TCGA-DD-A73B-01 1 283 1 283 1 240 1 240 #> 5262 TCGA-DD-A73C-01 0 701 0 701 1 566 1 566 #> 5263 TCGA-DD-A73D-01 0 693 0 693 1 592 1 592 #> 5264 TCGA-DD-A73E-01 0 44 0 44 0 44 0 44 #> 5265 TCGA-DD-A73F-01 0 1085 0 1085 0 1085 0 1085 #> 5266 TCGA-DD-A73G-01 0 3478 0 3478 0 3478 0 3478 #> 5267 TCGA-DD-AA3A-01 1 410 0 410 0 410 0 410 #> 5268 TCGA-DD-AAC8-01 1 16 0 16 0 16 0 16 #> 5269 TCGA-DD-AAC9-01 0 347 0 347 0 347 0 347 #> 5270 TCGA-DD-AACA-02 0 2301 0 2301 1 776 1 776 #> 5271 TCGA-DD-AACA-01 0 2301 0 2301 1 776 1 776 #> 5272 TCGA-DD-AACB-01 0 2324 0 2324 0 2324 0 2324 #> 5273 TCGA-DD-AACC-01 1 1685 1 1685 1 537 1 537 #> 5274 TCGA-DD-AACE-01 0 2184 0 2184 1 1279 1 1279 #> 5275 TCGA-DD-AACF-01 1 365 1 365 1 119 1 119 #> 5276 TCGA-DD-AACG-01 1 469 1 469 1 125 1 125 #> 5277 TCGA-DD-AACH-01 1 195 0 195 1 83 1 83 #> 5278 TCGA-DD-AACI-01 0 1618 0 1618 1 1432 1 1432 #> 5279 TCGA-DD-AACJ-01 0 2102 0 2102 1 100 1 100 #> 5280 TCGA-DD-AACK-01 0 9 0 9 0 9 0 9 #> 5281 TCGA-DD-AACL-01 1 107 NA 107 0 107 0 107 #> 5282 TCGA-DD-AACN-01 0 1302 0 1302 1 357 1 357 #> 5283 TCGA-DD-AACO-01 0 1876 0 1876 1 479 1 479 #> 5284 TCGA-DD-AACP-01 0 415 0 415 0 415 0 415 #> 5285 TCGA-DD-AACQ-01 1 432 1 432 1 105 1 105 #> 5286 TCGA-DD-AACS-01 0 1804 0 1804 0 1804 0 1804 #> 5287 TCGA-DD-AACT-01 0 1562 0 1562 0 1562 0 1562 #> 5288 TCGA-DD-AACU-01 0 1567 0 1567 0 1567 0 1567 #> 5289 TCGA-DD-AACV-01 0 1531 0 1531 1 344 1 344 #> 5290 TCGA-DD-AACW-01 0 1424 0 1424 0 1424 0 1424 #> 5291 TCGA-DD-AACX-01 0 170 0 170 1 42 1 42 #> 5292 TCGA-DD-AACY-01 0 1450 0 1450 1 776 1 776 #> 5293 TCGA-DD-AACZ-01 1 171 0 171 1 88 1 88 #> 5294 TCGA-DD-AAD0-01 0 137 0 137 1 47 1 47 #> 5295 TCGA-DD-AAD1-01 0 564 0 564 NA NA 1 127 #> 5296 TCGA-DD-AAD2-01 0 658 0 658 0 658 0 658 #> 5297 TCGA-DD-AAD3-01 0 1295 0 1295 0 1295 0 1295 #> 5298 TCGA-DD-AAD5-01 0 1345 0 1345 1 130 1 130 #> 5299 TCGA-DD-AAD6-01 0 672 0 672 1 50 1 50 #> 5300 TCGA-DD-AAD8-01 0 1219 0 1219 0 1219 0 1219 #> 5301 TCGA-DD-AADA-01 0 1233 0 1233 0 1233 0 1233 #> 5302 TCGA-DD-AADB-01 0 1242 0 1242 0 1242 0 1242 #> 5303 TCGA-DD-AADC-01 1 425 1 425 1 101 1 101 #> 5304 TCGA-DD-AADD-01 0 1231 0 1231 0 1231 0 1231 #> 5305 TCGA-DD-AADF-01 1 115 0 115 0 115 0 115 #> 5306 TCGA-DD-AADG-01 0 1145 0 1145 1 270 1 270 #> 5307 TCGA-DD-AADI-01 0 1085 0 1085 0 1085 0 1085 #> 5308 TCGA-DD-AADJ-01 0 1066 0 1066 0 1066 0 1066 #> 5309 TCGA-DD-AADK-01 0 1049 0 1049 0 1049 0 1049 #> 5310 TCGA-DD-AADL-01 0 636 0 636 0 636 0 636 #> 5311 TCGA-DD-AADM-01 1 12 0 12 0 12 0 12 #> 5312 TCGA-DD-AADN-01 0 898 0 898 0 898 0 898 #> 5313 TCGA-DD-AADO-01 0 453 0 453 0 453 0 453 #> 5314 TCGA-DD-AADP-01 0 458 0 458 0 458 0 458 #> 5315 TCGA-DD-AADQ-01 0 436 0 436 0 436 0 436 #> 5316 TCGA-DD-AADR-01 0 2028 0 2028 1 1700 1 1700 #> 5317 TCGA-DD-AADS-01 0 474 0 474 0 474 0 474 #> 5318 TCGA-DD-AADU-01 0 554 0 554 0 554 0 554 #> 5319 TCGA-DD-AADV-01 0 574 0 574 0 574 0 574 #> 5320 TCGA-DD-AADW-01 0 587 0 587 1 386 1 386 #> 5321 TCGA-DD-AADY-01 0 555 0 555 0 555 0 555 #> 5322 TCGA-DD-AAE0-01 0 555 0 555 0 555 0 555 #> 5323 TCGA-DD-AAE1-01 0 552 0 552 0 552 0 552 #> 5324 TCGA-DD-AAE2-01 0 638 0 638 0 638 0 638 #> 5325 TCGA-DD-AAE3-01 0 566 0 566 0 566 0 566 #> 5326 TCGA-DD-AAE4-01 0 608 0 608 1 111 1 111 #> 5327 TCGA-DD-AAE6-01 0 141 0 141 1 105 1 105 #> 5328 TCGA-DD-AAE7-01 0 644 0 644 0 644 0 644 #> 5329 TCGA-DD-AAE9-01 0 722 0 722 0 722 0 722 #> 5330 TCGA-DD-AAEA-01 0 575 0 575 0 575 0 575 #> 5331 TCGA-DD-AAEB-01 0 478 0 478 0 478 0 478 #> 5332 TCGA-DD-AAED-01 0 763 0 763 1 198 1 198 #> 5333 TCGA-DD-AAEE-01 0 810 0 810 1 224 1 224 #> 5334 TCGA-DD-AAEG-01 0 719 0 719 0 719 0 719 #> 5335 TCGA-DD-AAEH-01 0 784 0 784 1 644 1 644 #> 5336 TCGA-DD-AAEI-01 0 1531 0 1531 1 491 1 491 #> 5337 TCGA-DD-AAEK-01 0 1067 0 1067 0 1067 0 1067 #> 5338 TCGA-DD-AAVP-01 0 2752 0 2752 1 903 1 903 #> 5339 TCGA-DD-AAVQ-01 0 2728 0 2728 1 1509 1 1509 #> 5340 TCGA-DD-AAVR-01 0 2513 0 2513 0 2513 0 2513 #> 5341 TCGA-DD-AAVS-01 0 1823 0 1823 0 1823 0 1823 #> 5342 TCGA-DD-AAVU-01 0 2202 0 2202 1 1630 1 1630 #> 5343 TCGA-DD-AAVV-01 0 2455 0 2455 0 2455 0 2455 #> 5344 TCGA-DD-AAVW-01 0 2317 0 2317 0 2317 0 2317 #> 5345 TCGA-DD-AAVX-01 0 1718 0 1718 1 393 1 393 #> 5346 TCGA-DD-AAVY-01 0 1970 0 1970 0 1970 0 1970 #> 5347 TCGA-DD-AAVZ-01 0 1900 0 1900 0 1900 0 1900 #> 5348 TCGA-DD-AAW0-01 0 2015 0 2015 0 2015 0 2015 #> 5349 TCGA-DD-AAW1-01 0 1989 0 1989 0 1989 0 1989 #> 5350 TCGA-DD-AAW2-01 0 1855 0 1855 1 391 1 391 #> 5351 TCGA-DD-AAW3-01 0 1633 0 1633 0 1633 0 1633 #> 5352 TCGA-ED-A459-01 0 910 0 910 0 910 0 910 #> 5353 TCGA-ED-A4XI-01 0 819 0 819 0 819 0 819 #> 5354 TCGA-ED-A5KG-01 0 854 0 854 0 854 1 110 #> 5355 TCGA-ED-A627-01 0 423 0 423 0 423 0 423 #> 5356 TCGA-ED-A66X-01 0 406 0 406 1 124 1 124 #> 5357 TCGA-ED-A66Y-01 1 296 0 296 0 296 0 296 #> 5358 TCGA-ED-A7PX-01 0 6 0 6 0 6 0 6 #> 5359 TCGA-ED-A7PY-01 0 390 0 390 0 390 0 390 #> 5360 TCGA-ED-A7PZ-01 0 6 0 6 0 6 0 6 #> 5361 TCGA-ED-A7XO-01 0 427 0 427 1 262 1 262 #> 5362 TCGA-ED-A7XP-01 0 400 0 400 1 187 1 187 #> 5363 TCGA-ED-A82E-01 0 408 0 408 0 408 0 408 #> 5364 TCGA-ED-A8O5-01 0 406 0 406 0 406 0 406 #> 5365 TCGA-ED-A8O6-01 1 56 0 56 0 56 0 56 #> 5366 TCGA-ED-A97K-01 0 6 0 6 0 6 0 6 #> 5367 TCGA-EP-A12J-01 0 570 0 570 0 570 0 570 #> 5368 TCGA-EP-A12J-11 0 570 0 570 0 570 0 570 #> 5369 TCGA-EP-A26S-01 0 608 0 608 NA NA 0 608 #> 5370 TCGA-EP-A26S-11 0 608 0 608 NA NA 0 608 #> 5371 TCGA-EP-A2KA-01 1 627 1 627 1 293 1 293 #> 5372 TCGA-EP-A2KB-01 1 596 1 596 1 161 1 161 #> 5373 TCGA-EP-A2KC-01 1 19 0 19 0 19 0 19 #> 5374 TCGA-EP-A3JL-01 0 303 0 303 NA NA 0 303 #> 5375 TCGA-EP-A3RK-01 0 363 0 363 NA NA 1 320 #> 5376 TCGA-EP-A3RK-11 0 363 0 363 NA NA 1 320 #> 5377 TCGA-ES-A2HS-01 1 688 0 688 0 688 0 688 #> 5378 TCGA-ES-A2HT-01 1 438 0 438 0 438 0 438 #> 5379 TCGA-ES-A2HT-11 1 438 0 438 0 438 0 438 #> 5380 TCGA-FV-A23B-01 1 1852 1 1852 1 1453 1 1453 #> 5381 TCGA-FV-A23B-11 1 1852 1 1852 1 1453 1 1453 #> 5382 TCGA-FV-A2QQ-01 0 729 0 729 0 729 0 729 #> 5383 TCGA-FV-A2QR-01 1 581 1 581 NA NA 1 561 #> 5384 TCGA-FV-A2QR-11 1 581 1 581 NA NA 1 561 #> 5385 TCGA-FV-A3I0-01 0 848 0 848 1 159 1 159 #> 5386 TCGA-FV-A3I0-11 0 848 0 848 1 159 1 159 #> 5387 TCGA-FV-A3I1-01 1 247 0 247 0 247 0 247 #> 5388 TCGA-FV-A3I1-11 1 247 0 247 0 247 0 247 #> 5389 TCGA-FV-A3R2-01 1 194 0 194 0 194 0 194 #> 5390 TCGA-FV-A3R2-11 1 194 0 194 0 194 0 194 #> 5391 TCGA-FV-A3R3-01 1 366 0 366 0 366 0 366 #> 5392 TCGA-FV-A495-01 0 1 0 1 0 1 0 1 #> 5393 TCGA-FV-A496-01 0 10 0 10 0 10 0 10 #> 5394 TCGA-FV-A4ZP-01 1 2486 0 2486 NA NA 0 2486 #> 5395 TCGA-FV-A4ZQ-01 0 12 0 12 0 12 0 12 #> 5396 TCGA-G3-A25S-01 1 416 1 416 NA NA 1 37 #> 5397 TCGA-G3-A25T-01 0 1553 0 1553 1 452 1 452 #> 5398 TCGA-G3-A25U-01 0 1636 0 1636 0 1636 0 1636 #> 5399 TCGA-G3-A25V-01 0 860 0 860 1 489 1 489 #> 5400 TCGA-G3-A25X-01 0 1779 0 1779 0 1779 0 1779 #> 5401 TCGA-G3-A25Y-01 1 452 1 452 1 355 1 355 #> 5402 TCGA-G3-A25Z-01 0 655 0 655 0 655 0 655 #> 5403 TCGA-G3-A3CG-01 0 673 0 673 NA NA 1 329 #> 5404 TCGA-G3-A3CH-01 0 780 0 780 1 116 1 116 #> 5405 TCGA-G3-A3CH-11 0 780 0 780 1 116 1 116 #> 5406 TCGA-G3-A3CI-01 0 180 0 180 0 180 0 180 #> 5407 TCGA-G3-A3CJ-01 0 594 0 594 1 296 1 296 #> 5408 TCGA-G3-A3CK-01 0 585 0 585 0 585 0 585 #> 5409 TCGA-G3-A5SI-01 1 768 1 768 1 348 1 348 #> 5410 TCGA-G3-A5SJ-01 0 698 0 698 1 308 1 308 #> 5411 TCGA-G3-A5SK-01 0 744 0 744 1 483 1 483 #> 5412 TCGA-G3-A5SL-01 0 621 0 621 0 621 0 621 #> 5413 TCGA-G3-A5SM-01 0 520 0 520 1 252 1 252 #> 5414 TCGA-G3-A6UC-01 0 671 0 671 1 639 1 639 #> 5415 TCGA-G3-A7M5-01 0 447 0 447 0 447 0 447 #> 5416 TCGA-G3-A7M6-01 0 632 0 632 1 293 1 293 #> 5417 TCGA-G3-A7M7-01 0 361 0 361 0 361 0 361 #> 5418 TCGA-G3-A7M8-01 0 430 0 430 NA NA 0 430 #> 5419 TCGA-G3-A7M9-01 1 56 NA 56 0 56 0 56 #> 5420 TCGA-G3-AAUZ-01 0 480 0 480 0 480 0 480 #> 5421 TCGA-G3-AAV0-01 0 476 0 476 0 476 0 476 #> 5422 TCGA-G3-AAV1-01 1 359 1 359 1 49 1 49 #> 5423 TCGA-G3-AAV2-01 0 372 0 372 0 372 0 372 #> 5424 TCGA-G3-AAV3-01 0 412 0 412 0 412 0 412 #> 5425 TCGA-G3-AAV4-01 1 27 0 27 0 27 0 27 #> 5426 TCGA-G3-AAV5-01 0 354 0 354 1 117 1 117 #> 5427 TCGA-G3-AAV6-01 1 65 1 65 1 44 1 44 #> 5428 TCGA-G3-AAV7-01 0 361 0 361 0 361 0 361 #> 5429 TCGA-GJ-A3OU-01 0 879 0 879 NA NA 1 879 #> 5430 TCGA-GJ-A6C0-01 1 31 NA 31 NA NA 0 31 #> 5431 TCGA-GJ-A9DB-01 1 67 NA 67 0 67 0 67 #> 5432 TCGA-HP-A5MZ-01 1 91 0 91 0 91 0 91 #> 5433 TCGA-HP-A5N0-01 1 1147 1 1147 1 179 1 179 #> 5434 TCGA-K7-A5RF-01 0 631 0 631 1 205 1 205 #> 5435 TCGA-K7-A5RG-01 0 519 0 519 0 519 0 519 #> 5436 TCGA-K7-A6G5-01 0 512 0 512 NA NA 0 512 #> 5437 TCGA-K7-AAU7-01 0 359 0 359 NA NA 1 58 #> 5438 TCGA-KR-A7K0-01 1 65 0 65 0 65 0 65 #> 5439 TCGA-KR-A7K2-01 0 829 0 829 0 829 0 829 #> 5440 TCGA-KR-A7K7-01 0 951 0 951 1 239 1 239 #> 5441 TCGA-KR-A7K8-01 0 906 0 906 0 906 0 906 #> 5442 TCGA-LG-A6GG-01 0 387 0 387 0 387 0 387 #> 5443 TCGA-LG-A9QC-01 0 425 0 425 0 425 0 425 #> 5444 TCGA-LG-A9QD-01 0 366 0 366 0 366 0 366 #> 5445 TCGA-MI-A75C-01 0 291 0 291 0 291 0 291 #> 5446 TCGA-MI-A75E-01 0 507 0 507 0 507 0 507 #> 5447 TCGA-MI-A75G-01 0 698 0 698 0 698 0 698 #> 5448 TCGA-MI-A75H-01 0 747 0 747 1 301 1 301 #> 5449 TCGA-MI-A75I-01 0 630 0 630 1 265 1 265 #> 5450 TCGA-MR-A520-01 0 229 0 229 NA NA 0 229 #> 5451 TCGA-MR-A8JO-01 0 330 0 330 NA NA 0 330 #> 5452 TCGA-NI-A4U2-01 1 1791 1 1791 1 106 1 106 #> 5453 TCGA-NI-A8LF-01 0 799 0 799 0 799 0 799 #> 5454 TCGA-O8-A75V-01 0 538 0 538 NA NA 0 538 #> 5455 TCGA-PD-A5DF-01 1 639 1 639 NA NA 1 639 #> 5456 TCGA-QA-A7B7-01 0 94 0 94 NA NA 1 88 #> 5457 TCGA-RC-A6M3-01 0 0 0 0 0 0 0 0 #> 5458 TCGA-RC-A6M4-01 0 22 0 22 NA NA 0 22 #> 5459 TCGA-RC-A6M5-01 0 15 0 15 NA NA 0 15 #> 5460 TCGA-RC-A6M6-01 0 9 0 9 NA NA 0 9 #> 5461 TCGA-RC-A7S9-01 0 640 0 640 0 640 0 640 #> 5462 TCGA-RC-A7SB-01 0 588 0 588 0 588 0 588 #> 5463 TCGA-RC-A7SF-01 0 579 0 579 1 502 1 502 #> 5464 TCGA-RC-A7SH-01 0 468 0 468 1 91 1 91 #> 5465 TCGA-RC-A7SK-01 0 472 0 472 1 312 1 312 #> 5466 TCGA-RG-A7D4-01 0 1098 0 1098 0 1098 0 1098 #> 5467 TCGA-T1-A6J8-01 0 23 0 23 NA NA 0 23 #> 5468 TCGA-UB-A7MA-01 0 848 0 848 NA NA 1 221 #> 5469 TCGA-UB-A7MB-01 0 601 0 601 1 48 1 48 #> 5470 TCGA-UB-A7MC-01 0 500 0 500 1 359 1 359 #> 5471 TCGA-UB-A7MD-01 1 52 0 52 0 52 0 52 #> 5472 TCGA-UB-A7ME-01 0 486 0 486 0 486 0 486 #> 5473 TCGA-UB-A7MF-01 1 214 1 214 1 133 1 133 #> 5474 TCGA-UB-AA0U-01 0 327 0 327 NA NA 1 106 #> 5475 TCGA-UB-AA0V-01 0 314 0 314 0 314 0 314 #> 5476 TCGA-WJ-A86L-01 0 345 0 345 0 345 0 345 #> 5477 TCGA-WQ-A9G7-01 0 30 0 30 0 30 0 30 #> 5478 TCGA-WQ-AB4B-01 0 395 0 395 1 273 1 273 #> 5479 TCGA-WX-AA44-01 0 615 0 615 NA NA 1 246 #> 5480 TCGA-WX-AA46-01 0 756 0 756 0 756 0 756 #> 5481 TCGA-WX-AA47-01 1 556 1 556 1 103 1 103 #> 5482 TCGA-XR-A8TC-01 0 1339 0 1339 0 1339 0 1339 #> 5483 TCGA-XR-A8TD-01 0 1030 0 1030 0 1030 0 1030 #> 5484 TCGA-XR-A8TE-01 0 925 0 925 1 210 1 210 #> 5485 TCGA-XR-A8TF-01 1 693 0 693 1 231 1 231 #> 5486 TCGA-XR-A8TG-01 0 898 0 898 1 350 1 350 #> 5487 TCGA-YA-A8S7-01 1 412 1 412 1 398 1 398 #> 5488 TCGA-ZP-A9CV-01 1 1088 1 1088 NA NA 1 1088 #> 5489 TCGA-ZP-A9CY-01 0 782 0 782 0 782 0 782 #> 5490 TCGA-ZP-A9CZ-01 0 706 0 706 0 706 0 706 #> 5491 TCGA-ZP-A9D0-01 0 1091 0 1091 0 1091 0 1091 #> 5492 TCGA-ZP-A9D1-01 0 21 0 21 0 21 0 21 #> 5493 TCGA-ZP-A9D2-01 1 765 1 765 1 315 1 315 #> 5494 TCGA-ZP-A9D4-01 0 395 0 395 0 395 0 395 #> 5495 TCGA-ZS-A9CD-01 1 1386 NA 1386 1 371 1 371 #> 5496 TCGA-ZS-A9CE-01 0 1241 0 1241 0 1241 1 892 #> 5497 TCGA-ZS-A9CF-02 0 2412 0 2412 1 636 1 636 #> 5498 TCGA-ZS-A9CF-01 0 2412 0 2412 1 636 1 636 #> 5499 TCGA-ZS-A9CG-01 0 341 0 341 0 341 0 341 #> 5500 TCGA-05-4244-01 0 0 0 0 NA NA 0 0 #> 5501 TCGA-05-4250-01 1 121 NA 121 NA NA 0 121 #> 5502 TCGA-05-4382-01 0 607 0 607 1 334 1 334 #> 5503 TCGA-05-4384-01 0 426 0 426 NA NA 1 183 #> 5504 TCGA-05-4389-01 0 1369 0 1369 NA NA 0 1369 #> 5505 TCGA-05-4390-01 0 1126 0 1126 NA NA 1 395 #> 5506 TCGA-05-4395-01 1 0 0 0 NA NA 0 0 #> 5507 TCGA-05-4396-01 1 303 NA 303 NA NA 0 303 #> 5508 TCGA-05-4397-01 1 731 NA 731 NA NA 0 731 #> 5509 TCGA-05-4398-01 0 1431 0 1431 0 1431 0 1431 #> 5510 TCGA-05-4402-01 1 244 0 244 NA NA 0 244 #> 5511 TCGA-05-4403-01 0 578 0 578 NA NA 0 578 #> 5512 TCGA-05-4405-01 0 610 0 610 NA NA 0 610 #> 5513 TCGA-05-4410-01 0 0 0 0 NA NA 0 0 #> 5514 TCGA-05-4415-01 1 91 1 91 NA NA 1 60 #> 5515 TCGA-05-4417-01 0 455 0 455 NA NA 0 455 #> 5516 TCGA-05-4418-01 1 274 NA 274 NA NA 0 274 #> 5517 TCGA-05-4420-01 0 912 0 912 0 912 0 912 #> 5518 TCGA-05-4422-01 0 365 0 365 NA NA 0 365 #> 5519 TCGA-05-4424-01 0 913 0 913 NA NA 1 153 #> 5520 TCGA-05-4425-01 0 669 0 669 NA NA 0 669 #> 5521 TCGA-05-4426-01 0 791 0 791 1 457 1 457 #> 5522 TCGA-05-4427-01 0 791 0 791 0 791 0 791 #> 5523 TCGA-05-4430-01 0 761 0 761 NA NA 0 761 #> 5524 TCGA-05-4432-01 0 761 0 761 0 761 0 761 #> 5525 TCGA-05-4433-01 0 730 0 730 NA NA 0 730 #> 5526 TCGA-05-4434-01 1 457 NA 457 NA NA 0 457 #> 5527 TCGA-05-5420-01 0 457 0 457 NA NA 1 245 #> 5528 TCGA-05-5423-01 0 151 0 151 NA NA 0 151 #> 5529 TCGA-05-5425-01 0 882 0 882 NA NA 1 486 #> 5530 TCGA-05-5428-01 0 670 0 670 0 670 0 670 #> 5531 TCGA-05-5429-01 1 275 0 275 NA NA 0 275 #> 5532 TCGA-05-5715-01 0 62 0 62 NA NA 0 62 #> 5533 TCGA-35-3615-01 0 14 0 14 NA NA 0 14 #> 5534 TCGA-35-4122-01 0 225 0 225 NA NA 0 225 #> 5535 TCGA-35-4123-01 0 182 0 182 NA NA 0 182 #> 5536 TCGA-35-5375-01 0 264 0 264 NA NA 0 264 #> 5537 TCGA-38-4625-01 0 2973 0 2973 0 2973 0 2973 #> 5538 TCGA-38-4625-11 0 2973 0 2973 0 2973 0 2973 #> 5539 TCGA-38-4626-01 0 3674 0 3674 0 3674 1 2518 #> 5540 TCGA-38-4626-11 0 3674 0 3674 0 3674 1 2518 #> 5541 TCGA-38-4627-01 1 1147 NA 1147 0 1147 0 1147 #> 5542 TCGA-38-4627-11 1 1147 NA 1147 0 1147 0 1147 #> 5543 TCGA-38-4628-01 1 1492 1 1492 1 1083 1 1083 #> 5544 TCGA-38-4629-01 1 864 1 864 1 379 1 379 #> 5545 TCGA-38-4630-01 1 1073 1 1073 1 524 1 524 #> 5546 TCGA-38-4631-01 1 354 1 354 NA NA 1 354 #> 5547 TCGA-38-4632-01 1 1357 1 1357 NA NA 1 680 #> 5548 TCGA-38-4632-11 1 1357 1 1357 NA NA 1 680 #> 5549 TCGA-38-6178-01 0 448 0 448 NA NA 0 448 #> 5550 TCGA-38-7271-01 1 800 1 800 1 304 1 304 #> 5551 TCGA-38-A44F-01 0 133 0 133 0 133 0 133 #> 5552 TCGA-44-2655-01 0 1324 0 1324 0 1324 1 1009 #> 5553 TCGA-44-2655-11 0 1324 0 1324 0 1324 1 1009 #> 5554 TCGA-44-2656-01 0 1429 0 1429 0 1429 1 568 #> 5555 TCGA-44-2657-01 0 1351 0 1351 0 1351 0 1351 #> 5556 TCGA-44-2657-11 0 1351 0 1351 0 1351 0 1351 #> 5557 TCGA-44-2659-01 0 1367 0 1367 1 1146 1 1146 #> 5558 TCGA-44-2661-01 0 1159 0 1159 0 1159 0 1159 #> 5559 TCGA-44-2661-11 0 1159 0 1159 0 1159 0 1159 #> 5560 TCGA-44-2662-11 0 1280 0 1280 NA NA 1 245 #> 5561 TCGA-44-2662-01 0 1280 0 1280 NA NA 1 245 #> 5562 TCGA-44-2665-11 0 1301 0 1301 NA NA 0 1301 #> 5563 TCGA-44-2665-01 0 1301 0 1301 NA NA 0 1301 #> 5564 TCGA-44-2666-01 1 97 1 97 NA NA 1 97 #> 5565 TCGA-44-2668-11 1 761 1 761 1 433 1 433 #> 5566 TCGA-44-2668-01 1 761 1 761 1 433 1 433 #> 5567 TCGA-44-3396-01 0 1130 0 1130 0 1130 0 1130 #> 5568 TCGA-44-3396-11 0 1130 0 1130 0 1130 0 1130 #> 5569 TCGA-44-3398-01 0 1163 0 1163 0 1163 0 1163 #> 5570 TCGA-44-3398-11 0 1163 0 1163 0 1163 0 1163 #> 5571 TCGA-44-3917-01 0 1183 0 1183 0 1183 0 1183 #> 5572 TCGA-44-3918-01 0 1036 0 1036 1 511 1 511 #> 5573 TCGA-44-3919-01 1 1026 1 1026 1 921 1 921 #> 5574 TCGA-44-4112-01 1 808 1 808 1 619 1 619 #> 5575 TCGA-44-5643-01 0 1013 0 1013 NA NA 0 1013 #> 5576 TCGA-44-5644-01 0 863 0 863 0 863 0 863 #> 5577 TCGA-44-5645-11 0 852 0 852 0 852 0 852 #> 5578 TCGA-44-5645-01 0 852 0 852 0 852 0 852 #> 5579 TCGA-44-6144-11 0 723 0 723 1 399 1 399 #> 5580 TCGA-44-6145-01 0 595 0 595 0 595 0 595 #> 5581 TCGA-44-6145-11 0 595 0 595 0 595 0 595 #> 5582 TCGA-44-6146-11 0 728 0 728 1 631 1 631 #> 5583 TCGA-44-6146-01 0 728 0 728 1 631 1 631 #> 5584 TCGA-44-6147-11 0 845 0 845 0 845 0 845 #> 5585 TCGA-44-6147-01 0 845 0 845 0 845 0 845 #> 5586 TCGA-44-6148-01 0 704 0 704 0 704 0 704 #> 5587 TCGA-44-6148-11 0 704 0 704 0 704 0 704 #> 5588 TCGA-44-6774-01 0 658 0 658 0 658 0 658 #> 5589 TCGA-44-6775-01 0 705 0 705 1 684 1 684 #> 5590 TCGA-44-6776-01 0 2616 0 2616 0 2616 0 2616 #> 5591 TCGA-44-6776-11 0 2616 0 2616 0 2616 0 2616 #> 5592 TCGA-44-6777-01 1 987 0 987 0 987 0 987 #> 5593 TCGA-44-6777-11 1 987 0 987 0 987 0 987 #> 5594 TCGA-44-6778-01 0 1864 0 1864 0 1864 0 1864 #> 5595 TCGA-44-6778-11 0 1864 0 1864 0 1864 0 1864 #> 5596 TCGA-44-6779-01 1 500 1 500 NA NA 1 232 #> 5597 TCGA-44-7659-01 0 691 0 691 0 691 0 691 #> 5598 TCGA-44-7660-01 0 592 0 592 NA NA 1 253 #> 5599 TCGA-44-7661-01 1 557 1 557 1 335 1 335 #> 5600 TCGA-44-7662-01 0 218 0 218 0 218 0 218 #> 5601 TCGA-44-7667-01 0 1097 0 1097 0 1097 0 1097 #> 5602 TCGA-44-7669-01 1 574 1 574 1 390 1 390 #> 5603 TCGA-44-7670-01 0 882 0 882 0 882 0 882 #> 5604 TCGA-44-7671-01 0 889 0 889 1 883 1 883 #> 5605 TCGA-44-7672-01 0 719 0 719 0 719 0 719 #> 5606 TCGA-44-8117-01 0 385 0 385 0 385 0 385 #> 5607 TCGA-44-8119-01 0 285 0 285 0 285 0 285 #> 5608 TCGA-44-8120-01 0 260 0 260 0 260 0 260 #> 5609 TCGA-44-A479-01 0 486 0 486 0 486 1 437 #> 5610 TCGA-44-A47A-01 0 466 0 466 1 397 1 397 #> 5611 TCGA-44-A47B-01 0 287 0 287 0 287 0 287 #> 5612 TCGA-44-A47G-01 0 351 0 351 0 351 0 351 #> 5613 TCGA-44-A4SS-01 0 415 0 415 0 415 0 415 #> 5614 TCGA-44-A4SU-01 1 409 1 409 1 260 1 260 #> 5615 TCGA-49-4486-01 1 2318 1 2318 1 2045 1 2045 #> 5616 TCGA-49-4487-01 1 855 1 855 1 697 1 697 #> 5617 TCGA-49-4488-01 1 869 NA 869 NA NA 1 634 #> 5618 TCGA-49-4490-01 1 385 1 385 NA NA 1 385 #> 5619 TCGA-49-4490-11 1 385 1 385 NA NA 1 385 #> 5620 TCGA-49-4494-01 1 1081 1 1081 NA NA 1 1081 #> 5621 TCGA-49-4501-01 1 1421 1 1421 1 545 1 545 #> 5622 TCGA-49-4505-01 1 428 1 428 1 417 1 417 #> 5623 TCGA-49-4506-01 1 999 NA 999 1 692 1 692 #> 5624 TCGA-49-4507-01 1 268 1 268 NA NA 1 158 #> 5625 TCGA-49-4510-01 1 896 1 896 NA NA 1 502 #> 5626 TCGA-49-4512-01 1 905 1 905 NA NA 1 905 #> 5627 TCGA-49-4512-11 1 905 1 905 NA NA 1 905 #> 5628 TCGA-49-4514-01 0 1700 0 1700 0 1700 0 1700 #> 5629 TCGA-49-6742-01 1 488 1 488 NA NA 1 214 #> 5630 TCGA-49-6742-11 1 488 1 488 NA NA 1 214 #> 5631 TCGA-49-6743-01 0 1621 0 1621 0 1621 0 1621 #> 5632 TCGA-49-6743-11 0 1621 0 1621 0 1621 0 1621 #> 5633 TCGA-49-6744-01 0 1683 0 1683 0 1683 0 1683 #> 5634 TCGA-49-6744-11 0 1683 0 1683 0 1683 0 1683 #> 5635 TCGA-49-6745-01 0 522 0 522 NA NA 0 522 #> 5636 TCGA-49-6745-11 0 522 0 522 NA NA 0 522 #> 5637 TCGA-49-6761-01 0 354 0 354 0 354 0 354 #> 5638 TCGA-49-6761-11 0 354 0 354 0 354 0 354 #> 5639 TCGA-49-6767-01 0 677 0 677 NA NA 0 677 #> 5640 TCGA-49-AAQV-01 1 677 0 677 1 509 1 509 #> 5641 TCGA-49-AAR0-01 0 4765 0 4765 0 4765 0 4765 #> 5642 TCGA-49-AAR2-01 0 2224 0 2224 0 2224 0 2224 #> 5643 TCGA-49-AAR3-01 0 1893 0 1893 1 1893 1 1893 #> 5644 TCGA-49-AAR4-01 1 879 1 879 NA NA 1 879 #> 5645 TCGA-49-AAR9-01 1 260 1 260 NA NA 1 260 #> 5646 TCGA-49-AARE-01 1 1229 1 1229 1 388 1 388 #> 5647 TCGA-49-AARN-01 1 1135 NA 1135 0 1135 0 1135 #> 5648 TCGA-49-AARO-01 0 3759 0 3759 1 1144 1 1144 #> 5649 TCGA-49-AARQ-01 0 6732 0 6732 0 6732 0 6732 #> 5650 TCGA-49-AARR-01 0 4992 0 4992 1 4812 1 1099 #> 5651 TCGA-4B-A93V-01 1 300 1 300 NA NA 1 251 #> 5652 TCGA-50-5044-01 1 624 1 624 NA NA 1 483 #> 5653 TCGA-50-5045-01 1 2174 1 2174 NA NA 1 1433 #> 5654 TCGA-50-5049-01 0 3094 0 3094 NA NA 1 1568 #> 5655 TCGA-50-5051-01 1 478 1 478 NA NA 1 184 #> 5656 TCGA-50-5055-01 1 1830 1 1830 NA NA 1 771 #> 5657 TCGA-50-5066-02 0 1442 0 1442 1 477 1 477 #> 5658 TCGA-50-5066-01 0 1442 0 1442 1 477 1 477 #> 5659 TCGA-50-5068-01 1 1499 1 1499 NA NA 1 686 #> 5660 TCGA-50-5072-01 1 250 1 250 NA NA 1 213 #> 5661 TCGA-50-5930-01 1 282 1 282 NA NA 1 177 #> 5662 TCGA-50-5930-11 1 282 1 282 NA NA 1 177 #> 5663 TCGA-50-5931-01 1 434 1 434 NA NA 1 425 #> 5664 TCGA-50-5931-11 1 434 1 434 NA NA 1 425 #> 5665 TCGA-50-5932-01 1 1235 1 1235 NA NA 1 1090 #> 5666 TCGA-50-5932-11 1 1235 1 1235 NA NA 1 1090 #> 5667 TCGA-50-5933-01 1 2393 0 2393 0 2393 0 2393 #> 5668 TCGA-50-5933-11 1 2393 0 2393 0 2393 0 2393 #> 5669 TCGA-50-5935-01 1 653 0 653 0 653 0 653 #> 5670 TCGA-50-5935-11 1 653 0 653 0 653 0 653 #> 5671 TCGA-50-5936-01 1 257 1 257 NA NA 1 150 #> 5672 TCGA-50-5936-11 1 257 1 257 NA NA 1 150 #> 5673 TCGA-50-5939-01 1 460 0 460 0 460 0 460 #> 5674 TCGA-50-5939-11 1 460 0 460 0 460 0 460 #> 5675 TCGA-50-5941-01 0 1474 0 1474 0 1474 0 1474 #> 5676 TCGA-50-5942-01 0 1847 0 1847 NA NA 1 1378 #> 5677 TCGA-50-5944-01 0 1750 0 1750 0 1750 0 1750 #> 5678 TCGA-50-5946-02 0 1617 0 1617 NA NA 1 221 #> 5679 TCGA-50-5946-01 0 1617 0 1617 NA NA 1 221 #> 5680 TCGA-50-6590-01 1 1288 0 1288 0 1288 0 1288 #> 5681 TCGA-50-6591-01 1 119 1 119 NA NA 1 119 #> 5682 TCGA-50-6592-01 1 777 1 777 NA NA 1 777 #> 5683 TCGA-50-6593-01 1 336 1 336 NA NA 1 266 #> 5684 TCGA-50-6594-01 1 370 1 370 NA NA 1 285 #> 5685 TCGA-50-6595-01 1 189 1 189 NA NA 1 182 #> 5686 TCGA-50-6595-11 1 189 1 189 NA NA 1 182 #> 5687 TCGA-50-6597-01 1 1268 0 1268 NA NA 0 1268 #> 5688 TCGA-50-6673-01 1 22 NA 22 NA NA 0 22 #> 5689 TCGA-50-7109-01 1 308 1 308 NA NA 1 15 #> 5690 TCGA-50-8457-01 0 1125 0 1125 0 1125 0 1125 #> 5691 TCGA-50-8459-01 0 1119 0 1119 NA NA 1 432 #> 5692 TCGA-50-8460-01 0 829 0 829 0 829 0 829 #> 5693 TCGA-53-7624-01 1 1043 1 1043 NA NA 1 400 #> 5694 TCGA-53-7626-01 1 929 1 929 NA NA 1 865 #> 5695 TCGA-53-7813-01 0 424 0 424 NA NA 0 424 #> 5696 TCGA-53-A4EZ-01 0 1071 0 1071 NA NA 0 1071 #> 5697 TCGA-55-1592-01 1 701 1 701 1 452 1 452 #> 5698 TCGA-55-1594-01 0 1178 0 1178 NA NA 0 1178 #> 5699 TCGA-55-1595-01 0 1479 0 1479 0 1479 0 1479 #> 5700 TCGA-55-1596-01 0 2065 0 2065 0 2065 0 2065 #> 5701 TCGA-55-5899-01 0 930 0 930 0 930 0 930 #> 5702 TCGA-55-6543-01 0 435 0 435 0 435 0 435 #> 5703 TCGA-55-6642-01 0 2449 0 2449 0 2449 0 2449 #> 5704 TCGA-55-6712-01 1 171 1 171 NA NA 1 171 #> 5705 TCGA-55-6968-01 1 1293 1 1293 NA NA 1 1293 #> 5706 TCGA-55-6968-11 1 1293 1 1293 NA NA 1 1293 #> 5707 TCGA-55-6969-01 0 1239 0 1239 NA NA 0 1239 #> 5708 TCGA-55-6969-11 0 1239 0 1239 NA NA 0 1239 #> 5709 TCGA-55-6970-01 1 464 1 464 NA NA 1 457 #> 5710 TCGA-55-6970-11 1 464 1 464 NA NA 1 457 #> 5711 TCGA-55-6971-01 0 1400 0 1400 0 1400 0 1400 #> 5712 TCGA-55-6971-11 0 1400 0 1400 0 1400 0 1400 #> 5713 TCGA-55-6972-01 1 1632 0 1632 0 1632 0 1632 #> 5714 TCGA-55-6972-11 1 1632 0 1632 0 1632 0 1632 #> 5715 TCGA-55-6975-01 1 118 1 118 NA NA 1 118 #> 5716 TCGA-55-6975-11 1 118 1 118 NA NA 1 118 #> 5717 TCGA-55-6978-01 1 176 1 176 NA NA 1 42 #> 5718 TCGA-55-6978-11 1 176 1 176 NA NA 1 42 #> 5719 TCGA-55-6979-01 1 237 1 237 NA NA 1 195 #> 5720 TCGA-55-6979-11 1 237 1 237 NA NA 1 195 #> 5721 TCGA-55-6980-01 0 2109 0 2109 0 2109 0 2109 #> 5722 TCGA-55-6980-11 0 2109 0 2109 0 2109 0 2109 #> 5723 TCGA-55-6981-01 1 1379 0 1379 0 1379 0 1379 #> 5724 TCGA-55-6981-11 1 1379 0 1379 0 1379 0 1379 #> 5725 TCGA-55-6982-01 1 995 1 995 NA NA 1 183 #> 5726 TCGA-55-6982-11 1 995 1 995 NA NA 1 183 #> 5727 TCGA-55-6983-01 0 2823 0 2823 0 2823 0 2823 #> 5728 TCGA-55-6983-11 0 2823 0 2823 0 2823 0 2823 #> 5729 TCGA-55-6984-01 1 760 1 760 1 724 1 724 #> 5730 TCGA-55-6984-11 1 760 1 760 1 724 1 724 #> 5731 TCGA-55-6985-01 0 1233 0 1233 0 1233 0 1233 #> 5732 TCGA-55-6985-11 0 1233 0 1233 0 1233 0 1233 #> 5733 TCGA-55-6986-01 0 3261 0 3261 0 3261 0 3261 #> 5734 TCGA-55-6986-11 0 3261 0 3261 0 3261 0 3261 #> 5735 TCGA-55-6987-01 0 2137 0 2137 0 2137 0 2137 #> 5736 TCGA-55-7227-01 1 952 1 952 1 255 1 255 #> 5737 TCGA-55-7281-01 0 872 0 872 1 339 1 339 #> 5738 TCGA-55-7283-01 0 609 0 609 NA NA 0 609 #> 5739 TCGA-55-7284-01 1 243 1 243 1 231 1 231 #> 5740 TCGA-55-7570-01 0 824 0 824 0 824 0 824 #> 5741 TCGA-55-7573-01 0 487 0 487 0 487 0 487 #> 5742 TCGA-55-7574-01 1 995 1 995 1 478 1 478 #> 5743 TCGA-55-7576-01 0 670 0 670 0 670 0 670 #> 5744 TCGA-55-7724-01 0 705 0 705 0 705 0 705 #> 5745 TCGA-55-7725-01 0 442 0 442 0 442 0 442 #> 5746 TCGA-55-7726-01 0 652 0 652 0 652 0 652 #> 5747 TCGA-55-7727-01 0 119 0 119 0 119 0 119 #> 5748 TCGA-55-7728-01 0 704 0 704 0 704 0 704 #> 5749 TCGA-55-7815-01 0 773 0 773 1 466 1 466 #> 5750 TCGA-55-7816-01 1 468 1 468 NA NA 1 468 #> 5751 TCGA-55-7903-01 0 567 0 567 0 567 0 567 #> 5752 TCGA-55-7907-01 1 343 1 343 1 294 1 294 #> 5753 TCGA-55-7910-01 0 1040 0 1040 1 1018 1 1018 #> 5754 TCGA-55-7911-01 0 537 0 537 0 537 1 515 #> 5755 TCGA-55-7913-01 1 561 1 561 1 480 1 480 #> 5756 TCGA-55-7914-01 1 187 1 187 NA NA 1 187 #> 5757 TCGA-55-7994-01 0 603 0 603 0 603 0 603 #> 5758 TCGA-55-7995-01 0 889 0 889 1 468 1 468 #> 5759 TCGA-55-8085-01 0 904 0 904 0 904 0 904 #> 5760 TCGA-55-8087-01 0 462 0 462 0 462 0 462 #> 5761 TCGA-55-8089-01 1 702 0 702 0 702 0 702 #> 5762 TCGA-55-8090-01 1 598 1 598 1 548 1 548 #> 5763 TCGA-55-8091-01 0 600 0 600 0 600 0 600 #> 5764 TCGA-55-8092-01 1 154 1 154 1 127 1 127 #> 5765 TCGA-55-8094-01 0 541 0 541 NA NA 0 541 #> 5766 TCGA-55-8096-01 1 719 1 719 1 566 1 566 #> 5767 TCGA-55-8097-01 0 476 0 476 0 476 0 476 #> 5768 TCGA-55-8203-01 0 547 0 547 0 547 0 547 #> 5769 TCGA-55-8204-01 0 515 0 515 0 515 0 515 #> 5770 TCGA-55-8205-01 0 599 0 599 NA NA 1 495 #> 5771 TCGA-55-8206-01 0 888 0 888 0 888 0 888 #> 5772 TCGA-55-8207-01 0 977 0 977 0 977 0 977 #> 5773 TCGA-55-8208-01 0 674 0 674 1 511 1 511 #> 5774 TCGA-55-8299-01 1 469 1 469 1 274 1 274 #> 5775 TCGA-55-8301-01 0 534 0 534 1 238 1 238 #> 5776 TCGA-55-8302-01 0 478 0 478 0 478 0 478 #> 5777 TCGA-55-8505-01 0 440 0 440 0 440 0 440 #> 5778 TCGA-55-8506-01 0 11 0 11 NA NA 0 11 #> 5779 TCGA-55-8507-01 0 418 0 418 0 418 0 418 #> 5780 TCGA-55-8508-01 0 617 0 617 0 617 0 617 #> 5781 TCGA-55-8510-01 0 539 0 539 0 539 0 539 #> 5782 TCGA-55-8511-01 0 552 0 552 1 460 1 460 #> 5783 TCGA-55-8512-01 1 607 1 607 NA NA 1 607 #> 5784 TCGA-55-8513-01 0 791 0 791 1 317 1 317 #> 5785 TCGA-55-8514-01 0 520 0 520 0 520 0 520 #> 5786 TCGA-55-8614-01 0 536 0 536 0 536 0 536 #> 5787 TCGA-55-8615-01 0 446 0 446 1 224 1 224 #> 5788 TCGA-55-8616-01 0 48 0 48 NA NA 0 48 #> 5789 TCGA-55-8619-01 0 416 0 416 0 416 0 416 #> 5790 TCGA-55-8620-01 1 375 1 375 NA NA 1 375 #> 5791 TCGA-55-8621-01 0 515 0 515 0 515 0 515 #> 5792 TCGA-55-A48X-01 0 689 0 689 0 689 1 615 #> 5793 TCGA-55-A48Y-01 0 630 0 630 0 630 0 630 #> 5794 TCGA-55-A48Z-01 0 651 0 651 NA NA 1 536 #> 5795 TCGA-55-A490-01 1 99 0 99 NA NA 0 99 #> 5796 TCGA-55-A491-01 0 626 0 626 0 626 0 626 #> 5797 TCGA-55-A492-01 0 596 0 596 0 596 0 596 #> 5798 TCGA-55-A493-01 0 28 0 28 NA NA 0 28 #> 5799 TCGA-55-A494-01 0 481 0 481 0 481 0 481 #> 5800 TCGA-55-A4DF-01 1 614 1 614 1 515 1 515 #> 5801 TCGA-55-A4DG-01 0 608 0 608 0 608 0 608 #> 5802 TCGA-55-A57B-01 0 546 0 546 0 546 0 546 #> 5803 TCGA-62-8394-01 1 139 0 139 0 139 0 139 #> 5804 TCGA-62-8395-01 0 1216 0 1216 1 395 1 395 #> 5805 TCGA-62-8397-01 0 1289 0 1289 0 1289 0 1289 #> 5806 TCGA-62-8398-01 1 444 0 444 0 444 0 444 #> 5807 TCGA-62-8399-01 0 2696 0 2696 0 2696 0 2696 #> 5808 TCGA-62-8402-01 1 1498 1 1498 1 772 1 772 #> 5809 TCGA-62-A46O-01 1 1454 1 1454 1 943 1 943 #> 5810 TCGA-62-A46P-01 1 594 0 594 1 267 1 267 #> 5811 TCGA-62-A46R-01 1 1725 0 1725 0 1725 0 1725 #> 5812 TCGA-62-A46S-01 1 1653 1 1653 1 527 1 527 #> 5813 TCGA-62-A46U-01 0 2067 0 2067 0 2067 0 2067 #> 5814 TCGA-62-A46Y-01 1 414 1 414 1 314 1 314 #> 5815 TCGA-62-A470-01 1 1194 1 1194 1 539 1 539 #> 5816 TCGA-62-A471-01 0 1246 0 1246 0 1246 0 1246 #> 5817 TCGA-62-A472-01 0 910 0 910 1 290 1 290 #> 5818 TCGA-64-1676-01 0 1728 0 1728 0 1728 0 1728 #> 5819 TCGA-64-1677-01 1 628 NA 628 NA NA 1 360 #> 5820 TCGA-64-1678-01 0 1189 0 1189 0 1189 0 1189 #> 5821 TCGA-64-1679-01 0 2488 0 2488 0 2488 0 2488 #> 5822 TCGA-64-1680-01 0 1126 0 1126 NA NA 0 1126 #> 5823 TCGA-64-1681-01 1 1167 NA 1167 NA NA 1 439 #> 5824 TCGA-64-5774-01 0 2676 0 2676 1 246 1 246 #> 5825 TCGA-64-5775-01 1 62 1 62 NA NA 1 62 #> 5826 TCGA-64-5778-01 0 1305 0 1305 1 962 1 962 #> 5827 TCGA-64-5779-01 0 864 0 864 NA NA 1 795 #> 5828 TCGA-64-5781-01 0 1559 0 1559 NA NA 1 96 #> 5829 TCGA-64-5815-01 0 866 0 866 0 866 0 866 #> 5830 TCGA-67-3770-01 0 610 0 610 NA NA 0 610 #> 5831 TCGA-67-3771-01 0 610 0 610 NA NA 0 610 #> 5832 TCGA-67-3772-01 0 573 0 573 NA NA 0 573 #> 5833 TCGA-67-3773-01 0 427 0 427 NA NA 0 427 #> 5834 TCGA-67-3774-01 0 385 0 385 NA NA 0 385 #> 5835 TCGA-67-4679-01 0 448 0 448 NA NA 0 448 #> 5836 TCGA-67-6215-01 0 174 0 174 0 174 0 174 #> 5837 TCGA-67-6216-01 0 141 0 141 0 141 0 141 #> 5838 TCGA-67-6217-01 0 422 0 422 NA NA 1 296 #> 5839 TCGA-69-7760-01 0 202 0 202 NA NA 0 202 #> 5840 TCGA-69-7761-01 0 186 0 186 NA NA 0 186 #> 5841 TCGA-69-7763-01 0 690 0 690 NA NA 0 690 #> 5842 TCGA-69-7764-01 0 414 0 414 NA NA 0 414 #> 5843 TCGA-69-7765-01 0 165 0 165 NA NA 0 165 #> 5844 TCGA-69-7973-01 0 230 0 230 0 230 0 230 #> 5845 TCGA-69-7974-01 0 184 0 184 NA NA 0 184 #> 5846 TCGA-69-7978-01 0 134 0 134 NA NA 0 134 #> 5847 TCGA-69-7979-01 0 408 0 408 NA NA 0 408 #> 5848 TCGA-69-7980-01 0 411 0 411 0 411 0 411 #> 5849 TCGA-69-8253-01 0 426 0 426 0 426 0 426 #> 5850 TCGA-69-8254-01 0 409 0 409 0 409 0 409 #> 5851 TCGA-69-8255-01 0 129 0 129 NA NA 0 129 #> 5852 TCGA-69-8453-01 0 813 0 813 NA NA 1 344 #> 5853 TCGA-69-A59K-01 0 591 0 591 NA NA 0 591 #> 5854 TCGA-71-6725-01 0 256 0 256 NA NA 1 164 #> 5855 TCGA-71-8520-01 1 210 1 210 1 179 1 179 #> 5856 TCGA-73-4658-01 1 1600 0 1600 0 1600 0 1600 #> 5857 TCGA-73-4659-01 1 711 1 711 NA NA 1 35 #> 5858 TCGA-73-4662-01 0 2515 0 2515 1 21 1 21 #> 5859 TCGA-73-4666-01 0 800 0 800 NA NA 0 800 #> 5860 TCGA-73-4668-01 0 467 0 467 1 236 1 236 #> 5861 TCGA-73-4670-01 0 131 0 131 NA NA 0 131 #> 5862 TCGA-73-4675-01 1 922 0 922 NA NA 1 361 #> 5863 TCGA-73-4676-01 1 281 1 281 NA NA 1 281 #> 5864 TCGA-73-4676-11 1 281 1 281 NA NA 1 281 #> 5865 TCGA-73-4677-01 1 38 1 38 NA NA 1 38 #> 5866 TCGA-73-7498-01 0 1189 0 1189 0 1189 0 1189 #> 5867 TCGA-73-7499-01 1 1531 0 1531 1 1447 1 1447 #> 5868 TCGA-73-A9RS-01 1 340 1 340 NA NA 1 107 #> 5869 TCGA-75-5122-01 1 NA 1 NA NA NA 1 NA #> 5870 TCGA-75-5125-01 1 2027 1 2027 1 1752 1 1752 #> 5871 TCGA-75-5126-01 0 NA 0 NA NA NA 0 NA #> 5872 TCGA-75-5146-01 0 2368 0 2368 0 2368 1 1773 #> 5873 TCGA-75-5147-01 0 1333 0 1333 0 1333 0 1333 #> 5874 TCGA-75-6203-01 0 NA 0 NA 0 NA 0 NA #> 5875 TCGA-75-6205-01 1 NA 1 NA NA NA 1 NA #> 5876 TCGA-75-6206-01 0 2590 0 2590 0 2590 0 2590 #> 5877 TCGA-75-6207-01 1 NA NA NA 0 NA 0 NA #> 5878 TCGA-75-6211-01 1 NA 1 NA NA NA 1 NA #> 5879 TCGA-75-6212-01 1 1516 1 1516 0 1516 1 1340 #> 5880 TCGA-75-6214-01 1 1115 1 1115 1 419 1 419 #> 5881 TCGA-75-7025-01 0 3305 0 3305 1 1481 1 1481 #> 5882 TCGA-75-7027-01 0 3059 0 3059 1 2949 1 2949 #> 5883 TCGA-75-7030-01 0 NA 0 NA 0 NA 0 NA #> 5884 TCGA-75-7031-01 0 NA 0 NA NA NA 0 NA #> 5885 TCGA-78-7143-01 1 4961 NA 4961 NA NA 1 1500 #> 5886 TCGA-78-7145-01 1 826 1 826 NA NA 1 422 #> 5887 TCGA-78-7146-01 1 173 NA 173 NA NA 0 173 #> 5888 TCGA-78-7147-01 1 586 1 586 NA NA 1 578 #> 5889 TCGA-78-7148-01 1 626 NA 626 NA NA 1 182 #> 5890 TCGA-78-7149-01 0 3940 0 3940 0 3940 0 3940 #> 5891 TCGA-78-7150-01 1 666 1 666 NA NA 1 139 #> 5892 TCGA-78-7152-01 1 1215 1 1215 1 1202 1 1202 #> 5893 TCGA-78-7153-01 0 3635 0 3635 0 3635 0 3635 #> 5894 TCGA-78-7154-01 1 593 NA 593 NA NA 0 593 #> 5895 TCGA-78-7155-01 1 1171 NA 1171 NA NA 1 209 #> 5896 TCGA-78-7156-01 1 976 NA 976 NA NA 0 976 #> 5897 TCGA-78-7158-01 1 179 1 179 NA NA 1 132 #> 5898 TCGA-78-7159-01 0 1974 0 1974 0 1974 0 1974 #> 5899 TCGA-78-7160-01 1 697 NA 697 NA NA 0 697 #> 5900 TCGA-78-7161-01 1 291 1 291 NA NA 1 162 #> 5901 TCGA-78-7162-01 1 3169 NA 3169 NA NA 1 2218 #> 5902 TCGA-78-7163-01 0 7248 0 7248 0 7248 0 7248 #> 5903 TCGA-78-7166-01 1 258 NA 258 NA NA 0 258 #> 5904 TCGA-78-7167-01 1 2681 1 2681 NA NA 1 726 #> 5905 TCGA-78-7220-01 1 807 1 807 NA NA 1 531 #> 5906 TCGA-78-7535-01 1 949 1 949 NA NA 1 809 #> 5907 TCGA-78-7536-01 1 244 1 244 NA NA 1 231 #> 5908 TCGA-78-7537-01 1 1622 NA 1622 NA NA 0 1622 #> 5909 TCGA-78-7539-01 0 791 0 791 1 688 1 688 #> 5910 TCGA-78-7540-01 1 1197 NA 1197 0 1197 0 1197 #> 5911 TCGA-78-7542-01 1 321 NA 321 NA NA 0 321 #> 5912 TCGA-78-7633-01 1 1528 1 1528 1 1450 1 1450 #> 5913 TCGA-78-8640-01 0 7062 0 7062 0 7062 0 7062 #> 5914 TCGA-78-8648-01 1 1209 NA 1209 NA NA 1 720 #> 5915 TCGA-78-8655-01 0 2360 0 2360 0 2360 0 2360 #> 5916 TCGA-78-8660-01 1 321 1 321 NA NA 1 242 #> 5917 TCGA-78-8662-01 1 3361 NA 3361 1 3044 1 3044 #> 5918 TCGA-80-5607-01 0 NA 0 NA NA NA 0 NA #> 5919 TCGA-80-5608-01 0 2832 0 2832 0 2832 0 2832 #> 5920 TCGA-80-5611-01 0 2595 0 2595 0 2595 0 2595 #> 5921 TCGA-83-5908-01 0 824 0 824 NA NA 0 824 #> 5922 TCGA-86-6562-01 1 376 1 376 NA NA 1 274 #> 5923 TCGA-86-6851-01 0 179 0 179 0 179 0 179 #> 5924 TCGA-86-7701-01 0 947 0 947 NA NA 1 424 #> 5925 TCGA-86-7711-01 1 1046 1 1046 NA NA 1 1046 #> 5926 TCGA-86-7713-01 0 1157 0 1157 0 1157 0 1157 #> 5927 TCGA-86-7714-01 1 625 1 625 NA NA 1 625 #> 5928 TCGA-86-7953-01 0 997 0 997 0 997 0 997 #> 5929 TCGA-86-7954-01 0 605 0 605 0 605 0 605 #> 5930 TCGA-86-7955-01 0 1072 0 1072 1 820 1 820 #> 5931 TCGA-86-8054-01 0 1148 0 1148 0 1148 0 1148 #> 5932 TCGA-86-8055-01 1 124 0 124 0 124 0 124 #> 5933 TCGA-86-8073-01 0 740 0 740 0 740 0 740 #> 5934 TCGA-86-8074-01 0 24 0 24 NA NA 0 24 #> 5935 TCGA-86-8075-01 1 694 0 694 1 199 1 199 #> 5936 TCGA-86-8076-01 0 993 0 993 0 993 0 993 #> 5937 TCGA-86-8278-01 0 944 0 944 1 29 1 29 #> 5938 TCGA-86-8279-01 0 949 0 949 0 949 0 949 #> 5939 TCGA-86-8280-01 0 701 0 701 0 701 0 701 #> 5940 TCGA-86-8281-01 0 0 0 0 0 0 0 0 #> 5941 TCGA-86-8358-01 0 653 0 653 0 653 0 653 #> 5942 TCGA-86-8359-01 1 444 0 444 NA NA 0 444 #> 5943 TCGA-86-8585-01 0 353 0 353 0 353 0 353 #> 5944 TCGA-86-8668-01 0 423 0 423 0 423 0 423 #> 5945 TCGA-86-8669-01 0 938 0 938 1 849 1 849 #> 5946 TCGA-86-8671-01 0 839 0 839 0 839 0 839 #> 5947 TCGA-86-8672-01 1 19 0 19 0 19 0 19 #> 5948 TCGA-86-8673-01 0 862 0 862 1 636 1 636 #> 5949 TCGA-86-8674-01 0 806 0 806 1 334 1 334 #> 5950 TCGA-86-A456-01 0 896 0 896 0 896 0 896 #> 5951 TCGA-86-A4D0-01 1 116 0 116 0 116 0 116 #> 5952 TCGA-86-A4JF-01 1 737 1 737 1 436 1 436 #> 5953 TCGA-86-A4P7-01 0 415 0 415 0 415 0 415 #> 5954 TCGA-86-A4P8-01 0 805 0 805 0 805 0 805 #> 5955 TCGA-91-6828-01 0 323 0 323 0 323 0 323 #> 5956 TCGA-91-6828-11 0 323 0 323 0 323 0 323 #> 5957 TCGA-91-6829-01 1 1258 0 1258 NA NA 0 1258 #> 5958 TCGA-91-6829-11 1 1258 0 1258 NA NA 0 1258 #> 5959 TCGA-91-6830-01 0 60 0 60 NA NA 1 18 #> 5960 TCGA-91-6831-01 0 310 0 310 0 310 0 310 #> 5961 TCGA-91-6831-11 0 310 0 310 0 310 0 310 #> 5962 TCGA-91-6835-01 0 79 0 79 0 79 0 79 #> 5963 TCGA-91-6835-11 0 79 0 79 0 79 0 79 #> 5964 TCGA-91-6836-01 0 417 0 417 0 417 0 417 #> 5965 TCGA-91-6836-11 0 417 0 417 0 417 0 417 #> 5966 TCGA-91-6840-01 0 372 0 372 0 372 0 372 #> 5967 TCGA-91-6847-01 0 842 0 842 NA NA 1 772 #> 5968 TCGA-91-6847-11 0 842 0 842 NA NA 1 772 #> 5969 TCGA-91-6848-01 0 224 0 224 0 224 0 224 #> 5970 TCGA-91-6849-01 0 35 0 35 NA NA 0 35 #> 5971 TCGA-91-6849-11 0 35 0 35 NA NA 0 35 #> 5972 TCGA-91-7771-01 0 492 0 492 0 492 0 492 #> 5973 TCGA-91-8496-01 0 505 0 505 0 505 0 505 #> 5974 TCGA-91-8497-01 1 434 0 434 0 434 0 434 #> 5975 TCGA-91-8499-01 0 36 0 36 NA NA 0 36 #> 5976 TCGA-91-A4BC-01 0 44 0 44 NA NA 0 44 #> 5977 TCGA-91-A4BD-01 0 603 0 603 0 603 0 603 #> 5978 TCGA-93-7347-01 0 683 0 683 0 683 0 683 #> 5979 TCGA-93-7348-01 0 531 0 531 0 531 0 531 #> 5980 TCGA-93-8067-01 0 186 0 186 0 186 0 186 #> 5981 TCGA-93-A4JN-01 0 718 0 718 NA NA 0 718 #> 5982 TCGA-93-A4JO-01 1 33 0 33 NA NA 0 33 #> 5983 TCGA-93-A4JP-01 0 578 0 578 NA NA 1 497 #> 5984 TCGA-93-A4JQ-01 0 526 0 526 0 526 0 526 #> 5985 TCGA-95-7039-01 0 1272 0 1272 1 1258 1 1258 #> 5986 TCGA-95-7043-01 1 503 1 503 NA NA 1 503 #> 5987 TCGA-95-7562-01 1 87 0 87 NA NA 0 87 #> 5988 TCGA-95-7567-01 0 568 0 568 NA NA 0 568 #> 5989 TCGA-95-7944-01 0 377 0 377 NA NA 0 377 #> 5990 TCGA-95-7947-01 0 477 0 477 0 477 0 477 #> 5991 TCGA-95-7948-01 0 476 0 476 0 476 0 476 #> 5992 TCGA-95-8039-01 0 830 0 830 1 228 1 228 #> 5993 TCGA-95-8494-01 0 84 0 84 0 84 0 84 #> 5994 TCGA-95-A4VK-01 0 651 0 651 NA NA 1 496 #> 5995 TCGA-95-A4VN-01 0 553 0 553 NA NA 0 553 #> 5996 TCGA-95-A4VP-01 0 605 0 605 NA NA 1 216 #> 5997 TCGA-97-7546-01 0 1285 0 1285 NA NA 1 1255 #> 5998 TCGA-97-7547-01 0 1965 0 1965 NA NA 1 775 #> 5999 TCGA-97-7552-01 0 1932 0 1932 NA NA 1 798 #> 6000 TCGA-97-7553-01 0 1870 0 1870 0 1870 0 1870 #> 6001 TCGA-97-7554-01 0 775 0 775 0 775 0 775 #> 6002 TCGA-97-7937-01 0 564 0 564 NA NA 0 564 #> 6003 TCGA-97-7938-01 1 18 0 18 0 18 0 18 #> 6004 TCGA-97-7941-01 0 484 0 484 0 484 0 484 #> 6005 TCGA-97-8171-01 0 568 0 568 NA NA 1 441 #> 6006 TCGA-97-8172-01 0 545 0 545 0 545 0 545 #> 6007 TCGA-97-8174-01 1 164 NA 164 NA NA 0 164 #> 6008 TCGA-97-8175-01 0 551 0 551 1 294 1 294 #> 6009 TCGA-97-8176-01 1 468 0 468 NA NA 1 39 #> 6010 TCGA-97-8177-01 0 499 0 499 NA NA 0 499 #> 6011 TCGA-97-8179-01 0 435 0 435 0 435 0 435 #> 6012 TCGA-97-8547-01 0 657 0 657 0 657 0 657 #> 6013 TCGA-97-8552-01 0 626 0 626 0 626 0 626 #> 6014 TCGA-97-A4LX-01 0 614 0 614 0 614 0 614 #> 6015 TCGA-97-A4M0-01 0 652 0 652 0 652 0 652 #> 6016 TCGA-97-A4M1-01 0 601 0 601 0 601 0 601 #> 6017 TCGA-97-A4M2-01 0 624 0 624 0 624 0 624 #> 6018 TCGA-97-A4M3-01 0 540 0 540 0 540 1 54 #> 6019 TCGA-97-A4M5-01 0 634 0 634 0 634 0 634 #> 6020 TCGA-97-A4M6-01 0 568 0 568 0 568 0 568 #> 6021 TCGA-97-A4M7-01 0 629 0 629 0 629 0 629 #> 6022 TCGA-99-7458-01 0 747 0 747 NA NA 0 747 #> 6023 TCGA-99-8025-01 0 1060 0 1060 0 1060 0 1060 #> 6024 TCGA-99-8028-01 0 1118 0 1118 0 1118 0 1118 #> 6025 TCGA-99-8032-01 0 44 0 44 0 44 0 44 #> 6026 TCGA-99-8033-01 1 656 1 656 NA NA 1 656 #> 6027 TCGA-99-AA5R-01 0 658 0 658 0 658 0 658 #> 6028 TCGA-J2-8192-01 0 739 0 739 NA NA 1 482 #> 6029 TCGA-J2-8194-01 0 724 0 724 NA NA 1 470 #> 6030 TCGA-J2-A4AD-01 1 550 1 550 NA NA 1 524 #> 6031 TCGA-J2-A4AE-01 0 1079 0 1079 0 1079 0 1079 #> 6032 TCGA-J2-A4AG-01 0 988 0 988 0 988 0 988 #> 6033 TCGA-L4-A4E5-01 0 578 0 578 0 578 0 578 #> 6034 TCGA-L4-A4E6-01 0 435 0 435 0 435 0 435 #> 6035 TCGA-L9-A443-01 1 193 0 193 0 193 0 193 #> 6036 TCGA-L9-A444-01 0 307 0 307 0 307 0 307 #> 6037 TCGA-L9-A50W-01 1 442 1 442 1 389 1 389 #> 6038 TCGA-L9-A5IP-01 1 58 1 58 NA NA 1 49 #> 6039 TCGA-L9-A743-01 0 664 0 664 0 664 0 664 #> 6040 TCGA-L9-A7SV-01 0 565 0 565 0 565 0 565 #> 6041 TCGA-L9-A8F4-01 0 476 0 476 NA NA 0 476 #> 6042 TCGA-MN-A4N1-01 0 827 0 827 0 827 0 827 #> 6043 TCGA-MN-A4N4-01 0 1175 0 1175 0 1175 0 1175 #> 6044 TCGA-MN-A4N5-01 0 84 0 84 0 84 0 84 #> 6045 TCGA-MP-A4SV-01 1 2620 NA 2620 0 2620 0 2620 #> 6046 TCGA-MP-A4SW-01 1 1778 NA 1778 0 1778 0 1778 #> 6047 TCGA-MP-A4SY-01 1 1501 0 1501 1 489 1 489 #> 6048 TCGA-MP-A4T4-01 1 2617 NA 2617 0 2617 0 2617 #> 6049 TCGA-MP-A4T6-01 1 1790 0 1790 0 1790 0 1790 #> 6050 TCGA-MP-A4T7-01 1 167 NA 167 NA NA 0 167 #> 6051 TCGA-MP-A4T8-01 1 161 NA 161 NA NA 0 161 #> 6052 TCGA-MP-A4T9-01 1 1265 1 1265 1 341 1 341 #> 6053 TCGA-MP-A4TA-01 1 950 1 950 1 725 1 725 #> 6054 TCGA-MP-A4TC-01 1 74 0 74 0 74 0 74 #> 6055 TCGA-MP-A4TD-01 1 307 NA 307 1 226 1 226 #> 6056 TCGA-MP-A4TE-01 1 896 1 896 1 226 1 226 #> 6057 TCGA-MP-A4TF-01 1 336 1 336 NA NA 1 195 #> 6058 TCGA-MP-A4TH-01 0 741 0 741 0 741 0 741 #> 6059 TCGA-MP-A4TI-01 1 429 1 429 NA NA 1 84 #> 6060 TCGA-MP-A4TJ-01 1 339 NA 339 0 339 0 339 #> 6061 TCGA-MP-A4TK-01 1 582 1 582 1 397 1 397 #> 6062 TCGA-MP-A5C7-01 0 2248 0 2248 0 2248 0 2248 #> 6063 TCGA-NJ-A4YF-01 0 2161 0 2161 NA NA 0 2161 #> 6064 TCGA-NJ-A4YG-01 0 2261 0 2261 NA NA 0 2261 #> 6065 TCGA-NJ-A4YI-01 1 4 NA 4 NA NA 0 4 #> 6066 TCGA-NJ-A4YP-01 0 50 0 50 NA NA 0 50 #> 6067 TCGA-NJ-A4YQ-01 0 1432 0 1432 NA NA 0 1432 #> 6068 TCGA-NJ-A55A-01 0 15 0 15 NA NA 0 15 #> 6069 TCGA-NJ-A55O-01 0 13 0 13 NA NA 0 13 #> 6070 TCGA-NJ-A55R-01 0 603 0 603 NA NA 0 603 #> 6071 TCGA-NJ-A7XG-01 0 617 0 617 NA NA 0 617 #> 6072 TCGA-O1-A52J-01 1 1798 1 1798 NA NA 1 898 #> 6073 TCGA-S2-AA1A-01 0 513 0 513 0 513 0 513 #> 6074 TCGA-18-3407-01 1 136 0 136 NA NA 0 136 #> 6075 TCGA-18-3408-01 1 2304 1 2304 NA NA 1 1793 #> 6076 TCGA-18-3409-01 0 3747 0 3747 0 3747 1 2291 #> 6077 TCGA-18-3410-01 1 146 0 146 NA NA 0 146 #> 6078 TCGA-18-3411-01 0 3576 0 3576 NA NA 0 3576 #> 6079 TCGA-18-3412-01 1 345 1 345 NA NA 1 273 #> 6080 TCGA-18-3414-01 1 716 0 716 NA NA 0 716 #> 6081 TCGA-18-3415-01 1 2803 0 2803 0 2803 0 2803 #> 6082 TCGA-18-3416-01 1 973 1 973 1 940 1 940 #> 6083 TCGA-18-3417-01 1 1097 0 1097 NA NA 0 1097 #> 6084 TCGA-18-3419-01 0 2811 0 2811 0 2811 0 2811 #> 6085 TCGA-18-3421-01 0 2645 0 2645 0 2645 0 2645 #> 6086 TCGA-18-4083-01 1 188 0 188 NA NA 0 188 #> 6087 TCGA-18-4086-01 1 85 0 85 NA NA 0 85 #> 6088 TCGA-18-4721-01 0 4694 0 4694 0 4694 0 4694 #> 6089 TCGA-18-5592-01 0 1519 0 1519 NA NA 0 1519 #> 6090 TCGA-18-5595-01 1 827 NA 827 NA NA 0 827 #> 6091 TCGA-21-1070-01 0 3636 0 3636 NA NA 0 3636 #> 6092 TCGA-21-1071-01 1 1426 1 1426 NA NA 1 993 #> 6093 TCGA-21-1072-01 0 3016 0 3016 NA NA 0 3016 #> 6094 TCGA-21-1075-01 0 2134 0 2134 NA NA 0 2134 #> 6095 TCGA-21-1076-01 0 1852 0 1852 NA NA 1 1575 #> 6096 TCGA-21-1077-01 1 1058 1 1058 NA NA 1 644 #> 6097 TCGA-21-1078-01 1 474 1 474 NA NA 1 257 #> 6098 TCGA-21-1079-01 1 965 1 965 NA NA 1 317 #> 6099 TCGA-21-1080-01 0 3724 0 3724 NA NA 0 3724 #> 6100 TCGA-21-1081-01 1 284 1 284 NA NA 1 284 #> 6101 TCGA-21-1082-01 0 3644 0 3644 NA NA 0 3644 #> 6102 TCGA-21-1083-01 1 1315 0 1315 NA NA 0 1315 #> 6103 TCGA-21-5782-01 1 962 NA 962 0 962 0 962 #> 6104 TCGA-21-5783-01 1 2680 NA 2680 NA NA 0 2680 #> 6105 TCGA-21-5784-01 0 1268 0 1268 0 1268 0 1268 #> 6106 TCGA-21-5786-01 0 1032 0 1032 1 817 1 817 #> 6107 TCGA-21-5787-01 1 329 1 329 NA NA 1 103 #> 6108 TCGA-21-A5DI-01 0 979 0 979 0 979 0 979 #> 6109 TCGA-22-0940-01 1 669 1 669 NA NA 1 669 #> 6110 TCGA-22-0944-01 1 223 0 223 NA NA 0 223 #> 6111 TCGA-22-1000-01 1 454 1 454 1 263 1 263 #> 6112 TCGA-22-1002-01 1 131 0 131 NA NA 0 131 #> 6113 TCGA-22-1005-01 1 1953 0 1953 0 1953 0 1953 #> 6114 TCGA-22-1011-01 1 53 0 53 NA NA 0 53 #> 6115 TCGA-22-1012-01 1 429 0 429 0 429 0 429 #> 6116 TCGA-22-1016-01 1 822 0 822 0 822 0 822 #> 6117 TCGA-22-1017-01 1 1485 1 1485 1 904 1 904 #> 6118 TCGA-22-4591-01 1 623 1 623 NA NA 1 443 #> 6119 TCGA-22-4593-01 1 1067 0 1067 NA NA 0 1067 #> 6120 TCGA-22-4593-11 1 1067 0 1067 NA NA 0 1067 #> 6121 TCGA-22-4594-01 1 1470 NA 1470 NA NA 0 1470 #> 6122 TCGA-22-4595-01 1 734 1 734 1 250 1 250 #> 6123 TCGA-22-4596-01 1 17 0 17 NA NA 0 17 #> 6124 TCGA-22-4599-01 1 1161 NA 1161 NA NA 0 1161 #> 6125 TCGA-22-4601-01 1 1057 1 1057 NA NA 1 525 #> 6126 TCGA-22-4604-01 1 399 1 399 NA NA 1 306 #> 6127 TCGA-22-4605-01 1 974 0 974 0 974 0 974 #> 6128 TCGA-22-4607-01 1 587 0 587 NA NA 0 587 #> 6129 TCGA-22-4609-01 1 291 0 291 0 291 0 291 #> 6130 TCGA-22-4609-11 1 291 0 291 0 291 0 291 #> 6131 TCGA-22-4613-01 1 358 NA 358 NA NA 0 358 #> 6132 TCGA-22-5471-01 0 1845 0 1845 1 229 1 229 #> 6133 TCGA-22-5471-11 0 1845 0 1845 1 229 1 229 #> 6134 TCGA-22-5472-01 1 1975 0 1975 1 746 1 746 #> 6135 TCGA-22-5472-11 1 1975 0 1975 1 746 1 746 #> 6136 TCGA-22-5473-01 1 1933 0 1933 1 1655 1 1655 #> 6137 TCGA-22-5474-01 1 445 0 445 0 445 0 445 #> 6138 TCGA-22-5477-01 1 1346 NA 1346 1 511 1 511 #> 6139 TCGA-22-5478-01 1 24 0 24 0 24 0 24 #> 6140 TCGA-22-5478-11 1 24 0 24 0 24 0 24 #> 6141 TCGA-22-5479-01 1 2625 NA 2625 NA NA 0 2625 #> 6142 TCGA-22-5480-01 1 2170 1 2170 1 1779 1 1779 #> 6143 TCGA-22-5481-01 1 2409 NA 2409 1 346 1 346 #> 6144 TCGA-22-5481-11 1 2409 NA 2409 1 346 1 346 #> 6145 TCGA-22-5482-01 1 357 0 357 0 357 0 357 #> 6146 TCGA-22-5482-11 1 357 0 357 0 357 0 357 #> 6147 TCGA-22-5483-01 1 573 1 573 1 568 1 568 #> 6148 TCGA-22-5483-11 1 573 1 573 1 568 1 568 #> 6149 TCGA-22-5485-01 1 916 1 916 1 840 1 840 #> 6150 TCGA-22-5489-01 1 1912 1 1912 1 428 1 428 #> 6151 TCGA-22-5489-11 1 1912 1 1912 1 428 1 428 #> 6152 TCGA-22-5491-01 1 1713 NA 1713 NA NA 0 1713 #> 6153 TCGA-22-5491-11 1 1713 NA 1713 NA NA 0 1713 #> 6154 TCGA-22-5492-01 1 506 NA 506 NA NA 0 506 #> 6155 TCGA-22-A5C4-01 0 671 0 671 0 671 0 671 #> 6156 TCGA-33-4532-01 1 3924 0 3924 0 3924 0 3924 #> 6157 TCGA-33-4533-01 0 4068 0 4068 0 4068 0 4068 #> 6158 TCGA-33-4538-01 1 2979 NA 2979 0 2979 0 2979 #> 6159 TCGA-33-4547-01 0 2419 0 2419 0 2419 0 2419 #> 6160 TCGA-33-4566-01 1 5287 NA 5287 NA NA 0 5287 #> 6161 TCGA-33-4582-01 1 3149 1 3149 1 2923 1 2923 #> 6162 TCGA-33-4583-01 1 4601 0 4601 0 4601 0 4601 #> 6163 TCGA-33-4586-01 1 428 NA 428 1 169 1 169 #> 6164 TCGA-33-4587-01 1 1656 1 1656 NA NA 1 1656 #> 6165 TCGA-33-4587-11 1 1656 1 1656 NA NA 1 1656 #> 6166 TCGA-33-4589-01 1 47 0 47 0 47 0 47 #> 6167 TCGA-33-6737-01 1 601 1 601 NA NA 1 601 #> 6168 TCGA-33-6737-11 1 601 1 601 NA NA 1 601 #> 6169 TCGA-33-6738-01 0 1927 0 1927 0 1927 0 1927 #> 6170 TCGA-33-A4WN-01 1 143 0 143 0 143 0 143 #> 6171 TCGA-33-A5GW-01 1 9 0 9 0 9 0 9 #> 6172 TCGA-33-AAS8-01 1 1114 0 1114 0 1114 0 1114 #> 6173 TCGA-33-AASB-01 1 211 1 211 NA NA 1 30 #> 6174 TCGA-33-AASD-01 1 3376 1 3376 NA NA 1 1912 #> 6175 TCGA-33-AASI-01 1 1344 1 1344 NA NA 1 1344 #> 6176 TCGA-33-AASJ-01 1 3600 1 3600 1 1135 1 1135 #> 6177 TCGA-33-AASL-01 1 826 1 826 NA NA 1 149 #> 6178 TCGA-34-2596-01 1 80 0 80 0 80 0 80 #> 6179 TCGA-34-2600-01 1 1874 0 1874 0 1874 0 1874 #> 6180 TCGA-34-2608-01 1 1000 0 1000 0 1000 0 1000 #> 6181 TCGA-34-5231-01 1 1984 0 1984 NA NA 0 1984 #> 6182 TCGA-34-5232-01 0 2471 0 2471 0 2471 0 2471 #> 6183 TCGA-34-5234-01 0 2271 0 2271 0 2271 0 2271 #> 6184 TCGA-34-5236-01 1 276 1 276 NA NA 1 113 #> 6185 TCGA-34-5239-01 0 1834 0 1834 1 1530 1 1530 #> 6186 TCGA-34-5240-01 0 1541 0 1541 0 1541 0 1541 #> 6187 TCGA-34-5241-01 1 515 0 515 NA NA 0 515 #> 6188 TCGA-34-5927-01 0 1361 0 1361 NA NA 1 245 #> 6189 TCGA-34-5928-01 0 1196 0 1196 0 1196 0 1196 #> 6190 TCGA-34-5929-01 1 151 0 151 NA NA 0 151 #> 6191 TCGA-34-7107-01 1 34 NA 34 NA NA 0 34 #> 6192 TCGA-34-7107-11 1 34 NA 34 NA NA 0 34 #> 6193 TCGA-34-8454-01 0 1180 0 1180 0 1180 0 1180 #> 6194 TCGA-34-8454-11 0 1180 0 1180 0 1180 0 1180 #> 6195 TCGA-34-8455-01 1 123 1 123 NA NA 1 123 #> 6196 TCGA-34-8456-01 0 804 0 804 0 804 0 804 #> 6197 TCGA-34-A5IX-01 0 1031 0 1031 0 1031 0 1031 #> 6198 TCGA-37-3783-01 0 122 0 122 NA NA 0 122 #> 6199 TCGA-37-3789-01 0 13 0 13 NA NA 0 13 #> 6200 TCGA-37-3792-01 0 12 0 12 NA NA 0 12 #> 6201 TCGA-37-4129-01 0 242 0 242 0 242 0 242 #> 6202 TCGA-37-4130-01 0 247 0 247 NA NA 0 247 #> 6203 TCGA-37-4132-01 0 227 0 227 NA NA 0 227 #> 6204 TCGA-37-4133-01 0 238 0 238 NA NA 0 238 #> 6205 TCGA-37-4135-01 0 207 0 207 NA NA 0 207 #> 6206 TCGA-37-4141-01 0 12 0 12 NA NA 0 12 #> 6207 TCGA-37-5819-01 0 103 0 103 NA NA 0 103 #> 6208 TCGA-37-A5EL-01 1 1143 1 1143 NA NA 1 946 #> 6209 TCGA-37-A5EM-01 0 867 0 867 0 867 0 867 #> 6210 TCGA-37-A5EN-01 0 660 0 660 0 660 0 660 #> 6211 TCGA-39-5011-01 0 4053 0 4053 1 565 1 565 #> 6212 TCGA-39-5019-01 0 3387 0 3387 1 378 1 378 #> 6213 TCGA-39-5021-01 1 2086 1 2086 1 1875 1 1875 #> 6214 TCGA-39-5022-01 1 1679 0 1679 NA NA 1 1448 #> 6215 TCGA-39-5024-01 0 2510 0 2510 0 2510 0 2510 #> 6216 TCGA-39-5027-01 0 3108 0 3108 0 3108 1 3081 #> 6217 TCGA-39-5028-01 1 52 NA 52 NA NA 0 52 #> 6218 TCGA-39-5029-01 1 740 1 740 NA NA 1 491 #> 6219 TCGA-39-5030-01 1 59 NA 59 0 59 0 59 #> 6220 TCGA-39-5031-01 1 1841 0 1841 0 1841 0 1841 #> 6221 TCGA-39-5034-01 1 1107 NA 1107 1 352 1 352 #> 6222 TCGA-39-5035-01 0 2080 0 2080 0 2080 0 2080 #> 6223 TCGA-39-5036-01 0 2165 0 2165 0 2165 0 2165 #> 6224 TCGA-39-5037-01 0 1690 0 1690 0 1690 0 1690 #> 6225 TCGA-39-5039-01 1 544 0 544 0 544 0 544 #> 6226 TCGA-39-5040-01 1 519 1 519 NA NA 1 442 #> 6227 TCGA-39-5040-11 1 519 1 519 NA NA 1 442 #> 6228 TCGA-43-2576-01 0 1223 0 1223 0 1223 0 1223 #> 6229 TCGA-43-2578-01 1 684 0 684 0 684 0 684 #> 6230 TCGA-43-2581-01 0 1176 0 1176 0 1176 0 1176 #> 6231 TCGA-43-3394-01 1 1190 1 1190 1 552 1 552 #> 6232 TCGA-43-3394-11 1 1190 1 1190 1 552 1 552 #> 6233 TCGA-43-3920-01 0 1007 0 1007 0 1007 0 1007 #> 6234 TCGA-43-5668-01 1 559 1 559 1 470 1 470 #> 6235 TCGA-43-5670-01 0 849 0 849 0 849 0 849 #> 6236 TCGA-43-5670-11 0 849 0 849 0 849 0 849 #> 6237 TCGA-43-6143-01 0 699 0 699 0 699 0 699 #> 6238 TCGA-43-6143-11 0 699 0 699 0 699 0 699 #> 6239 TCGA-43-6647-01 0 757 0 757 0 757 0 757 #> 6240 TCGA-43-6647-11 0 757 0 757 0 757 0 757 #> 6241 TCGA-43-6770-01 0 653 0 653 0 653 0 653 #> 6242 TCGA-43-6771-01 1 166 1 166 NA NA 1 154 #> 6243 TCGA-43-6771-11 1 166 1 166 NA NA 1 154 #> 6244 TCGA-43-6773-01 1 116 0 116 NA NA 0 116 #> 6245 TCGA-43-6773-11 1 116 0 116 NA NA 0 116 #> 6246 TCGA-43-7656-01 0 596 0 596 0 596 0 596 #> 6247 TCGA-43-7657-01 0 236 0 236 0 236 0 236 #> 6248 TCGA-43-7657-11 0 236 0 236 0 236 0 236 #> 6249 TCGA-43-7658-01 1 2378 1 2378 1 2305 1 2305 #> 6250 TCGA-43-7658-11 1 2378 1 2378 1 2305 1 2305 #> 6251 TCGA-43-8115-01 0 407 0 407 NA NA 0 407 #> 6252 TCGA-43-8116-01 0 358 0 358 0 358 0 358 #> 6253 TCGA-43-8118-01 1 89 NA 89 NA NA 0 89 #> 6254 TCGA-43-A474-01 0 353 0 353 0 353 0 353 #> 6255 TCGA-43-A475-01 0 296 0 296 0 296 0 296 #> 6256 TCGA-43-A56U-01 0 432 0 432 0 432 0 432 #> 6257 TCGA-43-A56V-01 0 366 0 366 1 355 1 355 #> 6258 TCGA-46-3765-01 0 405 0 405 0 405 0 405 #> 6259 TCGA-46-3766-01 0 370 0 370 0 370 0 370 #> 6260 TCGA-46-3767-01 0 396 0 396 0 396 0 396 #> 6261 TCGA-46-3768-01 1 299 0 299 0 299 0 299 #> 6262 TCGA-46-3769-01 0 135 0 135 0 135 0 135 #> 6263 TCGA-46-6025-01 0 324 0 324 0 324 0 324 #> 6264 TCGA-46-6026-01 0 423 0 423 0 423 0 423 #> 6265 TCGA-51-4079-01 1 12 NA 12 NA NA 0 12 #> 6266 TCGA-51-4079-11 1 12 NA 12 NA NA 0 12 #> 6267 TCGA-51-4080-01 1 12 0 12 NA NA 0 12 #> 6268 TCGA-51-4080-11 1 12 0 12 NA NA 0 12 #> 6269 TCGA-51-4081-01 0 911 0 911 NA NA 0 911 #> 6270 TCGA-51-4081-11 0 911 0 911 NA NA 0 911 #> 6271 TCGA-51-6867-01 1 1856 1 1856 1 788 1 788 #> 6272 TCGA-52-7622-01 0 862 0 862 0 862 0 862 #> 6273 TCGA-52-7809-01 1 166 1 166 NA NA 1 166 #> 6274 TCGA-52-7810-01 0 923 0 923 0 923 0 923 #> 6275 TCGA-52-7811-01 1 266 1 266 NA NA 1 153 #> 6276 TCGA-52-7812-01 1 835 1 835 NA NA 1 791 #> 6277 TCGA-56-1622-01 1 881 1 881 NA NA 1 881 #> 6278 TCGA-56-5897-01 0 378 0 378 0 378 0 378 #> 6279 TCGA-56-5898-01 0 555 0 555 0 555 0 555 #> 6280 TCGA-56-6545-01 0 666 0 666 0 666 0 666 #> 6281 TCGA-56-6546-01 0 NA 0 NA NA NA 0 NA #> 6282 TCGA-56-7221-01 0 608 0 608 0 608 0 608 #> 6283 TCGA-56-7222-01 1 562 1 562 1 427 1 427 #> 6284 TCGA-56-7222-11 1 562 1 562 1 427 1 427 #> 6285 TCGA-56-7223-01 1 442 1 442 NA NA 1 132 #> 6286 TCGA-56-7579-01 1 951 1 951 NA NA 1 149 #> 6287 TCGA-56-7580-01 0 925 0 925 0 925 0 925 #> 6288 TCGA-56-7580-11 0 925 0 925 0 925 0 925 #> 6289 TCGA-56-7582-01 0 601 0 601 0 601 0 601 #> 6290 TCGA-56-7582-11 0 601 0 601 0 601 0 601 #> 6291 TCGA-56-7730-01 1 198 1 198 NA NA 1 198 #> 6292 TCGA-56-7730-11 1 198 1 198 NA NA 1 198 #> 6293 TCGA-56-7731-01 1 3 0 3 NA NA 0 3 #> 6294 TCGA-56-7731-11 1 3 0 3 NA NA 0 3 #> 6295 TCGA-56-7822-01 1 532 1 532 NA NA 1 301 #> 6296 TCGA-56-7823-01 0 1011 0 1011 0 1011 0 1011 #> 6297 TCGA-56-7823-11 0 1011 0 1011 0 1011 0 1011 #> 6298 TCGA-56-8082-01 0 455 0 455 0 455 0 455 #> 6299 TCGA-56-8082-11 0 455 0 455 0 455 0 455 #> 6300 TCGA-56-8083-01 0 150 0 150 NA NA 0 150 #> 6301 TCGA-56-8083-11 0 150 0 150 NA NA 0 150 #> 6302 TCGA-56-8201-01 1 397 1 397 NA NA 1 397 #> 6303 TCGA-56-8201-11 1 397 1 397 NA NA 1 397 #> 6304 TCGA-56-8304-01 0 106 0 106 0 106 0 106 #> 6305 TCGA-56-8305-01 0 105 0 105 0 105 0 105 #> 6306 TCGA-56-8307-01 0 818 0 818 0 818 0 818 #> 6307 TCGA-56-8308-01 0 517 0 517 NA NA 0 517 #> 6308 TCGA-56-8309-01 0 428 0 428 0 428 0 428 #> 6309 TCGA-56-8309-11 0 428 0 428 0 428 0 428 #> 6310 TCGA-56-8503-01 0 41 0 41 NA NA 0 41 #> 6311 TCGA-56-8504-01 0 510 0 510 0 510 0 510 #> 6312 TCGA-56-8622-01 0 55 0 55 NA NA 0 55 #> 6313 TCGA-56-8623-01 1 692 0 692 0 692 1 645 #> 6314 TCGA-56-8623-11 1 692 0 692 0 692 1 645 #> 6315 TCGA-56-8624-01 0 420 0 420 0 420 0 420 #> 6316 TCGA-56-8625-01 1 315 1 315 NA NA 1 272 #> 6317 TCGA-56-8626-01 1 302 0 302 0 302 0 302 #> 6318 TCGA-56-8628-01 0 616 0 616 0 616 0 616 #> 6319 TCGA-56-8629-01 0 481 0 481 0 481 0 481 #> 6320 TCGA-56-A49D-01 0 637 0 637 0 637 0 637 #> 6321 TCGA-56-A4BW-01 0 585 0 585 0 585 0 585 #> 6322 TCGA-56-A4BX-01 0 405 0 405 0 405 0 405 #> 6323 TCGA-56-A4BY-01 1 543 1 543 NA NA 1 543 #> 6324 TCGA-56-A4ZJ-01 0 640 0 640 0 640 0 640 #> 6325 TCGA-56-A4ZK-01 0 570 0 570 0 570 0 570 #> 6326 TCGA-56-A5DR-01 0 4 0 4 0 4 0 4 #> 6327 TCGA-56-A5DS-01 0 8 0 8 0 8 0 8 #> 6328 TCGA-56-A62T-01 0 440 0 440 0 440 0 440 #> 6329 TCGA-58-8386-01 1 1 0 1 NA NA 0 1 #> 6330 TCGA-58-8386-11 1 1 0 1 NA NA 0 1 #> 6331 TCGA-58-8387-01 1 403 0 403 0 403 0 403 #> 6332 TCGA-58-8388-01 1 412 0 412 0 412 0 412 #> 6333 TCGA-58-8390-01 0 911 0 911 0 911 0 911 #> 6334 TCGA-58-8391-01 0 2167 0 2167 1 2033 1 2033 #> 6335 TCGA-58-8392-01 1 501 1 501 1 96 1 96 #> 6336 TCGA-58-8393-01 0 1058 0 1058 0 1058 0 1058 #> 6337 TCGA-58-A46J-01 0 2589 0 2589 0 2589 0 2589 #> 6338 TCGA-58-A46K-01 1 1045 1 1045 1 735 1 735 #> 6339 TCGA-58-A46L-01 0 1723 0 1723 0 1723 0 1723 #> 6340 TCGA-58-A46M-01 0 1072 0 1072 0 1072 0 1072 #> 6341 TCGA-58-A46N-01 0 910 0 910 1 630 1 630 #> 6342 TCGA-60-2695-01 0 642 0 642 0 642 0 642 #> 6343 TCGA-60-2696-01 1 109 NA 109 NA NA 0 109 #> 6344 TCGA-60-2697-01 1 372 1 372 1 200 1 200 #> 6345 TCGA-60-2698-01 1 311 1 311 NA NA 1 114 #> 6346 TCGA-60-2703-01 1 2945 NA 2945 1 1757 1 1757 #> 6347 TCGA-60-2704-01 1 1154 1 1154 NA NA 1 532 #> 6348 TCGA-60-2706-01 0 2820 0 2820 0 2820 0 2820 #> 6349 TCGA-60-2707-01 1 667 1 667 1 579 1 579 #> 6350 TCGA-60-2708-01 0 2447 0 2447 0 2447 0 2447 #> 6351 TCGA-60-2709-01 0 1505 0 1505 0 1505 0 1505 #> 6352 TCGA-60-2709-11 0 1505 0 1505 0 1505 0 1505 #> 6353 TCGA-60-2710-01 0 2024 0 2024 0 2024 0 2024 #> 6354 TCGA-60-2711-01 0 1260 0 1260 0 1260 0 1260 #> 6355 TCGA-60-2712-01 1 274 NA 274 0 274 0 274 #> 6356 TCGA-60-2713-01 0 1731 0 1731 1 1356 1 1356 #> 6357 TCGA-60-2714-01 0 1531 0 1531 0 1531 0 1531 #> 6358 TCGA-60-2715-01 1 1075 1 1075 NA NA 1 1075 #> 6359 TCGA-60-2716-01 0 1475 0 1475 0 1475 0 1475 #> 6360 TCGA-60-2719-01 0 1297 0 1297 0 1297 0 1297 #> 6361 TCGA-60-2720-01 0 97 0 97 NA NA 0 97 #> 6362 TCGA-60-2721-01 0 983 0 983 0 983 0 983 #> 6363 TCGA-60-2722-01 0 908 0 908 1 851 1 851 #> 6364 TCGA-60-2723-01 0 1092 0 1092 0 1092 0 1092 #> 6365 TCGA-60-2724-01 0 717 0 717 NA NA 0 717 #> 6366 TCGA-60-2725-01 0 816 0 816 0 816 0 816 #> 6367 TCGA-60-2726-01 1 358 0 358 0 358 0 358 #> 6368 TCGA-63-5128-01 1 NA 1 NA NA NA 1 NA #> 6369 TCGA-63-5131-01 1 NA 0 NA 0 NA 0 NA #> 6370 TCGA-63-6202-01 0 1602 0 1602 0 1602 0 1602 #> 6371 TCGA-63-7020-01 0 2133 0 2133 0 2133 0 2133 #> 6372 TCGA-63-7021-01 0 2142 0 2142 0 2142 1 1503 #> 6373 TCGA-63-7022-01 0 2073 0 2073 0 2073 0 2073 #> 6374 TCGA-63-7023-01 0 1682 0 1682 0 1682 0 1682 #> 6375 TCGA-63-A5M9-01 0 0 0 0 NA NA 0 0 #> 6376 TCGA-63-A5MB-01 0 3123 0 3123 0 3123 0 3123 #> 6377 TCGA-63-A5MG-01 0 2148 0 2148 0 2148 0 2148 #> 6378 TCGA-63-A5MH-01 0 2026 0 2026 0 2026 0 2026 #> 6379 TCGA-63-A5MI-01 0 1784 0 1784 0 1784 0 1784 #> 6380 TCGA-63-A5MJ-01 0 1824 0 1824 0 1824 0 1824 #> 6381 TCGA-63-A5ML-01 0 1386 0 1386 0 1386 0 1386 #> 6382 TCGA-63-A5MM-01 1 456 1 456 1 218 1 218 #> 6383 TCGA-63-A5MN-01 1 345 1 345 1 320 1 320 #> 6384 TCGA-63-A5MP-01 0 769 0 769 1 511 1 511 #> 6385 TCGA-63-A5MR-01 0 2716 0 2716 0 2716 0 2716 #> 6386 TCGA-63-A5MS-01 0 2381 0 2381 0 2381 0 2381 #> 6387 TCGA-63-A5MT-01 0 498 0 498 1 427 1 427 #> 6388 TCGA-63-A5MU-01 1 NA 1 NA 1 420 1 420 #> 6389 TCGA-63-A5MV-01 0 1100 0 1100 0 1100 0 1100 #> 6390 TCGA-63-A5MW-01 0 1639 0 1639 0 1639 0 1639 #> 6391 TCGA-63-A5MY-01 0 1052 0 1052 0 1052 0 1052 #> 6392 TCGA-66-2727-01 1 516 NA 516 NA NA 0 516 #> 6393 TCGA-66-2734-01 0 1311 0 1311 NA NA 0 1311 #> 6394 TCGA-66-2737-01 0 61 0 61 NA NA 0 61 #> 6395 TCGA-66-2742-01 0 641 0 641 NA NA 0 641 #> 6396 TCGA-66-2744-01 0 30 0 30 NA NA 0 30 #> 6397 TCGA-66-2753-01 0 31 0 31 NA NA 0 31 #> 6398 TCGA-66-2754-01 0 61 0 61 NA NA 0 61 #> 6399 TCGA-66-2755-01 0 28 0 28 NA NA 0 28 #> 6400 TCGA-66-2756-01 0 30 0 30 NA NA 0 30 #> 6401 TCGA-66-2757-01 1 1338 1 1338 NA NA 1 912 #> 6402 TCGA-66-2758-01 0 639 0 639 0 639 0 639 #> 6403 TCGA-66-2759-01 0 762 0 762 0 762 0 762 #> 6404 TCGA-66-2763-01 0 30 0 30 NA NA 0 30 #> 6405 TCGA-66-2765-01 0 61 0 61 NA NA 0 61 #> 6406 TCGA-66-2766-01 0 31 0 31 NA NA 0 31 #> 6407 TCGA-66-2767-01 0 61 0 61 NA NA 0 61 #> 6408 TCGA-66-2768-01 0 61 0 61 NA NA 0 61 #> 6409 TCGA-66-2769-01 1 215 NA 215 NA NA 0 215 #> 6410 TCGA-66-2770-01 0 700 0 700 NA NA 0 700 #> 6411 TCGA-66-2771-01 0 578 0 578 0 578 0 578 #> 6412 TCGA-66-2773-01 1 92 0 92 NA NA 0 92 #> 6413 TCGA-66-2777-01 0 61 0 61 NA NA 0 61 #> 6414 TCGA-66-2778-01 0 578 0 578 0 578 0 578 #> 6415 TCGA-66-2780-01 1 366 NA 366 NA NA 0 366 #> 6416 TCGA-66-2781-01 0 121 0 121 NA NA 0 121 #> 6417 TCGA-66-2782-01 1 365 1 365 NA NA 1 304 #> 6418 TCGA-66-2783-01 0 759 0 759 0 759 0 759 #> 6419 TCGA-66-2785-01 0 60 0 60 NA NA 0 60 #> 6420 TCGA-66-2786-01 0 790 0 790 NA NA 0 790 #> 6421 TCGA-66-2787-01 0 1217 0 1217 NA NA 0 1217 #> 6422 TCGA-66-2788-01 0 699 0 699 NA NA 0 699 #> 6423 TCGA-66-2789-01 1 123 0 123 NA NA 0 123 #> 6424 TCGA-66-2790-01 0 699 0 699 NA NA 1 699 #> 6425 TCGA-66-2791-01 1 153 NA 153 NA NA 0 153 #> 6426 TCGA-66-2792-01 0 913 0 913 0 913 0 913 #> 6427 TCGA-66-2793-01 1 306 0 306 NA NA 0 306 #> 6428 TCGA-66-2794-01 0 1645 0 1645 0 1645 0 1645 #> 6429 TCGA-66-2795-01 0 122 0 122 NA NA 0 122 #> 6430 TCGA-66-2800-01 0 1492 0 1492 NA NA 0 1492 #> 6431 TCGA-68-7755-01 0 83 0 83 NA NA 0 83 #> 6432 TCGA-68-7756-01 0 202 0 202 NA NA 0 202 #> 6433 TCGA-68-7757-01 0 211 0 211 NA NA 0 211 #> 6434 TCGA-68-8250-01 0 244 0 244 NA NA 0 244 #> 6435 TCGA-68-8251-01 0 406 0 406 NA NA 0 406 #> 6436 TCGA-68-A59I-01 0 492 0 492 NA NA 1 159 #> 6437 TCGA-68-A59J-01 0 448 0 448 0 448 0 448 #> 6438 TCGA-6A-AB49-01 1 NA 0 NA NA NA 0 NA #> 6439 TCGA-70-6722-01 0 367 0 367 NA NA 1 293 #> 6440 TCGA-70-6723-01 0 375 0 375 NA NA 1 312 #> 6441 TCGA-77-6842-01 1 899 NA 899 NA NA 1 201 #> 6442 TCGA-77-6843-01 1 2224 NA 2224 NA NA 0 2224 #> 6443 TCGA-77-6844-01 1 2284 NA 2284 1 1788 1 1788 #> 6444 TCGA-77-6845-01 1 708 NA 708 NA NA 0 708 #> 6445 TCGA-77-7138-01 1 340 NA 340 NA NA 0 340 #> 6446 TCGA-77-7138-11 1 340 NA 340 NA NA 0 340 #> 6447 TCGA-77-7139-01 0 4261 0 4261 0 4261 0 4261 #> 6448 TCGA-77-7140-01 1 632 NA 632 NA NA 1 250 #> 6449 TCGA-77-7141-01 0 15 0 15 NA NA 0 15 #> 6450 TCGA-77-7142-01 0 2227 0 2227 NA NA 0 2227 #> 6451 TCGA-77-7142-11 0 2227 0 2227 NA NA 0 2227 #> 6452 TCGA-77-7335-01 1 2133 NA 2133 NA NA 0 2133 #> 6453 TCGA-77-7335-11 1 2133 NA 2133 NA NA 0 2133 #> 6454 TCGA-77-7337-01 1 3253 NA 3253 NA NA 0 3253 #> 6455 TCGA-77-7337-11 1 3253 NA 3253 NA NA 0 3253 #> 6456 TCGA-77-7338-01 1 5 NA 5 NA NA 0 5 #> 6457 TCGA-77-7338-11 1 5 NA 5 NA NA 0 5 #> 6458 TCGA-77-7463-01 1 1423 NA 1423 NA NA 0 1423 #> 6459 TCGA-77-7465-01 0 990 0 990 0 990 0 990 #> 6460 TCGA-77-8007-01 1 198 NA 198 NA NA 1 139 #> 6461 TCGA-77-8007-11 1 198 NA 198 NA NA 1 139 #> 6462 TCGA-77-8008-01 1 2639 NA 2639 NA NA 0 2639 #> 6463 TCGA-77-8008-11 1 2639 NA 2639 NA NA 0 2639 #> 6464 TCGA-77-8009-01 1 1695 NA 1695 1 607 1 607 #> 6465 TCGA-77-8128-01 1 1150 NA 1150 NA NA 0 1150 #> 6466 TCGA-77-8130-01 0 4765 0 4765 0 4765 1 4471 #> 6467 TCGA-77-8131-01 1 383 NA 383 NA NA 0 383 #> 6468 TCGA-77-8133-01 1 1640 NA 1640 NA NA 0 1640 #> 6469 TCGA-77-8136-01 1 1189 NA 1189 NA NA 1 301 #> 6470 TCGA-77-8138-01 1 539 1 539 NA NA 1 289 #> 6471 TCGA-77-8139-01 0 3166 0 3166 0 3166 0 3166 #> 6472 TCGA-77-8140-01 1 351 NA 351 NA NA 0 351 #> 6473 TCGA-77-8143-01 1 803 1 803 NA NA 1 803 #> 6474 TCGA-77-8144-01 0 833 0 833 0 833 0 833 #> 6475 TCGA-77-8145-01 1 212 NA 212 NA NA 1 136 #> 6476 TCGA-77-8146-01 0 3189 0 3189 0 3189 0 3189 #> 6477 TCGA-77-8148-01 0 2023 0 2023 0 2023 0 2023 #> 6478 TCGA-77-8150-01 1 1655 1 1655 NA NA 1 1278 #> 6479 TCGA-77-8153-01 0 1992 0 1992 0 1992 0 1992 #> 6480 TCGA-77-8154-01 0 1841 0 1841 0 1841 0 1841 #> 6481 TCGA-77-8156-01 0 1106 0 1106 0 1106 0 1106 #> 6482 TCGA-77-A5FZ-01 1 3838 NA 3838 0 3838 0 3838 #> 6483 TCGA-77-A5G1-01 0 4026 0 4026 0 4026 1 2197 #> 6484 TCGA-77-A5G3-01 0 4570 0 4570 0 4570 0 4570 #> 6485 TCGA-77-A5G6-01 1 678 1 678 1 392 1 392 #> 6486 TCGA-77-A5G7-01 1 180 NA 180 0 180 0 180 #> 6487 TCGA-77-A5G8-01 0 1884 0 1884 NA NA 0 1884 #> 6488 TCGA-77-A5GA-01 0 1280 0 1280 0 1280 0 1280 #> 6489 TCGA-77-A5GB-01 1 937 NA 937 0 937 1 229 #> 6490 TCGA-77-A5GF-01 1 840 1 840 1 722 1 722 #> 6491 TCGA-77-A5GH-01 0 1182 0 1182 0 1182 0 1182 #> 6492 TCGA-79-5596-01 0 NA 0 NA NA NA 0 NA #> 6493 TCGA-85-6175-01 1 294 1 294 NA NA 1 294 #> 6494 TCGA-85-6560-01 0 1259 0 1259 0 1259 0 1259 #> 6495 TCGA-85-6561-01 0 1224 0 1224 0 1224 0 1224 #> 6496 TCGA-85-6798-01 1 195 1 195 1 180 1 180 #> 6497 TCGA-85-7696-01 0 1111 0 1111 0 1111 0 1111 #> 6498 TCGA-85-7697-01 0 1063 0 1063 0 1063 0 1063 #> 6499 TCGA-85-7698-01 0 952 0 952 1 650 1 650 #> 6500 TCGA-85-7699-01 1 1001 1 1001 1 760 1 760 #> 6501 TCGA-85-7710-01 0 42 0 42 0 42 0 42 #> 6502 TCGA-85-7710-11 0 42 0 42 0 42 0 42 #> 6503 TCGA-85-7843-01 0 35 0 35 NA NA 0 35 #> 6504 TCGA-85-7844-01 0 911 0 911 0 911 0 911 #> 6505 TCGA-85-7950-01 0 576 0 576 0 576 0 576 #> 6506 TCGA-85-8048-01 0 765 0 765 0 765 0 765 #> 6507 TCGA-85-8049-01 0 579 0 579 0 579 0 579 #> 6508 TCGA-85-8052-01 0 734 0 734 0 734 0 734 #> 6509 TCGA-85-8070-01 0 960 0 960 0 960 0 960 #> 6510 TCGA-85-8071-01 0 815 0 815 0 815 0 815 #> 6511 TCGA-85-8072-01 0 932 0 932 0 932 0 932 #> 6512 TCGA-85-8276-01 0 1050 0 1050 1 1048 1 1048 #> 6513 TCGA-85-8277-01 1 307 0 307 0 307 0 307 #> 6514 TCGA-85-8287-01 1 23 0 23 0 23 0 23 #> 6515 TCGA-85-8288-01 1 402 0 402 0 402 0 402 #> 6516 TCGA-85-8350-01 0 683 0 683 0 683 0 683 #> 6517 TCGA-85-8351-01 0 510 0 510 0 510 0 510 #> 6518 TCGA-85-8352-01 1 161 1 161 1 128 1 128 #> 6519 TCGA-85-8353-01 1 94 1 94 NA NA 1 94 #> 6520 TCGA-85-8354-01 0 995 0 995 0 995 0 995 #> 6521 TCGA-85-8355-01 0 61 0 61 0 61 0 61 #> 6522 TCGA-85-8479-01 0 468 0 468 0 468 0 468 #> 6523 TCGA-85-8481-01 1 236 0 236 NA NA 0 236 #> 6524 TCGA-85-8580-01 0 1113 0 1113 0 1113 0 1113 #> 6525 TCGA-85-8582-01 0 1160 0 1160 0 1160 0 1160 #> 6526 TCGA-85-8584-01 1 383 0 383 0 383 0 383 #> 6527 TCGA-85-8664-01 1 550 1 550 1 434 1 434 #> 6528 TCGA-85-8666-01 1 687 0 687 0 687 0 687 #> 6529 TCGA-85-A4CL-01 1 921 0 921 0 921 0 921 #> 6530 TCGA-85-A4CN-01 0 1038 0 1038 0 1038 0 1038 #> 6531 TCGA-85-A4JB-01 0 942 0 942 0 942 0 942 #> 6532 TCGA-85-A4JC-01 1 604 1 604 1 548 1 548 #> 6533 TCGA-85-A4PA-01 0 741 0 741 0 741 0 741 #> 6534 TCGA-85-A4QQ-01 1 927 0 927 0 927 0 927 #> 6535 TCGA-85-A4QR-01 0 600 0 600 0 600 0 600 #> 6536 TCGA-85-A50M-01 1 826 0 826 0 826 0 826 #> 6537 TCGA-85-A50Z-01 0 493 0 493 0 493 1 462 #> 6538 TCGA-85-A510-01 0 482 0 482 1 363 1 363 #> 6539 TCGA-85-A511-01 1 455 1 455 1 390 1 390 #> 6540 TCGA-85-A512-01 0 465 0 465 0 465 0 465 #> 6541 TCGA-85-A513-01 0 910 0 910 0 910 0 910 #> 6542 TCGA-85-A53L-01 0 377 0 377 0 377 0 377 #> 6543 TCGA-85-A5B5-01 0 111 0 111 0 111 0 111 #> 6544 TCGA-90-6837-01 0 758 0 758 0 758 0 758 #> 6545 TCGA-90-6837-11 0 758 0 758 0 758 0 758 #> 6546 TCGA-90-7766-01 0 289 0 289 NA NA 1 289 #> 6547 TCGA-90-7767-01 0 89 0 89 NA NA 0 89 #> 6548 TCGA-90-7767-11 0 89 0 89 NA NA 0 89 #> 6549 TCGA-90-7769-01 0 358 0 358 0 358 0 358 #> 6550 TCGA-90-7964-01 0 428 0 428 0 428 0 428 #> 6551 TCGA-90-A4ED-01 0 615 0 615 0 615 0 615 #> 6552 TCGA-90-A4EE-01 0 688 0 688 0 688 0 688 #> 6553 TCGA-90-A59Q-01 1 322 1 322 1 274 1 274 #> 6554 TCGA-92-7340-01 0 82 0 82 NA NA 0 82 #> 6555 TCGA-92-7340-11 0 82 0 82 NA NA 0 82 #> 6556 TCGA-92-7341-01 0 106 0 106 NA NA 0 106 #> 6557 TCGA-92-8063-01 0 122 0 122 0 122 0 122 #> 6558 TCGA-92-8064-01 0 160 0 160 0 160 0 160 #> 6559 TCGA-92-8065-01 0 70 0 70 0 70 0 70 #> 6560 TCGA-94-7033-01 0 640 0 640 0 640 0 640 #> 6561 TCGA-94-7557-01 1 5 0 5 0 5 0 5 #> 6562 TCGA-94-7943-01 0 559 0 559 1 556 1 556 #> 6563 TCGA-94-8035-01 0 122 0 122 0 122 0 122 #> 6564 TCGA-94-8490-01 0 153 0 153 NA NA 0 153 #> 6565 TCGA-94-8491-01 0 810 0 810 NA NA 1 641 #> 6566 TCGA-94-A4VJ-01 0 430 0 430 0 430 0 430 #> 6567 TCGA-94-A5I4-01 0 491 0 491 1 314 1 314 #> 6568 TCGA-94-A5I6-01 0 538 0 538 NA NA 1 481 #> 6569 TCGA-96-7544-01 1 2160 0 2160 0 2160 0 2160 #> 6570 TCGA-96-7545-01 1 1736 NA 1736 NA NA 1 1693 #> 6571 TCGA-96-8169-01 0 557 0 557 0 557 0 557 #> 6572 TCGA-96-8170-01 0 531 0 531 0 531 0 531 #> 6573 TCGA-96-A4JK-01 0 589 0 589 0 589 0 589 #> 6574 TCGA-96-A4JL-01 0 842 0 842 0 842 0 842 #> 6575 TCGA-98-7454-01 0 652 0 652 0 652 0 652 #> 6576 TCGA-98-8020-01 1 84 1 84 NA NA 1 11 #> 6577 TCGA-98-8022-01 1 933 0 933 0 933 0 933 #> 6578 TCGA-98-8023-01 0 649 0 649 0 649 0 649 #> 6579 TCGA-98-A538-01 0 826 0 826 0 826 0 826 #> 6580 TCGA-98-A539-01 0 173 0 173 NA NA 1 173 #> 6581 TCGA-98-A53A-01 1 552 NA 552 0 552 0 552 #> 6582 TCGA-98-A53B-01 1 61 0 61 0 61 0 61 #> 6583 TCGA-98-A53C-01 0 822 0 822 0 822 0 822 #> 6584 TCGA-98-A53D-01 1 645 1 645 1 413 1 413 #> 6585 TCGA-98-A53H-01 0 618 0 618 0 618 1 427 #> 6586 TCGA-98-A53I-01 0 565 0 565 0 565 0 565 #> 6587 TCGA-98-A53J-01 0 630 0 630 0 630 0 630 #> 6588 TCGA-J1-A4AH-01 0 581 0 581 0 581 0 581 #> 6589 TCGA-L3-A4E7-01 0 392 0 392 0 392 0 392 #> 6590 TCGA-L3-A524-01 1 490 0 490 0 490 0 490 #> 6591 TCGA-LA-A446-01 0 401 0 401 0 401 0 401 #> 6592 TCGA-LA-A7SW-01 1 408 1 408 NA NA 1 235 #> 6593 TCGA-MF-A522-01 1 360 1 360 NA NA 1 173 #> 6594 TCGA-NC-A5HD-01 1 2 0 2 NA NA 0 2 #> 6595 TCGA-NC-A5HE-01 0 2336 0 2336 0 2336 0 2336 #> 6596 TCGA-NC-A5HF-01 1 138 1 138 NA NA 1 132 #> 6597 TCGA-NC-A5HG-01 0 1963 0 1963 0 1963 0 1963 #> 6598 TCGA-NC-A5HH-01 0 37 0 37 0 37 0 37 #> 6599 TCGA-NC-A5HI-01 0 1743 0 1743 0 1743 1 70 #> 6600 TCGA-NC-A5HJ-01 1 418 1 418 0 418 1 328 #> 6601 TCGA-NC-A5HK-01 0 128 0 128 0 128 0 128 #> 6602 TCGA-NC-A5HL-01 1 88 0 88 NA NA 0 88 #> 6603 TCGA-NC-A5HM-01 0 1212 0 1212 0 1212 0 1212 #> 6604 TCGA-NC-A5HN-01 0 1499 0 1499 0 1499 0 1499 #> 6605 TCGA-NC-A5HO-01 0 1336 0 1336 0 1336 0 1336 #> 6606 TCGA-NC-A5HP-01 1 770 1 770 NA NA 1 317 #> 6607 TCGA-NC-A5HQ-01 1 448 NA 448 0 448 0 448 #> 6608 TCGA-NC-A5HR-01 0 1244 0 1244 0 1244 0 1244 #> 6609 TCGA-NC-A5HT-01 0 804 0 804 1 203 1 203 #> 6610 TCGA-NK-A5CR-01 0 2542 0 2542 NA NA 0 2542 #> 6611 TCGA-NK-A5CT-01 0 1997 0 1997 NA NA 1 1990 #> 6612 TCGA-NK-A5CX-01 0 111 0 111 NA NA 0 111 #> 6613 TCGA-NK-A5D1-01 0 511 0 511 NA NA 1 151 #> 6614 TCGA-NK-A7XE-01 0 13 0 13 NA NA 0 13 #> 6615 TCGA-O2-A52N-01 1 1006 0 1006 NA NA 0 1006 #> 6616 TCGA-O2-A52Q-01 1 113 1 113 NA NA 1 87 #> 6617 TCGA-O2-A52S-01 1 387 1 387 NA NA 1 246 #> 6618 TCGA-O2-A52V-01 1 1335 0 1335 NA NA 1 690 #> 6619 TCGA-O2-A52W-01 1 261 0 261 NA NA 0 261 #> 6620 TCGA-O2-A5IB-01 1 340 1 340 NA NA 1 253 #> 6621 TCGA-XC-AA0X-01 1 6 0 6 NA NA 0 6 #> 6622 TCGA-3H-AB3K-01 1 1715 1 1715 NA NA 1 841 #> 6623 TCGA-3H-AB3L-01 1 361 1 361 NA NA 1 222 #> 6624 TCGA-3H-AB3M-01 1 885 1 885 NA NA 1 107 #> 6625 TCGA-3H-AB3O-01 1 1302 1 1302 NA NA 1 627 #> 6626 TCGA-3H-AB3S-01 1 385 1 385 NA NA 1 186 #> 6627 TCGA-3H-AB3T-01 1 414 1 414 NA NA 1 312 #> 6628 TCGA-3H-AB3U-01 1 826 1 826 NA NA 1 108 #> 6629 TCGA-3H-AB3X-01 0 1490 0 1490 NA NA 0 1490 #> 6630 TCGA-3U-A98D-01 1 142 NA 142 NA NA 1 125 #> 6631 TCGA-3U-A98E-01 0 1916 0 1916 NA NA 1 1257 #> 6632 TCGA-3U-A98F-01 1 536 1 536 NA NA 1 365 #> 6633 TCGA-3U-A98G-01 1 630 1 630 NA NA 1 497 #> 6634 TCGA-3U-A98H-01 1 1156 1 1156 NA NA 1 798 #> 6635 TCGA-3U-A98I-01 1 860 1 860 NA NA 1 404 #> 6636 TCGA-3U-A98J-01 1 741 1 741 NA NA 1 741 #> 6637 TCGA-LK-A4NW-01 1 546 1 546 NA NA 1 546 #> 6638 TCGA-LK-A4NY-01 1 168 0 168 0 168 0 168 #> 6639 TCGA-LK-A4NZ-01 1 244 1 244 NA NA 1 244 #> 6640 TCGA-LK-A4O0-01 1 185 0 185 0 185 0 185 #> 6641 TCGA-LK-A4O2-01 1 57 1 57 NA NA 1 57 #> 6642 TCGA-LK-A4O4-01 1 949 0 949 0 949 0 949 #> 6643 TCGA-LK-A4O5-01 1 387 1 387 NA NA 1 387 #> 6644 TCGA-LK-A4O6-01 1 448 1 448 NA NA 1 448 #> 6645 TCGA-LK-A4O7-01 1 350 1 350 NA NA 1 350 #> 6646 TCGA-MQ-A4KX-01 1 2459 NA 2459 1 471 1 471 #> 6647 TCGA-MQ-A4LC-01 1 2790 0 2790 1 1908 1 1908 #> 6648 TCGA-MQ-A4LI-01 1 572 1 572 NA NA 1 416 #> 6649 TCGA-MQ-A4LJ-01 1 709 NA 709 NA NA 1 409 #> 6650 TCGA-MQ-A4LM-01 1 158 NA 158 NA NA 1 113 #> 6651 TCGA-MQ-A4LP-01 1 527 NA 527 NA NA 0 527 #> 6652 TCGA-MQ-A4LV-01 1 107 0 107 1 99 1 99 #> 6653 TCGA-MQ-A6BL-01 1 333 NA 333 NA NA 1 186 #> 6654 TCGA-MQ-A6BN-01 1 757 0 757 1 485 1 485 #> 6655 TCGA-MQ-A6BQ-01 0 2359 0 2359 NA NA 0 2359 #> 6656 TCGA-MQ-A6BR-01 0 2090 0 2090 NA NA 1 665 #> 6657 TCGA-MQ-A6BS-01 1 608 0 608 0 608 0 608 #> 6658 TCGA-NQ-A57I-01 1 20 1 20 NA NA 1 20 #> 6659 TCGA-NQ-A638-01 0 0 0 0 0 0 0 0 #> 6660 TCGA-SC-A6LM-01 1 881 1 881 NA NA 1 363 #> 6661 TCGA-SC-A6LN-01 1 414 0 414 0 414 0 414 #> 6662 TCGA-SC-A6LP-01 1 78 1 78 NA NA 1 78 #> 6663 TCGA-SC-A6LQ-01 1 297 1 297 1 238 1 238 #> 6664 TCGA-SC-A6LR-01 0 1168 0 1168 NA NA 0 1168 #> 6665 TCGA-SC-AA5Z-01 0 664 0 664 NA NA 0 664 #> 6666 TCGA-SH-A7BC-01 1 727 1 727 NA NA 1 507 #> 6667 TCGA-SH-A7BD-01 1 459 1 459 NA NA 1 200 #> 6668 TCGA-SH-A7BH-01 1 243 1 243 NA NA 1 125 #> 6669 TCGA-SH-A9CT-01 1 449 1 449 NA NA 1 449 #> 6670 TCGA-SH-A9CU-01 1 732 1 732 NA NA 1 732 #> 6671 TCGA-TS-A7OU-01 1 1675 NA 1675 NA NA 0 1675 #> 6672 TCGA-TS-A7OY-01 1 255 NA 255 NA NA 0 255 #> 6673 TCGA-TS-A7OZ-01 1 844 NA 844 NA NA 0 844 #> 6674 TCGA-TS-A7P0-01 1 1261 NA 1261 NA NA 1 277 #> 6675 TCGA-TS-A7P1-01 1 563 NA 563 NA NA 1 494 #> 6676 TCGA-TS-A7P3-01 1 689 NA 689 NA NA 0 689 #> 6677 TCGA-TS-A7P6-01 1 283 NA 283 NA NA 0 283 #> 6678 TCGA-TS-A7P7-01 1 591 NA 591 NA NA 0 591 #> 6679 TCGA-TS-A7P8-01 1 457 NA 457 NA NA 1 301 #> 6680 TCGA-TS-A7PB-01 1 982 NA 982 NA NA 0 982 #> 6681 TCGA-TS-A8AF-01 1 358 NA 358 NA NA 1 325 #> 6682 TCGA-TS-A8AI-01 1 328 NA 328 NA NA 0 328 #> 6683 TCGA-TS-A8AS-01 1 795 NA 795 NA NA 0 795 #> 6684 TCGA-TS-A8AV-01 1 NA NA NA NA NA 0 NA #> 6685 TCGA-TS-A8AY-01 1 469 NA 469 NA NA 0 469 #> 6686 TCGA-UD-AABY-01 1 843 1 843 NA NA 1 47 #> 6687 TCGA-UD-AABZ-01 1 197 1 197 NA NA 1 197 #> 6688 TCGA-UD-AAC1-01 1 789 1 789 NA NA 1 85 #> 6689 TCGA-UD-AAC4-01 1 719 1 719 NA NA 1 267 #> 6690 TCGA-UD-AAC5-01 1 253 1 253 NA NA 1 230 #> 6691 TCGA-UD-AAC6-01 1 456 1 456 NA NA 1 126 #> 6692 TCGA-UD-AAC7-01 1 406 1 406 NA NA 1 265 #> 6693 TCGA-UT-A88C-01 1 863 1 863 1 479 1 479 #> 6694 TCGA-UT-A88D-01 1 823 0 823 0 823 0 823 #> 6695 TCGA-UT-A88E-01 1 434 1 434 NA NA 1 121 #> 6696 TCGA-UT-A88G-01 1 76 1 76 NA NA 1 44 #> 6697 TCGA-UT-A97Y-01 1 144 1 144 NA NA 1 144 #> 6698 TCGA-XT-AASU-01 1 142 1 142 1 133 1 133 #> 6699 TCGA-YS-A95B-01 1 39 1 39 NA NA 1 39 #> 6700 TCGA-YS-A95C-01 1 133 0 133 0 133 0 133 #> 6701 TCGA-YS-AA4M-01 1 84 1 84 NA NA 1 NA #> 6702 TCGA-ZN-A9VO-01 0 261 0 261 NA NA 0 261 #> 6703 TCGA-ZN-A9VP-01 0 228 0 228 NA NA 0 228 #> 6704 TCGA-ZN-A9VQ-01 0 499 0 499 NA NA 1 313 #> 6705 TCGA-ZN-A9VS-01 0 1228 0 1228 NA NA 1 1025 #> 6706 TCGA-ZN-A9VU-01 0 977 0 977 NA NA 1 585 #> 6707 TCGA-ZN-A9VV-01 0 1309 0 1309 NA NA 1 676 #> 6708 TCGA-ZN-A9VW-01 1 84 1 84 NA NA 1 NA #> 6709 TCGA-04-1331-01 1 1336 1 1336 1 459 1 459 #> 6710 TCGA-04-1332-01 1 1247 1 1247 NA NA 1 393 #> 6711 TCGA-04-1337-01 1 61 1 61 NA NA 1 61 #> 6712 TCGA-04-1338-01 0 1418 0 1418 NA NA 1 380 #> 6713 TCGA-04-1341-01 0 33 0 33 0 33 0 33 #> 6714 TCGA-04-1343-01 1 361 1 361 NA NA 1 361 #> 6715 TCGA-04-1347-01 0 1919 0 1919 NA NA 0 1919 #> 6716 TCGA-04-1348-01 1 1483 1 1483 1 575 1 575 #> 6717 TCGA-04-1350-01 1 1946 1 1946 NA NA 1 111 #> 6718 TCGA-04-1356-01 1 1499 1 1499 NA NA 1 156 #> 6719 TCGA-04-1357-01 0 NA 0 NA NA NA 0 NA #> 6720 TCGA-04-1361-01 0 989 0 989 NA NA 1 927 #> 6721 TCGA-04-1362-01 1 1348 1 1348 NA NA 1 223 #> 6722 TCGA-04-1364-01 1 1024 1 1024 NA NA 1 288 #> 6723 TCGA-04-1365-01 0 2329 0 2329 1 1328 1 1328 #> 6724 TCGA-04-1514-01 1 1720 0 1720 1 1221 1 1221 #> 6725 TCGA-04-1517-01 1 608 1 608 1 349 1 349 #> 6726 TCGA-04-1519-01 0 24 0 24 NA NA 0 24 #> 6727 TCGA-04-1530-01 1 3622 1 3622 1 350 1 350 #> 6728 TCGA-04-1536-01 1 885 1 885 NA NA 1 498 #> 6729 TCGA-04-1542-01 1 2561 1 2561 1 1020 1 1020 #> 6730 TCGA-04-1648-01 1 871 NA 871 NA NA 1 412 #> 6731 TCGA-04-1651-01 1 1102 NA 1102 NA NA 1 990 #> 6732 TCGA-04-1655-01 1 1380 NA 1380 NA NA 1 819 #> 6733 TCGA-09-0364-01 1 887 1 887 1 395 1 395 #> 6734 TCGA-09-0366-01 1 1757 1 1757 NA NA 1 190 #> 6735 TCGA-09-0367-01 1 547 1 547 NA NA 1 547 #> 6736 TCGA-09-0369-01 1 1082 1 1082 1 274 1 274 #> 6737 TCGA-09-1659-01 1 304 1 304 NA NA 1 304 #> 6738 TCGA-09-1661-01 1 1169 1 1169 NA NA 1 1169 #> 6739 TCGA-09-1662-01 1 2717 1 2717 NA NA 1 1046 #> 6740 TCGA-09-1665-01 1 1266 1 1266 1 468 1 468 #> 6741 TCGA-09-1666-01 0 1752 0 1752 1 480 1 480 #> 6742 TCGA-09-1667-01 0 1882 0 1882 1 460 1 460 #> 6743 TCGA-09-1668-01 0 1684 0 1684 0 1684 0 1684 #> 6744 TCGA-09-1669-01 0 928 0 928 0 928 0 928 #> 6745 TCGA-09-1670-01 0 547 0 547 1 547 1 547 #> 6746 TCGA-09-1673-01 0 92 0 92 NA NA 0 92 #> 6747 TCGA-09-1674-01 0 260 0 260 0 260 0 260 #> 6748 TCGA-09-2044-01 0 186 0 186 0 186 0 186 #> 6749 TCGA-09-2045-01 1 1069 1 1069 NA NA 1 631 #> 6750 TCGA-09-2048-01 1 138 1 138 NA NA 1 138 #> 6751 TCGA-09-2051-01 0 1919 0 1919 1 583 1 583 #> 6752 TCGA-09-2053-01 0 1209 0 1209 0 1209 0 1209 #> 6753 TCGA-09-2054-01 1 637 1 637 NA NA 1 637 #> 6754 TCGA-09-2056-01 0 379 0 379 0 379 0 379 #> 6755 TCGA-10-0926-01 1 788 1 788 1 287 1 287 #> 6756 TCGA-10-0927-01 1 2490 1 2490 1 1001 1 1001 #> 6757 TCGA-10-0928-01 1 563 1 563 NA NA 1 563 #> 6758 TCGA-10-0931-01 1 1000 1 1000 1 300 1 300 #> 6759 TCGA-10-0933-01 1 446 1 446 1 356 1 356 #> 6760 TCGA-10-0934-01 1 204 1 204 NA NA 1 111 #> 6761 TCGA-10-0936-01 1 1123 1 1123 NA NA 1 1123 #> 6762 TCGA-10-0937-01 1 608 1 608 1 235 1 235 #> 6763 TCGA-10-0938-01 1 636 1 636 NA NA 1 362 #> 6764 TCGA-13-0714-01 1 189 1 189 NA NA 1 110 #> 6765 TCGA-13-0720-01 1 1355 1 1355 1 292 1 292 #> 6766 TCGA-13-0724-01 1 83 1 83 NA NA 1 83 #> 6767 TCGA-13-0725-01 1 377 1 377 1 190 1 190 #> 6768 TCGA-13-0726-01 1 949 1 949 1 392 1 392 #> 6769 TCGA-13-0727-01 1 462 1 462 1 253 1 253 #> 6770 TCGA-13-0730-01 1 542 NA 542 NA NA 0 542 #> 6771 TCGA-13-0760-01 1 351 NA 351 NA NA 0 351 #> 6772 TCGA-13-0762-01 0 3400 0 3400 1 1003 1 1003 #> 6773 TCGA-13-0765-01 1 1389 1 1389 1 668 1 668 #> 6774 TCGA-13-0766-01 1 1725 1 1725 1 628 1 628 #> 6775 TCGA-13-0768-01 1 1784 1 1784 1 398 1 398 #> 6776 TCGA-13-0795-01 1 619 1 619 1 325 1 325 #> 6777 TCGA-13-0797-01 0 2121 0 2121 1 525 1 525 #> 6778 TCGA-13-0799-01 0 2535 0 2535 1 1262 1 1262 #> 6779 TCGA-13-0800-01 0 2661 0 2661 1 1396 1 1396 #> 6780 TCGA-13-0801-01 1 1399 1 1399 1 345 1 345 #> 6781 TCGA-13-0804-01 1 1073 1 1073 1 329 1 329 #> 6782 TCGA-13-0883-01 1 2097 1 2097 1 819 1 819 #> 6783 TCGA-13-0884-01 1 3260 1 3260 1 1251 1 1251 #> 6784 TCGA-13-0885-01 0 3388 0 3388 0 3388 0 3388 #> 6785 TCGA-13-0886-01 0 4665 0 4665 0 4665 0 4665 #> 6786 TCGA-13-0887-01 1 2028 1 2028 1 514 1 514 #> 6787 TCGA-13-0888-01 1 2811 0 2811 NA NA 0 2811 #> 6788 TCGA-13-0890-01 0 4424 0 4424 0 4424 0 4424 #> 6789 TCGA-13-0891-01 1 3128 1 3128 NA NA 1 762 #> 6790 TCGA-13-0893-01 1 1319 1 1319 NA NA 1 461 #> 6791 TCGA-13-0897-01 1 2182 1 2182 1 554 1 554 #> 6792 TCGA-13-0899-01 1 2012 1 2012 1 547 1 547 #> 6793 TCGA-13-0900-01 0 4077 0 4077 0 4077 0 4077 #> 6794 TCGA-13-0901-01 0 589 0 589 1 390 1 390 #> 6795 TCGA-13-0905-01 0 3746 0 3746 1 1535 1 1535 #> 6796 TCGA-13-0906-01 0 3619 0 3619 0 3619 0 3619 #> 6797 TCGA-13-0908-01 1 1843 1 1843 NA NA 1 552 #> 6798 TCGA-13-0911-01 1 1355 1 1355 NA NA 1 279 #> 6799 TCGA-13-0913-02 0 3325 0 3325 1 871 1 871 #> 6800 TCGA-13-0916-01 0 1785 0 1785 0 1785 0 1785 #> 6801 TCGA-13-0919-01 0 2571 0 2571 0 2571 0 2571 #> 6802 TCGA-13-0920-01 1 1484 1 1484 1 297 1 297 #> 6803 TCGA-13-0923-01 0 2547 0 2547 1 1719 1 1719 #> 6804 TCGA-13-0924-01 0 2614 0 2614 NA NA 1 962 #> 6805 TCGA-13-1403-01 1 2345 1 2345 1 418 1 418 #> 6806 TCGA-13-1404-01 0 2469 0 2469 1 1581 1 1581 #> 6807 TCGA-13-1405-01 1 868 1 868 NA NA 1 228 #> 6808 TCGA-13-1407-01 0 2534 0 2534 1 1333 1 1333 #> 6809 TCGA-13-1408-01 1 1680 1 1680 NA NA 1 765 #> 6810 TCGA-13-1409-01 1 1742 1 1742 NA NA 1 690 #> 6811 TCGA-13-1410-01 0 2464 0 2464 NA NA 1 319 #> 6812 TCGA-13-1411-01 1 531 1 531 NA NA 1 238 #> 6813 TCGA-13-1477-01 1 1662 1 1662 NA NA 1 235 #> 6814 TCGA-13-1481-01 1 2648 0 2648 0 2648 0 2648 #> 6815 TCGA-13-1482-01 1 1877 1 1877 NA NA 1 602 #> 6816 TCGA-13-1483-01 1 895 1 895 NA NA 1 297 #> 6817 TCGA-13-1485-01 1 629 1 629 NA NA 1 170 #> 6818 TCGA-13-1487-01 1 681 1 681 NA NA 1 412 #> 6819 TCGA-13-1488-01 1 2154 1 2154 NA NA 1 351 #> 6820 TCGA-13-1489-02 1 2553 0 2553 1 806 1 806 #> 6821 TCGA-13-1489-01 1 2553 0 2553 1 806 1 806 #> 6822 TCGA-13-1492-01 1 3819 0 3819 0 3819 0 3819 #> 6823 TCGA-13-1495-01 1 2749 1 2749 1 977 1 977 #> 6824 TCGA-13-1496-01 1 129 NA 129 NA NA 0 129 #> 6825 TCGA-13-1497-01 0 3871 0 3871 1 813 1 813 #> 6826 TCGA-13-1498-01 1 2012 1 2012 NA NA 1 534 #> 6827 TCGA-13-1499-01 0 3500 0 3500 1 583 1 583 #> 6828 TCGA-13-1501-01 1 1314 1 1314 NA NA 1 392 #> 6829 TCGA-13-1505-01 0 1998 0 1998 1 1561 1 1561 #> 6830 TCGA-13-1506-01 1 1039 1 1039 1 666 1 666 #> 6831 TCGA-13-1507-01 1 1993 1 1993 1 324 1 324 #> 6832 TCGA-13-1509-01 0 2438 0 2438 NA NA 1 578 #> 6833 TCGA-13-1510-01 1 1359 1 1359 NA NA 1 1189 #> 6834 TCGA-13-1511-01 1 1650 1 1650 NA NA 1 459 #> 6835 TCGA-13-1512-01 0 442 0 442 NA NA 1 427 #> 6836 TCGA-13-2060-01 0 2369 0 2369 NA NA 1 1475 #> 6837 TCGA-13-A5FT-01 0 2143 0 2143 0 2143 0 2143 #> 6838 TCGA-20-0987-01 1 701 1 701 NA NA 1 442 #> 6839 TCGA-20-0991-01 0 797 0 797 0 797 0 797 #> 6840 TCGA-20-1682-01 0 837 0 837 0 837 0 837 #> 6841 TCGA-20-1683-01 0 772 0 772 NA NA 1 618 #> 6842 TCGA-20-1684-01 0 581 0 581 0 581 0 581 #> 6843 TCGA-20-1685-01 0 508 0 508 0 508 0 508 #> 6844 TCGA-20-1686-01 0 89 0 89 0 89 0 89 #> 6845 TCGA-20-1687-01 0 81 0 81 NA NA 0 81 #> 6846 TCGA-23-1021-01 1 1446 1 1446 NA NA 1 1446 #> 6847 TCGA-23-1022-01 1 1511 1 1511 1 450 1 450 #> 6848 TCGA-23-1023-01 0 1233 0 1233 1 490 1 490 #> 6849 TCGA-23-1024-01 0 468 0 468 NA NA 0 468 #> 6850 TCGA-23-1026-01 0 816 0 816 1 797 1 797 #> 6851 TCGA-23-1027-01 1 976 NA 976 NA NA 1 114 #> 6852 TCGA-23-1028-01 0 1503 0 1503 1 133 1 133 #> 6853 TCGA-23-1029-01 0 268 0 268 0 268 0 268 #> 6854 TCGA-23-1030-01 0 886 0 886 1 544 1 544 #> 6855 TCGA-23-1032-01 1 84 1 84 NA NA 1 84 #> 6856 TCGA-23-1107-01 1 9 1 9 NA NA 1 9 #> 6857 TCGA-23-1109-01 1 1562 1 1562 NA NA 1 987 #> 6858 TCGA-23-1110-01 0 1658 0 1658 1 326 1 326 #> 6859 TCGA-23-1111-01 0 98 0 98 NA NA 0 98 #> 6860 TCGA-23-1113-01 1 949 1 949 NA NA 1 949 #> 6861 TCGA-23-1114-01 1 2089 1 2089 1 634 1 634 #> 6862 TCGA-23-1116-01 1 592 1 592 1 286 1 286 #> 6863 TCGA-23-1118-01 0 2616 0 2616 0 2616 0 2616 #> 6864 TCGA-23-1119-01 0 3953 0 3953 1 3378 1 3378 #> 6865 TCGA-23-1120-01 0 130 0 130 0 130 0 130 #> 6866 TCGA-23-1122-01 1 1189 1 1189 1 447 1 447 #> 6867 TCGA-23-1123-01 1 1018 1 1018 NA NA 1 1018 #> 6868 TCGA-23-1809-01 0 16 0 16 NA NA 0 16 #> 6869 TCGA-23-2077-01 0 3525 0 3525 1 1232 1 1232 #> 6870 TCGA-23-2078-01 0 2661 0 2661 0 2661 0 2661 #> 6871 TCGA-23-2081-01 1 2342 1 2342 NA NA 1 2342 #> 6872 TCGA-23-2084-01 1 1516 1 1516 NA NA 1 619 #> 6873 TCGA-24-0966-01 0 232 0 232 NA NA 0 232 #> 6874 TCGA-24-0968-01 1 NA 1 NA NA NA 1 NA #> 6875 TCGA-24-0970-01 1 354 1 354 NA NA 1 280 #> 6876 TCGA-24-0975-01 1 663 1 663 NA NA 1 663 #> 6877 TCGA-24-0979-01 1 1264 1 1264 NA NA 1 428 #> 6878 TCGA-24-0982-01 1 679 1 679 1 153 1 153 #> 6879 TCGA-24-1103-01 1 1646 1 1646 1 678 1 678 #> 6880 TCGA-24-1104-01 1 1933 1 1933 NA NA 1 959 #> 6881 TCGA-24-1105-01 1 1442 1 1442 1 470 1 470 #> 6882 TCGA-24-1413-01 0 192 0 192 0 192 0 192 #> 6883 TCGA-24-1416-01 0 194 0 194 NA NA 0 194 #> 6884 TCGA-24-1417-01 0 238 0 238 NA NA 0 238 #> 6885 TCGA-24-1418-01 0 243 0 243 0 243 0 243 #> 6886 TCGA-24-1419-01 0 239 0 239 0 239 0 239 #> 6887 TCGA-24-1422-01 1 23 NA 23 NA NA 0 23 #> 6888 TCGA-24-1423-01 0 190 0 190 0 190 0 190 #> 6889 TCGA-24-1424-01 0 183 0 183 0 183 0 183 #> 6890 TCGA-24-1425-01 0 181 0 181 0 181 0 181 #> 6891 TCGA-24-1426-01 0 163 0 163 0 163 0 163 #> 6892 TCGA-24-1427-01 0 147 0 147 NA NA 0 147 #> 6893 TCGA-24-1428-01 0 529 0 529 1 448 1 448 #> 6894 TCGA-24-1430-01 1 863 1 863 1 449 1 449 #> 6895 TCGA-24-1431-01 1 567 1 567 NA NA 1 199 #> 6896 TCGA-24-1434-01 1 568 1 568 NA NA 1 337 #> 6897 TCGA-24-1435-01 1 1324 1 1324 1 505 1 505 #> 6898 TCGA-24-1436-01 1 260 1 260 NA NA 1 260 #> 6899 TCGA-24-1463-01 1 2218 1 2218 1 971 1 971 #> 6900 TCGA-24-1464-01 1 379 1 379 NA NA 1 323 #> 6901 TCGA-24-1467-01 1 3224 1 3224 1 1253 1 1253 #> 6902 TCGA-24-1469-01 0 277 0 277 0 277 0 277 #> 6903 TCGA-24-1470-01 0 105 0 105 0 105 0 105 #> 6904 TCGA-24-1471-01 0 36 0 36 NA NA 0 36 #> 6905 TCGA-24-1474-01 1 676 1 676 NA NA 1 332 #> 6906 TCGA-24-1544-01 1 820 1 820 NA NA 1 643 #> 6907 TCGA-24-1545-01 1 1746 1 1746 1 861 1 861 #> 6908 TCGA-24-1546-01 1 1955 NA 1955 NA NA 0 1955 #> 6909 TCGA-24-1548-01 1 493 1 493 1 207 1 207 #> 6910 TCGA-24-1549-01 1 1721 1 1721 1 1042 1 1042 #> 6911 TCGA-24-1550-01 1 1249 1 1249 1 892 1 892 #> 6912 TCGA-24-1551-01 1 1579 1 1579 1 764 1 764 #> 6913 TCGA-24-1552-01 1 1259 1 1259 1 403 1 403 #> 6914 TCGA-24-1553-01 1 1767 1 1767 1 553 1 553 #> 6915 TCGA-24-1555-01 1 2692 1 2692 1 1577 1 1577 #> 6916 TCGA-24-1556-01 1 2148 1 2148 1 539 1 539 #> 6917 TCGA-24-1557-01 1 1213 1 1213 NA NA 1 447 #> 6918 TCGA-24-1558-01 1 594 1 594 NA NA 1 273 #> 6919 TCGA-24-1560-01 1 1341 1 1341 1 143 1 143 #> 6920 TCGA-24-1562-01 1 1384 1 1384 1 229 1 229 #> 6921 TCGA-24-1563-01 1 1451 1 1451 1 396 1 396 #> 6922 TCGA-24-1564-01 1 787 1 787 1 221 1 221 #> 6923 TCGA-24-1565-01 1 312 1 312 NA NA 1 145 #> 6924 TCGA-24-1567-01 1 524 1 524 NA NA 1 319 #> 6925 TCGA-24-1603-01 1 2742 1 2742 1 992 1 992 #> 6926 TCGA-24-1604-01 1 2688 1 2688 NA NA 1 2688 #> 6927 TCGA-24-1616-01 1 1163 1 1163 1 405 1 405 #> 6928 TCGA-24-1842-01 0 253 0 253 0 253 0 253 #> 6929 TCGA-24-1843-01 0 106 0 106 0 106 0 106 #> 6930 TCGA-24-1844-01 0 113 0 113 NA NA 0 113 #> 6931 TCGA-24-1845-01 0 116 0 116 NA NA 0 116 #> 6932 TCGA-24-1846-01 0 133 0 133 NA NA 0 133 #> 6933 TCGA-24-1849-01 0 176 0 176 0 176 0 176 #> 6934 TCGA-24-1850-01 0 168 0 168 0 168 0 168 #> 6935 TCGA-24-1923-01 1 690 1 690 1 343 1 343 #> 6936 TCGA-24-1924-01 1 919 1 919 1 320 1 320 #> 6937 TCGA-24-1928-01 1 336 1 336 NA NA 1 70 #> 6938 TCGA-24-1930-01 1 2467 1 2467 1 544 1 544 #> 6939 TCGA-24-2019-01 0 148 0 148 NA NA 0 148 #> 6940 TCGA-24-2020-01 1 4624 1 4624 1 723 1 723 #> 6941 TCGA-24-2023-01 1 1364 1 1364 1 1069 1 1069 #> 6942 TCGA-24-2024-01 1 1769 1 1769 1 421 1 421 #> 6943 TCGA-24-2026-01 1 1059 NA 1059 NA NA 0 1059 #> 6944 TCGA-24-2027-01 1 3337 1 3337 NA NA 1 617 #> 6945 TCGA-24-2033-01 1 562 1 562 NA NA 1 351 #> 6946 TCGA-24-2035-01 1 857 1 857 NA NA 1 287 #> 6947 TCGA-24-2036-01 1 1947 1 1947 1 914 1 914 #> 6948 TCGA-24-2038-01 1 1354 1 1354 1 1169 1 1169 #> 6949 TCGA-24-2254-01 1 1736 1 1736 1 606 1 606 #> 6950 TCGA-24-2261-01 1 24 1 24 NA NA 1 24 #> 6951 TCGA-24-2262-01 1 11 1 11 NA NA 1 11 #> 6952 TCGA-24-2267-01 1 1446 1 1446 1 512 1 512 #> 6953 TCGA-24-2271-01 1 962 1 962 NA NA 1 827 #> 6954 TCGA-24-2280-01 0 2143 0 2143 1 535 1 535 #> 6955 TCGA-24-2281-01 0 1357 0 1357 0 1357 0 1357 #> 6956 TCGA-24-2288-01 1 25 1 25 NA NA 1 25 #> 6957 TCGA-24-2289-01 1 2049 1 2049 NA NA 1 568 #> 6958 TCGA-24-2290-01 1 1102 1 1102 1 324 1 324 #> 6959 TCGA-24-2293-01 1 506 NA 506 NA NA 0 506 #> 6960 TCGA-24-2297-01 1 1699 NA 1699 0 1699 0 1699 #> 6961 TCGA-24-2298-01 1 1620 1 1620 1 469 1 469 #> 6962 TCGA-25-1312-01 1 31 NA 31 NA NA 0 31 #> 6963 TCGA-25-1313-01 1 820 1 820 NA NA 1 394 #> 6964 TCGA-25-1314-01 1 1004 1 1004 NA NA 1 274 #> 6965 TCGA-25-1315-01 1 1583 1 1583 NA NA 1 153 #> 6966 TCGA-25-1316-01 1 1279 1 1279 NA NA 1 276 #> 6967 TCGA-25-1317-01 1 61 NA 61 NA NA 0 61 #> 6968 TCGA-25-1318-01 1 1064 1 1064 NA NA 1 185 #> 6969 TCGA-25-1319-01 1 1977 NA 1977 NA NA 1 730 #> 6970 TCGA-25-1320-01 1 1155 1 1155 NA NA 1 424 #> 6971 TCGA-25-1321-01 1 1033 1 1033 1 454 1 454 #> 6972 TCGA-25-1322-01 1 91 1 91 NA NA 1 91 #> 6973 TCGA-25-1323-01 1 395 1 395 1 365 1 365 #> 6974 TCGA-25-1324-01 1 1035 NA 1035 NA NA 0 1035 #> 6975 TCGA-25-1326-01 1 1249 1 1249 NA NA 1 396 #> 6976 TCGA-25-1328-01 1 2009 1 2009 NA NA 1 244 #> 6977 TCGA-25-1329-01 1 457 NA 457 NA NA 0 457 #> 6978 TCGA-25-1623-01 1 565 1 565 NA NA 1 342 #> 6979 TCGA-25-1625-01 1 840 1 840 NA NA 1 526 #> 6980 TCGA-25-1626-01 1 518 1 518 NA NA 1 318 #> 6981 TCGA-25-1627-01 1 394 NA 394 NA NA 0 394 #> 6982 TCGA-25-1628-01 1 627 1 627 NA NA 1 287 #> 6983 TCGA-25-1630-01 1 1162 NA 1162 0 1162 0 1162 #> 6984 TCGA-25-1631-01 1 9 0 9 NA NA 0 9 #> 6985 TCGA-25-1632-01 1 1799 1 1799 NA NA 1 537 #> 6986 TCGA-25-1633-01 1 1891 1 1891 1 616 1 616 #> 6987 TCGA-25-1634-01 1 1091 1 1091 1 380 1 380 #> 6988 TCGA-25-1635-01 1 1583 1 1583 1 614 1 614 #> 6989 TCGA-25-1870-01 1 455 1 455 NA NA 1 243 #> 6990 TCGA-25-1871-01 1 760 1 760 NA NA 1 230 #> 6991 TCGA-25-1877-01 1 730 1 730 1 549 1 549 #> 6992 TCGA-25-2042-01 1 396 1 396 NA NA 1 396 #> 6993 TCGA-25-2391-01 1 1492 0 1492 0 1492 0 1492 #> 6994 TCGA-25-2392-01 1 31 NA 31 NA NA 0 31 #> 6995 TCGA-25-2393-01 1 1157 1 1157 NA NA 1 305 #> 6996 TCGA-25-2396-01 1 92 NA 92 NA NA 0 92 #> 6997 TCGA-25-2397-01 1 365 NA 365 NA NA 0 365 #> 6998 TCGA-25-2398-01 1 1369 1 1369 1 577 1 577 #> 6999 TCGA-25-2399-01 1 608 1 608 NA NA 1 243 #> 7000 TCGA-25-2400-01 1 1278 1 1278 1 577 1 577 #> 7001 TCGA-25-2401-01 1 90 NA 90 NA NA 0 90 #> 7002 TCGA-25-2404-01 1 883 1 883 1 426 1 426 #> 7003 TCGA-25-2409-01 1 821 1 821 NA NA 1 304 #> 7004 TCGA-29-1688-01 1 2400 1 2400 NA NA 1 184 #> 7005 TCGA-29-1690-01 1 1448 1 1448 NA NA 1 1448 #> 7006 TCGA-29-1691-01 1 1470 1 1470 1 613 1 613 #> 7007 TCGA-29-1693-01 0 3096 0 3096 1 694 1 694 #> 7008 TCGA-29-1694-01 1 1187 1 1187 NA NA 1 1187 #> 7009 TCGA-29-1695-01 1 1229 NA 1229 NA NA 0 1229 #> 7010 TCGA-29-1696-01 1 1032 1 1032 NA NA 1 342 #> 7011 TCGA-29-1697-01 1 949 1 949 1 500 1 500 #> 7012 TCGA-29-1698-01 0 2078 0 2078 1 181 1 181 #> 7013 TCGA-29-1699-01 1 1106 NA 1106 NA NA 0 1106 #> 7014 TCGA-29-1701-01 1 515 1 515 NA NA 1 298 #> 7015 TCGA-29-1702-01 1 728 1 728 1 286 1 286 #> 7016 TCGA-29-1703-01 1 1815 1 1815 1 324 1 324 #> 7017 TCGA-29-1705-02 1 555 1 555 1 283 1 283 #> 7018 TCGA-29-1705-01 1 555 1 555 1 283 1 283 #> 7019 TCGA-29-1707-02 0 1277 0 1277 1 1201 1 1201 #> 7020 TCGA-29-1710-01 1 951 1 951 NA NA 1 315 #> 7021 TCGA-29-1711-01 0 1053 0 1053 0 1053 0 1053 #> 7022 TCGA-29-1761-01 1 528 1 528 NA NA 1 528 #> 7023 TCGA-29-1762-01 1 2634 1 2634 NA NA 1 1375 #> 7024 TCGA-29-1763-01 0 2032 0 2032 1 428 1 428 #> 7025 TCGA-29-1766-01 1 1199 1 1199 NA NA 1 672 #> 7026 TCGA-29-1768-01 1 952 1 952 NA NA 1 547 #> 7027 TCGA-29-1769-01 0 699 0 699 0 699 0 699 #> 7028 TCGA-29-1770-02 0 741 0 741 1 377 1 377 #> 7029 TCGA-29-1770-01 0 741 0 741 1 377 1 377 #> 7030 TCGA-29-1774-01 0 527 0 527 NA NA 1 234 #> 7031 TCGA-29-1776-01 0 360 0 360 NA NA 0 360 #> 7032 TCGA-29-1777-01 0 374 0 374 NA NA 0 374 #> 7033 TCGA-29-1778-01 0 454 0 454 0 454 0 454 #> 7034 TCGA-29-1781-01 0 255 0 255 0 255 0 255 #> 7035 TCGA-29-1783-01 0 220 0 220 NA NA 0 220 #> 7036 TCGA-29-1784-01 0 163 0 163 0 163 0 163 #> 7037 TCGA-29-1785-01 1 1104 NA 1104 1 473 1 473 #> 7038 TCGA-29-2414-02 1 2621 1 2621 1 552 1 552 #> 7039 TCGA-29-2414-01 1 2621 1 2621 1 552 1 552 #> 7040 TCGA-29-2425-01 0 1977 0 1977 1 1577 1 1577 #> 7041 TCGA-29-2427-01 0 1900 0 1900 1 1582 1 1582 #> 7042 TCGA-29-2428-01 0 1372 0 1372 0 1372 0 1372 #> 7043 TCGA-29-A5NZ-01 1 1088 1 1088 1 358 1 358 #> 7044 TCGA-30-1714-01 1 1158 1 1158 NA NA 1 241 #> 7045 TCGA-30-1718-01 1 1579 1 1579 NA NA 1 896 #> 7046 TCGA-30-1853-01 1 1103 1 1103 1 634 1 634 #> 7047 TCGA-30-1855-01 1 75 1 75 NA NA 1 75 #> 7048 TCGA-30-1857-01 1 8 1 8 NA NA 1 8 #> 7049 TCGA-30-1860-01 1 1366 1 1366 1 397 1 397 #> 7050 TCGA-30-1861-01 1 1058 NA 1058 NA NA 0 1058 #> 7051 TCGA-30-1862-01 1 186 1 186 NA NA 1 186 #> 7052 TCGA-30-1866-01 1 1114 1 1114 NA NA 1 285 #> 7053 TCGA-30-1891-01 1 914 1 914 NA NA 1 181 #> 7054 TCGA-30-1892-01 1 1484 1 1484 1 253 1 253 #> 7055 TCGA-31-1944-01 0 1386 0 1386 1 678 1 678 #> 7056 TCGA-31-1946-01 0 918 0 918 NA NA 1 664 #> 7057 TCGA-31-1950-01 0 571 0 571 NA NA 1 349 #> 7058 TCGA-31-1951-01 0 684 0 684 NA NA 1 659 #> 7059 TCGA-31-1953-01 0 204 0 204 NA NA 1 70 #> 7060 TCGA-31-1956-01 0 1342 0 1342 NA NA 0 1342 #> 7061 TCGA-31-1959-01 0 67 0 67 NA NA 0 67 #> 7062 TCGA-36-1568-01 0 875 0 875 NA NA 1 548 #> 7063 TCGA-36-1569-01 0 885 0 885 NA NA 0 885 #> 7064 TCGA-36-1570-01 0 655 0 655 NA NA 1 375 #> 7065 TCGA-36-1571-01 1 695 1 695 1 375 1 375 #> 7066 TCGA-36-1574-01 0 686 0 686 1 648 1 648 #> 7067 TCGA-36-1575-01 0 260 0 260 NA NA 0 260 #> 7068 TCGA-36-1576-01 0 915 0 915 1 817 1 817 #> 7069 TCGA-36-1577-01 0 783 0 783 0 783 0 783 #> 7070 TCGA-36-1578-01 0 847 0 847 NA NA 1 310 #> 7071 TCGA-36-1580-01 1 737 1 737 NA NA 1 440 #> 7072 TCGA-36-1581-01 0 751 0 751 1 702 1 702 #> 7073 TCGA-3P-A9WA-01 0 420 0 420 0 420 0 420 #> 7074 TCGA-57-1582-01 1 731 1 731 NA NA 1 731 #> 7075 TCGA-57-1583-01 1 346 1 346 NA NA 1 346 #> 7076 TCGA-57-1584-01 0 643 0 643 NA NA 1 530 #> 7077 TCGA-57-1585-01 1 53 1 53 NA NA 1 53 #> 7078 TCGA-57-1586-01 0 679 0 679 NA NA 1 259 #> 7079 TCGA-57-1993-01 0 763 0 763 NA NA 0 763 #> 7080 TCGA-57-1994-01 0 761 0 761 NA NA 0 761 #> 7081 TCGA-59-2348-01 0 5481 0 5481 0 5481 0 5481 #> 7082 TCGA-59-2350-01 1 679 1 679 NA NA 1 211 #> 7083 TCGA-59-2351-01 0 3532 0 3532 1 2139 1 2139 #> 7084 TCGA-59-2352-01 1 286 1 286 NA NA 1 286 #> 7085 TCGA-59-2354-01 1 1046 1 1046 NA NA 1 462 #> 7086 TCGA-59-2355-01 1 65 1 65 NA NA 1 65 #> 7087 TCGA-59-2363-01 0 165 0 165 0 165 0 165 #> 7088 TCGA-59-A5PD-01 1 624 1 624 1 145 1 145 #> 7089 TCGA-5X-AA5U-01 0 361 0 361 0 361 0 361 #> 7090 TCGA-61-1721-01 0 338 0 338 NA NA 0 338 #> 7091 TCGA-61-1724-01 1 637 1 637 NA NA 1 637 #> 7092 TCGA-61-1725-01 0 956 0 956 NA NA 1 844 #> 7093 TCGA-61-1728-01 0 848 0 848 NA NA 1 533 #> 7094 TCGA-61-1733-01 0 967 0 967 NA NA 1 175 #> 7095 TCGA-61-1736-01 1 1484 1 1484 1 764 1 764 #> 7096 TCGA-61-1737-01 0 1364 0 1364 NA NA 0 1364 #> 7097 TCGA-61-1738-01 1 1089 1 1089 NA NA 1 276 #> 7098 TCGA-61-1740-01 1 74 1 74 NA NA 1 74 #> 7099 TCGA-61-1741-01 1 1024 1 1024 1 488 1 488 #> 7100 TCGA-61-1743-01 1 1329 1 1329 1 809 1 809 #> 7101 TCGA-61-1900-01 0 176 0 176 NA NA 0 176 #> 7102 TCGA-61-1907-01 0 952 0 952 NA NA 1 743 #> 7103 TCGA-61-1910-01 0 1127 0 1127 0 1127 0 1127 #> 7104 TCGA-61-1911-01 0 1293 0 1293 1 844 1 844 #> 7105 TCGA-61-1914-01 0 1722 0 1722 1 1674 1 1674 #> 7106 TCGA-61-1917-01 1 1321 NA 1321 0 1321 0 1321 #> 7107 TCGA-61-1918-01 1 479 1 479 NA NA 1 413 #> 7108 TCGA-61-1919-01 1 1161 NA 1161 1 439 1 439 #> 7109 TCGA-61-1995-01 0 61 0 61 NA NA 0 61 #> 7110 TCGA-61-1998-01 0 168 0 168 NA NA 0 168 #> 7111 TCGA-61-2000-01 0 441 0 441 NA NA 1 339 #> 7112 TCGA-61-2002-01 0 547 0 547 NA NA 0 547 #> 7113 TCGA-61-2003-01 0 122 0 122 NA NA 0 122 #> 7114 TCGA-61-2008-02 0 932 0 932 1 818 1 818 #> 7115 TCGA-61-2008-01 0 932 0 932 1 818 1 818 #> 7116 TCGA-61-2009-01 0 1212 0 1212 1 101 1 101 #> 7117 TCGA-61-2012-01 0 932 0 932 NA NA 0 932 #> 7118 TCGA-61-2016-01 1 36 1 36 NA NA 1 36 #> 7119 TCGA-61-2088-01 0 145 0 145 NA NA 0 145 #> 7120 TCGA-61-2092-01 0 1573 0 1573 0 1573 0 1573 #> 7121 TCGA-61-2094-01 0 2182 0 2182 0 2182 0 2182 #> 7122 TCGA-61-2095-01 1 1875 1 1875 1 445 1 445 #> 7123 TCGA-61-2097-01 0 1844 0 1844 0 1844 0 1844 #> 7124 TCGA-61-2098-01 0 1993 0 1993 0 1993 0 1993 #> 7125 TCGA-61-2101-01 1 1688 1 1688 NA NA 1 1688 #> 7126 TCGA-61-2102-01 1 197 1 197 NA NA 1 197 #> 7127 TCGA-61-2104-01 0 2338 0 2338 1 1680 1 1680 #> 7128 TCGA-61-2109-01 1 629 1 629 NA NA 1 465 #> 7129 TCGA-61-2110-01 1 1354 1 1354 NA NA 1 213 #> 7130 TCGA-61-2111-01 0 3825 0 3825 NA NA 1 2205 #> 7131 TCGA-61-2113-01 1 676 NA 676 NA NA 1 291 #> 7132 TCGA-OY-A56P-01 0 1207 0 1207 1 794 1 794 #> 7133 TCGA-OY-A56Q-01 0 576 0 576 0 576 0 576 #> 7134 TCGA-VG-A8LO-01 1 24 1 24 NA NA 1 24 #> 7135 TCGA-WR-A838-01 1 304 1 304 NA NA 1 245 #> 7136 TCGA-2J-AAB1-01 1 66 1 66 0 66 0 66 #> 7137 TCGA-2J-AAB4-01 0 729 0 729 0 729 0 729 #> 7138 TCGA-2J-AAB6-01 1 293 1 293 NA NA 1 169 #> 7139 TCGA-2J-AAB8-01 0 80 0 80 NA NA 0 80 #> 7140 TCGA-2J-AAB9-01 1 627 1 627 1 521 1 521 #> 7141 TCGA-2J-AABA-01 1 607 1 607 NA NA 1 160 #> 7142 TCGA-2J-AABE-01 0 676 0 676 0 676 0 676 #> 7143 TCGA-2J-AABF-01 1 691 1 691 NA NA 1 443 #> 7144 TCGA-2J-AABH-01 0 1287 0 1287 1 1287 1 1287 #> 7145 TCGA-2J-AABI-01 0 969 0 969 NA NA 1 728 #> 7146 TCGA-2J-AABK-01 0 484 0 484 0 484 0 484 #> 7147 TCGA-2J-AABO-01 0 440 0 440 NA NA 1 439 #> 7148 TCGA-2J-AABP-01 0 463 0 463 0 463 0 463 #> 7149 TCGA-2J-AABR-01 0 438 0 438 NA NA 1 327 #> 7150 TCGA-2J-AABT-01 0 319 0 319 NA NA 0 319 #> 7151 TCGA-2J-AABU-01 1 277 1 277 NA NA 1 154 #> 7152 TCGA-2J-AABV-01 1 652 1 652 NA NA 1 126 #> 7153 TCGA-2L-AAQA-01 1 143 1 143 NA NA 1 143 #> 7154 TCGA-2L-AAQE-01 1 684 1 684 NA NA 1 684 #> 7155 TCGA-2L-AAQI-01 1 103 1 103 NA NA 1 103 #> 7156 TCGA-2L-AAQJ-01 1 394 1 394 NA NA 1 394 #> 7157 TCGA-2L-AAQL-01 1 292 1 292 NA NA 1 292 #> 7158 TCGA-2L-AAQM-01 0 1383 0 1383 NA NA 0 1383 #> 7159 TCGA-3A-A9I5-01 0 1794 0 1794 0 1794 0 1794 #> 7160 TCGA-3A-A9I7-01 0 1323 0 1323 NA NA 1 1309 #> 7161 TCGA-3A-A9I9-01 1 634 1 634 NA NA 1 513 #> 7162 TCGA-3A-A9IB-01 1 224 NA 224 NA NA 0 224 #> 7163 TCGA-3A-A9IC-01 1 738 1 738 NA NA 1 738 #> 7164 TCGA-3A-A9IH-01 0 1021 0 1021 NA NA 1 763 #> 7165 TCGA-3A-A9IJ-01 0 1854 0 1854 0 1854 0 1854 #> 7166 TCGA-3A-A9IL-01 0 2741 0 2741 NA NA 0 2741 #> 7167 TCGA-3A-A9IN-01 0 2084 0 2084 0 2084 0 2084 #> 7168 TCGA-3A-A9IO-01 0 1942 0 1942 NA NA 0 1942 #> 7169 TCGA-3A-A9IR-01 0 1542 0 1542 0 1542 0 1542 #> 7170 TCGA-3A-A9IS-01 0 998 0 998 0 998 0 998 #> 7171 TCGA-3A-A9IU-01 1 458 1 458 NA NA 1 371 #> 7172 TCGA-3A-A9IV-01 0 1103 0 1103 0 1103 0 1103 #> 7173 TCGA-3A-A9IX-01 0 1037 0 1037 0 1037 0 1037 #> 7174 TCGA-3A-A9IZ-01 1 308 1 308 NA NA 1 109 #> 7175 TCGA-3A-A9J0-01 0 743 0 743 NA NA 1 363 #> 7176 TCGA-3E-AAAY-01 0 2285 0 2285 1 987 1 987 #> 7177 TCGA-3E-AAAZ-01 1 2182 0 2182 NA NA 1 1600 #> 7178 TCGA-F2-6879-01 1 334 1 334 1 183 1 183 #> 7179 TCGA-F2-6880-01 0 295 0 295 0 295 0 295 #> 7180 TCGA-F2-7273-01 1 592 1 592 NA NA 1 256 #> 7181 TCGA-F2-7276-01 1 216 1 216 NA NA 1 216 #> 7182 TCGA-F2-A44G-01 1 233 1 233 1 214 1 214 #> 7183 TCGA-F2-A44H-01 0 586 0 586 0 586 0 586 #> 7184 TCGA-F2-A7TX-01 1 95 1 95 NA NA 1 95 #> 7185 TCGA-F2-A8YN-01 0 517 0 517 NA NA 0 517 #> 7186 TCGA-FB-A4P5-01 1 179 1 179 NA NA 1 179 #> 7187 TCGA-FB-A4P6-01 0 767 0 767 1 620 1 620 #> 7188 TCGA-FB-A545-01 1 732 1 732 1 378 1 378 #> 7189 TCGA-FB-A5VM-01 1 498 1 498 NA NA 1 177 #> 7190 TCGA-FB-A78T-01 1 375 1 375 0 375 0 375 #> 7191 TCGA-FB-A7DR-01 1 353 1 353 0 353 0 353 #> 7192 TCGA-FB-AAPP-01 1 485 1 485 NA NA 1 150 #> 7193 TCGA-FB-AAPQ-01 1 1130 NA 1130 NA NA 0 1130 #> 7194 TCGA-FB-AAPS-01 0 228 0 228 NA NA 0 228 #> 7195 TCGA-FB-AAPU-01 1 381 1 381 NA NA 1 381 #> 7196 TCGA-FB-AAPY-01 1 1059 0 1059 0 1059 0 1059 #> 7197 TCGA-FB-AAPZ-01 0 716 0 716 1 716 1 716 #> 7198 TCGA-FB-AAQ0-01 1 473 0 473 0 473 0 473 #> 7199 TCGA-FB-AAQ1-01 1 123 1 123 NA NA 1 123 #> 7200 TCGA-FB-AAQ2-01 1 153 1 153 NA NA 1 92 #> 7201 TCGA-FB-AAQ3-01 1 31 0 31 0 31 0 31 #> 7202 TCGA-FB-AAQ6-01 1 244 1 244 NA NA 1 213 #> 7203 TCGA-H6-8124-01 0 392 0 392 1 259 1 259 #> 7204 TCGA-H6-8124-11 0 392 0 392 1 259 1 259 #> 7205 TCGA-H6-A45N-01 1 421 1 421 NA NA 1 363 #> 7206 TCGA-H6-A45N-11 1 421 1 421 NA NA 1 363 #> 7207 TCGA-H8-A6C1-01 0 671 0 671 NA NA 1 455 #> 7208 TCGA-HV-A5A3-01 1 128 0 128 0 128 0 128 #> 7209 TCGA-HV-A5A3-11 1 128 0 128 0 128 0 128 #> 7210 TCGA-HV-A5A4-01 0 232 0 232 0 232 0 232 #> 7211 TCGA-HV-A5A5-01 0 289 0 289 0 289 0 289 #> 7212 TCGA-HV-A5A6-01 1 2036 0 2036 1 1511 1 1511 #> 7213 TCGA-HV-A7OL-01 0 252 0 252 NA NA 1 123 #> 7214 TCGA-HV-A7OP-01 0 978 0 978 NA NA 1 342 #> 7215 TCGA-HV-AA8V-01 0 920 0 920 NA NA 1 526 #> 7216 TCGA-HV-AA8X-01 1 532 1 532 NA NA 1 375 #> 7217 TCGA-HZ-7289-01 1 661 1 661 NA NA 1 228 #> 7218 TCGA-HZ-7918-01 0 969 0 969 1 542 1 542 #> 7219 TCGA-HZ-7919-01 1 593 1 593 NA NA 1 593 #> 7220 TCGA-HZ-7920-01 1 236 0 236 0 236 0 236 #> 7221 TCGA-HZ-7922-01 0 4 0 4 NA NA 0 4 #> 7222 TCGA-HZ-7923-01 0 314 0 314 0 314 0 314 #> 7223 TCGA-HZ-7924-01 0 840 0 840 1 831 1 831 #> 7224 TCGA-HZ-7925-01 1 614 1 614 1 364 1 364 #> 7225 TCGA-HZ-7926-01 1 518 1 518 NA NA 1 340 #> 7226 TCGA-HZ-8001-01 0 706 0 706 0 706 0 706 #> 7227 TCGA-HZ-8002-01 1 366 1 366 NA NA 1 366 #> 7228 TCGA-HZ-8003-01 1 596 1 596 NA NA 1 596 #> 7229 TCGA-HZ-8005-01 1 120 1 120 NA NA 1 120 #> 7230 TCGA-HZ-8315-01 1 299 1 299 NA NA 1 299 #> 7231 TCGA-HZ-8317-01 1 378 1 378 NA NA 1 378 #> 7232 TCGA-HZ-8519-01 0 454 0 454 0 454 0 454 #> 7233 TCGA-HZ-8636-01 1 545 1 545 NA NA 1 545 #> 7234 TCGA-HZ-8637-01 1 517 0 517 0 517 0 517 #> 7235 TCGA-HZ-8638-01 1 151 0 151 0 151 0 151 #> 7236 TCGA-HZ-A49G-01 0 660 0 660 NA NA 0 660 #> 7237 TCGA-HZ-A49H-01 0 491 0 491 0 491 0 491 #> 7238 TCGA-HZ-A49I-01 1 308 1 308 NA NA 1 308 #> 7239 TCGA-HZ-A4BH-01 0 194 0 194 NA NA 0 194 #> 7240 TCGA-HZ-A4BK-01 0 657 0 657 NA NA 0 657 #> 7241 TCGA-HZ-A77O-01 1 160 1 160 1 98 1 98 #> 7242 TCGA-HZ-A77P-01 0 330 0 330 0 330 0 330 #> 7243 TCGA-HZ-A77Q-01 0 33 0 33 NA NA 0 33 #> 7244 TCGA-HZ-A8P0-01 0 0 0 0 NA NA 0 0 #> 7245 TCGA-HZ-A8P1-01 0 7 0 7 NA NA 0 7 #> 7246 TCGA-HZ-A9TJ-06 0 603 0 603 NA NA 1 555 #> 7247 TCGA-HZ-A9TJ-01 0 603 0 603 NA NA 1 555 #> 7248 TCGA-IB-7644-01 1 394 1 394 NA NA 1 306 #> 7249 TCGA-IB-7645-01 1 1502 1 1502 NA NA 1 984 #> 7250 TCGA-IB-7646-01 1 145 1 145 NA NA 1 132 #> 7251 TCGA-IB-7647-01 1 666 1 666 NA NA 1 390 #> 7252 TCGA-IB-7649-01 1 467 NA 467 NA NA 1 282 #> 7253 TCGA-IB-7651-01 1 603 1 603 1 492 1 492 #> 7254 TCGA-IB-7652-01 0 1116 0 1116 0 1116 0 1116 #> 7255 TCGA-IB-7654-01 1 476 0 476 NA NA 1 476 #> 7256 TCGA-IB-7885-01 0 1257 0 1257 0 1257 0 1257 #> 7257 TCGA-IB-7886-01 1 123 0 123 0 123 0 123 #> 7258 TCGA-IB-7887-01 1 110 1 110 NA NA 0 110 #> 7259 TCGA-IB-7888-01 1 1332 1 1332 NA NA 1 427 #> 7260 TCGA-IB-7889-01 1 481 1 481 NA NA 1 352 #> 7261 TCGA-IB-7890-01 1 598 1 598 NA NA 1 519 #> 7262 TCGA-IB-7891-01 1 913 1 913 1 525 1 525 #> 7263 TCGA-IB-7893-01 1 117 1 117 NA NA 1 80 #> 7264 TCGA-IB-7897-01 1 486 1 486 NA NA 1 397 #> 7265 TCGA-IB-8126-01 0 462 0 462 NA NA 1 83 #> 7266 TCGA-IB-8127-01 0 522 0 522 1 486 1 486 #> 7267 TCGA-IB-A5SO-01 1 365 1 365 NA NA 1 276 #> 7268 TCGA-IB-A5SP-01 0 482 0 482 NA NA 1 300 #> 7269 TCGA-IB-A5SQ-01 1 219 1 219 1 197 1 197 #> 7270 TCGA-IB-A5SS-01 1 460 1 460 1 66 1 66 #> 7271 TCGA-IB-A5ST-01 0 635 0 635 0 635 0 635 #> 7272 TCGA-IB-A6UF-01 0 666 0 666 NA NA 1 593 #> 7273 TCGA-IB-A6UG-01 1 41 0 41 NA NA 1 41 #> 7274 TCGA-IB-A7LX-01 1 250 1 250 NA NA 1 7 #> 7275 TCGA-IB-A7M4-01 0 483 0 483 0 483 0 483 #> 7276 TCGA-IB-AAUM-01 0 8 0 8 NA NA 0 8 #> 7277 TCGA-IB-AAUN-01 1 144 NA 144 1 131 1 131 #> 7278 TCGA-IB-AAUO-01 1 239 1 239 NA NA 1 74 #> 7279 TCGA-IB-AAUP-01 0 431 0 431 0 431 0 431 #> 7280 TCGA-IB-AAUQ-01 1 183 1 183 NA NA 1 107 #> 7281 TCGA-IB-AAUR-01 0 338 0 338 NA NA 1 318 #> 7282 TCGA-IB-AAUS-01 0 225 0 225 NA NA 0 225 #> 7283 TCGA-IB-AAUT-01 0 287 0 287 0 287 0 287 #> 7284 TCGA-IB-AAUU-01 0 245 0 245 0 245 0 245 #> 7285 TCGA-IB-AAUV-01 0 404 0 404 0 404 0 404 #> 7286 TCGA-IB-AAUW-01 1 230 1 230 1 185 1 185 #> 7287 TCGA-L1-A7W4-01 1 278 1 278 NA NA 1 129 #> 7288 TCGA-LB-A7SX-01 1 393 0 393 NA NA 0 393 #> 7289 TCGA-LB-A8F3-01 0 379 0 379 NA NA 0 379 #> 7290 TCGA-LB-A9Q5-01 1 313 1 313 NA NA 1 290 #> 7291 TCGA-M8-A5N4-01 0 584 0 584 NA NA 1 416 #> 7292 TCGA-OE-A75W-01 1 267 NA 267 NA NA 1 146 #> 7293 TCGA-PZ-A5RE-01 1 470 1 470 NA NA 1 393 #> 7294 TCGA-Q3-A5QY-01 0 416 0 416 NA NA 0 416 #> 7295 TCGA-Q3-AA2A-01 0 95 0 95 NA NA 0 95 #> 7296 TCGA-RB-A7B8-01 1 466 1 466 1 449 1 449 #> 7297 TCGA-RB-AA9M-01 0 286 0 286 NA NA 1 258 #> 7298 TCGA-RL-AAAS-01 0 9 0 9 0 9 0 9 #> 7299 TCGA-S4-A8RM-01 0 737 0 737 0 737 0 737 #> 7300 TCGA-S4-A8RO-01 0 525 0 525 1 291 1 291 #> 7301 TCGA-S4-A8RP-01 1 702 NA 702 NA NA 0 702 #> 7302 TCGA-US-A774-01 1 695 1 695 NA NA 1 366 #> 7303 TCGA-US-A776-01 0 1216 0 1216 0 1216 0 1216 #> 7304 TCGA-US-A779-01 1 511 1 511 NA NA 1 511 #> 7305 TCGA-US-A77E-01 1 430 1 430 NA NA 1 166 #> 7306 TCGA-US-A77G-01 1 12 0 12 NA NA 0 12 #> 7307 TCGA-US-A77J-01 1 568 1 568 NA NA 1 568 #> 7308 TCGA-XD-AAUG-01 0 420 0 420 NA NA 0 420 #> 7309 TCGA-XD-AAUH-01 0 395 0 395 NA NA 1 87 #> 7310 TCGA-XD-AAUI-01 1 366 1 366 NA NA 1 175 #> 7311 TCGA-XD-AAUL-01 0 498 0 498 0 498 0 498 #> 7312 TCGA-XN-A8T3-01 0 951 0 951 NA NA 0 951 #> 7313 TCGA-XN-A8T5-01 0 720 0 720 NA NA 1 242 #> 7314 TCGA-YB-A89D-01 0 350 0 350 0 350 0 350 #> 7315 TCGA-YB-A89D-11 0 350 0 350 0 350 0 350 #> 7316 TCGA-YH-A8SY-01 0 388 0 388 NA NA 0 388 #> 7317 TCGA-YY-A8LH-01 0 2016 0 2016 0 2016 0 2016 #> 7318 TCGA-Z5-AAPL-01 0 467 0 467 0 467 0 467 #> 7319 TCGA-P7-A5NX-01 0 818 0 818 0 818 0 818 #> 7320 TCGA-P7-A5NY-05 0 957 0 957 0 957 0 957 #> 7321 TCGA-P7-A5NY-01 0 957 0 957 0 957 0 957 #> 7322 TCGA-P8-A5KC-01 0 883 0 883 0 883 0 883 #> 7323 TCGA-P8-A5KC-11 0 883 0 883 0 883 0 883 #> 7324 TCGA-P8-A5KD-01 0 123 0 123 NA NA 0 123 #> 7325 TCGA-P8-A5KD-11 0 123 0 123 NA NA 0 123 #> 7326 TCGA-P8-A6RX-01 0 540 0 540 NA NA 0 540 #> 7327 TCGA-P8-A6RY-01 0 179 0 179 NA NA 0 179 #> 7328 TCGA-PR-A5PF-01 0 546 0 546 0 546 0 546 #> 7329 TCGA-PR-A5PG-01 0 2485 0 2485 1 2278 1 2278 #> 7330 TCGA-PR-A5PH-01 0 854 0 854 0 854 0 854 #> 7331 TCGA-QR-A6GO-01 0 1065 0 1065 0 1065 0 1065 #> 7332 TCGA-QR-A6GR-01 0 703 0 703 0 703 0 703 #> 7333 TCGA-QR-A6GS-01 0 38 0 38 0 38 0 38 #> 7334 TCGA-QR-A6GT-01 0 4185 0 4185 NA NA 1 1476 #> 7335 TCGA-QR-A6GU-01 0 1791 0 1791 0 1791 0 1791 #> 7336 TCGA-QR-A6GW-01 0 491 0 491 0 491 0 491 #> 7337 TCGA-QR-A6GX-01 0 579 0 579 0 579 0 579 #> 7338 TCGA-QR-A6GY-01 0 32 0 32 0 32 0 32 #> 7339 TCGA-QR-A6GZ-05 0 928 0 928 0 928 0 928 #> 7340 TCGA-QR-A6GZ-01 0 928 0 928 0 928 0 928 #> 7341 TCGA-QR-A6H0-01 0 280 0 280 0 280 0 280 #> 7342 TCGA-QR-A6H1-01 0 431 0 431 0 431 0 431 #> 7343 TCGA-QR-A6H2-01 0 302 0 302 0 302 0 302 #> 7344 TCGA-QR-A6H3-01 0 434 0 434 0 434 0 434 #> 7345 TCGA-QR-A6H4-01 0 2661 0 2661 0 2661 0 2661 #> 7346 TCGA-QR-A6H5-01 0 959 0 959 0 959 0 959 #> 7347 TCGA-QR-A6H6-01 0 474 0 474 0 474 0 474 #> 7348 TCGA-QR-A6ZZ-01 0 48 0 48 0 48 0 48 #> 7349 TCGA-QR-A700-01 0 978 0 978 NA NA 1 606 #> 7350 TCGA-QR-A702-01 0 39 0 39 0 39 0 39 #> 7351 TCGA-QR-A703-01 0 1167 0 1167 0 1167 1 0 #> 7352 TCGA-QR-A705-01 0 317 0 317 0 317 0 317 #> 7353 TCGA-QR-A706-01 0 125 0 125 0 125 0 125 #> 7354 TCGA-QR-A707-01 0 398 0 398 0 398 0 398 #> 7355 TCGA-QR-A708-01 0 35 0 35 0 35 0 35 #> 7356 TCGA-QR-A70A-01 0 2119 0 2119 0 2119 0 2119 #> 7357 TCGA-QR-A70C-01 0 3534 0 3534 0 3534 0 3534 #> 7358 TCGA-QR-A70D-01 0 7 0 7 0 7 0 7 #> 7359 TCGA-QR-A70E-01 0 192 0 192 0 192 0 192 #> 7360 TCGA-QR-A70H-01 0 816 0 816 0 816 0 816 #> 7361 TCGA-QR-A70I-01 0 910 0 910 0 910 0 910 #> 7362 TCGA-QR-A70J-01 0 399 0 399 0 399 0 399 #> 7363 TCGA-QR-A70K-01 0 274 0 274 0 274 0 274 #> 7364 TCGA-QR-A70M-01 0 1034 0 1034 0 1034 0 1034 #> 7365 TCGA-QR-A70N-01 0 43 0 43 0 43 0 43 #> 7366 TCGA-QR-A70P-01 1 3563 1 3563 NA NA 1 648 #> 7367 TCGA-QR-A70Q-01 0 140 0 140 0 140 0 140 #> 7368 TCGA-QR-A70R-01 0 432 0 432 0 432 0 432 #> 7369 TCGA-QR-A70T-01 0 267 0 267 0 267 0 267 #> 7370 TCGA-QR-A70U-01 0 1473 0 1473 0 1473 0 1473 #> 7371 TCGA-QR-A70V-01 0 2 0 2 0 2 0 2 #> 7372 TCGA-QR-A70W-01 0 1271 0 1271 0 1271 0 1271 #> 7373 TCGA-QR-A70X-01 0 183 0 183 0 183 0 183 #> 7374 TCGA-QR-A7IN-01 0 377 0 377 0 377 0 377 #> 7375 TCGA-QR-A7IP-01 0 546 0 546 0 546 0 546 #> 7376 TCGA-QT-A5XJ-01 0 1102 0 1102 NA NA 1 77 #> 7377 TCGA-QT-A5XK-01 0 211 0 211 0 211 0 211 #> 7378 TCGA-QT-A5XL-01 0 55 0 55 0 55 0 55 #> 7379 TCGA-QT-A5XM-01 0 22 0 22 0 22 0 22 #> 7380 TCGA-QT-A5XN-01 0 766 0 766 0 766 0 766 #> 7381 TCGA-QT-A5XO-01 0 70 0 70 0 70 0 70 #> 7382 TCGA-QT-A5XP-01 0 134 0 134 0 134 0 134 #> 7383 TCGA-QT-A69Q-01 0 24 0 24 0 24 0 24 #> 7384 TCGA-QT-A7U0-01 0 398 0 398 0 398 0 398 #> 7385 TCGA-RM-A68T-01 0 2372 0 2372 0 2372 0 2372 #> 7386 TCGA-RM-A68W-01 0 28 0 28 0 28 0 28 #> 7387 TCGA-RT-A6Y9-01 0 3293 0 3293 0 3293 1 3282 #> 7388 TCGA-RT-A6YA-01 0 1540 0 1540 0 1540 0 1540 #> 7389 TCGA-RT-A6YC-01 0 246 0 246 0 246 0 246 #> 7390 TCGA-RW-A67V-01 0 2643 0 2643 NA NA 1 551 #> 7391 TCGA-RW-A67W-01 0 604 0 604 0 604 0 604 #> 7392 TCGA-RW-A67X-01 0 89 0 89 0 89 0 89 #> 7393 TCGA-RW-A67Y-01 0 216 0 216 0 216 0 216 #> 7394 TCGA-RW-A680-01 0 1449 0 1449 0 1449 0 1449 #> 7395 TCGA-RW-A681-01 0 1141 0 1141 0 1141 0 1141 #> 7396 TCGA-RW-A684-01 0 32 0 32 0 32 0 32 #> 7397 TCGA-RW-A685-01 0 26 0 26 0 26 0 26 #> 7398 TCGA-RW-A686-06 0 587 0 587 0 587 0 587 #> 7399 TCGA-RW-A686-01 0 587 0 587 0 587 0 587 #> 7400 TCGA-RW-A688-01 0 37 0 37 0 37 1 27 #> 7401 TCGA-RW-A689-01 0 828 0 828 0 828 0 828 #> 7402 TCGA-RW-A68A-01 0 762 0 762 0 762 0 762 #> 7403 TCGA-RW-A68B-01 0 727 0 727 0 727 0 727 #> 7404 TCGA-RW-A68C-01 0 191 0 191 0 191 0 191 #> 7405 TCGA-RW-A68D-01 0 2214 0 2214 0 2214 0 2214 #> 7406 TCGA-RW-A68F-01 0 1354 0 1354 0 1354 0 1354 #> 7407 TCGA-RW-A68G-01 0 1274 0 1274 0 1274 0 1274 #> 7408 TCGA-RW-A7CZ-01 0 422 0 422 0 422 0 422 #> 7409 TCGA-RW-A7D0-01 0 352 0 352 0 352 0 352 #> 7410 TCGA-RW-A8AZ-01 1 88 0 88 NA NA 0 88 #> 7411 TCGA-RX-A8JQ-01 0 611 0 611 0 611 0 611 #> 7412 TCGA-S7-A7WL-01 0 961 0 961 0 961 0 961 #> 7413 TCGA-S7-A7WM-01 0 1112 0 1112 0 1112 0 1112 #> 7414 TCGA-S7-A7WN-01 0 1133 0 1133 0 1133 0 1133 #> 7415 TCGA-S7-A7WO-01 0 1080 0 1080 0 1080 0 1080 #> 7416 TCGA-S7-A7WP-01 0 944 0 944 0 944 0 944 #> 7417 TCGA-S7-A7WQ-01 0 820 0 820 0 820 0 820 #> 7418 TCGA-S7-A7WR-01 0 1238 0 1238 0 1238 0 1238 #> 7419 TCGA-S7-A7WT-01 0 1301 0 1301 0 1301 0 1301 #> 7420 TCGA-S7-A7WU-01 0 928 0 928 0 928 0 928 #> 7421 TCGA-S7-A7WV-01 0 849 0 849 0 849 0 849 #> 7422 TCGA-S7-A7WW-01 0 706 0 706 0 706 0 706 #> 7423 TCGA-S7-A7WX-01 0 770 0 770 0 770 0 770 #> 7424 TCGA-S7-A7X0-01 0 546 0 546 0 546 0 546 #> 7425 TCGA-S7-A7X1-01 0 576 0 576 0 576 0 576 #> 7426 TCGA-S7-A7X2-01 0 736 0 736 0 736 0 736 #> 7427 TCGA-SA-A6C2-01 0 296 0 296 0 296 0 296 #> 7428 TCGA-SP-A6QC-01 0 3491 0 3491 0 3491 0 3491 #> 7429 TCGA-SP-A6QD-01 0 3323 0 3323 0 3323 0 3323 #> 7430 TCGA-SP-A6QF-01 0 2513 0 2513 0 2513 1 588 #> 7431 TCGA-SP-A6QG-01 0 2417 0 2417 0 2417 1 626 #> 7432 TCGA-SP-A6QH-01 0 2203 0 2203 0 2203 0 2203 #> 7433 TCGA-SP-A6QI-01 0 3347 0 3347 0 3347 0 3347 #> 7434 TCGA-SP-A6QJ-01 0 472 0 472 0 472 0 472 #> 7435 TCGA-SP-A6QK-01 0 3384 0 3384 0 3384 0 3384 #> 7436 TCGA-SQ-A6I4-01 0 43 0 43 NA NA 0 43 #> 7437 TCGA-SQ-A6I4-11 0 43 0 43 NA NA 0 43 #> 7438 TCGA-SQ-A6I6-01 0 3 0 3 NA NA 0 3 #> 7439 TCGA-SR-A6MP-01 0 1558 0 1558 0 1558 0 1558 #> 7440 TCGA-SR-A6MQ-01 0 2087 0 2087 0 2087 0 2087 #> 7441 TCGA-SR-A6MR-01 0 2409 0 2409 NA NA 1 928 #> 7442 TCGA-SR-A6MS-01 0 2492 0 2492 0 2492 0 2492 #> 7443 TCGA-SR-A6MT-01 0 3247 0 3247 0 3247 0 3247 #> 7444 TCGA-SR-A6MU-01 0 3362 0 3362 0 3362 0 3362 #> 7445 TCGA-SR-A6MV-01 0 3682 0 3682 NA NA 0 3682 #> 7446 TCGA-SR-A6MX-06 1 95 1 95 NA NA 1 95 #> 7447 TCGA-SR-A6MX-05 1 95 1 95 NA NA 1 95 #> 7448 TCGA-SR-A6MX-01 1 95 1 95 NA NA 1 95 #> 7449 TCGA-SR-A6MY-01 0 750 0 750 0 750 0 750 #> 7450 TCGA-SR-A6MZ-01 0 797 0 797 0 797 0 797 #> 7451 TCGA-SR-A6N0-01 0 1509 0 1509 0 1509 0 1509 #> 7452 TCGA-TT-A6YJ-01 0 132 0 132 0 132 0 132 #> 7453 TCGA-TT-A6YK-01 0 1136 0 1136 0 1136 0 1136 #> 7454 TCGA-TT-A6YN-01 0 606 0 606 0 606 0 606 #> 7455 TCGA-TT-A6YO-01 0 405 0 405 1 377 1 377 #> 7456 TCGA-TT-A6YP-01 0 1292 0 1292 0 1292 0 1292 #> 7457 TCGA-W2-A7H5-01 0 611 0 611 0 611 0 611 #> 7458 TCGA-W2-A7H7-01 0 522 0 522 0 522 0 522 #> 7459 TCGA-W2-A7HA-01 0 36 0 36 0 36 0 36 #> 7460 TCGA-W2-A7HB-01 0 604 0 604 0 604 0 604 #> 7461 TCGA-W2-A7HC-01 0 439 0 439 0 439 0 439 #> 7462 TCGA-W2-A7HD-01 0 561 0 561 0 561 0 561 #> 7463 TCGA-W2-A7HE-01 0 505 0 505 0 505 0 505 #> 7464 TCGA-W2-A7HF-01 0 538 0 538 0 538 0 538 #> 7465 TCGA-W2-A7HH-01 0 779 0 779 0 779 0 779 #> 7466 TCGA-W2-A7UY-01 0 450 0 450 NA NA 0 450 #> 7467 TCGA-WB-A80K-01 0 1255 0 1255 1 772 1 772 #> 7468 TCGA-WB-A80L-01 0 1042 0 1042 0 1042 0 1042 #> 7469 TCGA-WB-A80M-01 0 136 0 136 0 136 0 136 #> 7470 TCGA-WB-A80N-01 0 144 0 144 0 144 0 144 #> 7471 TCGA-WB-A80O-01 0 776 0 776 0 776 0 776 #> 7472 TCGA-WB-A80P-01 0 9634 0 9634 NA NA 1 6866 #> 7473 TCGA-WB-A80Q-01 0 3880 0 3880 0 3880 0 3880 #> 7474 TCGA-WB-A80V-01 0 887 0 887 0 887 0 887 #> 7475 TCGA-WB-A80Y-01 1 596 0 596 0 596 0 596 #> 7476 TCGA-WB-A814-01 0 2252 0 2252 0 2252 0 2252 #> 7477 TCGA-WB-A815-01 0 1630 0 1630 0 1630 0 1630 #> 7478 TCGA-WB-A816-01 0 1254 0 1254 0 1254 0 1254 #> 7479 TCGA-WB-A817-01 0 1310 0 1310 0 1310 0 1310 #> 7480 TCGA-WB-A818-01 0 1288 0 1288 0 1288 0 1288 #> 7481 TCGA-WB-A819-01 0 1031 0 1031 0 1031 0 1031 #> 7482 TCGA-WB-A81A-01 0 735 0 735 0 735 0 735 #> 7483 TCGA-WB-A81D-01 0 1090 0 1090 0 1090 0 1090 #> 7484 TCGA-WB-A81E-01 0 1476 0 1476 1 887 1 887 #> 7485 TCGA-WB-A81F-01 0 1737 0 1737 0 1737 0 1737 #> 7486 TCGA-WB-A81G-01 0 1179 0 1179 0 1179 0 1179 #> 7487 TCGA-WB-A81H-01 0 1946 0 1946 0 1946 0 1946 #> 7488 TCGA-WB-A81I-01 0 679 0 679 0 679 0 679 #> 7489 TCGA-WB-A81J-01 0 741 0 741 0 741 0 741 #> 7490 TCGA-WB-A81K-01 0 1218 0 1218 0 1218 0 1218 #> 7491 TCGA-WB-A81M-01 0 1394 0 1394 0 1394 0 1394 #> 7492 TCGA-WB-A81N-01 0 1887 0 1887 0 1887 0 1887 #> 7493 TCGA-WB-A81P-01 0 395 0 395 0 395 0 395 #> 7494 TCGA-WB-A81Q-01 1 755 1 755 NA NA 1 755 #> 7495 TCGA-WB-A81R-01 0 49 0 49 0 49 0 49 #> 7496 TCGA-WB-A81S-01 0 723 0 723 0 723 0 723 #> 7497 TCGA-WB-A81T-01 0 776 0 776 0 776 0 776 #> 7498 TCGA-WB-A81V-01 0 2161 0 2161 0 2161 0 2161 #> 7499 TCGA-WB-A81W-01 0 2379 0 2379 0 2379 0 2379 #> 7500 TCGA-WB-A820-01 1 309 1 309 NA NA 1 309 #> 7501 TCGA-WB-A821-01 0 2832 0 2832 0 2832 0 2832 #> 7502 TCGA-WB-A822-01 0 3138 0 3138 NA NA 1 69 #> 7503 TCGA-XG-A823-01 0 614 0 614 0 614 1 190 #> 7504 TCGA-2A-A8VL-01 0 621 0 621 NA NA 0 621 #> 7505 TCGA-2A-A8VO-01 0 1701 0 1701 NA NA 0 1701 #> 7506 TCGA-2A-A8VT-01 0 1373 0 1373 NA NA 0 1373 #> 7507 TCGA-2A-A8VV-01 0 671 0 671 NA NA 0 671 #> 7508 TCGA-2A-A8VX-01 0 1378 0 1378 NA NA 0 1378 #> 7509 TCGA-2A-A8W1-01 0 112 0 112 NA NA 0 112 #> 7510 TCGA-2A-A8W3-01 0 863 0 863 NA NA 1 198 #> 7511 TCGA-2A-AAYF-01 0 1364 0 1364 0 1364 0 1364 #> 7512 TCGA-2A-AAYO-01 0 1272 0 1272 0 1272 0 1272 #> 7513 TCGA-2A-AAYU-01 0 615 0 615 NA NA 0 615 #> 7514 TCGA-4L-AA1F-01 0 350 0 350 0 350 0 350 #> 7515 TCGA-CH-5737-01 0 91 0 91 NA NA 0 91 #> 7516 TCGA-CH-5738-01 0 212 0 212 0 212 0 212 #> 7517 TCGA-CH-5739-01 0 671 0 671 0 671 0 671 #> 7518 TCGA-CH-5740-01 0 31 0 31 NA NA 0 31 #> 7519 TCGA-CH-5741-01 0 395 0 395 0 395 0 395 #> 7520 TCGA-CH-5743-01 0 425 0 425 0 425 1 425 #> 7521 TCGA-CH-5744-01 0 60 0 60 NA NA 0 60 #> 7522 TCGA-CH-5745-01 0 91 0 91 NA NA 0 91 #> 7523 TCGA-CH-5746-01 0 731 0 731 0 731 0 731 #> 7524 TCGA-CH-5748-01 0 31 0 31 NA NA 0 31 #> 7525 TCGA-CH-5750-01 0 396 0 396 0 396 0 396 #> 7526 TCGA-CH-5751-01 0 1065 0 1065 1 365 1 365 #> 7527 TCGA-CH-5752-01 0 943 0 943 0 943 0 943 #> 7528 TCGA-CH-5753-01 0 31 0 31 NA NA 0 31 #> 7529 TCGA-CH-5754-01 0 62 0 62 NA NA 0 62 #> 7530 TCGA-CH-5761-01 0 28 0 28 NA NA 0 28 #> 7531 TCGA-CH-5761-11 0 28 0 28 NA NA 0 28 #> 7532 TCGA-CH-5762-01 0 1339 0 1339 0 1339 0 1339 #> 7533 TCGA-CH-5763-01 0 365 0 365 0 365 0 365 #> 7534 TCGA-CH-5764-01 0 31 0 31 NA NA 0 31 #> 7535 TCGA-CH-5765-01 0 700 0 700 0 700 0 700 #> 7536 TCGA-CH-5766-01 0 31 0 31 NA NA 0 31 #> 7537 TCGA-CH-5767-01 0 458 0 458 0 458 0 458 #> 7538 TCGA-CH-5767-11 0 458 0 458 0 458 0 458 #> 7539 TCGA-CH-5768-01 0 731 0 731 0 731 0 731 #> 7540 TCGA-CH-5768-11 0 731 0 731 0 731 0 731 #> 7541 TCGA-CH-5769-01 0 62 0 62 NA NA 0 62 #> 7542 TCGA-CH-5769-11 0 62 0 62 NA NA 0 62 #> 7543 TCGA-CH-5771-01 0 396 0 396 0 396 0 396 #> 7544 TCGA-CH-5772-01 0 486 0 486 0 486 0 486 #> 7545 TCGA-CH-5788-01 0 821 0 821 NA NA 0 821 #> 7546 TCGA-CH-5789-01 0 304 0 304 0 304 0 304 #> 7547 TCGA-CH-5790-01 0 974 0 974 0 974 0 974 #> 7548 TCGA-CH-5791-01 0 1004 0 1004 0 1004 1 396 #> 7549 TCGA-CH-5792-01 0 91 0 91 NA NA 0 91 #> 7550 TCGA-CH-5794-01 0 882 0 882 0 882 0 882 #> 7551 TCGA-EJ-5494-01 0 1477 0 1477 0 1477 0 1477 #> 7552 TCGA-EJ-5495-01 0 1760 0 1760 0 1760 0 1760 #> 7553 TCGA-EJ-5496-01 0 595 0 595 0 595 0 595 #> 7554 TCGA-EJ-5497-01 0 405 0 405 0 405 0 405 #> 7555 TCGA-EJ-5498-01 0 1720 0 1720 0 1720 0 1720 #> 7556 TCGA-EJ-5499-01 0 1415 0 1415 0 1415 0 1415 #> 7557 TCGA-EJ-5501-01 0 1365 0 1365 0 1365 0 1365 #> 7558 TCGA-EJ-5502-01 0 1171 0 1171 0 1171 0 1171 #> 7559 TCGA-EJ-5503-01 0 1391 0 1391 0 1391 0 1391 #> 7560 TCGA-EJ-5504-01 0 1427 0 1427 NA NA 0 1427 #> 7561 TCGA-EJ-5505-01 0 922 0 922 0 922 0 922 #> 7562 TCGA-EJ-5506-01 0 1381 0 1381 0 1381 0 1381 #> 7563 TCGA-EJ-5507-01 0 1457 0 1457 0 1457 0 1457 #> 7564 TCGA-EJ-5508-01 0 1965 0 1965 0 1965 0 1965 #> 7565 TCGA-EJ-5509-01 0 1464 0 1464 0 1464 0 1464 #> 7566 TCGA-EJ-5510-01 0 1887 0 1887 0 1887 0 1887 #> 7567 TCGA-EJ-5511-01 0 1476 0 1476 0 1476 0 1476 #> 7568 TCGA-EJ-5512-01 0 1733 0 1733 0 1733 0 1733 #> 7569 TCGA-EJ-5514-01 0 1829 0 1829 0 1829 0 1829 #> 7570 TCGA-EJ-5515-01 0 1832 0 1832 0 1832 0 1832 #> 7571 TCGA-EJ-5516-01 0 1889 0 1889 0 1889 0 1889 #> 7572 TCGA-EJ-5517-01 0 1889 0 1889 0 1889 0 1889 #> 7573 TCGA-EJ-5518-01 0 2118 0 2118 NA NA 1 2104 #> 7574 TCGA-EJ-5519-01 0 1962 0 1962 0 1962 0 1962 #> 7575 TCGA-EJ-5521-01 0 2279 0 2279 0 2279 0 2279 #> 7576 TCGA-EJ-5522-01 0 2079 0 2079 0 2079 0 2079 #> 7577 TCGA-EJ-5524-01 0 1882 0 1882 NA NA 1 265 #> 7578 TCGA-EJ-5525-01 0 1115 0 1115 NA NA 1 546 #> 7579 TCGA-EJ-5526-01 0 1909 0 1909 NA NA 1 537 #> 7580 TCGA-EJ-5527-01 0 1778 0 1778 0 1778 0 1778 #> 7581 TCGA-EJ-5530-01 0 1832 0 1832 0 1832 0 1832 #> 7582 TCGA-EJ-5531-01 0 1273 0 1273 0 1273 0 1273 #> 7583 TCGA-EJ-5532-01 0 1828 0 1828 0 1828 0 1828 #> 7584 TCGA-EJ-5542-01 0 1513 0 1513 0 1513 0 1513 #> 7585 TCGA-EJ-7115-01 0 2687 0 2687 0 2687 0 2687 #> 7586 TCGA-EJ-7115-11 0 2687 0 2687 0 2687 0 2687 #> 7587 TCGA-EJ-7123-01 0 2572 0 2572 0 2572 0 2572 #> 7588 TCGA-EJ-7123-11 0 2572 0 2572 0 2572 0 2572 #> 7589 TCGA-EJ-7125-01 0 2850 0 2850 0 2850 0 2850 #> 7590 TCGA-EJ-7125-11 0 2850 0 2850 0 2850 0 2850 #> 7591 TCGA-EJ-7218-01 0 2542 0 2542 0 2542 0 2542 #> 7592 TCGA-EJ-7312-01 0 1099 0 1099 0 1099 0 1099 #> 7593 TCGA-EJ-7314-01 0 1150 0 1150 0 1150 0 1150 #> 7594 TCGA-EJ-7314-11 0 1150 0 1150 0 1150 0 1150 #> 7595 TCGA-EJ-7315-01 0 1008 0 1008 0 1008 0 1008 #> 7596 TCGA-EJ-7315-11 0 1008 0 1008 0 1008 0 1008 #> 7597 TCGA-EJ-7317-01 0 771 0 771 0 771 0 771 #> 7598 TCGA-EJ-7317-11 0 771 0 771 0 771 0 771 #> 7599 TCGA-EJ-7318-01 0 1029 0 1029 NA NA 1 380 #> 7600 TCGA-EJ-7321-01 0 824 0 824 0 824 0 824 #> 7601 TCGA-EJ-7321-11 0 824 0 824 0 824 0 824 #> 7602 TCGA-EJ-7325-01 0 1070 0 1070 0 1070 0 1070 #> 7603 TCGA-EJ-7327-01 0 923 0 923 0 923 0 923 #> 7604 TCGA-EJ-7327-11 0 923 0 923 0 923 0 923 #> 7605 TCGA-EJ-7328-01 0 842 0 842 0 842 0 842 #> 7606 TCGA-EJ-7328-11 0 842 0 842 0 842 0 842 #> 7607 TCGA-EJ-7330-01 0 191 0 191 NA NA 0 191 #> 7608 TCGA-EJ-7330-11 0 191 0 191 NA NA 0 191 #> 7609 TCGA-EJ-7331-01 0 742 0 742 0 742 0 742 #> 7610 TCGA-EJ-7331-11 0 742 0 742 0 742 0 742 #> 7611 TCGA-EJ-7781-01 0 1073 0 1073 0 1073 0 1073 #> 7612 TCGA-EJ-7781-11 0 1073 0 1073 0 1073 0 1073 #> 7613 TCGA-EJ-7782-01 0 1167 0 1167 0 1167 0 1167 #> 7614 TCGA-EJ-7782-11 0 1167 0 1167 0 1167 0 1167 #> 7615 TCGA-EJ-7783-01 0 787 0 787 0 787 0 787 #> 7616 TCGA-EJ-7783-11 0 787 0 787 0 787 0 787 #> 7617 TCGA-EJ-7784-01 0 781 0 781 0 781 0 781 #> 7618 TCGA-EJ-7784-11 0 781 0 781 0 781 0 781 #> 7619 TCGA-EJ-7785-01 0 1177 0 1177 0 1177 0 1177 #> 7620 TCGA-EJ-7785-11 0 1177 0 1177 0 1177 0 1177 #> 7621 TCGA-EJ-7786-01 0 1096 0 1096 0 1096 0 1096 #> 7622 TCGA-EJ-7786-11 0 1096 0 1096 0 1096 0 1096 #> 7623 TCGA-EJ-7788-01 0 859 0 859 0 859 0 859 #> 7624 TCGA-EJ-7789-01 0 1105 0 1105 0 1105 0 1105 #> 7625 TCGA-EJ-7789-11 0 1105 0 1105 0 1105 0 1105 #> 7626 TCGA-EJ-7791-01 0 1118 0 1118 0 1118 0 1118 #> 7627 TCGA-EJ-7792-01 0 1396 0 1396 0 1396 0 1396 #> 7628 TCGA-EJ-7792-11 0 1396 0 1396 0 1396 0 1396 #> 7629 TCGA-EJ-7793-01 0 114 0 114 0 114 0 114 #> 7630 TCGA-EJ-7793-11 0 114 0 114 0 114 0 114 #> 7631 TCGA-EJ-7794-01 0 1306 0 1306 0 1306 0 1306 #> 7632 TCGA-EJ-7794-11 0 1306 0 1306 0 1306 0 1306 #> 7633 TCGA-EJ-7797-01 0 983 0 983 0 983 0 983 #> 7634 TCGA-EJ-7797-11 0 983 0 983 0 983 0 983 #> 7635 TCGA-EJ-8468-01 0 2347 0 2347 0 2347 0 2347 #> 7636 TCGA-EJ-8470-01 0 1159 0 1159 0 1159 0 1159 #> 7637 TCGA-EJ-8472-01 0 756 0 756 NA NA 1 196 #> 7638 TCGA-EJ-8474-01 0 766 0 766 0 766 0 766 #> 7639 TCGA-EJ-A46B-01 0 657 0 657 0 657 0 657 #> 7640 TCGA-EJ-A46D-01 0 626 0 626 0 626 0 626 #> 7641 TCGA-EJ-A46E-01 0 524 0 524 0 524 0 524 #> 7642 TCGA-EJ-A46F-01 0 783 0 783 NA NA 1 215 #> 7643 TCGA-EJ-A46G-01 0 668 0 668 0 668 0 668 #> 7644 TCGA-EJ-A46H-01 0 724 0 724 0 724 0 724 #> 7645 TCGA-EJ-A46I-01 0 668 0 668 0 668 0 668 #> 7646 TCGA-EJ-A65B-01 0 710 0 710 0 710 0 710 #> 7647 TCGA-EJ-A65D-01 0 393 0 393 0 393 0 393 #> 7648 TCGA-EJ-A65E-01 0 417 0 417 0 417 0 417 #> 7649 TCGA-EJ-A65F-01 0 560 0 560 NA NA 1 75 #> 7650 TCGA-EJ-A65G-01 0 666 0 666 0 666 0 666 #> 7651 TCGA-EJ-A65J-01 0 451 0 451 0 451 0 451 #> 7652 TCGA-EJ-A65M-01 0 230 0 230 0 230 0 230 #> 7653 TCGA-EJ-A6RA-01 0 353 0 353 NA NA 1 353 #> 7654 TCGA-EJ-A6RC-01 0 873 0 873 0 873 0 873 #> 7655 TCGA-EJ-A7NF-01 0 250 0 250 0 250 0 250 #> 7656 TCGA-EJ-A7NG-01 0 432 0 432 0 432 0 432 #> 7657 TCGA-EJ-A7NH-01 0 474 0 474 0 474 0 474 #> 7658 TCGA-EJ-A7NJ-01 0 197 0 197 0 197 0 197 #> 7659 TCGA-EJ-A7NK-01 0 476 0 476 0 476 0 476 #> 7660 TCGA-EJ-A7NM-01 0 128 0 128 0 128 0 128 #> 7661 TCGA-EJ-A7NN-01 0 197 0 197 1 197 1 197 #> 7662 TCGA-EJ-A8FN-01 0 329 0 329 0 329 0 329 #> 7663 TCGA-EJ-A8FO-01 0 282 0 282 0 282 0 282 #> 7664 TCGA-EJ-A8FO-11 0 282 0 282 0 282 0 282 #> 7665 TCGA-EJ-A8FP-01 0 299 0 299 1 117 1 117 #> 7666 TCGA-EJ-A8FS-01 0 266 0 266 1 216 1 216 #> 7667 TCGA-EJ-A8FU-01 0 138 0 138 0 138 0 138 #> 7668 TCGA-EJ-AB20-01 0 131 0 131 0 131 0 131 #> 7669 TCGA-EJ-AB27-01 0 145 0 145 0 145 0 145 #> 7670 TCGA-FC-7708-01 0 864 0 864 0 864 0 864 #> 7671 TCGA-FC-7961-01 0 469 0 469 0 469 0 469 #> 7672 TCGA-FC-A4JI-01 0 877 0 877 0 877 0 877 #> 7673 TCGA-FC-A5OB-01 0 680 0 680 NA NA 0 680 #> 7674 TCGA-FC-A66V-01 0 524 0 524 0 524 0 524 #> 7675 TCGA-FC-A6HD-01 0 789 0 789 0 789 0 789 #> 7676 TCGA-FC-A8O0-01 0 616 0 616 0 616 0 616 #> 7677 TCGA-G9-6329-01 0 1266 0 1266 0 1266 0 1266 #> 7678 TCGA-G9-6332-01 0 2657 0 2657 1 1180 1 1180 #> 7679 TCGA-G9-6333-01 0 2465 0 2465 0 2465 0 2465 #> 7680 TCGA-G9-6333-11 0 2465 0 2465 0 2465 0 2465 #> 7681 TCGA-G9-6336-01 0 2068 0 2068 0 2068 0 2068 #> 7682 TCGA-G9-6338-01 0 2028 0 2028 0 2028 0 2028 #> 7683 TCGA-G9-6339-01 0 2551 0 2551 1 1634 1 1634 #> 7684 TCGA-G9-6342-01 0 1696 0 1696 0 1696 0 1696 #> 7685 TCGA-G9-6342-11 0 1696 0 1696 0 1696 0 1696 #> 7686 TCGA-G9-6343-01 0 2450 0 2450 0 2450 0 2450 #> 7687 TCGA-G9-6347-01 0 2089 0 2089 0 2089 0 2089 #> 7688 TCGA-G9-6348-01 0 1515 0 1515 0 1515 0 1515 #> 7689 TCGA-G9-6348-11 0 1515 0 1515 0 1515 0 1515 #> 7690 TCGA-G9-6351-01 0 2048 0 2048 0 2048 0 2048 #> 7691 TCGA-G9-6351-11 0 2048 0 2048 0 2048 0 2048 #> 7692 TCGA-G9-6353-01 0 1542 0 1542 0 1542 0 1542 #> 7693 TCGA-G9-6354-01 0 2066 0 2066 0 2066 0 2066 #> 7694 TCGA-G9-6356-01 0 1434 0 1434 0 1434 0 1434 #> 7695 TCGA-G9-6356-11 0 1434 0 1434 0 1434 0 1434 #> 7696 TCGA-G9-6361-01 0 1415 0 1415 0 1415 0 1415 #> 7697 TCGA-G9-6362-01 0 1443 0 1443 NA NA 0 1443 #> 7698 TCGA-G9-6362-11 0 1443 0 1443 NA NA 0 1443 #> 7699 TCGA-G9-6363-01 0 1378 0 1378 0 1378 0 1378 #> 7700 TCGA-G9-6363-11 0 1378 0 1378 0 1378 0 1378 #> 7701 TCGA-G9-6364-01 0 1198 0 1198 0 1198 0 1198 #> 7702 TCGA-G9-6365-01 0 1363 0 1363 0 1363 0 1363 #> 7703 TCGA-G9-6365-11 0 1363 0 1363 0 1363 0 1363 #> 7704 TCGA-G9-6366-01 0 1947 0 1947 0 1947 0 1947 #> 7705 TCGA-G9-6367-01 0 1222 0 1222 NA NA 0 1222 #> 7706 TCGA-G9-6369-01 0 1215 0 1215 0 1215 0 1215 #> 7707 TCGA-G9-6370-01 0 1156 0 1156 0 1156 0 1156 #> 7708 TCGA-G9-6371-01 0 1226 0 1226 0 1226 0 1226 #> 7709 TCGA-G9-6373-01 0 811 0 811 0 811 0 811 #> 7710 TCGA-G9-6377-01 0 958 0 958 0 958 0 958 #> 7711 TCGA-G9-6378-01 0 1155 0 1155 0 1155 0 1155 #> 7712 TCGA-G9-6379-01 0 1778 0 1778 0 1778 0 1778 #> 7713 TCGA-G9-6384-01 0 765 0 765 0 765 0 765 #> 7714 TCGA-G9-6384-11 0 765 0 765 0 765 0 765 #> 7715 TCGA-G9-6385-01 0 830 0 830 0 830 0 830 #> 7716 TCGA-G9-6494-01 0 1771 0 1771 NA NA 0 1771 #> 7717 TCGA-G9-6496-01 0 1726 0 1726 0 1726 0 1726 #> 7718 TCGA-G9-6496-11 0 1726 0 1726 0 1726 0 1726 #> 7719 TCGA-G9-6498-01 0 1952 0 1952 1 1342 1 1342 #> 7720 TCGA-G9-6499-01 0 1543 0 1543 0 1543 0 1543 #> 7721 TCGA-G9-6499-11 0 1543 0 1543 0 1543 0 1543 #> 7722 TCGA-G9-7509-01 0 1610 0 1610 0 1610 0 1610 #> 7723 TCGA-G9-7510-01 0 1185 0 1185 0 1185 0 1185 #> 7724 TCGA-G9-7519-01 0 849 0 849 0 849 0 849 #> 7725 TCGA-G9-7521-01 0 942 0 942 NA NA 0 942 #> 7726 TCGA-G9-7522-01 0 1078 0 1078 0 1078 0 1078 #> 7727 TCGA-G9-7523-01 0 857 0 857 0 857 0 857 #> 7728 TCGA-G9-7525-01 0 994 0 994 0 994 0 994 #> 7729 TCGA-G9-A9S0-01 1 791 1 791 NA NA 1 423 #> 7730 TCGA-G9-A9S4-01 0 906 0 906 0 906 0 906 #> 7731 TCGA-G9-A9S7-01 0 728 0 728 NA NA 0 728 #> 7732 TCGA-H9-7775-01 0 185 0 185 0 185 0 185 #> 7733 TCGA-H9-A6BX-01 0 941 0 941 0 941 0 941 #> 7734 TCGA-H9-A6BY-01 0 112 0 112 NA NA 0 112 #> 7735 TCGA-HC-7075-01 0 601 0 601 0 601 0 601 #> 7736 TCGA-HC-7077-01 0 2115 0 2115 0 2115 0 2115 #> 7737 TCGA-HC-7078-01 0 1985 0 1985 0 1985 0 1985 #> 7738 TCGA-HC-7079-01 0 1184 0 1184 NA NA 1 380 #> 7739 TCGA-HC-7080-01 0 1106 0 1106 0 1106 1 894 #> 7740 TCGA-HC-7081-01 0 1136 0 1136 NA NA 0 1136 #> 7741 TCGA-HC-7209-01 0 440 0 440 0 440 0 440 #> 7742 TCGA-HC-7210-01 0 868 0 868 0 868 0 868 #> 7743 TCGA-HC-7211-01 0 1221 0 1221 0 1221 0 1221 #> 7744 TCGA-HC-7211-11 0 1221 0 1221 0 1221 0 1221 #> 7745 TCGA-HC-7212-01 0 870 0 870 0 870 0 870 #> 7746 TCGA-HC-7213-01 0 1219 0 1219 NA NA 1 170 #> 7747 TCGA-HC-7230-01 0 1001 0 1001 0 1001 0 1001 #> 7748 TCGA-HC-7231-01 0 939 0 939 0 939 0 939 #> 7749 TCGA-HC-7232-01 0 1161 0 1161 1 766 1 766 #> 7750 TCGA-HC-7233-01 0 1355 0 1355 0 1355 0 1355 #> 7751 TCGA-HC-7736-01 0 1103 0 1103 0 1103 0 1103 #> 7752 TCGA-HC-7737-01 0 1090 0 1090 0 1090 0 1090 #> 7753 TCGA-HC-7737-11 0 1090 0 1090 0 1090 0 1090 #> 7754 TCGA-HC-7738-01 0 964 0 964 NA NA 1 420 #> 7755 TCGA-HC-7738-11 0 964 0 964 NA NA 1 420 #> 7756 TCGA-HC-7740-01 0 717 0 717 0 717 0 717 #> 7757 TCGA-HC-7740-11 0 717 0 717 0 717 0 717 #> 7758 TCGA-HC-7742-01 0 938 0 938 NA NA 0 938 #> 7759 TCGA-HC-7742-11 0 938 0 938 NA NA 0 938 #> 7760 TCGA-HC-7744-01 0 531 0 531 0 531 0 531 #> 7761 TCGA-HC-7745-01 0 721 0 721 0 721 0 721 #> 7762 TCGA-HC-7745-11 0 721 0 721 0 721 0 721 #> 7763 TCGA-HC-7747-01 0 748 0 748 0 748 0 748 #> 7764 TCGA-HC-7747-11 0 748 0 748 0 748 0 748 #> 7765 TCGA-HC-7748-01 0 792 0 792 0 792 0 792 #> 7766 TCGA-HC-7749-01 0 724 0 724 0 724 0 724 #> 7767 TCGA-HC-7750-01 0 522 0 522 0 522 0 522 #> 7768 TCGA-HC-7752-01 0 782 0 782 0 782 0 782 #> 7769 TCGA-HC-7752-11 0 782 0 782 0 782 0 782 #> 7770 TCGA-HC-7817-01 0 928 0 928 0 928 0 928 #> 7771 TCGA-HC-7818-01 0 938 0 938 0 938 0 938 #> 7772 TCGA-HC-7819-01 0 543 0 543 0 543 0 543 #> 7773 TCGA-HC-7819-11 0 543 0 543 0 543 0 543 #> 7774 TCGA-HC-7820-01 0 747 0 747 0 747 0 747 #> 7775 TCGA-HC-7821-01 0 956 0 956 0 956 0 956 #> 7776 TCGA-HC-8213-01 0 589 0 589 0 589 0 589 #> 7777 TCGA-HC-8216-01 0 682 0 682 0 682 0 682 #> 7778 TCGA-HC-8256-01 0 860 0 860 0 860 0 860 #> 7779 TCGA-HC-8257-01 0 726 0 726 0 726 0 726 #> 7780 TCGA-HC-8258-01 0 847 0 847 0 847 0 847 #> 7781 TCGA-HC-8258-11 0 847 0 847 0 847 0 847 #> 7782 TCGA-HC-8259-01 0 924 0 924 0 924 0 924 #> 7783 TCGA-HC-8259-11 0 924 0 924 0 924 0 924 #> 7784 TCGA-HC-8260-01 0 686 0 686 0 686 0 686 #> 7785 TCGA-HC-8260-11 0 686 0 686 0 686 0 686 #> 7786 TCGA-HC-8261-01 0 546 0 546 0 546 0 546 #> 7787 TCGA-HC-8262-01 0 679 0 679 0 679 0 679 #> 7788 TCGA-HC-8262-11 0 679 0 679 0 679 0 679 #> 7789 TCGA-HC-8264-01 0 48 0 48 NA NA 0 48 #> 7790 TCGA-HC-8265-01 0 483 0 483 0 483 0 483 #> 7791 TCGA-HC-8266-01 0 473 0 473 NA NA 0 473 #> 7792 TCGA-HC-A48F-01 0 680 0 680 0 680 0 680 #> 7793 TCGA-HC-A4ZV-01 0 23 0 23 NA NA 0 23 #> 7794 TCGA-HC-A631-01 0 54 0 54 NA NA 0 54 #> 7795 TCGA-HC-A632-01 0 61 0 61 NA NA 0 61 #> 7796 TCGA-HC-A6AL-01 0 67 0 67 NA NA 0 67 #> 7797 TCGA-HC-A6AN-01 0 49 0 49 NA NA 0 49 #> 7798 TCGA-HC-A6AO-01 0 530 0 530 0 530 0 530 #> 7799 TCGA-HC-A6AP-01 0 71 0 71 NA NA 0 71 #> 7800 TCGA-HC-A6AQ-01 0 106 0 106 NA NA 0 106 #> 7801 TCGA-HC-A6AS-01 0 44 0 44 NA NA 0 44 #> 7802 TCGA-HC-A6HX-01 0 38 0 38 NA NA 0 38 #> 7803 TCGA-HC-A6HY-01 0 134 0 134 NA NA 0 134 #> 7804 TCGA-HC-A76W-01 0 213 0 213 NA NA 0 213 #> 7805 TCGA-HC-A76X-01 0 150 0 150 NA NA 0 150 #> 7806 TCGA-HC-A8CY-01 0 290 0 290 NA NA 0 290 #> 7807 TCGA-HC-A8D0-01 0 775 0 775 0 775 0 775 #> 7808 TCGA-HC-A8D1-01 0 573 0 573 0 573 0 573 #> 7809 TCGA-HC-A9TE-01 0 587 0 587 NA NA 1 216 #> 7810 TCGA-HC-A9TH-01 0 844 0 844 NA NA 1 351 #> 7811 TCGA-HI-7168-01 0 3323 0 3323 NA NA 1 2505 #> 7812 TCGA-HI-7169-01 0 2684 0 2684 0 2684 0 2684 #> 7813 TCGA-HI-7170-01 0 2522 0 2522 0 2522 0 2522 #> 7814 TCGA-HI-7171-01 1 1329 1 1329 NA NA 1 1329 #> 7815 TCGA-J4-8198-01 0 614 0 614 0 614 0 614 #> 7816 TCGA-J4-8200-01 0 1218 0 1218 0 1218 0 1218 #> 7817 TCGA-J4-A67K-01 0 1004 0 1004 0 1004 0 1004 #> 7818 TCGA-J4-A67L-01 0 770 0 770 0 770 0 770 #> 7819 TCGA-J4-A67M-01 0 941 0 941 0 941 0 941 #> 7820 TCGA-J4-A67N-01 0 937 0 937 NA NA 1 442 #> 7821 TCGA-J4-A67O-01 0 839 0 839 0 839 0 839 #> 7822 TCGA-J4-A67Q-01 0 975 0 975 0 975 0 975 #> 7823 TCGA-J4-A67R-01 0 910 0 910 0 910 0 910 #> 7824 TCGA-J4-A67S-01 0 833 0 833 1 708 1 708 #> 7825 TCGA-J4-A67T-01 0 183 0 183 0 183 0 183 #> 7826 TCGA-J4-A6G1-01 0 769 0 769 0 769 0 769 #> 7827 TCGA-J4-A6G3-01 0 849 0 849 NA NA 1 618 #> 7828 TCGA-J4-A6M7-01 0 512 0 512 0 512 0 512 #> 7829 TCGA-J4-A83I-01 0 685 0 685 0 685 0 685 #> 7830 TCGA-J4-A83J-01 0 696 0 696 0 696 0 696 #> 7831 TCGA-J4-A83J-11 0 696 0 696 0 696 0 696 #> 7832 TCGA-J4-A83K-01 0 328 0 328 0 328 0 328 #> 7833 TCGA-J4-A83L-01 0 720 0 720 0 720 0 720 #> 7834 TCGA-J4-A83M-01 0 543 0 543 1 521 1 521 #> 7835 TCGA-J4-A83N-01 0 992 0 992 0 992 1 433 #> 7836 TCGA-J4-AATV-01 0 553 0 553 NA NA 0 553 #> 7837 TCGA-J4-AATZ-01 0 412 0 412 1 79 1 79 #> 7838 TCGA-J4-AAU2-01 0 825 0 825 0 825 0 825 #> 7839 TCGA-J9-A52B-01 0 422 0 422 1 57 1 57 #> 7840 TCGA-J9-A52C-01 0 178 0 178 NA NA 0 178 #> 7841 TCGA-J9-A52D-01 0 212 0 212 NA NA 0 212 #> 7842 TCGA-J9-A52E-01 0 323 0 323 NA NA 0 323 #> 7843 TCGA-J9-A8CK-01 0 321 0 321 NA NA 0 321 #> 7844 TCGA-J9-A8CL-01 0 405 0 405 NA NA 1 132 #> 7845 TCGA-J9-A8CM-01 0 463 0 463 NA NA 1 344 #> 7846 TCGA-J9-A8CN-01 0 1237 0 1237 0 1237 0 1237 #> 7847 TCGA-J9-A8CP-01 0 386 0 386 0 386 0 386 #> 7848 TCGA-KC-A4BL-01 0 934 0 934 NA NA 1 193 #> 7849 TCGA-KC-A4BN-01 0 1815 0 1815 0 1815 0 1815 #> 7850 TCGA-KC-A4BR-01 0 1349 0 1349 1 1022 1 1022 #> 7851 TCGA-KC-A4BV-01 0 1328 0 1328 1 1328 1 1328 #> 7852 TCGA-KC-A7F3-01 0 665 0 665 0 665 0 665 #> 7853 TCGA-KC-A7F5-01 0 91 0 91 0 91 0 91 #> 7854 TCGA-KC-A7F6-01 0 263 0 263 0 263 0 263 #> 7855 TCGA-KC-A7FA-01 0 598 0 598 0 598 0 598 #> 7856 TCGA-KC-A7FD-01 0 270 0 270 0 270 0 270 #> 7857 TCGA-KC-A7FE-01 0 352 0 352 0 352 0 352 #> 7858 TCGA-KK-A59V-01 0 3440 0 3440 0 3440 0 3440 #> 7859 TCGA-KK-A59X-01 0 2535 0 2535 NA NA 1 2233 #> 7860 TCGA-KK-A59Y-01 0 1968 0 1968 0 1968 0 1968 #> 7861 TCGA-KK-A59Z-01 0 2628 0 2628 NA NA 0 2628 #> 7862 TCGA-KK-A5A1-01 1 2469 NA 2469 NA NA 1 203 #> 7863 TCGA-KK-A6DY-01 0 4295 0 4295 NA NA 0 4295 #> 7864 TCGA-KK-A6E0-01 0 1483 0 1483 1 941 1 941 #> 7865 TCGA-KK-A6E1-01 0 2198 0 2198 0 2198 0 2198 #> 7866 TCGA-KK-A6E2-01 0 5024 0 5024 0 5024 0 5024 #> 7867 TCGA-KK-A6E3-01 0 2056 0 2056 NA NA 0 2056 #> 7868 TCGA-KK-A6E4-01 1 3502 0 3502 0 3502 0 3502 #> 7869 TCGA-KK-A6E5-01 0 2073 0 2073 0 2073 0 2073 #> 7870 TCGA-KK-A6E6-01 0 3447 0 3447 NA NA 0 3447 #> 7871 TCGA-KK-A6E7-01 0 2760 0 2760 NA NA 1 925 #> 7872 TCGA-KK-A6E8-01 0 1770 0 1770 NA NA 0 1770 #> 7873 TCGA-KK-A7AP-01 0 196 0 196 NA NA 0 196 #> 7874 TCGA-KK-A7AQ-01 0 1610 0 1610 1 1217 1 1217 #> 7875 TCGA-KK-A7AU-01 0 1775 0 1775 NA NA 1 207 #> 7876 TCGA-KK-A7AV-01 0 822 0 822 0 822 0 822 #> 7877 TCGA-KK-A7AW-01 0 1054 0 1054 NA NA 0 1054 #> 7878 TCGA-KK-A7AY-01 0 1754 0 1754 1 1124 1 1124 #> 7879 TCGA-KK-A7AZ-01 0 1519 0 1519 NA NA 0 1519 #> 7880 TCGA-KK-A7B0-01 0 1329 0 1329 NA NA 1 606 #> 7881 TCGA-KK-A7B1-01 0 1063 0 1063 0 1063 0 1063 #> 7882 TCGA-KK-A7B2-01 0 1099 0 1099 NA NA 1 692 #> 7883 TCGA-KK-A7B3-01 0 899 0 899 1 294 1 294 #> 7884 TCGA-KK-A7B4-01 0 987 0 987 NA NA 1 637 #> 7885 TCGA-KK-A8I4-01 0 2259 0 2259 NA NA 1 1162 #> 7886 TCGA-KK-A8I5-01 0 3096 0 3096 0 3096 0 3096 #> 7887 TCGA-KK-A8I6-01 0 668 0 668 0 668 0 668 #> 7888 TCGA-KK-A8I7-01 0 2002 0 2002 NA NA 1 1088 #> 7889 TCGA-KK-A8I8-01 0 967 0 967 0 967 0 967 #> 7890 TCGA-KK-A8I9-01 0 1001 0 1001 1 940 1 940 #> 7891 TCGA-KK-A8IA-01 0 1931 0 1931 NA NA 0 1931 #> 7892 TCGA-KK-A8IB-01 0 83 0 83 NA NA 0 83 #> 7893 TCGA-KK-A8IC-01 0 2051 0 2051 NA NA 1 1060 #> 7894 TCGA-KK-A8ID-01 0 2107 0 2107 0 2107 0 2107 #> 7895 TCGA-KK-A8IF-01 0 804 0 804 NA NA 1 648 #> 7896 TCGA-KK-A8IG-01 0 2505 0 2505 0 2505 0 2505 #> 7897 TCGA-KK-A8IH-01 0 2013 0 2013 0 2013 0 2013 #> 7898 TCGA-KK-A8II-01 1 3467 1 3467 NA NA 1 626 #> 7899 TCGA-KK-A8IJ-01 0 1559 0 1559 NA NA 1 307 #> 7900 TCGA-KK-A8IK-01 0 2052 0 2052 0 2052 0 2052 #> 7901 TCGA-KK-A8IL-01 1 628 NA 628 NA NA 0 628 #> 7902 TCGA-KK-A8IM-01 0 1915 0 1915 0 1915 0 1915 #> 7903 TCGA-M7-A71Y-01 0 493 0 493 0 493 0 493 #> 7904 TCGA-M7-A71Z-01 0 643 0 643 0 643 0 643 #> 7905 TCGA-M7-A720-01 0 384 0 384 0 384 0 384 #> 7906 TCGA-M7-A721-01 0 400 0 400 0 400 0 400 #> 7907 TCGA-M7-A722-01 0 1060 0 1060 NA NA 1 559 #> 7908 TCGA-M7-A723-01 0 763 0 763 0 763 0 763 #> 7909 TCGA-M7-A724-01 0 889 0 889 NA NA 0 889 #> 7910 TCGA-M7-A725-01 0 573 0 573 0 573 0 573 #> 7911 TCGA-MG-AAMC-01 0 173 0 173 0 173 0 173 #> 7912 TCGA-QU-A6IL-01 0 97 0 97 0 97 0 97 #> 7913 TCGA-QU-A6IM-01 0 1247 0 1247 0 1247 0 1247 #> 7914 TCGA-QU-A6IN-01 0 4264 0 4264 0 4264 0 4264 #> 7915 TCGA-QU-A6IO-01 0 3716 0 3716 0 3716 0 3716 #> 7916 TCGA-QU-A6IP-01 0 2620 0 2620 0 2620 0 2620 #> 7917 TCGA-SU-A7E7-01 0 551 0 551 0 551 0 551 #> 7918 TCGA-TK-A8OK-01 0 27 0 27 NA NA 0 27 #> 7919 TCGA-TP-A8TT-01 0 526 0 526 NA NA 0 526 #> 7920 TCGA-TP-A8TV-01 0 610 0 610 0 610 0 610 #> 7921 TCGA-V1-A8MF-01 0 1449 0 1449 0 1449 0 1449 #> 7922 TCGA-V1-A8MG-01 0 857 0 857 0 857 0 857 #> 7923 TCGA-V1-A8MJ-01 0 1791 0 1791 NA NA 0 1791 #> 7924 TCGA-V1-A8MK-01 0 508 0 508 0 508 0 508 #> 7925 TCGA-V1-A8ML-01 0 448 0 448 0 448 0 448 #> 7926 TCGA-V1-A8MM-01 0 1195 0 1195 1 990 1 990 #> 7927 TCGA-V1-A8MU-01 0 1876 0 1876 NA NA 0 1876 #> 7928 TCGA-V1-A8WL-01 0 1948 0 1948 0 1948 0 1948 #> 7929 TCGA-V1-A8WN-01 0 924 0 924 0 924 0 924 #> 7930 TCGA-V1-A8WS-01 0 474 0 474 NA NA 0 474 #> 7931 TCGA-V1-A8WV-01 0 686 0 686 0 686 0 686 #> 7932 TCGA-V1-A8WW-01 0 1078 0 1078 0 1078 0 1078 #> 7933 TCGA-V1-A8X3-01 0 202 0 202 0 202 0 202 #> 7934 TCGA-V1-A9O5-06 0 1932 0 1932 1 124 1 124 #> 7935 TCGA-V1-A9O5-01 0 1932 0 1932 1 124 1 124 #> 7936 TCGA-V1-A9O7-01 0 2499 0 2499 NA NA 1 819 #> 7937 TCGA-V1-A9O9-01 0 2870 0 2870 0 2870 0 2870 #> 7938 TCGA-V1-A9OA-01 0 636 0 636 0 636 0 636 #> 7939 TCGA-V1-A9OF-01 0 1184 0 1184 0 1184 0 1184 #> 7940 TCGA-V1-A9OH-01 0 2403 0 2403 0 2403 0 2403 #> 7941 TCGA-V1-A9OL-01 0 1913 0 1913 1 105 1 105 #> 7942 TCGA-V1-A9OQ-01 0 371 0 371 0 371 0 371 #> 7943 TCGA-V1-A9OT-01 0 476 0 476 NA NA 1 292 #> 7944 TCGA-V1-A9OX-01 0 1134 0 1134 NA NA 0 1134 #> 7945 TCGA-V1-A9OY-01 0 1067 0 1067 0 1067 0 1067 #> 7946 TCGA-V1-A9Z7-01 0 874 0 874 0 874 0 874 #> 7947 TCGA-V1-A9Z8-01 0 827 0 827 0 827 0 827 #> 7948 TCGA-V1-A9Z9-01 0 540 0 540 0 540 0 540 #> 7949 TCGA-V1-A9ZG-01 0 1517 0 1517 0 1517 0 1517 #> 7950 TCGA-V1-A9ZI-01 0 1640 0 1640 NA NA 0 1640 #> 7951 TCGA-V1-A9ZK-01 0 1383 0 1383 0 1383 0 1383 #> 7952 TCGA-V1-A9ZR-01 0 1361 0 1361 0 1361 0 1361 #> 7953 TCGA-VN-A88I-01 0 269 0 269 NA NA 0 269 #> 7954 TCGA-VN-A88K-01 0 776 0 776 0 776 0 776 #> 7955 TCGA-VN-A88L-01 0 746 0 746 0 746 0 746 #> 7956 TCGA-VN-A88M-01 0 189 0 189 0 189 0 189 #> 7957 TCGA-VN-A88N-01 0 766 0 766 0 766 0 766 #> 7958 TCGA-VN-A88O-01 0 481 0 481 0 481 0 481 #> 7959 TCGA-VN-A88P-01 0 1260 0 1260 0 1260 0 1260 #> 7960 TCGA-VN-A88Q-01 0 1366 0 1366 0 1366 0 1366 #> 7961 TCGA-VN-A88R-01 0 784 0 784 NA NA 1 512 #> 7962 TCGA-VN-A943-01 0 496 0 496 0 496 0 496 #> 7963 TCGA-VP-A872-01 0 3631 0 3631 0 3631 0 3631 #> 7964 TCGA-VP-A875-01 0 2309 0 2309 0 2309 0 2309 #> 7965 TCGA-VP-A876-01 0 3333 0 3333 0 3333 0 3333 #> 7966 TCGA-VP-A878-01 0 3130 0 3130 NA NA 1 98 #> 7967 TCGA-VP-A879-01 1 728 0 728 0 728 0 728 #> 7968 TCGA-VP-A87B-01 0 2722 0 2722 0 2722 1 2473 #> 7969 TCGA-VP-A87C-01 0 1690 0 1690 0 1690 0 1690 #> 7970 TCGA-VP-A87D-01 0 1853 0 1853 1 1194 1 1194 #> 7971 TCGA-VP-A87E-01 0 2037 0 2037 0 2037 0 2037 #> 7972 TCGA-VP-A87H-01 0 663 0 663 0 663 0 663 #> 7973 TCGA-VP-A87J-01 0 1774 0 1774 0 1774 0 1774 #> 7974 TCGA-VP-A87K-01 0 1306 0 1306 1 533 1 533 #> 7975 TCGA-VP-AA1N-01 0 1365 0 1365 0 1365 0 1365 #> 7976 TCGA-WW-A8ZI-01 0 449 0 449 0 449 0 449 #> 7977 TCGA-X4-A8KQ-01 0 1383 0 1383 NA NA 0 1383 #> 7978 TCGA-X4-A8KS-01 0 979 0 979 NA NA 0 979 #> 7979 TCGA-XA-A8JR-01 0 376 0 376 0 376 0 376 #> 7980 TCGA-XJ-A83F-01 0 1127 0 1127 0 1127 0 1127 #> 7981 TCGA-XJ-A83G-01 0 1461 0 1461 0 1461 0 1461 #> 7982 TCGA-XJ-A83H-01 0 1280 0 1280 NA NA 0 1280 #> 7983 TCGA-XJ-A9DI-01 0 1461 0 1461 0 1461 0 1461 #> 7984 TCGA-XJ-A9DK-01 0 275 0 275 0 275 0 275 #> 7985 TCGA-XJ-A9DQ-01 0 91 0 91 NA NA 0 91 #> 7986 TCGA-XJ-A9DX-01 0 973 0 973 NA NA 0 973 #> 7987 TCGA-XK-AAIR-01 0 972 0 972 0 972 0 972 #> 7988 TCGA-XK-AAIV-01 0 1133 0 1133 0 1133 0 1133 #> 7989 TCGA-XK-AAIW-01 0 1218 0 1218 0 1218 1 427 #> 7990 TCGA-XK-AAJ3-01 0 1262 0 1262 0 1262 0 1262 #> 7991 TCGA-XK-AAJA-01 0 930 0 930 0 930 0 930 #> 7992 TCGA-XK-AAJP-01 0 1259 0 1259 0 1259 0 1259 #> 7993 TCGA-XK-AAJR-01 0 1124 0 1124 1 131 1 131 #> 7994 TCGA-XK-AAJT-01 0 1434 0 1434 NA NA 0 1434 #> 7995 TCGA-XK-AAJU-01 0 1576 0 1576 0 1576 0 1576 #> 7996 TCGA-XK-AAK1-01 0 979 0 979 0 979 0 979 #> 7997 TCGA-XQ-A8TA-01 1 146 1 146 NA NA 1 146 #> 7998 TCGA-XQ-A8TB-01 0 770 0 770 0 770 0 770 #> 7999 TCGA-Y6-A8TL-01 0 992 0 992 NA NA 0 992 #> 8000 TCGA-Y6-A9XI-01 0 526 0 526 0 526 0 526 #> 8001 TCGA-YJ-A8SW-01 0 148 0 148 NA NA 0 148 #> 8002 TCGA-YL-A8HJ-01 0 1611 0 1611 0 1611 0 1611 #> 8003 TCGA-YL-A8HK-01 0 1491 0 1491 1 1376 1 1376 #> 8004 TCGA-YL-A8HL-01 0 1565 0 1565 NA NA 0 1565 #> 8005 TCGA-YL-A8HM-01 0 1482 0 1482 1 1473 1 1473 #> 8006 TCGA-YL-A8HO-01 0 2304 0 2304 NA NA 1 1068 #> 8007 TCGA-YL-A8S8-01 0 1890 0 1890 NA NA 1 679 #> 8008 TCGA-YL-A8S9-01 0 1842 0 1842 NA NA 1 1006 #> 8009 TCGA-YL-A8SA-01 0 512 0 512 NA NA 0 512 #> 8010 TCGA-YL-A8SB-01 0 1719 0 1719 NA NA 1 1384 #> 8011 TCGA-YL-A8SC-01 0 1261 0 1261 NA NA 1 152 #> 8012 TCGA-YL-A8SF-01 0 1373 0 1373 NA NA 0 1373 #> 8013 TCGA-YL-A8SH-01 1 875 0 875 0 875 0 875 #> 8014 TCGA-YL-A8SI-01 0 1614 0 1614 1 1423 1 1423 #> 8015 TCGA-YL-A8SJ-01 0 1395 0 1395 1 752 1 752 #> 8016 TCGA-YL-A8SK-01 0 1408 0 1408 NA NA 0 1408 #> 8017 TCGA-YL-A8SL-01 0 987 0 987 0 987 0 987 #> 8018 TCGA-YL-A8SO-01 0 3479 0 3479 NA NA 0 3479 #> 8019 TCGA-YL-A8SP-01 0 2366 0 2366 NA NA 1 2036 #> 8020 TCGA-YL-A8SQ-01 0 2083 0 2083 NA NA 1 329 #> 8021 TCGA-YL-A8SR-01 0 273 0 273 NA NA 0 273 #> 8022 TCGA-YL-A9WH-01 0 427 0 427 NA NA 0 427 #> 8023 TCGA-YL-A9WI-01 0 1623 0 1623 NA NA 0 1623 #> 8024 TCGA-YL-A9WJ-01 1 1855 1 1855 NA NA 1 1476 #> 8025 TCGA-YL-A9WK-01 0 2136 0 2136 NA NA 1 1009 #> 8026 TCGA-YL-A9WL-01 0 740 0 740 1 740 1 740 #> 8027 TCGA-YL-A9WX-01 0 1518 0 1518 NA NA 1 1506 #> 8028 TCGA-YL-A9WY-01 0 1098 0 1098 NA NA 1 765 #> 8029 TCGA-ZG-A8QW-01 0 94 0 94 NA NA 0 94 #> 8030 TCGA-ZG-A8QX-01 0 442 0 442 NA NA 0 442 #> 8031 TCGA-ZG-A8QY-01 0 404 0 404 NA NA 0 404 #> 8032 TCGA-ZG-A8QZ-01 0 308 0 308 NA NA 0 308 #> 8033 TCGA-ZG-A9KY-01 0 130 0 130 NA NA 0 130 #> 8034 TCGA-ZG-A9L0-01 0 355 0 355 NA NA 0 355 #> 8035 TCGA-ZG-A9L1-01 0 1302 0 1302 NA NA 0 1302 #> 8036 TCGA-ZG-A9L2-01 0 1154 0 1154 NA NA 1 180 #> 8037 TCGA-ZG-A9L5-01 0 908 0 908 NA NA 0 908 #> 8038 TCGA-ZG-A9L6-01 0 687 0 687 NA NA 1 664 #> 8039 TCGA-ZG-A9L9-01 0 617 0 617 NA NA 1 51 #> 8040 TCGA-ZG-A9LB-01 0 583 0 583 NA NA 0 583 #> 8041 TCGA-ZG-A9LM-01 0 378 0 378 0 378 0 378 #> 8042 TCGA-ZG-A9LN-01 0 115 0 115 NA NA 0 115 #> 8043 TCGA-ZG-A9LS-01 0 516 0 516 0 516 0 516 #> 8044 TCGA-ZG-A9LU-01 0 579 0 579 NA NA 0 579 #> 8045 TCGA-ZG-A9LY-01 0 370 0 370 0 370 0 370 #> 8046 TCGA-ZG-A9LZ-01 0 692 0 692 NA NA 0 692 #> 8047 TCGA-ZG-A9M4-01 0 547 0 547 NA NA 0 547 #> 8048 TCGA-ZG-A9MC-01 0 455 0 455 NA NA 0 455 #> 8049 TCGA-ZG-A9N3-01 0 349 0 349 NA NA 0 349 #> 8050 TCGA-ZG-A9ND-01 0 410 0 410 0 410 0 410 #> 8051 TCGA-ZG-A9NI-01 0 132 0 132 0 132 0 132 #> 8052 TCGA-AF-2687-01 0 1427 0 1427 1 1267 1 1267 #> 8053 TCGA-AF-2689-11 1 1201 1 1201 NA NA 1 301 #> 8054 TCGA-AF-2690-01 1 524 0 524 NA NA 0 524 #> 8055 TCGA-AF-2691-11 0 1309 0 1309 0 1309 0 1309 #> 8056 TCGA-AF-2692-11 0 412 0 412 NA NA 1 327 #> 8057 TCGA-AF-2693-01 0 1155 0 1155 NA NA 0 1155 #> 8058 TCGA-AF-3400-11 0 1049 0 1049 NA NA 0 1049 #> 8059 TCGA-AF-3911-01 0 1148 0 1148 1 695 1 695 #> 8060 TCGA-AF-4110-01 0 912 0 912 NA NA 0 912 #> 8061 TCGA-AF-5654-01 1 512 0 512 NA NA 0 512 #> 8062 TCGA-AF-5654-11 1 512 0 512 NA NA 0 512 #> 8063 TCGA-AF-6136-01 0 741 0 741 NA NA 1 199 #> 8064 TCGA-AF-6655-01 0 609 0 609 0 609 0 609 #> 8065 TCGA-AF-6672-01 0 748 0 748 NA NA 1 279 #> 8066 TCGA-AF-A56K-01 0 2635 0 2635 1 1217 1 1217 #> 8067 TCGA-AF-A56L-01 0 2007 0 2007 0 2007 0 2007 #> 8068 TCGA-AF-A56N-01 0 360 0 360 0 360 0 360 #> 8069 TCGA-AG-3591-01 0 1035 0 1035 0 1035 0 1035 #> 8070 TCGA-AG-3592-01 0 1035 0 1035 NA NA 0 1035 #> 8071 TCGA-AG-3725-01 0 638 0 638 NA NA 0 638 #> 8072 TCGA-AG-3725-11 0 638 0 638 NA NA 0 638 #> 8073 TCGA-AG-3731-01 0 1126 0 1126 NA NA 0 1126 #> 8074 TCGA-AG-3731-11 0 1126 0 1126 NA NA 0 1126 #> 8075 TCGA-AG-3732-01 0 1003 0 1003 0 1003 0 1003 #> 8076 TCGA-AG-3732-11 0 1003 0 1003 0 1003 0 1003 #> 8077 TCGA-AG-3742-01 0 30 0 30 NA NA 0 30 #> 8078 TCGA-AG-3742-11 0 30 0 30 NA NA 0 30 #> 8079 TCGA-AG-4021-01 1 121 1 121 NA NA 1 0 #> 8080 TCGA-AG-4022-01 0 1400 0 1400 0 1400 0 1400 #> 8081 TCGA-AH-6544-01 0 1173 0 1173 NA NA 0 1173 #> 8082 TCGA-AH-6547-01 1 76 0 76 0 76 0 76 #> 8083 TCGA-AH-6549-01 0 532 0 532 0 532 0 532 #> 8084 TCGA-AH-6643-01 1 1314 1 1314 1 1026 1 1026 #> 8085 TCGA-AH-6643-11 1 1314 1 1314 1 1026 1 1026 #> 8086 TCGA-AH-6644-01 0 838 0 838 0 838 0 838 #> 8087 TCGA-AH-6897-01 0 804 0 804 0 804 0 804 #> 8088 TCGA-AH-6903-01 0 592 0 592 0 592 0 592 #> 8089 TCGA-BM-6198-01 0 646 0 646 0 646 0 646 #> 8090 TCGA-CI-6619-01 0 184 0 184 NA NA 0 184 #> 8091 TCGA-CI-6620-01 0 1009 0 1009 NA NA 1 90 #> 8092 TCGA-CI-6621-01 0 419 0 419 NA NA 0 419 #> 8093 TCGA-CI-6622-01 0 1362 0 1362 NA NA 0 1362 #> 8094 TCGA-CI-6623-01 0 1443 0 1443 NA NA 0 1443 #> 8095 TCGA-CI-6624-01 0 1466 0 1466 NA NA 0 1466 #> 8096 TCGA-CL-4957-01 0 425 0 425 0 425 0 425 #> 8097 TCGA-CL-5917-01 0 2376 0 2376 0 2376 0 2376 #> 8098 TCGA-CL-5918-01 0 218 0 218 0 218 0 218 #> 8099 TCGA-DC-4745-01 0 639 0 639 0 639 0 639 #> 8100 TCGA-DC-4749-01 0 762 0 762 0 762 0 762 #> 8101 TCGA-DC-5337-01 0 792 0 792 NA NA 0 792 #> 8102 TCGA-DC-5869-01 0 943 0 943 NA NA 0 943 #> 8103 TCGA-DC-6154-01 0 365 0 365 NA NA 0 365 #> 8104 TCGA-DC-6155-01 0 425 0 425 NA NA 0 425 #> 8105 TCGA-DC-6156-01 0 943 0 943 NA NA 1 30 #> 8106 TCGA-DC-6157-01 0 1581 0 1581 NA NA 0 1581 #> 8107 TCGA-DC-6158-01 1 334 0 334 NA NA 0 334 #> 8108 TCGA-DC-6160-01 0 1339 0 1339 NA NA 0 1339 #> 8109 TCGA-DC-6681-01 0 790 0 790 NA NA 0 790 #> 8110 TCGA-DC-6682-01 0 762 0 762 NA NA 0 762 #> 8111 TCGA-DC-6683-01 0 762 0 762 NA NA 0 762 #> 8112 TCGA-DT-5265-01 0 384 0 384 0 384 0 384 #> 8113 TCGA-DY-A0XA-01 0 3846 0 3846 NA NA 0 3846 #> 8114 TCGA-DY-A1DC-01 1 1258 NA 1258 NA NA 1 630 #> 8115 TCGA-DY-A1DD-01 1 1741 NA 1741 NA NA 0 1741 #> 8116 TCGA-DY-A1DE-01 0 3932 0 3932 NA NA 1 3316 #> 8117 TCGA-DY-A1DF-01 1 734 NA 734 NA NA 0 734 #> 8118 TCGA-DY-A1DG-01 1 1566 NA 1566 NA NA 1 592 #> 8119 TCGA-DY-A1H8-01 1 992 NA 992 NA NA 0 992 #> 8120 TCGA-EF-5830-01 0 106 0 106 NA NA 0 106 #> 8121 TCGA-EF-5831-01 0 127 0 127 NA NA 0 127 #> 8122 TCGA-EI-6506-01 0 625 0 625 NA NA 0 625 #> 8123 TCGA-EI-6507-01 0 607 0 607 NA NA 0 607 #> 8124 TCGA-EI-6508-01 0 636 0 636 NA NA 0 636 #> 8125 TCGA-EI-6509-01 0 517 0 517 NA NA 1 90 #> 8126 TCGA-EI-6510-01 0 556 0 556 NA NA 0 556 #> 8127 TCGA-EI-6511-01 0 482 0 482 NA NA 0 482 #> 8128 TCGA-EI-6512-01 0 538 0 538 NA NA 0 538 #> 8129 TCGA-EI-6513-01 0 497 0 497 NA NA 0 497 #> 8130 TCGA-EI-6514-01 0 496 0 496 NA NA 0 496 #> 8131 TCGA-EI-6881-01 0 499 0 499 NA NA 0 499 #> 8132 TCGA-EI-6882-01 0 262 0 262 NA NA 0 262 #> 8133 TCGA-EI-6884-01 0 328 0 328 NA NA 0 328 #> 8134 TCGA-EI-6885-01 0 415 0 415 NA NA 1 295 #> 8135 TCGA-EI-6917-01 0 531 0 531 NA NA 0 531 #> 8136 TCGA-EI-7002-01 0 364 0 364 NA NA 0 364 #> 8137 TCGA-EI-7004-01 0 257 0 257 NA NA 0 257 #> 8138 TCGA-F5-6464-01 1 303 NA 303 NA NA 0 303 #> 8139 TCGA-F5-6465-01 0 1506 0 1506 0 1506 0 1506 #> 8140 TCGA-F5-6571-01 0 1288 0 1288 1 122 1 122 #> 8141 TCGA-F5-6702-01 0 452 0 452 NA NA 1 368 #> 8142 TCGA-F5-6811-01 0 979 0 979 0 979 0 979 #> 8143 TCGA-F5-6812-01 0 1110 0 1110 0 1110 0 1110 #> 8144 TCGA-F5-6813-01 1 598 1 598 NA NA 1 65 #> 8145 TCGA-F5-6814-01 0 1131 0 1131 0 1131 0 1131 #> 8146 TCGA-F5-6861-01 0 1160 0 1160 0 1160 0 1160 #> 8147 TCGA-F5-6863-01 1 361 1 361 NA NA 1 191 #> 8148 TCGA-F5-6864-01 0 379 0 379 0 379 0 379 #> 8149 TCGA-G5-6233-01 1 556 1 556 NA NA 1 92 #> 8150 TCGA-G5-6235-01 0 1696 0 1696 NA NA 1 1042 #> 8151 TCGA-G5-6572-02 1 1432 0 1432 NA NA 0 1432 #> 8152 TCGA-G5-6572-01 1 1432 0 1432 NA NA 0 1432 #> 8153 TCGA-G5-6641-01 0 804 0 804 NA NA 0 804 #> 8154 TCGA-3B-A9HJ-01 0 1104 0 1104 NA NA 0 1104 #> 8155 TCGA-3B-A9HL-01 1 599 0 599 NA NA 1 229 #> 8156 TCGA-3B-A9HO-01 0 959 0 959 NA NA 1 595 #> 8157 TCGA-3B-A9HP-01 1 1627 1 1627 NA NA 1 517 #> 8158 TCGA-3B-A9HQ-01 0 2085 0 2085 0 2085 0 2085 #> 8159 TCGA-3B-A9HR-01 1 2694 1 2694 1 496 1 496 #> 8160 TCGA-3B-A9HS-01 1 1366 1 1366 1 139 1 139 #> 8161 TCGA-3B-A9HT-01 0 1665 0 1665 0 1665 1 670 #> 8162 TCGA-3B-A9HU-01 0 768 0 768 1 631 1 631 #> 8163 TCGA-3B-A9HV-01 1 437 1 437 NA NA 1 41 #> 8164 TCGA-3B-A9HX-01 0 1303 0 1303 0 1303 0 1303 #> 8165 TCGA-3B-A9HY-01 0 314 0 314 0 314 0 314 #> 8166 TCGA-3B-A9HZ-01 0 1170 0 1170 NA NA 1 309 #> 8167 TCGA-3B-A9I0-01 0 1096 0 1096 1 503 1 503 #> 8168 TCGA-3B-A9I1-01 1 567 1 567 NA NA 1 192 #> 8169 TCGA-3B-A9I3-01 0 808 0 808 NA NA 1 87 #> 8170 TCGA-3R-A8YX-01 1 17 1 17 NA NA 1 17 #> 8171 TCGA-DX-A1KU-01 1 427 1 427 NA NA 1 94 #> 8172 TCGA-DX-A1KW-01 1 995 NA 995 NA NA 0 995 #> 8173 TCGA-DX-A1KX-01 0 2087 0 2087 0 2087 0 2087 #> 8174 TCGA-DX-A1KY-01 1 391 1 391 NA NA 1 205 #> 8175 TCGA-DX-A1KZ-01 0 1372 0 1372 NA NA 1 1294 #> 8176 TCGA-DX-A1L0-01 1 564 1 564 NA NA 1 103 #> 8177 TCGA-DX-A1L1-01 1 1649 1 1649 1 349 1 349 #> 8178 TCGA-DX-A1L2-01 0 2586 0 2586 1 1480 1 1480 #> 8179 TCGA-DX-A1L3-01 1 1020 1 1020 NA NA 1 437 #> 8180 TCGA-DX-A1L4-01 0 2036 0 2036 1 340 1 340 #> 8181 TCGA-DX-A23R-01 0 2271 0 2271 NA NA 0 2271 #> 8182 TCGA-DX-A23T-01 1 160 1 160 NA NA 1 104 #> 8183 TCGA-DX-A23U-01 1 2324 1 2324 NA NA 1 873 #> 8184 TCGA-DX-A23V-01 1 2034 1 2034 NA NA 1 378 #> 8185 TCGA-DX-A23Y-01 1 191 1 191 NA NA 1 172 #> 8186 TCGA-DX-A23Z-01 1 846 1 846 NA NA 1 751 #> 8187 TCGA-DX-A240-01 0 1834 0 1834 0 1834 0 1834 #> 8188 TCGA-DX-A2IZ-01 0 261 0 261 0 261 0 261 #> 8189 TCGA-DX-A2J0-01 1 295 1 295 NA NA 1 213 #> 8190 TCGA-DX-A2J1-01 0 2901 0 2901 NA NA 0 2901 #> 8191 TCGA-DX-A2J4-01 0 2408 0 2408 0 2408 0 2408 #> 8192 TCGA-DX-A3LS-01 1 275 1 275 NA NA 1 114 #> 8193 TCGA-DX-A3LT-01 0 1492 0 1492 1 568 1 568 #> 8194 TCGA-DX-A3LU-01 0 2641 0 2641 NA NA 1 290 #> 8195 TCGA-DX-A3LW-01 0 4150 0 4150 NA NA 1 1125 #> 8196 TCGA-DX-A3LY-01 0 1017 0 1017 0 1017 0 1017 #> 8197 TCGA-DX-A3M1-01 0 1359 0 1359 NA NA 1 1212 #> 8198 TCGA-DX-A3M2-01 0 1055 0 1055 NA NA 0 1055 #> 8199 TCGA-DX-A3U5-01 0 969 0 969 NA NA 0 969 #> 8200 TCGA-DX-A3U6-01 1 1088 1 1088 1 160 1 160 #> 8201 TCGA-DX-A3U7-01 1 1552 1 1552 1 349 1 349 #> 8202 TCGA-DX-A3U8-01 1 138 1 138 1 128 1 128 #> 8203 TCGA-DX-A3U9-01 1 456 1 456 NA NA 1 203 #> 8204 TCGA-DX-A3UA-01 1 325 NA 325 0 325 0 325 #> 8205 TCGA-DX-A3UB-01 0 2247 0 2247 0 2247 0 2247 #> 8206 TCGA-DX-A3UC-01 0 2085 0 2085 1 176 1 176 #> 8207 TCGA-DX-A3UD-01 0 1534 0 1534 1 603 1 603 #> 8208 TCGA-DX-A3UE-01 1 1061 1 1061 1 224 1 224 #> 8209 TCGA-DX-A3UF-01 1 2599 1 2599 NA NA 1 964 #> 8210 TCGA-DX-A48J-01 1 296 1 296 1 97 1 97 #> 8211 TCGA-DX-A48K-01 0 1399 0 1399 0 1399 0 1399 #> 8212 TCGA-DX-A48L-01 1 738 1 738 1 316 1 316 #> 8213 TCGA-DX-A48N-01 0 1073 0 1073 NA NA 0 1073 #> 8214 TCGA-DX-A48O-01 0 1605 0 1605 0 1605 0 1605 #> 8215 TCGA-DX-A48P-01 0 1400 0 1400 0 1400 0 1400 #> 8216 TCGA-DX-A48R-01 0 805 0 805 NA NA 1 315 #> 8217 TCGA-DX-A48U-01 0 3310 0 3310 0 3310 0 3310 #> 8218 TCGA-DX-A6B7-01 0 1143 0 1143 0 1143 0 1143 #> 8219 TCGA-DX-A6B8-01 1 485 1 485 1 42 1 42 #> 8220 TCGA-DX-A6B9-01 0 1138 0 1138 0 1138 0 1138 #> 8221 TCGA-DX-A6BA-01 0 2515 0 2515 1 408 1 408 #> 8222 TCGA-DX-A6BB-01 0 1105 0 1105 NA NA 0 1105 #> 8223 TCGA-DX-A6BE-01 0 881 0 881 0 881 0 881 #> 8224 TCGA-DX-A6BF-01 0 972 0 972 NA NA 1 947 #> 8225 TCGA-DX-A6BG-01 0 1121 0 1121 1 149 1 149 #> 8226 TCGA-DX-A6BH-01 0 821 0 821 NA NA 1 232 #> 8227 TCGA-DX-A6YQ-01 1 93 0 93 0 93 0 93 #> 8228 TCGA-DX-A6YR-01 0 1247 0 1247 0 1247 0 1247 #> 8229 TCGA-DX-A6YS-01 0 2381 0 2381 0 2381 0 2381 #> 8230 TCGA-DX-A6YT-01 0 2044 0 2044 0 2044 0 2044 #> 8231 TCGA-DX-A6YU-01 0 1045 0 1045 0 1045 0 1045 #> 8232 TCGA-DX-A6YV-01 1 1536 1 1536 1 516 1 516 #> 8233 TCGA-DX-A6YX-01 1 513 1 513 1 200 1 200 #> 8234 TCGA-DX-A6YZ-01 0 2625 0 2625 0 2625 0 2625 #> 8235 TCGA-DX-A6Z0-01 1 1953 0 1953 NA NA 0 1953 #> 8236 TCGA-DX-A6Z2-01 0 3079 0 3079 1 2659 1 2659 #> 8237 TCGA-DX-A7EF-01 1 648 1 648 1 294 1 294 #> 8238 TCGA-DX-A7EI-01 1 1049 1 1049 NA NA 1 828 #> 8239 TCGA-DX-A7EL-01 0 2291 0 2291 1 2249 1 2249 #> 8240 TCGA-DX-A7EM-01 0 1892 0 1892 0 1892 0 1892 #> 8241 TCGA-DX-A7EN-01 0 923 0 923 1 352 1 352 #> 8242 TCGA-DX-A7EO-01 0 4627 0 4627 0 4627 0 4627 #> 8243 TCGA-DX-A7EQ-01 1 897 1 897 1 251 1 251 #> 8244 TCGA-DX-A7ER-01 1 1466 0 1466 0 1466 0 1466 #> 8245 TCGA-DX-A7ES-01 0 610 0 610 0 610 0 610 #> 8246 TCGA-DX-A7ET-01 0 463 0 463 0 463 0 463 #> 8247 TCGA-DX-A7EU-01 0 721 0 721 0 721 0 721 #> 8248 TCGA-DX-A8BG-01 0 546 0 546 1 330 1 330 #> 8249 TCGA-DX-A8BH-01 1 439 1 439 1 272 1 272 #> 8250 TCGA-DX-A8BJ-01 1 284 0 284 0 284 0 284 #> 8251 TCGA-DX-A8BK-01 0 1885 0 1885 0 1885 0 1885 #> 8252 TCGA-DX-A8BL-01 0 1373 0 1373 0 1373 0 1373 #> 8253 TCGA-DX-A8BM-01 0 1456 0 1456 0 1456 0 1456 #> 8254 TCGA-DX-A8BN-01 0 1161 0 1161 NA NA 0 1161 #> 8255 TCGA-DX-A8BO-01 0 1240 0 1240 NA NA 1 333 #> 8256 TCGA-DX-A8BP-01 0 428 0 428 NA NA 1 216 #> 8257 TCGA-DX-A8BQ-01 0 1579 0 1579 0 1579 0 1579 #> 8258 TCGA-DX-A8BR-01 0 4573 0 4573 0 4573 0 4573 #> 8259 TCGA-DX-A8BS-01 1 850 0 850 0 850 0 850 #> 8260 TCGA-DX-A8BT-01 0 1230 0 1230 NA NA 1 668 #> 8261 TCGA-DX-A8BU-01 1 1116 1 1116 NA NA 1 107 #> 8262 TCGA-DX-A8BV-01 1 1845 1 1845 1 357 1 357 #> 8263 TCGA-DX-A8BX-01 1 591 1 591 NA NA 1 591 #> 8264 TCGA-DX-A8BZ-01 1 200 1 200 1 90 1 90 #> 8265 TCGA-DX-AATS-01 1 35 0 35 NA NA 0 35 #> 8266 TCGA-DX-AB2E-01 0 541 0 541 1 132 1 132 #> 8267 TCGA-DX-AB2F-01 0 365 0 365 0 365 0 365 #> 8268 TCGA-DX-AB2G-01 0 478 0 478 0 478 0 478 #> 8269 TCGA-DX-AB2H-01 0 482 0 482 0 482 0 482 #> 8270 TCGA-DX-AB2J-01 1 1235 1 1235 NA NA 1 1235 #> 8271 TCGA-DX-AB2L-01 0 2007 0 2007 NA NA 0 2007 #> 8272 TCGA-DX-AB2O-01 0 2619 0 2619 0 2619 0 2619 #> 8273 TCGA-DX-AB2P-01 1 367 1 367 1 161 1 161 #> 8274 TCGA-DX-AB2Q-01 0 2030 0 2030 1 490 1 490 #> 8275 TCGA-DX-AB2S-01 0 280 0 280 0 280 0 280 #> 8276 TCGA-DX-AB2T-01 0 2369 0 2369 1 784 1 784 #> 8277 TCGA-DX-AB2V-01 0 3241 0 3241 0 3241 0 3241 #> 8278 TCGA-DX-AB2W-01 0 3238 0 3238 0 3238 0 3238 #> 8279 TCGA-DX-AB2X-01 1 404 1 404 1 111 1 111 #> 8280 TCGA-DX-AB2Z-01 0 1533 0 1533 0 1533 0 1533 #> 8281 TCGA-DX-AB30-01 1 695 1 695 1 504 1 504 #> 8282 TCGA-DX-AB32-01 0 3102 0 3102 0 3102 0 3102 #> 8283 TCGA-DX-AB35-01 0 928 0 928 1 284 1 284 #> 8284 TCGA-DX-AB36-01 1 1825 NA 1825 NA NA 0 1825 #> 8285 TCGA-DX-AB37-01 1 2575 NA 2575 0 2575 0 2575 #> 8286 TCGA-DX-AB3A-01 1 978 1 978 1 533 1 533 #> 8287 TCGA-DX-AB3B-01 0 1548 0 1548 0 1548 0 1548 #> 8288 TCGA-DX-AB3C-01 0 2169 0 2169 1 567 1 567 #> 8289 TCGA-FX-A2QS-01 0 1495 0 1495 0 1495 0 1495 #> 8290 TCGA-FX-A2QS-11 0 1495 0 1495 0 1495 0 1495 #> 8291 TCGA-FX-A3NJ-01 0 947 0 947 0 947 0 947 #> 8292 TCGA-FX-A3NK-01 0 505 0 505 0 505 0 505 #> 8293 TCGA-FX-A3RE-01 0 660 0 660 NA NA 0 660 #> 8294 TCGA-FX-A3TO-01 0 618 0 618 NA NA 0 618 #> 8295 TCGA-FX-A48G-01 1 605 1 605 NA NA 1 168 #> 8296 TCGA-FX-A76Y-01 0 471 0 471 0 471 0 471 #> 8297 TCGA-FX-A8OO-01 1 245 0 245 0 245 0 245 #> 8298 TCGA-HB-A2OT-01 0 2057 0 2057 0 2057 0 2057 #> 8299 TCGA-HB-A3L4-01 1 1061 1 1061 1 326 1 326 #> 8300 TCGA-HB-A3YV-01 1 139 1 139 NA NA 1 139 #> 8301 TCGA-HB-A43Z-01 0 1126 0 1126 1 894 1 894 #> 8302 TCGA-HB-A5W3-01 1 384 1 384 NA NA 1 384 #> 8303 TCGA-HS-A5N7-01 0 1013 0 1013 0 1013 0 1013 #> 8304 TCGA-HS-A5N8-01 1 22 1 22 NA NA 1 22 #> 8305 TCGA-HS-A5N9-01 0 1585 0 1585 0 1585 0 1585 #> 8306 TCGA-HS-A5NA-01 0 298 0 298 NA NA 0 298 #> 8307 TCGA-IE-A3OV-01 1 2448 1 2448 1 490 1 490 #> 8308 TCGA-IE-A4EH-01 0 819 0 819 0 819 0 819 #> 8309 TCGA-IE-A4EI-01 0 594 0 594 0 594 0 594 #> 8310 TCGA-IE-A4EJ-01 0 98 0 98 NA NA 0 98 #> 8311 TCGA-IE-A4EK-01 0 42 0 42 NA NA 0 42 #> 8312 TCGA-IE-A6BZ-01 0 605 0 605 0 605 0 605 #> 8313 TCGA-IF-A3RQ-01 1 1129 1 1129 1 441 1 441 #> 8314 TCGA-IF-A4AJ-01 1 767 1 767 1 560 1 560 #> 8315 TCGA-IF-A4AK-01 0 1590 0 1590 0 1590 0 1590 #> 8316 TCGA-IS-A3K6-01 1 858 1 858 NA NA 1 858 #> 8317 TCGA-IS-A3K7-01 0 5204 0 5204 1 119 1 119 #> 8318 TCGA-IS-A3K8-01 0 4845 0 4845 0 4845 0 4845 #> 8319 TCGA-IS-A3KA-01 1 413 1 413 1 76 1 76 #> 8320 TCGA-IW-A3M4-01 0 2615 0 2615 1 2207 1 2207 #> 8321 TCGA-IW-A3M5-01 1 180 1 180 1 9 1 9 #> 8322 TCGA-IW-A3M6-01 0 688 0 688 0 688 0 688 #> 8323 TCGA-JV-A5VE-01 0 499 0 499 0 499 0 499 #> 8324 TCGA-JV-A5VF-01 1 32 1 32 NA NA 1 32 #> 8325 TCGA-JV-A75J-01 1 119 1 119 NA NA 1 119 #> 8326 TCGA-K1-A3PN-02 0 3080 0 3080 1 1033 1 1033 #> 8327 TCGA-K1-A3PN-01 0 3080 0 3080 1 1033 1 1033 #> 8328 TCGA-K1-A3PO-01 0 1622 0 1622 0 1622 0 1622 #> 8329 TCGA-K1-A3PO-11 0 1622 0 1622 0 1622 0 1622 #> 8330 TCGA-K1-A42W-01 0 1891 0 1891 1 826 1 826 #> 8331 TCGA-K1-A42X-02 0 3765 0 3765 1 2036 1 2036 #> 8332 TCGA-K1-A42X-01 0 3765 0 3765 1 2036 1 2036 #> 8333 TCGA-K1-A6RT-01 0 528 0 528 1 129 1 129 #> 8334 TCGA-K1-A6RU-01 1 711 1 711 NA NA 1 142 #> 8335 TCGA-K1-A6RV-01 0 158 0 158 NA NA 0 158 #> 8336 TCGA-KD-A5QS-01 1 1941 1 1941 NA NA 1 351 #> 8337 TCGA-KD-A5QT-01 0 499 0 499 0 499 0 499 #> 8338 TCGA-KD-A5QU-01 1 1073 1 1073 1 1060 1 1060 #> 8339 TCGA-KF-A41W-01 0 356 0 356 NA NA 0 356 #> 8340 TCGA-LI-A67I-01 0 922 0 922 NA NA 1 574 #> 8341 TCGA-LI-A9QH-01 1 540 0 540 NA NA 1 426 #> 8342 TCGA-MB-A5Y8-01 0 773 0 773 0 773 0 773 #> 8343 TCGA-MB-A5Y9-01 0 252 0 252 NA NA 0 252 #> 8344 TCGA-MB-A5YA-01 0 15 0 15 0 15 0 15 #> 8345 TCGA-MB-A8JK-01 0 661 0 661 NA NA 0 661 #> 8346 TCGA-MB-A8JL-01 0 600 0 600 0 600 0 600 #> 8347 TCGA-MJ-A68H-01 0 456 0 456 0 456 0 456 #> 8348 TCGA-MJ-A68J-01 0 547 0 547 NA NA 1 268 #> 8349 TCGA-MJ-A850-01 0 681 0 681 NA NA 0 681 #> 8350 TCGA-MO-A47P-01 0 352 0 352 0 352 0 352 #> 8351 TCGA-MO-A47R-01 1 318 1 318 1 259 1 259 #> 8352 TCGA-N1-A6IA-01 1 224 1 224 NA NA 1 116 #> 8353 TCGA-PC-A5DK-01 0 3740 0 3740 0 3740 0 3740 #> 8354 TCGA-PC-A5DL-01 1 1142 NA 1142 NA NA 0 1142 #> 8355 TCGA-PC-A5DM-01 1 193 NA 193 NA NA 0 193 #> 8356 TCGA-PC-A5DN-01 1 1175 0 1175 NA NA 0 1175 #> 8357 TCGA-PC-A5DO-01 1 2464 1 2464 NA NA 1 2464 #> 8358 TCGA-PC-A5DP-01 1 550 1 550 NA NA 1 550 #> 8359 TCGA-PT-A8TR-01 0 813 0 813 NA NA 0 813 #> 8360 TCGA-QC-A6FX-01 0 637 0 637 0 637 0 637 #> 8361 TCGA-QC-A7B5-01 0 398 0 398 NA NA 1 259 #> 8362 TCGA-QC-AA9N-01 0 537 0 537 NA NA 0 537 #> 8363 TCGA-QQ-A5V2-01 0 56 0 56 NA NA 0 56 #> 8364 TCGA-QQ-A5V9-01 1 1424 1 1424 1 405 1 405 #> 8365 TCGA-QQ-A5VA-01 1 550 1 550 NA NA 1 550 #> 8366 TCGA-QQ-A5VB-01 1 1478 1 1478 NA NA 1 111 #> 8367 TCGA-QQ-A5VC-01 0 1092 0 1092 0 1092 0 1092 #> 8368 TCGA-QQ-A5VD-01 0 1129 0 1129 0 1129 0 1129 #> 8369 TCGA-QQ-A8VB-01 0 5723 0 5723 NA NA 1 2682 #> 8370 TCGA-QQ-A8VD-01 0 3964 0 3964 NA NA 1 499 #> 8371 TCGA-QQ-A8VF-01 0 3406 0 3406 NA NA 0 3406 #> 8372 TCGA-QQ-A8VG-01 1 1970 1 1970 NA NA 1 1852 #> 8373 TCGA-QQ-A8VH-01 1 320 1 320 NA NA 1 197 #> 8374 TCGA-RN-A68Q-01 0 22 0 22 NA NA 0 22 #> 8375 TCGA-RN-AAAQ-01 0 510 0 510 NA NA 1 307 #> 8376 TCGA-SG-A6Z4-01 0 576 0 576 NA NA 1 105 #> 8377 TCGA-SG-A6Z7-01 1 118 0 118 NA NA 0 118 #> 8378 TCGA-SG-A849-01 0 533 0 533 NA NA 0 533 #> 8379 TCGA-SI-A71O-06 1 694 1 694 NA NA 1 264 #> 8380 TCGA-SI-A71O-01 1 694 1 694 NA NA 1 264 #> 8381 TCGA-SI-A71P-01 0 771 0 771 NA NA 0 771 #> 8382 TCGA-SI-A71Q-01 0 996 0 996 0 996 0 996 #> 8383 TCGA-SI-AA8B-01 1 262 1 262 NA NA 1 262 #> 8384 TCGA-SI-AA8C-01 0 597 0 597 NA NA 1 273 #> 8385 TCGA-UE-A6QT-01 0 402 0 402 0 402 0 402 #> 8386 TCGA-UE-A6QU-01 0 408 0 408 0 408 0 408 #> 8387 TCGA-VT-A80G-01 0 326 0 326 1 26 1 26 #> 8388 TCGA-VT-A80J-02 0 796 0 796 1 355 1 355 #> 8389 TCGA-VT-A80J-01 0 796 0 796 1 355 1 355 #> 8390 TCGA-VT-AB3D-01 0 379 0 379 0 379 0 379 #> 8391 TCGA-WK-A8XO-01 1 363 1 363 1 105 1 105 #> 8392 TCGA-WK-A8XQ-01 1 146 1 146 NA NA 1 27 #> 8393 TCGA-WK-A8XS-01 0 2579 0 2579 0 2579 0 2579 #> 8394 TCGA-WK-A8XT-01 1 1262 1 1262 1 599 1 599 #> 8395 TCGA-WK-A8XX-01 1 1164 1 1164 1 111 1 111 #> 8396 TCGA-WK-A8XY-01 1 1991 1 1991 NA NA 1 103 #> 8397 TCGA-WK-A8XZ-01 1 1722 1 1722 1 89 1 89 #> 8398 TCGA-WK-A8Y0-01 1 688 1 688 1 111 1 111 #> 8399 TCGA-WP-A9GB-01 1 261 1 261 NA NA 1 214 #> 8400 TCGA-X2-A95T-01 0 1927 0 1927 0 1927 0 1927 #> 8401 TCGA-X6-A7W8-01 1 804 1 804 NA NA 1 146 #> 8402 TCGA-X6-A7WA-01 0 1092 0 1092 NA NA 0 1092 #> 8403 TCGA-X6-A7WB-01 1 550 1 550 NA NA 1 104 #> 8404 TCGA-X6-A7WC-01 0 1379 0 1379 1 301 1 301 #> 8405 TCGA-X6-A7WD-01 0 938 0 938 1 558 1 558 #> 8406 TCGA-X6-A8C2-01 0 1070 0 1070 NA NA 1 7 #> 8407 TCGA-X6-A8C3-01 0 583 0 583 NA NA 0 583 #> 8408 TCGA-X6-A8C4-01 1 628 1 628 NA NA 1 71 #> 8409 TCGA-X6-A8C5-01 0 1547 0 1547 0 1547 0 1547 #> 8410 TCGA-X6-A8C6-01 1 1067 1 1067 NA NA 1 408 #> 8411 TCGA-X6-A8C7-01 0 896 0 896 0 896 0 896 #> 8412 TCGA-X9-A971-01 0 831 0 831 1 224 1 224 #> 8413 TCGA-X9-A973-01 0 1108 0 1108 1 119 1 119 #> 8414 TCGA-Z4-A8JB-01 0 133 0 133 0 133 0 133 #> 8415 TCGA-Z4-A9VC-01 0 407 0 407 0 407 0 407 #> 8416 TCGA-Z4-AAPF-01 0 485 0 485 0 485 0 485 #> 8417 TCGA-Z4-AAPG-01 0 486 0 486 0 486 0 486 #> 8418 TCGA-3N-A9WB-06 1 518 1 518 NA NA 1 426 #> 8419 TCGA-3N-A9WC-06 0 2022 0 2022 NA NA 1 1705 #> 8420 TCGA-3N-A9WD-06 1 395 1 395 NA NA 1 306 #> 8421 TCGA-BF-A1PU-01 0 387 0 387 NA NA 1 484 #> 8422 TCGA-BF-A1PV-01 0 14 0 14 NA NA 0 14 #> 8423 TCGA-BF-A1PX-01 1 282 0 282 NA NA 0 282 #> 8424 TCGA-BF-A1PZ-01 0 853 0 853 NA NA 0 853 #> 8425 TCGA-BF-A1Q0-01 0 831 0 831 NA NA 0 831 #> 8426 TCGA-BF-A3DJ-01 0 464 0 464 NA NA 1 217 #> 8427 TCGA-BF-A3DL-01 0 769 0 769 NA NA 0 769 #> 8428 TCGA-BF-A3DM-01 0 601 0 601 NA NA 0 601 #> 8429 TCGA-BF-A3DN-01 0 717 0 717 NA NA 0 717 #> 8430 TCGA-BF-A5EO-01 0 703 0 703 NA NA 0 703 #> 8431 TCGA-BF-A5EP-01 0 335 0 335 NA NA 0 335 #> 8432 TCGA-BF-A5EQ-01 0 323 0 323 NA NA 0 323 #> 8433 TCGA-BF-A5ER-01 0 327 0 327 NA NA 0 327 #> 8434 TCGA-BF-A5ES-01 0 490 0 490 NA NA 0 490 #> 8435 TCGA-BF-A9VF-01 0 440 0 440 NA NA 0 440 #> 8436 TCGA-BF-AAOU-01 0 476 0 476 NA NA 0 476 #> 8437 TCGA-BF-AAOX-01 0 444 0 444 NA NA 0 444 #> 8438 TCGA-BF-AAP0-06 0 454 0 454 NA NA 0 454 #> 8439 TCGA-BF-AAP1-01 0 409 0 409 NA NA 0 409 #> 8440 TCGA-BF-AAP2-01 0 405 0 405 NA NA 0 405 #> 8441 TCGA-BF-AAP4-01 0 335 0 335 NA NA 0 335 #> 8442 TCGA-BF-AAP6-01 0 325 0 325 NA NA 0 325 #> 8443 TCGA-BF-AAP7-01 0 318 0 318 NA NA 0 318 #> 8444 TCGA-BF-AAP8-01 0 447 0 447 NA NA 0 447 #> 8445 TCGA-D3-A1Q1-06 1 504 1 504 NA NA 1 58 #> 8446 TCGA-D3-A1Q3-06 1 507 1 507 NA NA 1 507 #> 8447 TCGA-D3-A1Q4-06 0 3408 0 3408 NA NA 0 3408 #> 8448 TCGA-D3-A1Q5-06 1 3424 NA 3424 NA NA 1 2452 #> 8449 TCGA-D3-A1Q6-06 1 2184 0 2184 NA NA 1 48 #> 8450 TCGA-D3-A1Q7-06 0 4053 0 4053 NA NA 1 921 #> 8451 TCGA-D3-A1Q8-06 1 854 1 854 NA NA 1 147 #> 8452 TCGA-D3-A1Q9-06 1 961 1 961 NA NA 1 44 #> 8453 TCGA-D3-A1QA-07 0 2765 0 2765 NA NA 1 1393 #> 8454 TCGA-D3-A1QA-06 0 2765 0 2765 NA NA 1 1393 #> 8455 TCGA-D3-A1QB-06 0 2912 0 2912 NA NA 1 0 #> 8456 TCGA-D3-A2J6-06 1 1321 1 1321 NA NA 1 448 #> 8457 TCGA-D3-A2J7-06 1 3136 1 3136 NA NA 1 13 #> 8458 TCGA-D3-A2J8-06 1 1992 1 1992 NA NA 1 1737 #> 8459 TCGA-D3-A2J9-06 1 723 1 723 NA NA 1 231 #> 8460 TCGA-D3-A2JA-06 0 3514 0 3514 NA NA 1 40 #> 8461 TCGA-D3-A2JB-06 NA NA NA NA NA NA NA NA #> 8462 TCGA-D3-A2JC-06 0 2639 0 2639 NA NA 0 2639 #> 8463 TCGA-D3-A2JD-06 1 361 1 361 NA NA 1 85 #> 8464 TCGA-D3-A2JE-06 1 841 1 841 NA NA 1 149 #> 8465 TCGA-D3-A2JF-06 0 1888 0 1888 NA NA 1 25 #> 8466 TCGA-D3-A2JG-06 1 3453 1 3453 NA NA 1 3279 #> 8467 TCGA-D3-A2JH-06 0 1280 0 1280 NA NA 1 569 #> 8468 TCGA-D3-A2JK-06 1 368 1 368 NA NA 1 261 #> 8469 TCGA-D3-A2JL-06 0 5219 0 5219 NA NA 1 2638 #> 8470 TCGA-D3-A2JN-06 1 2022 0 2022 NA NA 0 2022 #> 8471 TCGA-D3-A2JO-06 0 2010 0 2010 NA NA 1 50 #> 8472 TCGA-D3-A2JP-06 0 1812 0 1812 NA NA 1 227 #> 8473 TCGA-D3-A3BZ-06 0 3976 0 3976 NA NA 1 2340 #> 8474 TCGA-D3-A3C1-06 0 NA 0 NA NA NA 0 NA #> 8475 TCGA-D3-A3C3-06 0 NA 0 NA NA NA 0 NA #> 8476 TCGA-D3-A3C6-06 1 1766 1 1766 NA NA 1 1441 #> 8477 TCGA-D3-A3C7-06 0 1429 0 1429 NA NA 0 1429 #> 8478 TCGA-D3-A3C8-06 0 1409 0 1409 NA NA 1 55 #> 8479 TCGA-D3-A3CB-06 0 5065 0 5065 NA NA 0 5065 #> 8480 TCGA-D3-A3CC-06 0 2644 0 2644 NA NA 1 96 #> 8481 TCGA-D3-A3CE-06 1 1832 1 1832 NA NA 1 0 #> 8482 TCGA-D3-A3CF-06 1 746 1 746 NA NA 1 129 #> 8483 TCGA-D3-A3ML-06 1 422 1 422 NA NA 1 32 #> 8484 TCGA-D3-A3MO-06 1 284 1 284 NA NA 1 47 #> 8485 TCGA-D3-A3MR-06 0 3151 0 3151 NA NA 1 3108 #> 8486 TCGA-D3-A3MU-06 0 1209 0 1209 NA NA 1 750 #> 8487 TCGA-D3-A3MV-06 0 1378 0 1378 NA NA 1 16 #> 8488 TCGA-D3-A51E-06 0 5318 0 5318 NA NA 0 5318 #> 8489 TCGA-D3-A51F-06 0 1695 0 1695 NA NA 0 1695 #> 8490 TCGA-D3-A51G-06 NA NA NA NA NA NA NA NA #> 8491 TCGA-D3-A51J-06 0 4414 0 4414 NA NA 1 2008 #> 8492 TCGA-D3-A51K-06 0 1002 0 1002 NA NA 0 1002 #> 8493 TCGA-D3-A51N-06 0 688 0 688 NA NA 1 18 #> 8494 TCGA-D3-A51R-06 0 1941 0 1941 NA NA 1 1016 #> 8495 TCGA-D3-A51T-06 0 818 0 818 NA NA 1 210 #> 8496 TCGA-D3-A5GL-06 0 3826 0 3826 NA NA 1 1092 #> 8497 TCGA-D3-A5GN-06 0 4129 0 4129 NA NA 1 1279 #> 8498 TCGA-D3-A5GO-06 0 4195 0 4195 NA NA 1 757 #> 8499 TCGA-D3-A5GR-06 0 5424 0 5424 NA NA 1 0 #> 8500 TCGA-D3-A5GS-06 0 553 0 553 NA NA 1 44 #> 8501 TCGA-D3-A5GT-01 0 487 0 487 NA NA 1 291 #> 8502 TCGA-D3-A5GU-06 0 3808 0 3808 NA NA 1 3074 #> 8503 TCGA-D3-A8GB-06 1 938 1 938 NA NA 1 347 #> 8504 TCGA-D3-A8GC-06 1 2421 1 2421 NA NA 1 1859 #> 8505 TCGA-D3-A8GD-06 0 718 0 718 NA NA 1 147 #> 8506 TCGA-D3-A8GE-06 0 804 0 804 NA NA 1 59 #> 8507 TCGA-D3-A8GI-06 1 1780 1 1780 NA NA 1 50 #> 8508 TCGA-D3-A8GJ-06 0 7342 0 7342 NA NA 1 1443 #> 8509 TCGA-D3-A8GK-06 0 5177 0 5177 NA NA 1 1555 #> 8510 TCGA-D3-A8GL-06 1 2711 1 2711 NA NA 1 1333 #> 8511 TCGA-D3-A8GM-06 1 3259 0 3259 NA NA 0 3259 #> 8512 TCGA-D3-A8GN-06 0 4897 0 4897 NA NA 1 787 #> 8513 TCGA-D3-A8GO-06 1 NA 1 NA NA NA 1 NA #> 8514 TCGA-D3-A8GP-06 0 4646 0 4646 NA NA 1 535 #> 8515 TCGA-D3-A8GQ-06 1 884 1 884 NA NA 1 578 #> 8516 TCGA-D3-A8GR-06 NA NA NA NA NA NA NA NA #> 8517 TCGA-D3-A8GS-06 1 3564 1 3564 NA NA 1 2641 #> 8518 TCGA-D3-A8GV-06 1 5101 1 5101 NA NA 1 3896 #> 8519 TCGA-D9-A148-06 0 4609 0 4609 NA NA 1 4287 #> 8520 TCGA-D9-A149-06 0 1663 0 1663 NA NA 1 1290 #> 8521 TCGA-D9-A1JW-06 0 111 0 111 NA NA 1 10 #> 8522 TCGA-D9-A1JX-06 1 216 1 216 NA NA 1 195 #> 8523 TCGA-D9-A1X3-06 0 551 0 551 NA NA 0 551 #> 8524 TCGA-D9-A3Z1-06 1 468 1 468 NA NA 1 335 #> 8525 TCGA-D9-A3Z3-06 0 678 0 678 NA NA 0 678 #> 8526 TCGA-D9-A3Z4-01 1 519 1 519 NA NA 1 192 #> 8527 TCGA-D9-A4Z3-01 0 505 0 505 NA NA 1 100 #> 8528 TCGA-D9-A4Z5-01 0 218 0 218 NA NA 0 218 #> 8529 TCGA-D9-A4Z6-06 1 561 1 561 NA NA 1 213 #> 8530 TCGA-D9-A6E9-06 0 301 0 301 NA NA 0 301 #> 8531 TCGA-D9-A6EA-06 0 766 0 766 NA NA 0 766 #> 8532 TCGA-D9-A6EC-06 0 2359 0 2359 NA NA 0 2359 #> 8533 TCGA-D9-A6EG-06 1 698 NA 698 NA NA 1 398 #> 8534 TCGA-DA-A1HV-06 0 2329 0 2329 NA NA 1 866 #> 8535 TCGA-DA-A1HW-06 0 820 0 820 NA NA 1 852 #> 8536 TCGA-DA-A1HY-06 0 4407 0 4407 NA NA 0 4407 #> 8537 TCGA-DA-A1I0-06 1 620 1 620 NA NA 1 599 #> 8538 TCGA-DA-A1I1-06 0 6768 0 6768 NA NA 1 5591 #> 8539 TCGA-DA-A1I2-06 1 5370 1 5370 NA NA 1 4679 #> 8540 TCGA-DA-A1I4-06 1 1093 1 1093 NA NA 1 889 #> 8541 TCGA-DA-A1I5-06 0 4107 0 4107 NA NA 0 4107 #> 8542 TCGA-DA-A1I7-06 0 2703 0 2703 NA NA 1 755 #> 8543 TCGA-DA-A1I8-06 1 1640 1 1640 NA NA 1 961 #> 8544 TCGA-DA-A1IA-06 1 2005 1 2005 NA NA 1 2005 #> 8545 TCGA-DA-A1IB-06 0 825 0 825 NA NA 1 243 #> 8546 TCGA-DA-A1IC-06 1 2071 1 2071 NA NA 1 1930 #> 8547 TCGA-DA-A3F2-06 1 1032 1 1032 NA NA 1 430 #> 8548 TCGA-DA-A3F3-06 1 319 1 319 NA NA 1 319 #> 8549 TCGA-DA-A3F5-06 1 6873 1 6873 NA NA 1 6841 #> 8550 TCGA-DA-A3F8-06 0 1319 0 1319 NA NA 0 1319 #> 8551 TCGA-DA-A95V-06 0 2193 0 2193 NA NA 0 2193 #> 8552 TCGA-DA-A95W-06 0 1136 0 1136 NA NA 0 1136 #> 8553 TCGA-DA-A95X-06 0 2249 0 2249 NA NA 0 2249 #> 8554 TCGA-DA-A95Y-06 1 430 1 430 NA NA 1 338 #> 8555 TCGA-DA-A95Z-06 0 396 0 396 NA NA 0 396 #> 8556 TCGA-DA-A960-01 0 804 0 804 NA NA 0 804 #> 8557 TCGA-EB-A1NK-01 0 1039 0 1039 NA NA 0 1039 #> 8558 TCGA-EB-A24C-01 0 632 0 632 NA NA 1 465 #> 8559 TCGA-EB-A24D-01 0 645 0 645 NA NA 1 500 #> 8560 TCGA-EB-A299-01 0 378 0 378 NA NA 0 378 #> 8561 TCGA-EB-A3HV-01 0 39 0 39 NA NA 0 39 #> 8562 TCGA-EB-A3XB-01 0 796 0 796 NA NA 0 796 #> 8563 TCGA-EB-A3XC-01 0 650 0 650 NA NA 1 74 #> 8564 TCGA-EB-A3XD-01 0 1160 0 1160 NA NA 0 1160 #> 8565 TCGA-EB-A3XE-01 0 180 0 180 NA NA 0 180 #> 8566 TCGA-EB-A3XF-01 0 278 0 278 NA NA 0 278 #> 8567 TCGA-EB-A3Y6-01 0 126 0 126 NA NA 0 126 #> 8568 TCGA-EB-A3Y7-01 1 326 0 326 NA NA 0 326 #> 8569 TCGA-EB-A41A-01 0 262 0 262 NA NA 0 262 #> 8570 TCGA-EB-A41B-01 0 291 0 291 NA NA 0 291 #> 8571 TCGA-EB-A42Y-01 1 721 1 721 NA NA 1 721 #> 8572 TCGA-EB-A42Z-01 0 441 0 441 NA NA 0 441 #> 8573 TCGA-EB-A430-01 0 0 0 0 NA NA 0 0 #> 8574 TCGA-EB-A431-01 0 568 0 568 NA NA 0 568 #> 8575 TCGA-EB-A44N-01 1 205 1 205 NA NA 1 115 #> 8576 TCGA-EB-A44O-01 0 81 0 81 NA NA 1 60 #> 8577 TCGA-EB-A44P-01 0 741 0 741 NA NA 0 741 #> 8578 TCGA-EB-A44Q-06 0 422 0 422 NA NA 0 422 #> 8579 TCGA-EB-A44R-06 1 315 0 315 NA NA 0 315 #> 8580 TCGA-EB-A4IQ-01 1 636 0 636 NA NA 1 337 #> 8581 TCGA-EB-A4IS-01 0 774 0 774 NA NA 0 774 #> 8582 TCGA-EB-A4OY-01 0 977 0 977 NA NA 0 977 #> 8583 TCGA-EB-A4OZ-01 0 620 0 620 NA NA 0 620 #> 8584 TCGA-EB-A4P0-01 1 326 0 326 NA NA 0 326 #> 8585 TCGA-EB-A4XL-01 0 777 0 777 NA NA 0 777 #> 8586 TCGA-EB-A51B-01 0 931 0 931 NA NA 0 931 #> 8587 TCGA-EB-A550-01 1 264 0 264 NA NA 0 264 #> 8588 TCGA-EB-A551-01 0 590 0 590 NA NA 0 590 #> 8589 TCGA-EB-A553-01 0 226 0 226 NA NA 0 226 #> 8590 TCGA-EB-A57M-01 1 472 0 472 NA NA 0 472 #> 8591 TCGA-EB-A5FP-01 1 454 1 454 NA NA 1 24 #> 8592 TCGA-EB-A5KH-06 1 619 0 619 NA NA 0 619 #> 8593 TCGA-EB-A5SE-01 1 401 1 401 NA NA 1 367 #> 8594 TCGA-EB-A5SF-01 1 369 0 369 NA NA 0 369 #> 8595 TCGA-EB-A5SG-06 0 2076 0 2076 NA NA 1 1372 #> 8596 TCGA-EB-A5SH-06 0 1643 0 1643 NA NA 1 1065 #> 8597 TCGA-EB-A5UL-06 0 891 0 891 NA NA 0 891 #> 8598 TCGA-EB-A5UM-01 0 779 0 779 NA NA 0 779 #> 8599 TCGA-EB-A5UN-06 0 1792 0 1792 NA NA 1 1689 #> 8600 TCGA-EB-A5VU-01 1 321 1 321 NA NA 1 217 #> 8601 TCGA-EB-A5VV-06 0 214 0 214 NA NA 0 214 #> 8602 TCGA-EB-A6L9-06 0 1109 0 1109 NA NA 0 1109 #> 8603 TCGA-EB-A6QY-01 0 382 0 382 NA NA 1 36 #> 8604 TCGA-EB-A6QZ-01 1 352 1 352 NA NA 1 129 #> 8605 TCGA-EB-A6R0-01 1 608 0 608 NA NA 0 608 #> 8606 TCGA-EB-A82B-01 0 390 0 390 NA NA 0 390 #> 8607 TCGA-EB-A82C-01 0 17 0 17 NA NA 0 17 #> 8608 TCGA-EB-A85I-01 0 362 0 362 NA NA 0 362 #> 8609 TCGA-EB-A85J-01 0 360 0 360 NA NA 1 138 #> 8610 TCGA-EB-A97M-01 0 414 0 414 NA NA 0 414 #> 8611 TCGA-EE-A17X-06 1 907 1 907 NA NA 1 531 #> 8612 TCGA-EE-A17Y-06 1 828 1 828 NA NA 1 317 #> 8613 TCGA-EE-A17Z-06 1 263 1 263 NA NA 1 138 #> 8614 TCGA-EE-A180-06 1 2889 1 2889 NA NA 1 850 #> 8615 TCGA-EE-A181-06 1 1026 0 1026 NA NA 1 788 #> 8616 TCGA-EE-A182-06 1 447 1 447 NA NA 1 270 #> 8617 TCGA-EE-A183-06 NA NA NA NA NA NA NA NA #> 8618 TCGA-EE-A184-06 1 2073 NA 2073 NA NA 1 1309 #> 8619 TCGA-EE-A185-06 1 151 1 151 NA NA 1 85 #> 8620 TCGA-EE-A20B-06 0 4070 0 4070 NA NA 0 4070 #> 8621 TCGA-EE-A20C-06 NA NA NA NA NA NA NA NA #> 8622 TCGA-EE-A20F-06 0 2785 0 2785 NA NA 0 2785 #> 8623 TCGA-EE-A20H-06 1 5118 1 5118 NA NA 1 4667 #> 8624 TCGA-EE-A20I-06 1 412 1 412 NA NA 1 53 #> 8625 TCGA-EE-A29A-06 1 1927 1 1927 NA NA 1 867 #> 8626 TCGA-EE-A29B-06 1 2588 1 2588 NA NA 1 490 #> 8627 TCGA-EE-A29C-06 1 2402 1 2402 NA NA 1 204 #> 8628 TCGA-EE-A29D-06 1 425 NA 425 NA NA 0 425 #> 8629 TCGA-EE-A29E-06 0 1940 0 1940 NA NA 0 1940 #> 8630 TCGA-EE-A29G-06 1 2192 1 2192 NA NA 1 726 #> 8631 TCGA-EE-A29H-06 0 1966 0 1966 NA NA 1 1231 #> 8632 TCGA-EE-A29L-06 1 79 NA 79 NA NA 1 55 #> 8633 TCGA-EE-A29M-06 0 1729 0 1729 NA NA 0 1729 #> 8634 TCGA-EE-A29N-06 1 566 1 566 NA NA 1 478 #> 8635 TCGA-EE-A29P-06 0 1716 0 1716 NA NA 1 1668 #> 8636 TCGA-EE-A29Q-06 1 2030 1 2030 NA NA 1 1256 #> 8637 TCGA-EE-A29R-06 0 440 0 440 NA NA 1 426 #> 8638 TCGA-EE-A29S-06 1 1864 1 1864 NA NA 1 1418 #> 8639 TCGA-EE-A29T-06 0 11252 0 11252 NA NA 1 7483 #> 8640 TCGA-EE-A29V-06 1 787 1 787 NA NA 1 96 #> 8641 TCGA-EE-A29W-06 NA NA NA NA NA NA NA NA #> 8642 TCGA-EE-A29X-06 1 545 1 545 NA NA 1 391 #> 8643 TCGA-EE-A2A0-06 1 1424 1 1424 NA NA 1 1247 #> 8644 TCGA-EE-A2A1-06 0 3527 0 3527 NA NA 1 3488 #> 8645 TCGA-EE-A2A2-06 0 1814 0 1814 NA NA 0 1814 #> 8646 TCGA-EE-A2A5-06 1 1195 1 1195 NA NA 1 1028 #> 8647 TCGA-EE-A2A6-06 0 2620 0 2620 NA NA 1 1505 #> 8648 TCGA-EE-A2GB-06 0 1803 0 1803 NA NA 0 1803 #> 8649 TCGA-EE-A2GC-06 0 2051 0 2051 NA NA 0 2051 #> 8650 TCGA-EE-A2GD-06 1 10346 1 10346 NA NA 1 3689 #> 8651 TCGA-EE-A2GE-06 0 5286 0 5286 NA NA 1 5276 #> 8652 TCGA-EE-A2GH-06 0 6699 0 6699 NA NA 0 6699 #> 8653 TCGA-EE-A2GI-06 0 1482 0 1482 NA NA 0 1482 #> 8654 TCGA-EE-A2GJ-06 1 3266 1 3266 NA NA 1 733 #> 8655 TCGA-EE-A2GK-06 0 1665 0 1665 NA NA 1 1498 #> 8656 TCGA-EE-A2GL-06 0 2423 0 2423 NA NA 1 2329 #> 8657 TCGA-EE-A2GM-06 0 2296 0 2296 NA NA 1 1218 #> 8658 TCGA-EE-A2GN-06 1 3106 1 3106 NA NA 1 2422 #> 8659 TCGA-EE-A2GO-06 0 3857 0 3857 NA NA 1 2216 #> 8660 TCGA-EE-A2GP-06 1 423 1 423 NA NA 1 251 #> 8661 TCGA-EE-A2GR-06 1 1301 1 1301 NA NA 1 1301 #> 8662 TCGA-EE-A2GS-06 1 2470 1 2470 NA NA 1 1565 #> 8663 TCGA-EE-A2GT-06 0 1365 0 1365 NA NA 1 281 #> 8664 TCGA-EE-A2GU-06 0 2884 0 2884 NA NA 0 2884 #> 8665 TCGA-EE-A2M5-06 1 659 1 659 NA NA 1 537 #> 8666 TCGA-EE-A2M6-06 0 3932 0 3932 NA NA 0 3932 #> 8667 TCGA-EE-A2M7-06 1 877 1 877 NA NA 1 799 #> 8668 TCGA-EE-A2M8-06 1 601 1 601 NA NA 1 498 #> 8669 TCGA-EE-A2MC-06 1 1871 0 1871 NA NA 1 896 #> 8670 TCGA-EE-A2MD-06 1 1438 1 1438 NA NA 1 1344 #> 8671 TCGA-EE-A2ME-06 1 3141 1 3141 NA NA 1 2703 #> 8672 TCGA-EE-A2MF-06 1 8174 1 8174 NA NA 1 8071 #> 8673 TCGA-EE-A2MG-06 1 3139 1 3139 NA NA 1 2585 #> 8674 TCGA-EE-A2MH-06 1 516 1 516 NA NA 1 440 #> 8675 TCGA-EE-A2MI-06 1 6225 1 6225 NA NA 1 2673 #> 8676 TCGA-EE-A2MJ-06 1 2927 0 2927 NA NA 1 396 #> 8677 TCGA-EE-A2MK-06 0 5487 0 5487 NA NA 0 5487 #> 8678 TCGA-EE-A2ML-06 1 6590 1 6590 NA NA 1 4983 #> 8679 TCGA-EE-A2MM-06 1 5107 1 5107 NA NA 1 1357 #> 8680 TCGA-EE-A2MN-06 1 1446 1 1446 NA NA 1 969 #> 8681 TCGA-EE-A2MP-06 0 7563 0 7563 NA NA 1 365 #> 8682 TCGA-EE-A2MQ-06 1 1315 1 1315 NA NA 1 986 #> 8683 TCGA-EE-A2MR-06 0 4088 0 4088 NA NA 1 3136 #> 8684 TCGA-EE-A2MS-06 0 4942 0 4942 NA NA 1 1883 #> 8685 TCGA-EE-A2MT-06 0 2166 0 2166 NA NA 0 2166 #> 8686 TCGA-EE-A2MU-06 0 1620 0 1620 NA NA 0 1620 #> 8687 TCGA-EE-A3AA-06 0 3781 0 3781 NA NA 0 3781 #> 8688 TCGA-EE-A3AB-06 0 3733 0 3733 NA NA 0 3733 #> 8689 TCGA-EE-A3AC-06 0 1948 0 1948 NA NA 0 1948 #> 8690 TCGA-EE-A3AD-06 1 875 1 875 NA NA 1 554 #> 8691 TCGA-EE-A3AE-06 0 1658 0 1658 NA NA 0 1658 #> 8692 TCGA-EE-A3AF-06 1 420 1 420 NA NA 1 201 #> 8693 TCGA-EE-A3AG-06 1 1265 1 1265 NA NA 1 229 #> 8694 TCGA-EE-A3AH-06 1 4222 1 4222 NA NA 1 1981 #> 8695 TCGA-EE-A3J3-06 1 5237 1 5237 NA NA 1 4523 #> 8696 TCGA-EE-A3J4-06 1 3869 1 3869 NA NA 1 1429 #> 8697 TCGA-EE-A3J5-06 1 1124 1 1124 NA NA 1 467 #> 8698 TCGA-EE-A3J7-06 0 1949 0 1949 NA NA 1 1270 #> 8699 TCGA-EE-A3J8-06 1 1044 0 1044 NA NA 1 1035 #> 8700 TCGA-EE-A3JA-06 1 1618 1 1618 NA NA 1 539 #> 8701 TCGA-EE-A3JB-06 0 6138 0 6138 NA NA 1 1434 #> 8702 TCGA-EE-A3JD-06 1 832 1 832 NA NA 1 364 #> 8703 TCGA-EE-A3JE-06 0 1562 0 1562 NA NA 1 194 #> 8704 TCGA-EE-A3JH-06 0 4086 0 4086 NA NA 1 537 #> 8705 TCGA-EE-A3JI-06 1 4648 1 4648 NA NA 1 725 #> 8706 TCGA-ER-A193-06 1 955 1 955 NA NA 1 806 #> 8707 TCGA-ER-A194-01 1 1354 1 1354 NA NA 1 1354 #> 8708 TCGA-ER-A195-06 1 1078 1 1078 NA NA 1 1078 #> 8709 TCGA-ER-A196-01 0 1785 0 1785 NA NA 0 1785 #> 8710 TCGA-ER-A197-06 1 424 1 424 NA NA 1 110 #> 8711 TCGA-ER-A198-06 1 1544 1 1544 NA NA 1 0 #> 8712 TCGA-ER-A199-06 1 279 1 279 NA NA 1 119 #> 8713 TCGA-ER-A19A-06 0 2365 0 2365 NA NA 1 1617 #> 8714 TCGA-ER-A19B-06 1 2993 1 2993 NA NA 1 829 #> 8715 TCGA-ER-A19C-06 1 1487 1 1487 NA NA 1 1487 #> 8716 TCGA-ER-A19D-06 1 383 1 383 NA NA 1 357 #> 8717 TCGA-ER-A19E-06 1 396 1 396 NA NA 1 64 #> 8718 TCGA-ER-A19F-06 1 802 0 802 NA NA 0 802 #> 8719 TCGA-ER-A19G-06 0 9188 0 9188 NA NA 0 9188 #> 8720 TCGA-ER-A19H-06 1 4634 0 4634 NA NA 0 4634 #> 8721 TCGA-ER-A19J-06 1 196 1 196 NA NA 1 98 #> 8722 TCGA-ER-A19K-01 1 469 1 469 NA NA 1 211 #> 8723 TCGA-ER-A19L-06 1 4000 1 4000 NA NA 1 3689 #> 8724 TCGA-ER-A19M-06 1 1857 1 1857 NA NA 1 1152 #> 8725 TCGA-ER-A19N-06 1 1341 0 1341 NA NA 1 0 #> 8726 TCGA-ER-A19O-06 1 NA 1 NA NA NA 1 308 #> 8727 TCGA-ER-A19P-06 1 4930 1 4930 NA NA 1 4352 #> 8728 TCGA-ER-A19Q-06 1 1548 1 1548 NA NA 1 1259 #> 8729 TCGA-ER-A19S-06 0 1505 0 1505 NA NA 0 1505 #> 8730 TCGA-ER-A19T-06 1 270 1 270 NA NA 1 118 #> 8731 TCGA-ER-A19T-01 1 270 1 270 NA NA 1 118 #> 8732 TCGA-ER-A19W-06 1 4507 1 4507 NA NA 1 4126 #> 8733 TCGA-ER-A1A1-06 0 3196 0 3196 NA NA 1 1971 #> 8734 TCGA-ER-A2NB-01 1 857 1 857 NA NA 1 461 #> 8735 TCGA-ER-A2NC-06 1 1333 1 1333 NA NA 1 1157 #> 8736 TCGA-ER-A2ND-06 1 710 1 710 NA NA 1 710 #> 8737 TCGA-ER-A2NE-06 NA NA NA NA NA NA NA NA #> 8738 TCGA-ER-A2NF-06 1 877 1 877 NA NA 1 230 #> 8739 TCGA-ER-A2NF-01 1 877 1 877 NA NA 1 230 #> 8740 TCGA-ER-A2NG-06 1 1490 1 1490 NA NA 1 766 #> 8741 TCGA-ER-A2NH-06 0 1264 0 1264 NA NA 0 1264 #> 8742 TCGA-ER-A3ES-06 1 7514 1 7514 NA NA 1 7514 #> 8743 TCGA-ER-A3ET-06 1 2829 1 2829 NA NA 1 2435 #> 8744 TCGA-ER-A3EV-06 1 1429 1 1429 NA NA 1 728 #> 8745 TCGA-ER-A3PL-06 0 1010 0 1010 NA NA 1 945 #> 8746 TCGA-ER-A42H-01 1 426 1 426 NA NA 1 259 #> 8747 TCGA-ER-A42K-06 1 394 1 394 NA NA 1 206 #> 8748 TCGA-ER-A42L-06 0 4533 0 4533 NA NA 1 3812 #> 8749 TCGA-FR-A2OS-01 1 368 1 368 NA NA 1 283 #> 8750 TCGA-FR-A3R1-01 0 685 0 685 NA NA 1 678 #> 8751 TCGA-FR-A3YN-06 0 2828 0 2828 NA NA 0 2828 #> 8752 TCGA-FR-A3YO-06 0 NA 0 NA NA NA 0 NA #> 8753 TCGA-FR-A44A-06 0 5299 0 5299 NA NA 0 5299 #> 8754 TCGA-FR-A69P-06 0 478 0 478 NA NA 1 274 #> 8755 TCGA-FR-A726-01 1 305 1 305 NA NA 1 273 #> 8756 TCGA-FR-A728-01 0 583 0 583 NA NA 1 64 #> 8757 TCGA-FR-A729-06 0 6716 0 6716 NA NA 1 6299 #> 8758 TCGA-FR-A7U8-06 0 847 0 847 NA NA 1 567 #> 8759 TCGA-FR-A7U9-06 0 571 0 571 NA NA 1 95 #> 8760 TCGA-FR-A7UA-06 0 1164 0 1164 NA NA 0 1164 #> 8761 TCGA-FR-A8YC-06 1 1059 1 1059 NA NA 1 1059 #> 8762 TCGA-FR-A8YD-06 1 1103 1 1103 NA NA 1 1103 #> 8763 TCGA-FR-A8YE-06 0 3176 0 3176 NA NA 0 3176 #> 8764 TCGA-FS-A1YW-06 1 6598 1 6598 NA NA 1 6598 #> 8765 TCGA-FS-A1YX-06 1 1478 1 1478 NA NA 1 1478 #> 8766 TCGA-FS-A1YY-06 1 6953 1 6953 NA NA 1 6777 #> 8767 TCGA-FS-A1Z0-06 1 6164 1 6164 NA NA 1 5503 #> 8768 TCGA-FS-A1Z3-06 1 636 1 636 NA NA 1 276 #> 8769 TCGA-FS-A1Z4-06 1 854 1 854 NA NA 1 854 #> 8770 TCGA-FS-A1Z7-06 1 237 1 237 NA NA 1 136 #> 8771 TCGA-FS-A1ZA-06 1 843 1 843 NA NA 1 663 #> 8772 TCGA-FS-A1ZB-06 1 1486 1 1486 NA NA 1 1461 #> 8773 TCGA-FS-A1ZC-06 1 10870 1 10870 NA NA 1 10334 #> 8774 TCGA-FS-A1ZD-06 1 1628 1 1628 NA NA 1 1497 #> 8775 TCGA-FS-A1ZE-06 1 1413 1 1413 NA NA 1 761 #> 8776 TCGA-FS-A1ZF-06 1 470 1 470 NA NA 1 470 #> 8777 TCGA-FS-A1ZG-06 1 295 1 295 NA NA 1 140 #> 8778 TCGA-FS-A1ZH-06 1 996 1 996 NA NA 1 577 #> 8779 TCGA-FS-A1ZJ-06 1 1441 1 1441 NA NA 1 1225 #> 8780 TCGA-FS-A1ZK-06 1 728 1 728 NA NA 1 367 #> 8781 TCGA-FS-A1ZM-06 0 3080 0 3080 NA NA 0 3080 #> 8782 TCGA-FS-A1ZN-01 1 730 1 730 NA NA 1 361 #> 8783 TCGA-FS-A1ZP-06 1 2273 1 2273 NA NA 1 2273 #> 8784 TCGA-FS-A1ZQ-06 1 4062 1 4062 NA NA 1 3940 #> 8785 TCGA-FS-A1ZR-06 1 347 1 347 NA NA 1 152 #> 8786 TCGA-FS-A1ZS-06 0 4526 0 4526 NA NA 1 2861 #> 8787 TCGA-FS-A1ZT-06 0 1617 0 1617 NA NA 0 1617 #> 8788 TCGA-FS-A1ZU-06 1 808 1 808 NA NA 1 679 #> 8789 TCGA-FS-A1ZW-06 0 1505 0 1505 NA NA 0 1505 #> 8790 TCGA-FS-A1ZY-06 1 824 1 824 NA NA 1 824 #> 8791 TCGA-FS-A1ZZ-06 1 822 1 822 NA NA 1 822 #> 8792 TCGA-FS-A4F0-06 0 2367 0 2367 NA NA 1 872 #> 8793 TCGA-FS-A4F2-06 1 1525 1 1525 NA NA 1 1525 #> 8794 TCGA-FS-A4F4-06 1 2028 1 2028 NA NA 1 2028 #> 8795 TCGA-FS-A4F5-06 1 874 1 874 NA NA 1 874 #> 8796 TCGA-FS-A4F8-06 1 5318 1 5318 NA NA 1 5318 #> 8797 TCGA-FS-A4F9-06 0 1035 0 1035 NA NA 1 376 #> 8798 TCGA-FS-A4FB-06 1 813 1 813 NA NA 1 813 #> 8799 TCGA-FS-A4FC-06 1 1655 1 1655 NA NA 1 1655 #> 8800 TCGA-FS-A4FD-06 1 2454 1 2454 NA NA 1 2010 #> 8801 TCGA-FW-A3I3-06 0 531 0 531 NA NA 0 531 #> 8802 TCGA-FW-A3R5-06 0 1124 0 1124 NA NA 0 1124 #> 8803 TCGA-FW-A3TU-06 1 1691 1 1691 NA NA 1 1691 #> 8804 TCGA-FW-A3TV-06 0 411 0 411 NA NA 1 139 #> 8805 TCGA-FW-A5DX-01 0 640 0 640 NA NA 0 640 #> 8806 TCGA-FW-A5DY-06 0 587 0 587 NA NA 0 587 #> 8807 TCGA-GF-A2C7-01 0 21 0 21 NA NA 0 21 #> 8808 TCGA-GF-A3OT-06 0 301 0 301 NA NA 1 248 #> 8809 TCGA-GF-A4EO-06 0 591 0 591 NA NA 0 591 #> 8810 TCGA-GF-A6C8-06 0 62 0 62 NA NA 0 62 #> 8811 TCGA-GF-A6C9-06 0 480 0 480 NA NA 0 480 #> 8812 TCGA-GF-A769-01 1 1070 1 1070 NA NA 1 1070 #> 8813 TCGA-GN-A262-06 0 4255 0 4255 NA NA 1 2908 #> 8814 TCGA-GN-A263-01 1 467 1 467 NA NA 1 39 #> 8815 TCGA-GN-A264-06 1 3587 1 3587 NA NA 1 3221 #> 8816 TCGA-GN-A265-06 0 2948 0 2948 NA NA 1 99 #> 8817 TCGA-GN-A266-06 1 308 1 308 NA NA 1 109 #> 8818 TCGA-GN-A267-06 1 1960 1 1960 NA NA 1 456 #> 8819 TCGA-GN-A268-06 1 1910 1 1910 NA NA 1 908 #> 8820 TCGA-GN-A26A-06 1 988 1 988 NA NA 1 750 #> 8821 TCGA-GN-A26C-01 1 821 1 821 NA NA 1 593 #> 8822 TCGA-GN-A26D-06 1 1460 1 1460 NA NA 1 622 #> 8823 TCGA-GN-A4U3-06 0 3708 0 3708 NA NA 1 2274 #> 8824 TCGA-GN-A4U4-06 0 1197 0 1197 NA NA 1 217 #> 8825 TCGA-GN-A4U5-01 0 1156 0 1156 NA NA 0 1156 #> 8826 TCGA-GN-A4U7-06 1 317 1 317 NA NA 1 183 #> 8827 TCGA-GN-A4U8-06 0 1487 0 1487 NA NA 0 1487 #> 8828 TCGA-GN-A4U8-11 0 1487 0 1487 NA NA 0 1487 #> 8829 TCGA-GN-A4U9-06 1 673 1 673 NA NA 1 151 #> 8830 TCGA-GN-A8LK-06 1 1524 1 1524 NA NA 1 436 #> 8831 TCGA-GN-A8LL-06 1 650 1 650 NA NA 1 650 #> 8832 TCGA-GN-A8LN-01 0 772 0 772 NA NA 1 186 #> 8833 TCGA-GN-A9SD-06 1 1807 1 1807 NA NA 1 1137 #> 8834 TCGA-HR-A2OG-06 0 7 0 7 NA NA 0 7 #> 8835 TCGA-HR-A2OH-06 1 2004 1 2004 NA NA 1 2004 #> 8836 TCGA-HR-A5NC-01 0 1000 0 1000 NA NA 1 154 #> 8837 TCGA-IH-A3EA-01 0 524 0 524 NA NA 1 314 #> 8838 TCGA-LH-A9QB-06 0 11217 0 11217 NA NA 0 11217 #> 8839 TCGA-OD-A75X-06 1 9061 1 9061 NA NA 1 8987 #> 8840 TCGA-QB-A6FS-06 0 220 0 220 NA NA 1 63 #> 8841 TCGA-QB-AA9O-06 1 549 1 549 NA NA 1 549 #> 8842 TCGA-RP-A690-06 0 6 0 6 NA NA 0 6 #> 8843 TCGA-RP-A693-06 0 10 0 10 NA NA 0 10 #> 8844 TCGA-RP-A694-06 0 21 0 21 NA NA 0 21 #> 8845 TCGA-RP-A695-06 0 NA 0 NA NA NA 0 NA #> 8846 TCGA-RP-A6K9-06 0 NA 0 NA NA NA 0 NA #> 8847 TCGA-W3-A825-06 1 1917 1 1917 NA NA 1 1917 #> 8848 TCGA-W3-A828-06 1 3683 NA 3683 NA NA 0 3683 #> 8849 TCGA-W3-AA1O-06 1 122 1 122 NA NA 1 122 #> 8850 TCGA-W3-AA1Q-06 1 2101 1 2101 NA NA 1 1066 #> 8851 TCGA-W3-AA1R-06 1 3379 1 3379 NA NA 1 1037 #> 8852 TCGA-W3-AA1V-06 1 1280 1 1280 NA NA 1 1219 #> 8853 TCGA-W3-AA1W-06 0 6666 0 6666 NA NA 1 335 #> 8854 TCGA-W3-AA21-06 1 3195 1 3195 NA NA 1 2952 #> 8855 TCGA-WE-A8JZ-06 0 731 0 731 NA NA 0 731 #> 8856 TCGA-WE-A8K1-06 0 1492 0 1492 NA NA 0 1492 #> 8857 TCGA-WE-A8K4-01 0 614 0 614 NA NA 0 614 #> 8858 TCGA-WE-A8K5-06 1 1860 1 1860 NA NA 1 1498 #> 8859 TCGA-WE-A8K6-06 0 546 0 546 NA NA 1 256 #> 8860 TCGA-WE-A8ZM-06 0 3082 0 3082 NA NA 1 646 #> 8861 TCGA-WE-A8ZN-06 0 1794 0 1794 NA NA 1 1449 #> 8862 TCGA-WE-A8ZO-06 0 2145 0 2145 NA NA 1 1371 #> 8863 TCGA-WE-A8ZQ-06 0 1923 0 1923 NA NA 1 1757 #> 8864 TCGA-WE-A8ZR-06 1 274 1 274 NA NA 1 126 #> 8865 TCGA-WE-A8ZT-06 0 359 0 359 NA NA 1 69 #> 8866 TCGA-WE-A8ZX-06 0 1089 0 1089 NA NA 1 326 #> 8867 TCGA-WE-A8ZY-06 1 1506 1 1506 NA NA 1 1389 #> 8868 TCGA-WE-AA9Y-06 0 370 0 370 NA NA 0 370 #> 8869 TCGA-WE-AAA0-06 0 1229 0 1229 NA NA 1 650 #> 8870 TCGA-WE-AAA3-06 0 651 0 651 NA NA 0 651 #> 8871 TCGA-WE-AAA4-06 0 760 0 760 NA NA 1 523 #> 8872 TCGA-XV-A9VZ-01 0 11 0 11 NA NA 0 11 #> 8873 TCGA-XV-A9W2-01 0 417 0 417 NA NA 0 417 #> 8874 TCGA-XV-A9W5-01 0 392 0 392 NA NA 0 392 #> 8875 TCGA-XV-AAZV-01 0 412 0 412 NA NA 0 412 #> 8876 TCGA-XV-AAZW-01 1 393 1 393 NA NA 1 393 #> 8877 TCGA-XV-AAZY-01 0 405 0 405 NA NA 0 405 #> 8878 TCGA-XV-AB01-06 0 403 0 403 NA NA 0 403 #> 8879 TCGA-YD-A89C-06 0 210 0 210 NA NA 0 210 #> 8880 TCGA-YD-A9TA-06 0 1496 0 1496 NA NA 0 1496 #> 8881 TCGA-YD-A9TB-06 0 NA 0 NA NA NA 0 NA #> 8882 TCGA-YG-AA3N-01 0 306 0 306 NA NA 0 306 #> 8883 TCGA-YG-AA3O-06 1 1154 1 1154 NA NA 1 999 #> 8884 TCGA-YG-AA3P-06 0 439 0 439 NA NA 0 439 #> 8885 TCGA-Z2-A8RT-06 0 839 0 839 NA NA 0 839 #> 8886 TCGA-Z2-AA3S-06 0 2950 0 2950 NA NA 1 2727 #> 8887 TCGA-Z2-AA3V-06 0 486 0 486 NA NA 0 486 #> 8888 TCGA-3M-AB46-01 0 1765 0 1765 0 1765 0 1765 #> 8889 TCGA-3M-AB47-01 1 NA 1 NA NA NA 1 395 #> 8890 TCGA-B7-5816-01 0 812 0 812 0 812 0 812 #> 8891 TCGA-B7-5818-01 0 356 0 356 NA NA 0 356 #> 8892 TCGA-B7-A5TI-01 0 595 0 595 0 595 0 595 #> 8893 TCGA-B7-A5TJ-01 0 335 0 335 0 335 0 335 #> 8894 TCGA-B7-A5TK-01 0 288 0 288 0 288 0 288 #> 8895 TCGA-B7-A5TN-01 0 287 0 287 0 287 0 287 #> 8896 TCGA-BR-4187-01 1 141 NA 141 NA NA 0 141 #> 8897 TCGA-BR-4191-01 1 558 NA 558 NA NA 0 558 #> 8898 TCGA-BR-4201-01 1 940 NA 940 NA NA 0 940 #> 8899 TCGA-BR-4253-01 1 124 NA 124 NA NA 0 124 #> 8900 TCGA-BR-4255-01 1 124 NA 124 NA NA 0 124 #> 8901 TCGA-BR-4256-01 1 284 NA 284 NA NA 0 284 #> 8902 TCGA-BR-4257-01 1 294 NA 294 NA NA 0 294 #> 8903 TCGA-BR-4267-01 1 188 NA 188 NA NA 0 188 #> 8904 TCGA-BR-4279-01 1 291 NA 291 NA NA 0 291 #> 8905 TCGA-BR-4280-01 1 201 NA 201 NA NA 0 201 #> 8906 TCGA-BR-4292-01 0 0 0 0 NA NA 0 0 #> 8907 TCGA-BR-4294-01 0 0 0 0 NA NA 0 0 #> 8908 TCGA-BR-4357-01 0 0 0 0 NA NA 0 0 #> 8909 TCGA-BR-4361-01 0 0 0 0 NA NA 0 0 #> 8910 TCGA-BR-4362-01 0 0 0 0 NA NA 0 0 #> 8911 TCGA-BR-4363-01 0 0 0 0 NA NA 0 0 #> 8912 TCGA-BR-4366-01 0 0 0 0 NA NA 0 0 #> 8913 TCGA-BR-4367-01 0 0 0 0 NA NA 0 0 #> 8914 TCGA-BR-4368-01 0 0 0 0 NA NA 0 0 #> 8915 TCGA-BR-4369-01 0 0 0 0 NA NA 0 0 #> 8916 TCGA-BR-4370-01 0 0 0 0 NA NA 0 0 #> 8917 TCGA-BR-4371-01 0 0 0 0 NA NA 0 0 #> 8918 TCGA-BR-6452-01 0 1055 0 1055 0 1055 0 1055 #> 8919 TCGA-BR-6453-01 0 485 0 485 0 485 0 485 #> 8920 TCGA-BR-6453-11 0 485 0 485 0 485 0 485 #> 8921 TCGA-BR-6454-01 0 0 0 0 NA NA 0 0 #> 8922 TCGA-BR-6454-11 0 0 0 0 NA NA 0 0 #> 8923 TCGA-BR-6455-01 1 422 1 422 NA NA 1 385 #> 8924 TCGA-BR-6456-01 1 526 0 526 0 526 0 526 #> 8925 TCGA-BR-6457-01 0 416 0 416 0 416 0 416 #> 8926 TCGA-BR-6457-11 0 416 0 416 0 416 0 416 #> 8927 TCGA-BR-6458-01 1 588 1 588 1 574 1 574 #> 8928 TCGA-BR-6458-11 1 588 1 588 1 574 1 574 #> 8929 TCGA-BR-6563-01 0 1190 0 1190 0 1190 1 148 #> 8930 TCGA-BR-6564-01 1 794 0 794 0 794 0 794 #> 8931 TCGA-BR-6564-11 1 794 0 794 0 794 0 794 #> 8932 TCGA-BR-6565-01 1 279 1 279 NA NA 1 279 #> 8933 TCGA-BR-6566-01 0 997 0 997 0 997 0 997 #> 8934 TCGA-BR-6705-01 1 779 1 779 NA NA 1 779 #> 8935 TCGA-BR-6706-01 1 549 1 549 1 402 1 402 #> 8936 TCGA-BR-6707-01 0 491 0 491 1 426 1 426 #> 8937 TCGA-BR-6709-01 1 370 1 370 NA NA 1 370 #> 8938 TCGA-BR-6710-01 0 273 0 273 0 273 0 273 #> 8939 TCGA-BR-6801-01 0 1223 0 1223 0 1223 0 1223 #> 8940 TCGA-BR-6802-01 0 940 0 940 1 807 1 807 #> 8941 TCGA-BR-6802-11 0 940 0 940 1 807 1 807 #> 8942 TCGA-BR-6803-01 0 949 0 949 0 949 0 949 #> 8943 TCGA-BR-6852-01 0 1367 0 1367 0 1367 0 1367 #> 8944 TCGA-BR-6852-11 0 1367 0 1367 0 1367 0 1367 #> 8945 TCGA-BR-7196-01 0 666 0 666 NA NA 1 348 #> 8946 TCGA-BR-7197-01 0 280 0 280 0 280 0 280 #> 8947 TCGA-BR-7703-01 0 1100 0 1100 0 1100 0 1100 #> 8948 TCGA-BR-7703-11 0 1100 0 1100 0 1100 0 1100 #> 8949 TCGA-BR-7704-01 0 1072 0 1072 0 1072 0 1072 #> 8950 TCGA-BR-7704-11 0 1072 0 1072 0 1072 0 1072 #> 8951 TCGA-BR-7707-01 0 1090 0 1090 0 1090 0 1090 #> 8952 TCGA-BR-7715-01 0 1023 0 1023 0 1023 0 1023 #> 8953 TCGA-BR-7715-11 0 1023 0 1023 0 1023 0 1023 #> 8954 TCGA-BR-7716-01 0 1210 0 1210 0 1210 0 1210 #> 8955 TCGA-BR-7716-11 0 1210 0 1210 0 1210 0 1210 #> 8956 TCGA-BR-7717-01 1 552 0 552 NA NA 0 552 #> 8957 TCGA-BR-7717-11 1 552 0 552 NA NA 0 552 #> 8958 TCGA-BR-7722-01 1 466 0 466 0 466 0 466 #> 8959 TCGA-BR-7723-01 1 874 1 874 1 559 1 559 #> 8960 TCGA-BR-7851-01 1 NA 0 NA 0 NA 0 NA #> 8961 TCGA-BR-7851-11 1 NA 0 NA 0 NA 0 NA #> 8962 TCGA-BR-7901-01 1 105 0 105 1 91 1 91 #> 8963 TCGA-BR-7957-01 1 276 0 276 NA NA 0 276 #> 8964 TCGA-BR-7958-01 0 899 0 899 0 899 0 899 #> 8965 TCGA-BR-7959-01 0 1010 0 1010 0 1010 0 1010 #> 8966 TCGA-BR-8058-01 0 1133 0 1133 0 1133 1 89 #> 8967 TCGA-BR-8059-01 1 439 0 439 0 439 0 439 #> 8968 TCGA-BR-8060-01 1 348 0 348 0 348 0 348 #> 8969 TCGA-BR-8060-11 1 348 0 348 0 348 0 348 #> 8970 TCGA-BR-8077-01 0 21 0 21 0 21 0 21 #> 8971 TCGA-BR-8078-01 0 900 0 900 0 900 0 900 #> 8972 TCGA-BR-8080-01 1 292 0 292 0 292 0 292 #> 8973 TCGA-BR-8081-01 0 981 0 981 0 981 0 981 #> 8974 TCGA-BR-8284-01 1 245 0 245 0 245 0 245 #> 8975 TCGA-BR-8286-01 0 895 0 895 0 895 0 895 #> 8976 TCGA-BR-8289-01 1 81 0 81 NA NA 0 81 #> 8977 TCGA-BR-8291-01 1 607 0 607 0 607 0 607 #> 8978 TCGA-BR-8295-01 1 67 1 67 NA NA 1 67 #> 8979 TCGA-BR-8296-01 1 474 1 474 NA NA 1 390 #> 8980 TCGA-BR-8297-01 0 225 0 225 NA NA 0 225 #> 8981 TCGA-BR-8361-01 0 946 0 946 0 946 0 946 #> 8982 TCGA-BR-8362-01 1 398 1 398 1 356 1 356 #> 8983 TCGA-BR-8363-01 1 8 0 8 0 8 0 8 #> 8984 TCGA-BR-8364-01 0 675 0 675 0 675 0 675 #> 8985 TCGA-BR-8365-01 1 533 1 533 NA NA 1 533 #> 8986 TCGA-BR-8366-01 0 29 0 29 0 29 0 29 #> 8987 TCGA-BR-8367-01 1 801 1 801 1 580 1 580 #> 8988 TCGA-BR-8368-01 0 131 0 131 0 131 0 131 #> 8989 TCGA-BR-8369-01 0 427 0 427 1 419 1 419 #> 8990 TCGA-BR-8371-01 1 359 1 359 NA NA 1 357 #> 8991 TCGA-BR-8372-01 0 951 0 951 0 951 0 951 #> 8992 TCGA-BR-8373-01 0 450 0 450 0 450 0 450 #> 8993 TCGA-BR-8380-01 0 21 0 21 1 467 1 467 #> 8994 TCGA-BR-8381-01 0 224 0 224 0 224 0 224 #> 8995 TCGA-BR-8382-01 1 762 0 762 0 762 0 762 #> 8996 TCGA-BR-8384-01 0 113 0 113 0 113 0 113 #> 8997 TCGA-BR-8483-01 0 164 0 164 NA NA 0 164 #> 8998 TCGA-BR-8484-01 1 766 0 766 0 766 0 766 #> 8999 TCGA-BR-8485-01 0 280 0 280 0 280 0 280 #> 9000 TCGA-BR-8486-01 0 615 0 615 0 615 0 615 #> 9001 TCGA-BR-8487-01 0 34 0 34 0 34 0 34 #> 9002 TCGA-BR-8588-01 0 389 0 389 0 389 0 389 #> 9003 TCGA-BR-8589-01 0 825 0 825 0 825 0 825 #> 9004 TCGA-BR-8590-01 1 284 1 284 1 223 1 223 #> 9005 TCGA-BR-8591-01 0 856 0 856 0 856 0 856 #> 9006 TCGA-BR-8592-01 1 191 0 191 0 191 0 191 #> 9007 TCGA-BR-8676-01 0 229 0 229 0 229 0 229 #> 9008 TCGA-BR-8677-01 0 813 0 813 0 813 0 813 #> 9009 TCGA-BR-8678-01 0 754 0 754 0 754 0 754 #> 9010 TCGA-BR-8679-01 0 0 0 0 0 0 0 0 #> 9011 TCGA-BR-8680-01 0 972 0 972 NA NA 0 972 #> 9012 TCGA-BR-8682-01 0 991 0 991 0 991 0 991 #> 9013 TCGA-BR-8683-01 1 300 0 300 0 300 0 300 #> 9014 TCGA-BR-8686-01 1 635 0 635 0 635 0 635 #> 9015 TCGA-BR-8687-01 1 250 1 250 NA NA 1 250 #> 9016 TCGA-BR-8690-01 0 325 0 325 0 325 0 325 #> 9017 TCGA-BR-A44T-01 0 1038 0 1038 1 682 1 682 #> 9018 TCGA-BR-A44U-01 1 422 0 422 0 422 0 422 #> 9019 TCGA-BR-A452-01 1 229 0 229 0 229 0 229 #> 9020 TCGA-BR-A453-01 1 185 0 185 NA NA 0 185 #> 9021 TCGA-BR-A4CR-01 0 0 0 0 0 0 0 0 #> 9022 TCGA-BR-A4CS-01 1 45 0 45 0 45 0 45 #> 9023 TCGA-BR-A4IU-01 0 838 0 838 0 838 0 838 #> 9024 TCGA-BR-A4IV-01 1 869 1 869 1 737 1 737 #> 9025 TCGA-BR-A4IY-01 0 392 0 392 0 392 0 392 #> 9026 TCGA-BR-A4IZ-01 1 273 0 273 NA NA 0 273 #> 9027 TCGA-BR-A4J1-01 1 22 NA 22 NA NA 0 22 #> 9028 TCGA-BR-A4J2-01 0 431 0 431 0 431 0 431 #> 9029 TCGA-BR-A4J4-01 0 16 0 16 NA NA 0 16 #> 9030 TCGA-BR-A4J5-01 0 862 0 862 0 862 0 862 #> 9031 TCGA-BR-A4J6-01 0 20 0 20 0 20 0 20 #> 9032 TCGA-BR-A4J7-01 0 989 0 989 0 989 0 989 #> 9033 TCGA-BR-A4J8-01 0 411 0 411 0 411 0 411 #> 9034 TCGA-BR-A4J9-01 0 14 0 14 0 14 0 14 #> 9035 TCGA-BR-A4PD-01 0 628 0 628 0 628 0 628 #> 9036 TCGA-BR-A4PE-01 0 621 0 621 0 621 0 621 #> 9037 TCGA-BR-A4PF-01 0 35 0 35 0 35 0 35 #> 9038 TCGA-BR-A4QI-01 1 652 1 652 1 383 1 383 #> 9039 TCGA-BR-A4QL-01 1 491 0 491 0 491 0 491 #> 9040 TCGA-BR-A4QM-01 0 156 0 156 1 127 1 127 #> 9041 TCGA-CD-5798-01 0 408 0 408 0 408 0 408 #> 9042 TCGA-CD-5799-01 0 396 0 396 0 396 0 396 #> 9043 TCGA-CD-5800-01 0 400 0 400 0 400 0 400 #> 9044 TCGA-CD-5801-01 1 401 1 401 NA NA 1 401 #> 9045 TCGA-CD-5803-01 1 341 1 341 NA NA 1 300 #> 9046 TCGA-CD-5804-01 0 368 0 368 0 368 0 368 #> 9047 TCGA-CD-5813-01 1 377 1 377 1 315 1 315 #> 9048 TCGA-CD-8524-01 0 388 0 388 1 69 1 69 #> 9049 TCGA-CD-8525-01 0 383 0 383 0 383 0 383 #> 9050 TCGA-CD-8526-01 0 381 0 381 0 381 0 381 #> 9051 TCGA-CD-8527-01 1 218 1 218 1 159 1 159 #> 9052 TCGA-CD-8528-01 0 375 0 375 0 375 0 375 #> 9053 TCGA-CD-8529-01 0 374 0 374 NA NA 0 374 #> 9054 TCGA-CD-8530-01 0 377 0 377 0 377 0 377 #> 9055 TCGA-CD-8531-01 0 383 0 383 0 383 0 383 #> 9056 TCGA-CD-8532-01 1 354 1 354 1 282 1 282 #> 9057 TCGA-CD-8533-01 0 468 0 468 1 226 1 226 #> 9058 TCGA-CD-8534-01 0 367 0 367 NA NA 1 201 #> 9059 TCGA-CD-8535-01 0 390 0 390 0 390 0 390 #> 9060 TCGA-CD-8536-01 0 378 0 378 0 378 0 378 #> 9061 TCGA-CD-A486-01 1 192 1 192 1 79 1 79 #> 9062 TCGA-CD-A489-01 1 344 1 344 1 277 1 277 #> 9063 TCGA-CD-A48A-01 0 378 0 378 0 378 0 378 #> 9064 TCGA-CD-A48C-01 1 353 1 353 1 230 1 230 #> 9065 TCGA-CD-A4MG-01 1 200 1 200 1 74 1 74 #> 9066 TCGA-CD-A4MH-01 0 371 0 371 0 371 0 371 #> 9067 TCGA-CD-A4MI-01 1 358 1 358 1 271 1 271 #> 9068 TCGA-CD-A4MJ-01 0 384 0 384 1 69 1 69 #> 9069 TCGA-CG-4301-01 0 92 0 92 NA NA 0 92 #> 9070 TCGA-CG-4304-01 0 NA 0 NA NA NA 0 NA #> 9071 TCGA-CG-4305-01 0 485 0 485 NA NA 1 457 #> 9072 TCGA-CG-4306-01 1 31 NA 31 NA NA 0 31 #> 9073 TCGA-CG-4436-01 0 243 0 243 0 243 0 243 #> 9074 TCGA-CG-4437-01 0 245 0 245 0 245 0 245 #> 9075 TCGA-CG-4438-01 0 1645 0 1645 NA NA 0 1645 #> 9076 TCGA-CG-4440-01 1 122 NA 122 NA NA 0 122 #> 9077 TCGA-CG-4441-01 1 426 NA 426 NA NA 0 426 #> 9078 TCGA-CG-4442-01 0 0 0 0 NA NA 0 0 #> 9079 TCGA-CG-4443-01 0 912 0 912 NA NA 0 912 #> 9080 TCGA-CG-4444-01 0 1431 0 1431 0 1431 0 1431 #> 9081 TCGA-CG-4449-01 0 580 0 580 NA NA 1 336 #> 9082 TCGA-CG-4460-01 1 669 1 669 NA NA 1 487 #> 9083 TCGA-CG-4462-01 1 0 1 0 NA NA 1 0 #> 9084 TCGA-CG-4465-01 1 274 NA 274 NA NA 0 274 #> 9085 TCGA-CG-4466-01 0 577 0 577 0 577 0 577 #> 9086 TCGA-CG-4469-01 1 215 NA 215 NA NA 0 215 #> 9087 TCGA-CG-4472-01 0 365 0 365 NA NA 1 122 #> 9088 TCGA-CG-4474-01 0 0 0 0 NA NA 0 0 #> 9089 TCGA-CG-4475-01 0 699 0 699 NA NA 0 699 #> 9090 TCGA-CG-4476-01 0 0 0 0 NA NA 0 0 #> 9091 TCGA-CG-4477-01 0 942 0 942 NA NA 1 365 #> 9092 TCGA-CG-5716-01 0 0 0 0 NA NA 0 0 #> 9093 TCGA-CG-5717-01 1 212 1 212 NA NA 1 120 #> 9094 TCGA-CG-5718-01 1 1095 0 1095 NA NA 0 1095 #> 9095 TCGA-CG-5719-01 0 31 0 31 NA NA 0 31 #> 9096 TCGA-CG-5720-01 1 30 0 30 NA NA 0 30 #> 9097 TCGA-CG-5720-11 1 30 0 30 NA NA 0 30 #> 9098 TCGA-CG-5721-01 0 183 0 183 NA NA 0 183 #> 9099 TCGA-CG-5722-01 0 30 0 30 NA NA 0 30 #> 9100 TCGA-CG-5722-11 0 30 0 30 NA NA 0 30 #> 9101 TCGA-CG-5723-01 0 3196 0 3196 NA NA 0 3196 #> 9102 TCGA-CG-5724-01 1 366 1 366 NA NA 1 122 #> 9103 TCGA-CG-5725-01 1 457 1 457 NA NA 1 153 #> 9104 TCGA-CG-5726-01 1 881 0 881 NA NA 0 881 #> 9105 TCGA-CG-5728-11 0 1980 0 1980 NA NA 0 1980 #> 9106 TCGA-CG-5730-11 0 122 0 122 NA NA 0 122 #> 9107 TCGA-CG-5732-01 1 2100 1 2100 NA NA 1 1949 #> 9108 TCGA-CG-5733-11 1 641 1 641 NA NA 1 427 #> 9109 TCGA-CG-5734-01 1 243 NA 243 NA NA 0 243 #> 9110 TCGA-CG-5734-11 1 243 NA 243 NA NA 0 243 #> 9111 TCGA-D7-5577-01 1 782 1 782 NA NA 1 376 #> 9112 TCGA-D7-5578-01 0 385 0 385 NA NA 0 385 #> 9113 TCGA-D7-6518-01 0 582 0 582 0 582 0 582 #> 9114 TCGA-D7-6519-01 0 625 0 625 NA NA 1 429 #> 9115 TCGA-D7-6520-01 0 573 0 573 NA NA 1 46 #> 9116 TCGA-D7-6521-01 0 564 0 564 NA NA 1 192 #> 9117 TCGA-D7-6522-01 0 566 0 566 0 566 0 566 #> 9118 TCGA-D7-6524-01 0 543 0 543 NA NA 1 543 #> 9119 TCGA-D7-6525-01 1 406 1 406 NA NA 1 171 #> 9120 TCGA-D7-6526-01 0 523 0 523 0 523 0 523 #> 9121 TCGA-D7-6527-01 1 312 1 312 NA NA 1 75 #> 9122 TCGA-D7-6528-01 0 463 0 463 0 463 0 463 #> 9123 TCGA-D7-6815-01 0 486 0 486 0 486 0 486 #> 9124 TCGA-D7-6817-01 0 389 0 389 NA NA 0 389 #> 9125 TCGA-D7-6818-01 1 376 1 376 NA NA 1 247 #> 9126 TCGA-D7-6820-01 0 344 0 344 0 344 0 344 #> 9127 TCGA-D7-6822-01 0 375 0 375 0 375 0 375 #> 9128 TCGA-D7-8570-01 0 752 0 752 0 752 0 752 #> 9129 TCGA-D7-8572-01 0 511 0 511 0 511 0 511 #> 9130 TCGA-D7-8573-01 0 593 0 593 0 593 0 593 #> 9131 TCGA-D7-8574-01 0 523 0 523 0 523 0 523 #> 9132 TCGA-D7-8575-01 1 554 1 554 1 427 1 427 #> 9133 TCGA-D7-8576-01 1 446 1 446 1 204 1 204 #> 9134 TCGA-D7-8578-01 0 643 0 643 1 451 1 451 #> 9135 TCGA-D7-8579-01 0 636 0 636 0 636 0 636 #> 9136 TCGA-D7-A4YT-01 0 434 0 434 0 434 0 434 #> 9137 TCGA-D7-A4YU-01 0 500 0 500 NA NA 0 500 #> 9138 TCGA-D7-A4YV-01 1 180 0 180 0 180 0 180 #> 9139 TCGA-D7-A4YX-01 0 1108 0 1108 0 1108 0 1108 #> 9140 TCGA-D7-A4YY-01 0 419 0 419 NA NA 0 419 #> 9141 TCGA-D7-A4Z0-01 0 449 0 449 0 449 0 449 #> 9142 TCGA-D7-A6EV-01 0 342 0 342 0 342 0 342 #> 9143 TCGA-D7-A6EX-01 0 344 0 344 0 344 0 344 #> 9144 TCGA-D7-A6EY-01 1 348 1 348 NA NA 1 348 #> 9145 TCGA-D7-A6EZ-01 1 618 1 618 NA NA 1 618 #> 9146 TCGA-D7-A6F0-01 0 678 0 678 0 678 0 678 #> 9147 TCGA-D7-A6F2-01 0 476 0 476 0 476 0 476 #> 9148 TCGA-D7-A747-01 1 255 1 255 NA NA 1 255 #> 9149 TCGA-D7-A748-01 1 132 1 132 NA NA 1 99 #> 9150 TCGA-D7-A74A-01 0 607 0 607 0 607 0 607 #> 9151 TCGA-EQ-8122-01 1 243 NA 243 NA NA 0 243 #> 9152 TCGA-EQ-A4SO-01 0 494 0 494 0 494 0 494 #> 9153 TCGA-F1-6177-01 0 200 0 200 0 200 0 200 #> 9154 TCGA-F1-6874-01 0 440 0 440 0 440 0 440 #> 9155 TCGA-F1-6875-01 1 2197 0 2197 0 2197 0 2197 #> 9156 TCGA-F1-A448-01 0 647 0 647 0 647 0 647 #> 9157 TCGA-F1-A72C-01 0 346 0 346 1 343 1 343 #> 9158 TCGA-FP-7735-01 1 106 0 106 0 106 0 106 #> 9159 TCGA-FP-7735-11 1 106 0 106 0 106 0 106 #> 9160 TCGA-FP-7829-01 0 594 0 594 0 594 0 594 #> 9161 TCGA-FP-7829-11 0 594 0 594 0 594 0 594 #> 9162 TCGA-FP-7916-01 1 428 1 428 NA NA 1 428 #> 9163 TCGA-FP-7998-01 0 678 0 678 0 678 0 678 #> 9164 TCGA-FP-8099-01 0 519 0 519 0 519 0 519 #> 9165 TCGA-FP-8209-01 1 1811 1 1811 1 1676 1 1676 #> 9166 TCGA-FP-8210-01 1 153 1 153 NA NA 1 153 #> 9167 TCGA-FP-8211-01 0 413 0 413 0 413 0 413 #> 9168 TCGA-FP-8631-01 0 17 0 17 NA NA 0 17 #> 9169 TCGA-FP-A4BE-01 0 337 0 337 0 337 0 337 #> 9170 TCGA-FP-A4BF-01 1 168 1 168 NA NA 1 159 #> 9171 TCGA-FP-A8CX-01 0 7 0 7 NA NA 0 7 #> 9172 TCGA-FP-A9TM-01 0 189 0 189 0 189 0 189 #> 9173 TCGA-HF-7131-01 0 NA 0 NA 0 NA 0 NA #> 9174 TCGA-HF-7132-01 0 2351 0 2351 0 2351 0 2351 #> 9175 TCGA-HF-7133-01 0 1918 0 1918 NA NA 0 1918 #> 9176 TCGA-HF-7134-01 0 1588 0 1588 0 1588 0 1588 #> 9177 TCGA-HF-7136-01 0 NA 0 NA NA NA 0 NA #> 9178 TCGA-HF-A5NB-01 0 928 0 928 0 928 0 928 #> 9179 TCGA-HJ-7597-01 1 805 1 805 1 231 1 231 #> 9180 TCGA-HU-8238-01 0 46 0 46 0 46 0 46 #> 9181 TCGA-HU-8238-11 0 46 0 46 0 46 0 46 #> 9182 TCGA-HU-8243-01 1 180 1 180 NA NA 1 132 #> 9183 TCGA-HU-8244-01 0 742 0 742 0 742 0 742 #> 9184 TCGA-HU-8249-01 0 881 0 881 0 881 0 881 #> 9185 TCGA-HU-8602-01 0 679 0 679 0 679 0 679 #> 9186 TCGA-HU-8604-01 0 694 0 694 0 694 0 694 #> 9187 TCGA-HU-8608-01 0 641 0 641 1 277 1 277 #> 9188 TCGA-HU-8610-01 0 23 0 23 NA NA 0 23 #> 9189 TCGA-HU-A4G2-01 0 739 0 739 0 739 0 739 #> 9190 TCGA-HU-A4G3-01 0 170 0 170 NA NA 0 170 #> 9191 TCGA-HU-A4G3-11 0 170 0 170 NA NA 0 170 #> 9192 TCGA-HU-A4G6-01 0 738 0 738 0 738 0 738 #> 9193 TCGA-HU-A4G8-01 0 690 0 690 0 690 0 690 #> 9194 TCGA-HU-A4G9-01 0 736 0 736 NA NA 0 736 #> 9195 TCGA-HU-A4GC-01 0 99 0 99 NA NA 0 99 #> 9196 TCGA-HU-A4GC-11 0 99 0 99 NA NA 0 99 #> 9197 TCGA-HU-A4GD-01 0 692 0 692 NA NA 1 399 #> 9198 TCGA-HU-A4GF-01 0 785 0 785 0 785 0 785 #> 9199 TCGA-HU-A4GH-01 0 358 0 358 0 358 0 358 #> 9200 TCGA-HU-A4GH-11 0 358 0 358 0 358 0 358 #> 9201 TCGA-HU-A4GJ-01 0 650 0 650 NA NA 1 547 #> 9202 TCGA-HU-A4GN-01 0 912 0 912 1 168 1 168 #> 9203 TCGA-HU-A4GN-11 0 912 0 912 1 168 1 168 #> 9204 TCGA-HU-A4GP-01 0 273 0 273 0 273 0 273 #> 9205 TCGA-HU-A4GP-11 0 273 0 273 0 273 0 273 #> 9206 TCGA-HU-A4GQ-01 1 3 1 3 0 3 0 3 #> 9207 TCGA-HU-A4GT-01 0 198 0 198 0 198 0 198 #> 9208 TCGA-HU-A4GU-01 0 200 0 200 0 200 0 200 #> 9209 TCGA-HU-A4GX-01 0 616 0 616 0 616 0 616 #> 9210 TCGA-HU-A4GY-01 0 8 0 8 NA NA 0 8 #> 9211 TCGA-HU-A4GY-11 0 8 0 8 NA NA 0 8 #> 9212 TCGA-HU-A4H0-01 0 64 0 64 0 64 0 64 #> 9213 TCGA-HU-A4H2-01 0 394 0 394 0 394 0 394 #> 9214 TCGA-HU-A4H3-01 0 882 0 882 NA NA 1 410 #> 9215 TCGA-HU-A4H4-01 0 725 0 725 0 725 0 725 #> 9216 TCGA-HU-A4H5-01 0 724 0 724 0 724 0 724 #> 9217 TCGA-HU-A4H6-01 0 644 0 644 0 644 0 644 #> 9218 TCGA-HU-A4H8-01 0 428 NA 428 1 354 1 354 #> 9219 TCGA-HU-A4HB-01 1 477 1 477 1 390 1 390 #> 9220 TCGA-HU-A4HB-11 1 477 1 477 1 390 1 390 #> 9221 TCGA-HU-A4HD-01 0 1016 0 1016 NA NA 0 1016 #> 9222 TCGA-IN-7806-01 0 1106 0 1106 0 1106 0 1106 #> 9223 TCGA-IN-7806-11 0 1106 0 1106 0 1106 0 1106 #> 9224 TCGA-IN-7808-01 1 105 1 105 NA NA 1 105 #> 9225 TCGA-IN-8462-01 0 572 0 572 NA NA 1 270 #> 9226 TCGA-IN-8462-11 0 572 0 572 NA NA 1 270 #> 9227 TCGA-IN-8663-01 1 103 0 103 NA NA 0 103 #> 9228 TCGA-IN-8663-11 1 103 0 103 NA NA 0 103 #> 9229 TCGA-IN-A6RI-01 0 559 0 559 0 559 0 559 #> 9230 TCGA-IN-A6RJ-01 0 379 0 379 0 379 0 379 #> 9231 TCGA-IN-A6RL-01 1 406 1 406 1 307 1 307 #> 9232 TCGA-IN-A6RO-01 1 NA 1 NA NA NA 1 154 #> 9233 TCGA-IN-A6RR-01 1 205 0 205 NA NA 0 205 #> 9234 TCGA-IN-A6RS-01 0 383 0 383 0 383 0 383 #> 9235 TCGA-IN-A7NR-01 0 198 0 198 NA NA 0 198 #> 9236 TCGA-IN-A7NT-01 0 323 0 323 0 323 0 323 #> 9237 TCGA-IN-A7NU-01 0 356 0 356 NA NA 1 337 #> 9238 TCGA-IN-AB1V-01 0 479 0 479 0 479 0 479 #> 9239 TCGA-IN-AB1V-11 0 479 0 479 0 479 0 479 #> 9240 TCGA-IN-AB1X-01 0 411 0 411 0 411 0 411 #> 9241 TCGA-IN-AB1X-11 0 411 0 411 0 411 0 411 #> 9242 TCGA-IP-7968-01 0 77 0 77 NA NA 0 77 #> 9243 TCGA-IP-7968-11 0 77 0 77 NA NA 0 77 #> 9244 TCGA-KB-A6F7-01 0 1935 0 1935 0 1935 0 1935 #> 9245 TCGA-KB-A93G-01 0 613 0 613 0 613 0 613 #> 9246 TCGA-KB-A93H-01 0 1145 0 1145 0 1145 0 1145 #> 9247 TCGA-KB-A93J-01 0 1124 0 1124 0 1124 0 1124 #> 9248 TCGA-MX-A5UG-01 1 113 1 113 NA NA 0 113 #> 9249 TCGA-MX-A5UJ-01 0 600 0 600 0 600 0 600 #> 9250 TCGA-MX-A663-01 1 300 1 300 1 218 1 218 #> 9251 TCGA-MX-A666-01 0 427 0 427 NA NA 0 427 #> 9252 TCGA-R5-A7O7-01 0 1389 0 1389 NA NA 0 1389 #> 9253 TCGA-R5-A7ZE-01 1 554 1 554 NA NA 1 554 #> 9254 TCGA-R5-A7ZF-01 1 259 1 259 NA NA 1 259 #> 9255 TCGA-R5-A7ZI-01 0 2267 0 2267 NA NA 0 2267 #> 9256 TCGA-R5-A7ZR-01 1 185 1 185 NA NA 1 185 #> 9257 TCGA-R5-A805-01 1 281 1 281 NA NA 1 281 #> 9258 TCGA-RD-A7BS-01 1 336 1 336 1 244 1 244 #> 9259 TCGA-RD-A7BT-01 1 262 1 262 NA NA 1 123 #> 9260 TCGA-RD-A7BW-01 1 156 0 156 0 156 0 156 #> 9261 TCGA-RD-A7C1-01 1 507 1 507 1 438 1 438 #> 9262 TCGA-RD-A8MV-01 0 3720 0 3720 0 3720 0 3720 #> 9263 TCGA-RD-A8MW-01 1 1153 1 1153 1 98 1 98 #> 9264 TCGA-RD-A8N0-01 0 1236 0 1236 0 1236 0 1236 #> 9265 TCGA-RD-A8N1-01 0 3519 0 3519 0 3519 0 3519 #> 9266 TCGA-RD-A8N2-01 0 3540 0 3540 0 3540 0 3540 #> 9267 TCGA-RD-A8N4-01 0 2171 0 2171 0 2171 0 2171 #> 9268 TCGA-RD-A8N5-01 1 1747 0 1747 0 1747 0 1747 #> 9269 TCGA-RD-A8N6-01 1 272 1 272 1 163 1 163 #> 9270 TCGA-RD-A8N9-01 0 1083 0 1083 0 1083 0 1083 #> 9271 TCGA-RD-A8NB-01 1 513 1 513 NA NA 1 230 #> 9272 TCGA-SW-A7EA-01 0 579 0 579 0 579 0 579 #> 9273 TCGA-SW-A7EB-01 0 176 0 176 NA NA 0 176 #> 9274 TCGA-VQ-A8DT-01 0 1484 0 1484 1 1376 1 1376 #> 9275 TCGA-VQ-A8DU-01 1 166 1 166 NA NA 1 158 #> 9276 TCGA-VQ-A8DV-01 1 403 1 403 NA NA 1 288 #> 9277 TCGA-VQ-A8DZ-01 1 396 1 396 NA NA 1 396 #> 9278 TCGA-VQ-A8E0-01 1 562 1 562 NA NA 1 531 #> 9279 TCGA-VQ-A8E2-01 0 1319 0 1319 0 1319 0 1319 #> 9280 TCGA-VQ-A8E3-01 1 661 NA 661 NA NA 1 538 #> 9281 TCGA-VQ-A8E7-01 0 1138 0 1138 NA NA 1 1048 #> 9282 TCGA-VQ-A8P2-01 0 1160 0 1160 0 1160 0 1160 #> 9283 TCGA-VQ-A8P3-01 0 1132 0 1132 0 1132 0 1132 #> 9284 TCGA-VQ-A8P5-01 1 235 NA 235 NA NA 0 235 #> 9285 TCGA-VQ-A8P8-01 0 942 0 942 0 942 0 942 #> 9286 TCGA-VQ-A8PB-01 1 1043 0 1043 0 1043 0 1043 #> 9287 TCGA-VQ-A8PC-01 1 1407 1 1407 NA NA 1 1287 #> 9288 TCGA-VQ-A8PD-01 1 496 1 496 NA NA 1 134 #> 9289 TCGA-VQ-A8PE-01 1 675 1 675 NA NA 1 265 #> 9290 TCGA-VQ-A8PF-01 1 76 0 76 0 76 0 76 #> 9291 TCGA-VQ-A8PH-01 1 389 1 389 NA NA 1 377 #> 9292 TCGA-VQ-A8PJ-01 1 82 1 82 NA NA 1 82 #> 9293 TCGA-VQ-A8PK-01 1 543 1 543 NA NA 1 263 #> 9294 TCGA-VQ-A8PM-01 1 57 0 57 NA NA 1 57 #> 9295 TCGA-VQ-A8PO-01 1 282 1 282 NA NA 1 256 #> 9296 TCGA-VQ-A8PP-01 1 712 1 712 NA NA 1 502 #> 9297 TCGA-VQ-A8PQ-01 1 476 1 476 NA NA 1 91 #> 9298 TCGA-VQ-A8PU-01 1 832 0 832 0 832 0 832 #> 9299 TCGA-VQ-A8PX-01 0 1964 0 1964 0 1964 0 1964 #> 9300 TCGA-VQ-A91A-01 0 1200 0 1200 0 1200 1 129 #> 9301 TCGA-VQ-A91D-01 1 356 1 356 NA NA 1 351 #> 9302 TCGA-VQ-A91E-01 0 664 0 664 0 664 0 664 #> 9303 TCGA-VQ-A91K-01 0 1862 0 1862 0 1862 0 1862 #> 9304 TCGA-VQ-A91N-01 1 570 1 570 NA NA 1 438 #> 9305 TCGA-VQ-A91Q-01 1 633 1 633 NA NA 1 551 #> 9306 TCGA-VQ-A91S-01 0 1000 0 1000 0 1000 0 1000 #> 9307 TCGA-VQ-A91U-01 1 52 NA 52 NA NA 0 52 #> 9308 TCGA-VQ-A91V-01 0 1297 0 1297 NA NA 1 504 #> 9309 TCGA-VQ-A91W-01 0 1851 0 1851 0 1851 0 1851 #> 9310 TCGA-VQ-A91X-01 1 289 0 289 0 289 0 289 #> 9311 TCGA-VQ-A91Y-01 1 296 1 296 NA NA 1 258 #> 9312 TCGA-VQ-A91Z-01 0 1690 0 1690 1 1310 1 1310 #> 9313 TCGA-VQ-A922-01 1 275 1 275 NA NA 1 252 #> 9314 TCGA-VQ-A923-01 1 61 0 61 0 61 0 61 #> 9315 TCGA-VQ-A924-01 1 1686 1 1686 NA NA 1 1686 #> 9316 TCGA-VQ-A925-01 1 138 1 138 NA NA 1 138 #> 9317 TCGA-VQ-A927-01 1 200 1 200 NA NA 1 200 #> 9318 TCGA-VQ-A928-01 1 174 1 174 NA NA 1 148 #> 9319 TCGA-VQ-A92D-01 0 2032 0 2032 0 2032 0 2032 #> 9320 TCGA-VQ-A94O-01 1 640 1 640 NA NA 1 185 #> 9321 TCGA-VQ-A94P-01 1 81 1 81 NA NA 1 81 #> 9322 TCGA-VQ-A94R-01 1 1294 1 1294 NA NA 1 1018 #> 9323 TCGA-VQ-A94T-01 1 342 1 342 NA NA 1 296 #> 9324 TCGA-VQ-A94U-01 0 819 0 819 0 819 0 819 #> 9325 TCGA-VQ-AA64-01 1 560 1 560 NA NA 1 560 #> 9326 TCGA-VQ-AA68-01 0 1328 0 1328 0 1328 0 1328 #> 9327 TCGA-VQ-AA69-01 0 864 0 864 0 864 0 864 #> 9328 TCGA-VQ-AA6A-01 0 1184 0 1184 0 1184 0 1184 #> 9329 TCGA-VQ-AA6B-01 0 1002 0 1002 0 1002 0 1002 #> 9330 TCGA-VQ-AA6D-01 0 521 0 521 0 521 0 521 #> 9331 TCGA-VQ-AA6F-01 0 1646 0 1646 NA NA 1 546 #> 9332 TCGA-VQ-AA6G-01 1 792 1 792 NA NA 1 469 #> 9333 TCGA-VQ-AA6I-01 1 491 1 491 NA NA 1 475 #> 9334 TCGA-VQ-AA6J-01 0 838 0 838 0 838 0 838 #> 9335 TCGA-VQ-AA6K-01 1 378 1 378 NA NA 1 332 #> 9336 TCGA-ZA-A8F6-01 0 525 0 525 0 525 0 525 #> 9337 TCGA-ZQ-A9CR-01 1 24 NA 24 NA NA 0 24 #> 9338 TCGA-2G-AAEW-01 1 618 1 618 NA NA 1 143 #> 9339 TCGA-2G-AAEX-01 0 1259 0 1259 0 1259 0 1259 #> 9340 TCGA-2G-AAF1-01 0 1403 0 1403 0 1403 0 1403 #> 9341 TCGA-2G-AAF4-01 0 2315 0 2315 0 2315 0 2315 #> 9342 TCGA-2G-AAF6-01 0 3491 0 3491 1 810 1 810 #> 9343 TCGA-2G-AAF8-01 0 3911 0 3911 1 3149 1 3149 #> 9344 TCGA-2G-AAFE-01 0 4702 0 4702 1 617 1 617 #> 9345 TCGA-2G-AAFG-05 0 6183 0 6183 1 2495 1 2495 #> 9346 TCGA-2G-AAFG-01 0 6183 0 6183 1 2495 1 2495 #> 9347 TCGA-2G-AAFH-01 0 1375 0 1375 0 1375 0 1375 #> 9348 TCGA-2G-AAFI-01 0 675 0 675 0 675 0 675 #> 9349 TCGA-2G-AAFJ-01 0 792 0 792 1 313 1 313 #> 9350 TCGA-2G-AAFL-01 0 750 0 750 1 38 1 38 #> 9351 TCGA-2G-AAFM-01 0 503 0 503 0 503 0 503 #> 9352 TCGA-2G-AAFN-01 0 773 0 773 0 773 0 773 #> 9353 TCGA-2G-AAFO-01 0 685 0 685 0 685 0 685 #> 9354 TCGA-2G-AAFV-01 0 1389 0 1389 0 1389 0 1389 #> 9355 TCGA-2G-AAFY-01 0 1099 0 1099 0 1099 0 1099 #> 9356 TCGA-2G-AAFZ-01 0 1353 0 1353 NA NA 0 1353 #> 9357 TCGA-2G-AAG0-01 0 1529 0 1529 1 90 1 90 #> 9358 TCGA-2G-AAG3-01 0 1593 0 1593 0 1593 1 181 #> 9359 TCGA-2G-AAG5-01 0 2299 0 2299 1 451 1 451 #> 9360 TCGA-2G-AAG6-01 0 2231 0 2231 0 2231 0 2231 #> 9361 TCGA-2G-AAG7-01 0 2475 0 2475 0 2475 0 2475 #> 9362 TCGA-2G-AAG8-01 0 2289 0 2289 0 2289 0 2289 #> 9363 TCGA-2G-AAG9-01 0 2234 0 2234 NA NA 0 2234 #> 9364 TCGA-2G-AAGA-01 0 2439 0 2439 0 2439 0 2439 #> 9365 TCGA-2G-AAGC-01 0 2585 0 2585 1 317 1 317 #> 9366 TCGA-2G-AAGE-01 0 2478 0 2478 1 121 1 121 #> 9367 TCGA-2G-AAGF-01 0 2734 0 2734 1 139 1 139 #> 9368 TCGA-2G-AAGG-01 0 2611 0 2611 NA NA 0 2611 #> 9369 TCGA-2G-AAGI-05 0 3137 0 3137 1 2193 1 2193 #> 9370 TCGA-2G-AAGI-01 0 3137 0 3137 1 2193 1 2193 #> 9371 TCGA-2G-AAGJ-01 0 2938 0 2938 1 171 1 171 #> 9372 TCGA-2G-AAGK-01 0 3621 0 3621 1 713 1 713 #> 9373 TCGA-2G-AAGM-01 0 3891 0 3891 NA NA 0 3891 #> 9374 TCGA-2G-AAGN-01 0 3656 0 3656 NA NA 0 3656 #> 9375 TCGA-2G-AAGO-01 0 4026 0 4026 NA NA 0 4026 #> 9376 TCGA-2G-AAGP-01 0 4018 0 4018 0 4018 0 4018 #> 9377 TCGA-2G-AAGS-01 0 4816 0 4816 0 4816 0 4816 #> 9378 TCGA-2G-AAGT-01 0 4406 0 4406 1 15 1 15 #> 9379 TCGA-2G-AAGV-01 0 4527 0 4527 0 4527 0 4527 #> 9380 TCGA-2G-AAGW-01 0 4899 0 4899 0 4899 0 4899 #> 9381 TCGA-2G-AAGX-01 0 5514 0 5514 1 4323 1 4323 #> 9382 TCGA-2G-AAGY-05 0 5329 0 5329 1 623 1 623 #> 9383 TCGA-2G-AAGY-01 0 5329 0 5329 1 623 1 623 #> 9384 TCGA-2G-AAGZ-01 0 5233 0 5233 NA NA 0 5233 #> 9385 TCGA-2G-AAH0-01 0 5477 0 5477 1 107 1 107 #> 9386 TCGA-2G-AAH2-01 0 6060 0 6060 0 6060 0 6060 #> 9387 TCGA-2G-AAH3-01 0 1822 0 1822 0 1822 0 1822 #> 9388 TCGA-2G-AAH4-01 0 6210 0 6210 NA NA 0 6210 #> 9389 TCGA-2G-AAH8-01 0 2248 0 2248 NA NA 0 2248 #> 9390 TCGA-2G-AAHA-01 0 3349 0 3349 NA NA 0 3349 #> 9391 TCGA-2G-AAHC-01 0 5539 0 5539 0 5539 0 5539 #> 9392 TCGA-2G-AAHG-01 0 1819 0 1819 0 1819 0 1819 #> 9393 TCGA-2G-AAHL-01 0 7081 0 7081 0 7081 0 7081 #> 9394 TCGA-2G-AAHN-01 0 6445 0 6445 0 6445 0 6445 #> 9395 TCGA-2G-AAHP-05 0 5667 0 5667 1 816 1 816 #> 9396 TCGA-2G-AAHP-01 0 5667 0 5667 1 816 1 816 #> 9397 TCGA-2G-AAHT-01 0 542 0 542 0 542 0 542 #> 9398 TCGA-2G-AAKD-01 0 6340 0 6340 NA NA 0 6340 #> 9399 TCGA-2G-AAKG-05 0 6598 0 6598 1 122 1 122 #> 9400 TCGA-2G-AAKG-01 0 6598 0 6598 1 122 1 122 #> 9401 TCGA-2G-AAKH-01 0 6862 0 6862 0 6862 0 6862 #> 9402 TCGA-2G-AAKL-01 0 7023 0 7023 NA NA 0 7023 #> 9403 TCGA-2G-AAKM-01 1 6972 0 6972 0 6972 0 6972 #> 9404 TCGA-2G-AAL5-01 0 7437 0 7437 1 3723 1 3723 #> 9405 TCGA-2G-AAL7-01 0 3991 0 3991 1 2 1 2 #> 9406 TCGA-2G-AALP-01 0 2645 0 2645 NA NA 0 2645 #> 9407 TCGA-2X-A9D5-01 0 435 0 435 0 435 0 435 #> 9408 TCGA-2X-A9D6-01 0 607 0 607 0 607 0 607 #> 9409 TCGA-4K-AA1G-01 0 436 0 436 0 436 0 436 #> 9410 TCGA-4K-AA1H-01 0 518 0 518 0 518 0 518 #> 9411 TCGA-4K-AA1I-01 0 3 0 3 NA NA 0 3 #> 9412 TCGA-4K-AAAL-01 0 483 0 483 1 147 1 147 #> 9413 TCGA-S6-A8JW-01 0 698 0 698 0 698 0 698 #> 9414 TCGA-S6-A8JX-01 0 552 0 552 0 552 0 552 #> 9415 TCGA-S6-A8JY-01 0 278 0 278 NA NA 0 278 #> 9416 TCGA-SB-A6J6-01 0 413 0 413 0 413 0 413 #> 9417 TCGA-SB-A76C-01 0 42 0 42 0 42 0 42 #> 9418 TCGA-SN-A6IS-01 0 496 0 496 0 496 0 496 #> 9419 TCGA-SN-A84W-01 0 293 0 293 0 293 0 293 #> 9420 TCGA-SN-A84X-01 0 312 0 312 0 312 0 312 #> 9421 TCGA-SN-A84Y-01 0 524 0 524 NA NA 1 44 #> 9422 TCGA-SO-A8JP-01 0 540 0 540 0 540 0 540 #> 9423 TCGA-VF-A8A8-01 0 1131 0 1131 0 1131 0 1131 #> 9424 TCGA-VF-A8A9-01 0 1119 0 1119 0 1119 0 1119 #> 9425 TCGA-VF-A8AB-01 0 760 0 760 NA NA 0 760 #> 9426 TCGA-VF-A8AC-01 0 1083 0 1083 0 1083 0 1083 #> 9427 TCGA-VF-A8AD-01 0 1006 0 1006 1 276 1 276 #> 9428 TCGA-VF-A8AE-01 0 727 0 727 0 727 0 727 #> 9429 TCGA-W4-A7U2-01 0 1263 0 1263 0 1263 0 1263 #> 9430 TCGA-W4-A7U3-01 0 149 0 149 0 149 0 149 #> 9431 TCGA-W4-A7U4-01 0 738 0 738 0 738 0 738 #> 9432 TCGA-WZ-A7V3-01 0 753 0 753 0 753 0 753 #> 9433 TCGA-WZ-A7V4-01 0 894 0 894 0 894 0 894 #> 9434 TCGA-WZ-A7V5-01 0 1061 0 1061 0 1061 0 1061 #> 9435 TCGA-WZ-A8D5-01 0 774 0 774 0 774 0 774 #> 9436 TCGA-X3-A8G4-01 0 856 0 856 NA NA 0 856 #> 9437 TCGA-XE-A8H1-01 0 209 0 209 0 209 0 209 #> 9438 TCGA-XE-A8H4-01 0 559 0 559 0 559 0 559 #> 9439 TCGA-XE-A8H5-01 0 1217 0 1217 0 1217 0 1217 #> 9440 TCGA-XE-A9SE-01 0 708 0 708 0 708 0 708 #> 9441 TCGA-XE-AANI-01 0 1041 0 1041 0 1041 0 1041 #> 9442 TCGA-XE-AANJ-01 0 2007 0 2007 NA NA 1 328 #> 9443 TCGA-XE-AANR-01 0 14 0 14 NA NA 0 14 #> 9444 TCGA-XE-AANV-01 0 1701 0 1701 1 1370 1 1370 #> 9445 TCGA-XE-AAO3-01 0 2857 0 2857 NA NA 0 2857 #> 9446 TCGA-XE-AAO4-01 0 367 0 367 0 367 0 367 #> 9447 TCGA-XE-AAO6-01 0 240 0 240 0 240 0 240 #> 9448 TCGA-XE-AAOB-01 1 513 1 513 NA NA 1 231 #> 9449 TCGA-XE-AAOC-01 0 270 0 270 0 270 0 270 #> 9450 TCGA-XE-AAOD-01 0 2058 0 2058 0 2058 0 2058 #> 9451 TCGA-XE-AAOF-01 0 1268 0 1268 0 1268 0 1268 #> 9452 TCGA-XE-AAOJ-01 0 1550 0 1550 NA NA 1 266 #> 9453 TCGA-XE-AAOL-01 0 13 0 13 NA NA 0 13 #> 9454 TCGA-XY-A89B-01 0 471 0 471 0 471 0 471 #> 9455 TCGA-XY-A8S2-01 0 672 0 672 0 672 0 672 #> 9456 TCGA-XY-A8S3-01 0 843 0 843 0 843 0 843 #> 9457 TCGA-XY-A9T9-01 0 281 0 281 0 281 0 281 #> 9458 TCGA-YU-A90P-01 0 2069 0 2069 0 2069 0 2069 #> 9459 TCGA-YU-A90Q-01 0 1964 0 1964 0 1964 0 1964 #> 9460 TCGA-YU-A90S-01 0 971 0 971 NA NA 0 971 #> 9461 TCGA-YU-A90W-01 0 1113 0 1113 0 1113 0 1113 #> 9462 TCGA-YU-A90Y-01 1 17 1 17 NA NA 1 17 #> 9463 TCGA-YU-A912-01 0 866 0 866 NA NA 0 866 #> 9464 TCGA-YU-A94D-01 0 2167 0 2167 0 2167 0 2167 #> 9465 TCGA-YU-A94I-01 0 536 0 536 0 536 0 536 #> 9466 TCGA-YU-AA4L-01 0 1573 0 1573 NA NA 1 105 #> 9467 TCGA-YU-AA61-01 0 864 0 864 0 864 0 864 #> 9468 TCGA-ZM-AA05-01 0 1126 0 1126 0 1126 0 1126 #> 9469 TCGA-ZM-AA06-01 0 1498 0 1498 0 1498 0 1498 #> 9470 TCGA-ZM-AA0B-01 0 838 0 838 0 838 0 838 #> 9471 TCGA-ZM-AA0D-01 0 848 0 848 0 848 0 848 #> 9472 TCGA-ZM-AA0E-01 0 811 0 811 0 811 0 811 #> 9473 TCGA-ZM-AA0F-01 0 681 0 681 0 681 0 681 #> 9474 TCGA-ZM-AA0H-01 0 1736 0 1736 0 1736 0 1736 #> 9475 TCGA-4C-A93U-01 0 129 0 129 NA NA 0 129 #> 9476 TCGA-BJ-A0YZ-01 0 754 0 754 0 754 0 754 #> 9477 TCGA-BJ-A0Z0-01 0 419 0 419 0 419 0 419 #> 9478 TCGA-BJ-A0Z2-01 0 1514 0 1514 NA NA 1 158 #> 9479 TCGA-BJ-A0Z3-01 0 497 0 497 NA NA 0 497 #> 9480 TCGA-BJ-A0Z5-01 0 448 0 448 NA NA 0 448 #> 9481 TCGA-BJ-A0Z9-01 0 1257 0 1257 NA NA 0 1257 #> 9482 TCGA-BJ-A0ZA-01 0 574 0 574 0 574 0 574 #> 9483 TCGA-BJ-A0ZB-01 0 122 0 122 NA NA 0 122 #> 9484 TCGA-BJ-A0ZC-01 0 352 0 352 0 352 0 352 #> 9485 TCGA-BJ-A0ZE-01 0 509 0 509 NA NA 0 509 #> 9486 TCGA-BJ-A0ZF-01 0 1217 0 1217 1 735 1 735 #> 9487 TCGA-BJ-A0ZG-01 0 775 0 775 NA NA 0 775 #> 9488 TCGA-BJ-A0ZH-01 0 460 0 460 NA NA 0 460 #> 9489 TCGA-BJ-A0ZJ-01 0 1280 0 1280 0 1280 0 1280 #> 9490 TCGA-BJ-A18Y-01 0 1563 0 1563 0 1563 0 1563 #> 9491 TCGA-BJ-A18Z-01 0 1263 0 1263 NA NA 0 1263 #> 9492 TCGA-BJ-A190-01 0 626 0 626 0 626 0 626 #> 9493 TCGA-BJ-A191-01 0 147 0 147 0 147 0 147 #> 9494 TCGA-BJ-A192-01 0 1349 0 1349 NA NA 0 1349 #> 9495 TCGA-BJ-A28R-01 0 1282 0 1282 NA NA 0 1282 #> 9496 TCGA-BJ-A28R-11 0 1282 0 1282 NA NA 0 1282 #> 9497 TCGA-BJ-A28S-01 0 640 0 640 NA NA 0 640 #> 9498 TCGA-BJ-A28T-01 0 1081 0 1081 NA NA 0 1081 #> 9499 TCGA-BJ-A28V-01 0 987 0 987 NA NA 0 987 #> 9500 TCGA-BJ-A28W-01 0 344 0 344 NA NA 0 344 #> 9501 TCGA-BJ-A28W-11 0 344 0 344 NA NA 0 344 #> 9502 TCGA-BJ-A28X-01 0 942 0 942 1 494 1 494 #> 9503 TCGA-BJ-A28X-11 0 942 0 942 1 494 1 494 #> 9504 TCGA-BJ-A28Z-01 0 337 0 337 NA NA 0 337 #> 9505 TCGA-BJ-A290-01 0 919 0 919 NA NA 1 329 #> 9506 TCGA-BJ-A290-11 0 919 0 919 NA NA 1 329 #> 9507 TCGA-BJ-A291-01 0 696 0 696 NA NA 0 696 #> 9508 TCGA-BJ-A2N7-01 0 559 0 559 0 559 0 559 #> 9509 TCGA-BJ-A2N7-11 0 559 0 559 0 559 0 559 #> 9510 TCGA-BJ-A2N8-01 0 504 0 504 NA NA 0 504 #> 9511 TCGA-BJ-A2N8-11 0 504 0 504 NA NA 0 504 #> 9512 TCGA-BJ-A2N9-01 0 623 0 623 NA NA 1 225 #> 9513 TCGA-BJ-A2N9-11 0 623 0 623 NA NA 1 225 #> 9514 TCGA-BJ-A2NA-01 0 577 0 577 NA NA 1 127 #> 9515 TCGA-BJ-A2NA-11 0 577 0 577 NA NA 1 127 #> 9516 TCGA-BJ-A2P4-01 0 390 0 390 0 390 0 390 #> 9517 TCGA-BJ-A3EZ-01 0 487 0 487 NA NA 0 487 #> 9518 TCGA-BJ-A3F0-01 0 424 0 424 0 424 0 424 #> 9519 TCGA-BJ-A3PR-01 0 1107 0 1107 0 1107 0 1107 #> 9520 TCGA-BJ-A3PR-11 0 1107 0 1107 0 1107 0 1107 #> 9521 TCGA-BJ-A3PT-01 0 709 0 709 NA NA 0 709 #> 9522 TCGA-BJ-A3PU-01 0 567 0 567 1 174 1 174 #> 9523 TCGA-BJ-A3PU-11 0 567 0 567 1 174 1 174 #> 9524 TCGA-BJ-A45C-01 1 243 1 243 NA NA 1 243 #> 9525 TCGA-BJ-A45D-01 0 331 0 331 NA NA 0 331 #> 9526 TCGA-BJ-A45E-01 0 639 0 639 NA NA 0 639 #> 9527 TCGA-BJ-A45F-01 0 105 0 105 NA NA 0 105 #> 9528 TCGA-BJ-A45G-01 0 725 0 725 NA NA 0 725 #> 9529 TCGA-BJ-A45H-01 0 865 0 865 NA NA 0 865 #> 9530 TCGA-BJ-A45I-01 0 470 0 470 NA NA 1 110 #> 9531 TCGA-BJ-A45J-01 0 658 0 658 NA NA 0 658 #> 9532 TCGA-BJ-A45K-01 0 705 0 705 NA NA 0 705 #> 9533 TCGA-BJ-A4O8-01 0 591 0 591 0 591 0 591 #> 9534 TCGA-BJ-A4O9-01 0 714 0 714 NA NA 0 714 #> 9535 TCGA-CE-A13K-01 0 385 0 385 0 385 0 385 #> 9536 TCGA-CE-A27D-01 0 374 0 374 0 374 0 374 #> 9537 TCGA-CE-A3MD-01 0 389 0 389 0 389 0 389 #> 9538 TCGA-CE-A3ME-01 0 379 0 379 0 379 0 379 #> 9539 TCGA-CE-A481-01 0 346 0 346 0 346 0 346 #> 9540 TCGA-CE-A482-01 0 325 0 325 0 325 0 325 #> 9541 TCGA-CE-A483-01 0 457 0 457 0 457 0 457 #> 9542 TCGA-CE-A484-01 0 378 0 378 0 378 0 378 #> 9543 TCGA-CE-A485-01 0 385 0 385 0 385 0 385 #> 9544 TCGA-DE-A0XZ-01 0 1090 0 1090 1 204 1 204 #> 9545 TCGA-DE-A0Y2-01 0 658 0 658 0 658 0 658 #> 9546 TCGA-DE-A0Y3-01 0 1526 0 1526 NA NA 1 30 #> 9547 TCGA-DE-A2OL-01 0 1145 0 1145 0 1145 0 1145 #> 9548 TCGA-DE-A3KN-01 0 831 0 831 NA NA 0 831 #> 9549 TCGA-DE-A4M8-01 0 564 0 564 0 564 0 564 #> 9550 TCGA-DE-A4M9-01 0 573 0 573 NA NA 0 573 #> 9551 TCGA-DE-A4MA-01 0 916 0 916 0 916 0 916 #> 9552 TCGA-DE-A4MB-01 0 352 0 352 NA NA 0 352 #> 9553 TCGA-DE-A4MC-01 0 913 0 913 1 332 1 332 #> 9554 TCGA-DE-A4MD-06 0 764 0 764 NA NA 1 267 #> 9555 TCGA-DE-A4MD-01 0 764 0 764 NA NA 1 267 #> 9556 TCGA-DE-A69J-01 0 447 0 447 0 447 0 447 #> 9557 TCGA-DE-A69K-01 0 434 0 434 NA NA 1 434 #> 9558 TCGA-DE-A7U5-01 0 84 0 84 NA NA 0 84 #> 9559 TCGA-DJ-A13L-01 0 303 0 303 0 303 0 303 #> 9560 TCGA-DJ-A13M-01 0 1484 0 1484 0 1484 0 1484 #> 9561 TCGA-DJ-A13O-01 0 1161 0 1161 0 1161 0 1161 #> 9562 TCGA-DJ-A13P-01 0 5150 0 5150 0 5150 0 5150 #> 9563 TCGA-DJ-A13R-01 0 565 0 565 0 565 0 565 #> 9564 TCGA-DJ-A13S-01 0 265 0 265 0 265 0 265 #> 9565 TCGA-DJ-A13T-01 0 1709 0 1709 0 1709 0 1709 #> 9566 TCGA-DJ-A13U-01 0 1590 0 1590 0 1590 0 1590 #> 9567 TCGA-DJ-A13V-01 0 1313 0 1313 0 1313 0 1313 #> 9568 TCGA-DJ-A13X-01 0 253 0 253 0 253 0 253 #> 9569 TCGA-DJ-A1QD-01 0 1462 0 1462 0 1462 0 1462 #> 9570 TCGA-DJ-A1QE-01 0 4134 0 4134 0 4134 0 4134 #> 9571 TCGA-DJ-A1QF-01 0 931 0 931 0 931 0 931 #> 9572 TCGA-DJ-A1QG-01 0 1368 0 1368 0 1368 0 1368 #> 9573 TCGA-DJ-A1QH-01 0 1293 0 1293 NA NA 0 1293 #> 9574 TCGA-DJ-A1QI-01 0 455 0 455 0 455 0 455 #> 9575 TCGA-DJ-A1QL-01 0 535 0 535 0 535 0 535 #> 9576 TCGA-DJ-A1QM-01 0 183 0 183 0 183 0 183 #> 9577 TCGA-DJ-A1QN-01 0 1295 0 1295 0 1295 0 1295 #> 9578 TCGA-DJ-A1QO-01 0 1442 0 1442 0 1442 1 1062 #> 9579 TCGA-DJ-A1QQ-01 0 534 0 534 0 534 0 534 #> 9580 TCGA-DJ-A2PN-01 0 307 0 307 0 307 0 307 #> 9581 TCGA-DJ-A2PO-01 0 243 0 243 0 243 0 243 #> 9582 TCGA-DJ-A2PP-01 0 930 0 930 0 930 0 930 #> 9583 TCGA-DJ-A2PQ-01 0 1077 0 1077 0 1077 0 1077 #> 9584 TCGA-DJ-A2PR-01 0 835 0 835 0 835 0 835 #> 9585 TCGA-DJ-A2PS-01 0 797 0 797 0 797 0 797 #> 9586 TCGA-DJ-A2PT-01 0 1181 0 1181 0 1181 0 1181 #> 9587 TCGA-DJ-A2PU-01 0 1033 0 1033 0 1033 0 1033 #> 9588 TCGA-DJ-A2PV-01 0 973 0 973 0 973 0 973 #> 9589 TCGA-DJ-A2PW-01 0 1060 0 1060 0 1060 0 1060 #> 9590 TCGA-DJ-A2PX-01 0 881 0 881 0 881 0 881 #> 9591 TCGA-DJ-A2PY-01 0 267 0 267 0 267 0 267 #> 9592 TCGA-DJ-A2PZ-01 0 256 0 256 0 256 0 256 #> 9593 TCGA-DJ-A2Q0-01 0 1045 0 1045 0 1045 0 1045 #> 9594 TCGA-DJ-A2Q1-01 0 1148 0 1148 0 1148 0 1148 #> 9595 TCGA-DJ-A2Q2-01 0 1337 0 1337 0 1337 0 1337 #> 9596 TCGA-DJ-A2Q3-01 0 1224 0 1224 0 1224 1 385 #> 9597 TCGA-DJ-A2Q4-01 0 1032 0 1032 0 1032 0 1032 #> 9598 TCGA-DJ-A2Q5-01 0 1140 0 1140 NA NA 0 1140 #> 9599 TCGA-DJ-A2Q6-01 0 1109 0 1109 0 1109 0 1109 #> 9600 TCGA-DJ-A2Q7-01 0 1068 0 1068 0 1068 0 1068 #> 9601 TCGA-DJ-A2Q9-01 0 1092 0 1092 0 1092 0 1092 #> 9602 TCGA-DJ-A2QA-01 0 1020 0 1020 0 1020 0 1020 #> 9603 TCGA-DJ-A2QB-01 0 1070 0 1070 NA NA 0 1070 #> 9604 TCGA-DJ-A2QC-01 0 1215 0 1215 0 1215 0 1215 #> 9605 TCGA-DJ-A3UK-01 0 1123 0 1123 0 1123 0 1123 #> 9606 TCGA-DJ-A3UM-01 0 944 0 944 0 944 0 944 #> 9607 TCGA-DJ-A3UN-01 0 986 0 986 0 986 0 986 #> 9608 TCGA-DJ-A3UO-01 0 957 0 957 NA NA 1 641 #> 9609 TCGA-DJ-A3UP-01 0 499 0 499 0 499 0 499 #> 9610 TCGA-DJ-A3UQ-01 0 595 0 595 0 595 0 595 #> 9611 TCGA-DJ-A3UR-01 0 1105 0 1105 0 1105 0 1105 #> 9612 TCGA-DJ-A3US-01 0 998 0 998 0 998 0 998 #> 9613 TCGA-DJ-A3UT-01 0 1105 0 1105 0 1105 0 1105 #> 9614 TCGA-DJ-A3UU-01 0 713 0 713 NA NA 0 713 #> 9615 TCGA-DJ-A3UV-01 0 1466 0 1466 0 1466 0 1466 #> 9616 TCGA-DJ-A3UW-01 0 1812 0 1812 0 1812 0 1812 #> 9617 TCGA-DJ-A3UX-01 0 345 0 345 0 345 0 345 #> 9618 TCGA-DJ-A3UY-01 0 1091 0 1091 0 1091 0 1091 #> 9619 TCGA-DJ-A3UZ-01 0 1246 0 1246 0 1246 0 1246 #> 9620 TCGA-DJ-A3V0-01 0 1125 0 1125 NA NA 0 1125 #> 9621 TCGA-DJ-A3V2-01 0 615 0 615 0 615 0 615 #> 9622 TCGA-DJ-A3V3-01 0 931 0 931 0 931 0 931 #> 9623 TCGA-DJ-A3V4-01 0 1294 0 1294 0 1294 0 1294 #> 9624 TCGA-DJ-A3V5-01 0 584 0 584 NA NA 0 584 #> 9625 TCGA-DJ-A3V6-01 0 818 0 818 0 818 0 818 #> 9626 TCGA-DJ-A3V7-01 0 706 0 706 0 706 0 706 #> 9627 TCGA-DJ-A3V8-01 0 647 0 647 0 647 0 647 #> 9628 TCGA-DJ-A3V9-01 0 623 0 623 NA NA 0 623 #> 9629 TCGA-DJ-A3VA-01 0 755 0 755 0 755 0 755 #> 9630 TCGA-DJ-A3VB-01 0 697 0 697 0 697 0 697 #> 9631 TCGA-DJ-A3VD-01 0 1238 0 1238 0 1238 0 1238 #> 9632 TCGA-DJ-A3VE-01 0 577 0 577 0 577 0 577 #> 9633 TCGA-DJ-A3VF-01 0 292 0 292 NA NA 0 292 #> 9634 TCGA-DJ-A3VG-01 0 1085 0 1085 0 1085 0 1085 #> 9635 TCGA-DJ-A3VI-01 0 95 0 95 0 95 0 95 #> 9636 TCGA-DJ-A3VJ-01 0 1108 0 1108 0 1108 0 1108 #> 9637 TCGA-DJ-A3VK-01 0 753 0 753 0 753 0 753 #> 9638 TCGA-DJ-A3VL-01 0 713 0 713 0 713 1 411 #> 9639 TCGA-DJ-A3VM-01 0 840 0 840 0 840 0 840 #> 9640 TCGA-DJ-A4UL-01 0 939 0 939 0 939 0 939 #> 9641 TCGA-DJ-A4UP-01 0 916 0 916 0 916 0 916 #> 9642 TCGA-DJ-A4UQ-01 0 1005 0 1005 NA NA 0 1005 #> 9643 TCGA-DJ-A4UR-01 0 1058 0 1058 1 113 1 113 #> 9644 TCGA-DJ-A4UT-01 0 823 0 823 0 823 0 823 #> 9645 TCGA-DJ-A4UW-01 0 819 0 819 NA NA 0 819 #> 9646 TCGA-DJ-A4V0-01 0 1081 0 1081 0 1081 0 1081 #> 9647 TCGA-DJ-A4V2-01 0 95 0 95 0 95 0 95 #> 9648 TCGA-DJ-A4V4-01 0 481 0 481 0 481 0 481 #> 9649 TCGA-DJ-A4V5-01 0 1076 0 1076 NA NA 0 1076 #> 9650 TCGA-DO-A1JZ-01 0 1670 0 1670 NA NA 0 1670 #> 9651 TCGA-DO-A1JZ-11 0 1670 0 1670 NA NA 0 1670 #> 9652 TCGA-DO-A1K0-01 0 655 0 655 1 577 1 577 #> 9653 TCGA-DO-A2HM-01 0 71 0 71 NA NA 0 71 #> 9654 TCGA-E3-A3DY-01 0 2815 0 2815 0 2815 0 2815 #> 9655 TCGA-E3-A3DZ-01 0 1436 0 1436 0 1436 0 1436 #> 9656 TCGA-E3-A3E0-01 0 2019 0 2019 0 2019 0 2019 #> 9657 TCGA-E3-A3E1-01 0 2449 0 2449 0 2449 0 2449 #> 9658 TCGA-E3-A3E2-01 0 1922 0 1922 0 1922 0 1922 #> 9659 TCGA-E3-A3E3-01 0 1595 0 1595 1 445 1 445 #> 9660 TCGA-E3-A3E5-01 0 1215 0 1215 NA NA 0 1215 #> 9661 TCGA-E8-A242-01 0 950 0 950 NA NA 0 950 #> 9662 TCGA-E8-A2EA-01 0 1085 0 1085 0 1085 0 1085 #> 9663 TCGA-E8-A2JQ-01 0 356 0 356 NA NA 0 356 #> 9664 TCGA-E8-A2JQ-11 0 356 0 356 NA NA 0 356 #> 9665 TCGA-E8-A3X7-01 0 951 0 951 NA NA 0 951 #> 9666 TCGA-E8-A413-01 0 912 0 912 0 912 0 912 #> 9667 TCGA-E8-A414-01 0 958 0 958 0 958 0 958 #> 9668 TCGA-E8-A415-01 0 944 0 944 0 944 0 944 #> 9669 TCGA-E8-A416-01 0 952 0 952 0 952 0 952 #> 9670 TCGA-E8-A417-01 0 938 0 938 0 938 0 938 #> 9671 TCGA-E8-A418-01 0 92 0 92 NA NA 0 92 #> 9672 TCGA-E8-A419-01 0 774 0 774 0 774 0 774 #> 9673 TCGA-E8-A432-01 0 931 0 931 1 720 1 720 #> 9674 TCGA-E8-A433-01 0 951 0 951 0 951 0 951 #> 9675 TCGA-E8-A434-01 0 953 0 953 0 953 0 953 #> 9676 TCGA-E8-A436-01 0 455 0 455 NA NA 0 455 #> 9677 TCGA-E8-A437-01 0 1213 0 1213 NA NA 0 1213 #> 9678 TCGA-E8-A438-01 0 1019 0 1019 0 1019 0 1019 #> 9679 TCGA-E8-A44K-01 0 943 0 943 0 943 0 943 #> 9680 TCGA-E8-A44M-01 0 917 0 917 0 917 0 917 #> 9681 TCGA-EL-A3CL-01 1 963 NA 963 0 963 0 963 #> 9682 TCGA-EL-A3CM-01 1 813 NA 813 NA NA 0 813 #> 9683 TCGA-EL-A3CN-01 0 4731 0 4731 NA NA 0 4731 #> 9684 TCGA-EL-A3CO-01 1 2973 NA 2973 NA NA 0 2973 #> 9685 TCGA-EL-A3CP-01 0 4831 0 4831 NA NA 0 4831 #> 9686 TCGA-EL-A3CR-01 1 233 NA 233 NA NA 0 233 #> 9687 TCGA-EL-A3CS-01 1 1385 1 1385 NA NA 1 1385 #> 9688 TCGA-EL-A3CT-01 1 1854 NA 1854 NA NA 0 1854 #> 9689 TCGA-EL-A3CU-01 0 4780 0 4780 0 4780 0 4780 #> 9690 TCGA-EL-A3CV-01 0 1154 0 1154 NA NA 0 1154 #> 9691 TCGA-EL-A3CW-01 1 1734 NA 1734 0 1734 0 1734 #> 9692 TCGA-EL-A3CX-01 0 3243 0 3243 0 3243 0 3243 #> 9693 TCGA-EL-A3CY-01 0 127 0 127 0 127 0 127 #> 9694 TCGA-EL-A3CZ-01 0 2418 0 2418 NA NA 1 1426 #> 9695 TCGA-EL-A3D0-01 0 4254 0 4254 NA NA 0 4254 #> 9696 TCGA-EL-A3D1-01 0 2997 0 2997 0 2997 0 2997 #> 9697 TCGA-EL-A3D4-01 0 2116 0 2116 NA NA 0 2116 #> 9698 TCGA-EL-A3D5-01 0 1737 0 1737 NA NA 0 1737 #> 9699 TCGA-EL-A3D6-01 0 3296 0 3296 NA NA 0 3296 #> 9700 TCGA-EL-A3GO-01 0 1973 0 1973 1 6 1 6 #> 9701 TCGA-EL-A3GP-01 0 1506 0 1506 0 1506 0 1506 #> 9702 TCGA-EL-A3GQ-01 0 1528 0 1528 0 1528 0 1528 #> 9703 TCGA-EL-A3GR-01 0 3501 0 3501 0 3501 0 3501 #> 9704 TCGA-EL-A3GS-01 0 1989 0 1989 0 1989 0 1989 #> 9705 TCGA-EL-A3GU-01 0 4137 0 4137 1 544 1 544 #> 9706 TCGA-EL-A3GV-01 0 1532 0 1532 0 1532 0 1532 #> 9707 TCGA-EL-A3GW-01 0 1527 0 1527 0 1527 0 1527 #> 9708 TCGA-EL-A3GX-01 0 4494 0 4494 1 439 1 439 #> 9709 TCGA-EL-A3GY-01 0 3076 0 3076 0 3076 0 3076 #> 9710 TCGA-EL-A3GZ-01 0 4258 0 4258 0 4258 0 4258 #> 9711 TCGA-EL-A3GZ-11 0 4258 0 4258 0 4258 0 4258 #> 9712 TCGA-EL-A3H1-01 1 1500 0 1500 0 1500 0 1500 #> 9713 TCGA-EL-A3H1-11 1 1500 0 1500 0 1500 0 1500 #> 9714 TCGA-EL-A3H2-01 1 1019 1 1019 NA NA 1 1019 #> 9715 TCGA-EL-A3H2-11 1 1019 1 1019 NA NA 1 1019 #> 9716 TCGA-EL-A3H3-01 0 1319 0 1319 0 1319 0 1319 #> 9717 TCGA-EL-A3H4-01 0 1512 0 1512 NA NA 0 1512 #> 9718 TCGA-EL-A3H5-01 0 2542 0 2542 NA NA 0 2542 #> 9719 TCGA-EL-A3H7-01 0 4228 0 4228 0 4228 0 4228 #> 9720 TCGA-EL-A3H7-11 0 4228 0 4228 0 4228 0 4228 #> 9721 TCGA-EL-A3H8-01 0 4577 0 4577 0 4577 0 4577 #> 9722 TCGA-EL-A3MW-01 0 3305 0 3305 0 3305 0 3305 #> 9723 TCGA-EL-A3MW-11 0 3305 0 3305 0 3305 0 3305 #> 9724 TCGA-EL-A3MX-01 1 1753 1 1753 NA NA 1 1708 #> 9725 TCGA-EL-A3MX-11 1 1753 1 1753 NA NA 1 1708 #> 9726 TCGA-EL-A3MY-01 1 533 1 533 NA NA 1 533 #> 9727 TCGA-EL-A3MY-11 1 533 1 533 NA NA 1 533 #> 9728 TCGA-EL-A3MZ-01 1 1597 0 1597 NA NA 0 1597 #> 9729 TCGA-EL-A3N2-01 0 902 0 902 0 902 0 902 #> 9730 TCGA-EL-A3N2-11 0 902 0 902 0 902 0 902 #> 9731 TCGA-EL-A3N3-01 0 5423 0 5423 0 5423 0 5423 #> 9732 TCGA-EL-A3N3-11 0 5423 0 5423 0 5423 0 5423 #> 9733 TCGA-EL-A3T0-01 0 4335 0 4335 0 4335 0 4335 #> 9734 TCGA-EL-A3T0-11 0 4335 0 4335 0 4335 0 4335 #> 9735 TCGA-EL-A3T1-01 0 3941 0 3941 0 3941 0 3941 #> 9736 TCGA-EL-A3T1-11 0 3941 0 3941 0 3941 0 3941 #> 9737 TCGA-EL-A3T2-01 0 988 0 988 1 903 1 903 #> 9738 TCGA-EL-A3T2-11 0 988 0 988 1 903 1 903 #> 9739 TCGA-EL-A3T3-01 0 4017 0 4017 0 4017 0 4017 #> 9740 TCGA-EL-A3T3-11 0 4017 0 4017 0 4017 0 4017 #> 9741 TCGA-EL-A3T6-01 0 2988 0 2988 0 2988 0 2988 #> 9742 TCGA-EL-A3T6-11 0 2988 0 2988 0 2988 0 2988 #> 9743 TCGA-EL-A3T7-01 0 1256 0 1256 0 1256 0 1256 #> 9744 TCGA-EL-A3T7-11 0 1256 0 1256 0 1256 0 1256 #> 9745 TCGA-EL-A3T8-01 0 3269 0 3269 0 3269 0 3269 #> 9746 TCGA-EL-A3T8-11 0 3269 0 3269 0 3269 0 3269 #> 9747 TCGA-EL-A3T9-01 1 174 1 174 NA NA 1 174 #> 9748 TCGA-EL-A3TA-01 0 2035 0 2035 0 2035 0 2035 #> 9749 TCGA-EL-A3TA-11 0 2035 0 2035 0 2035 0 2035 #> 9750 TCGA-EL-A3TB-01 0 2519 0 2519 0 2519 0 2519 #> 9751 TCGA-EL-A3TB-11 0 2519 0 2519 0 2519 0 2519 #> 9752 TCGA-EL-A3ZG-01 0 2724 0 2724 0 2724 0 2724 #> 9753 TCGA-EL-A3ZG-11 0 2724 0 2724 0 2724 0 2724 #> 9754 TCGA-EL-A3ZH-01 0 2773 0 2773 0 2773 0 2773 #> 9755 TCGA-EL-A3ZH-11 0 2773 0 2773 0 2773 0 2773 #> 9756 TCGA-EL-A3ZK-01 0 1575 0 1575 0 1575 0 1575 #> 9757 TCGA-EL-A3ZK-11 0 1575 0 1575 0 1575 0 1575 #> 9758 TCGA-EL-A3ZL-01 0 1895 0 1895 0 1895 0 1895 #> 9759 TCGA-EL-A3ZL-11 0 1895 0 1895 0 1895 0 1895 #> 9760 TCGA-EL-A3ZM-01 0 1096 0 1096 NA NA 0 1096 #> 9761 TCGA-EL-A3ZM-11 0 1096 0 1096 NA NA 0 1096 #> 9762 TCGA-EL-A3ZN-01 0 1614 0 1614 0 1614 0 1614 #> 9763 TCGA-EL-A3ZO-01 0 2211 0 2211 0 2211 0 2211 #> 9764 TCGA-EL-A3ZO-11 0 2211 0 2211 0 2211 0 2211 #> 9765 TCGA-EL-A3ZP-01 0 1992 0 1992 0 1992 0 1992 #> 9766 TCGA-EL-A3ZP-11 0 1992 0 1992 0 1992 0 1992 #> 9767 TCGA-EL-A3ZQ-01 0 1862 0 1862 0 1862 0 1862 #> 9768 TCGA-EL-A3ZQ-11 0 1862 0 1862 0 1862 0 1862 #> 9769 TCGA-EL-A3ZR-01 0 1830 0 1830 0 1830 0 1830 #> 9770 TCGA-EL-A3ZR-11 0 1830 0 1830 0 1830 0 1830 #> 9771 TCGA-EL-A3ZS-01 0 215 0 215 0 215 0 215 #> 9772 TCGA-EL-A3ZS-11 0 215 0 215 0 215 0 215 #> 9773 TCGA-EL-A3ZT-01 0 1808 0 1808 0 1808 0 1808 #> 9774 TCGA-EL-A3ZT-11 0 1808 0 1808 0 1808 0 1808 #> 9775 TCGA-EL-A4JV-01 0 1748 0 1748 0 1748 0 1748 #> 9776 TCGA-EL-A4JW-01 0 1056 0 1056 0 1056 0 1056 #> 9777 TCGA-EL-A4JX-01 0 1398 0 1398 0 1398 0 1398 #> 9778 TCGA-EL-A4JZ-01 0 1856 0 1856 0 1856 0 1856 #> 9779 TCGA-EL-A4K0-01 0 944 0 944 NA NA 0 944 #> 9780 TCGA-EL-A4K1-01 0 1046 0 1046 0 1046 0 1046 #> 9781 TCGA-EL-A4K2-01 0 928 0 928 0 928 0 928 #> 9782 TCGA-EL-A4K4-01 0 1623 0 1623 0 1623 0 1623 #> 9783 TCGA-EL-A4K6-01 0 1343 0 1343 NA NA 1 874 #> 9784 TCGA-EL-A4K7-01 0 1251 0 1251 0 1251 0 1251 #> 9785 TCGA-EL-A4K9-01 0 1455 0 1455 0 1455 0 1455 #> 9786 TCGA-EL-A4KD-01 0 1326 0 1326 0 1326 0 1326 #> 9787 TCGA-EL-A4KG-01 0 739 0 739 0 739 0 739 #> 9788 TCGA-EL-A4KH-01 0 823 0 823 0 823 0 823 #> 9789 TCGA-EL-A4KI-01 0 727 0 727 1 265 1 265 #> 9790 TCGA-EM-A1CS-01 0 817 0 817 0 817 0 817 #> 9791 TCGA-EM-A1CS-11 0 817 0 817 0 817 0 817 #> 9792 TCGA-EM-A1CT-01 0 553 0 553 NA NA 0 553 #> 9793 TCGA-EM-A1CT-11 0 553 0 553 NA NA 0 553 #> 9794 TCGA-EM-A1CU-01 0 636 0 636 NA NA 0 636 #> 9795 TCGA-EM-A1CU-11 0 636 0 636 NA NA 0 636 #> 9796 TCGA-EM-A1CV-01 0 1475 0 1475 NA NA 0 1475 #> 9797 TCGA-EM-A1CV-11 0 1475 0 1475 NA NA 0 1475 #> 9798 TCGA-EM-A1CW-01 0 549 0 549 0 549 0 549 #> 9799 TCGA-EM-A1CW-11 0 549 0 549 0 549 0 549 #> 9800 TCGA-EM-A1YA-01 0 602 0 602 0 602 0 602 #> 9801 TCGA-EM-A1YB-01 0 592 0 592 0 592 0 592 #> 9802 TCGA-EM-A1YC-01 0 2391 0 2391 0 2391 0 2391 #> 9803 TCGA-EM-A1YC-11 0 2391 0 2391 0 2391 0 2391 #> 9804 TCGA-EM-A1YD-01 0 1734 0 1734 0 1734 0 1734 #> 9805 TCGA-EM-A1YE-01 0 1645 0 1645 0 1645 0 1645 #> 9806 TCGA-EM-A22I-01 0 448 0 448 NA NA 0 448 #> 9807 TCGA-EM-A22J-01 0 441 0 441 NA NA 0 441 #> 9808 TCGA-EM-A22K-01 0 479 0 479 NA NA 0 479 #> 9809 TCGA-EM-A22L-01 0 318 0 318 0 318 0 318 #> 9810 TCGA-EM-A22M-01 0 442 0 442 0 442 0 442 #> 9811 TCGA-EM-A22N-01 0 324 0 324 NA NA 0 324 #> 9812 TCGA-EM-A22O-01 0 1344 0 1344 NA NA 0 1344 #> 9813 TCGA-EM-A22P-01 0 1256 0 1256 NA NA 0 1256 #> 9814 TCGA-EM-A22Q-01 0 433 0 433 0 433 0 433 #> 9815 TCGA-EM-A2CJ-01 0 1447 0 1447 0 1447 0 1447 #> 9816 TCGA-EM-A2CK-01 0 544 0 544 0 544 0 544 #> 9817 TCGA-EM-A2CL-01 0 401 0 401 0 401 0 401 #> 9818 TCGA-EM-A2CM-01 0 1253 0 1253 0 1253 0 1253 #> 9819 TCGA-EM-A2CN-01 0 715 0 715 NA NA 0 715 #> 9820 TCGA-EM-A2CO-01 0 184 0 184 0 184 0 184 #> 9821 TCGA-EM-A2CP-01 0 91 0 91 0 91 0 91 #> 9822 TCGA-EM-A2CQ-01 0 374 0 374 0 374 0 374 #> 9823 TCGA-EM-A2CR-01 0 415 0 415 0 415 0 415 #> 9824 TCGA-EM-A2CS-06 0 841 0 841 NA NA 0 841 #> 9825 TCGA-EM-A2CS-01 0 841 0 841 NA NA 0 841 #> 9826 TCGA-EM-A2CT-01 0 1474 0 1474 0 1474 0 1474 #> 9827 TCGA-EM-A2CU-01 0 400 0 400 0 400 0 400 #> 9828 TCGA-EM-A2OV-01 0 674 0 674 0 674 0 674 #> 9829 TCGA-EM-A2OW-01 0 1227 0 1227 0 1227 0 1227 #> 9830 TCGA-EM-A2OX-01 0 600 0 600 NA NA 0 600 #> 9831 TCGA-EM-A2OY-01 0 983 0 983 0 983 0 983 #> 9832 TCGA-EM-A2OZ-01 0 1033 0 1033 0 1033 0 1033 #> 9833 TCGA-EM-A2P0-01 0 535 0 535 0 535 0 535 #> 9834 TCGA-EM-A2P1-06 0 531 0 531 1 363 1 363 #> 9835 TCGA-EM-A2P1-01 0 531 0 531 1 363 1 363 #> 9836 TCGA-EM-A2P2-01 0 526 0 526 0 526 0 526 #> 9837 TCGA-EM-A2P3-01 0 444 0 444 0 444 0 444 #> 9838 TCGA-EM-A3AI-01 0 685 0 685 0 685 0 685 #> 9839 TCGA-EM-A3AJ-01 0 941 0 941 NA NA 0 941 #> 9840 TCGA-EM-A3AK-01 0 477 0 477 0 477 0 477 #> 9841 TCGA-EM-A3AL-01 0 430 0 430 0 430 0 430 #> 9842 TCGA-EM-A3AN-01 0 1006 0 1006 NA NA 0 1006 #> 9843 TCGA-EM-A3AO-01 0 1354 0 1354 NA NA 0 1354 #> 9844 TCGA-EM-A3AP-01 0 254 0 254 0 254 0 254 #> 9845 TCGA-EM-A3AQ-01 0 904 0 904 0 904 0 904 #> 9846 TCGA-EM-A3AR-01 0 1133 0 1133 0 1133 0 1133 #> 9847 TCGA-EM-A3FJ-01 0 850 0 850 0 850 0 850 #> 9848 TCGA-EM-A3FK-01 0 723 0 723 0 723 0 723 #> 9849 TCGA-EM-A3FL-01 0 1441 0 1441 0 1441 0 1441 #> 9850 TCGA-EM-A3FM-01 0 639 0 639 NA NA 1 514 #> 9851 TCGA-EM-A3FN-01 0 367 0 367 0 367 0 367 #> 9852 TCGA-EM-A3FO-01 0 532 0 532 0 532 0 532 #> 9853 TCGA-EM-A3FP-01 0 529 0 529 0 529 0 529 #> 9854 TCGA-EM-A3FQ-06 0 492 0 492 0 492 0 492 #> 9855 TCGA-EM-A3FQ-01 0 492 0 492 0 492 0 492 #> 9856 TCGA-EM-A3FR-01 0 457 0 457 0 457 0 457 #> 9857 TCGA-EM-A3O3-01 0 441 0 441 0 441 0 441 #> 9858 TCGA-EM-A3O6-01 0 458 0 458 0 458 0 458 #> 9859 TCGA-EM-A3O7-01 0 223 0 223 0 223 0 223 #> 9860 TCGA-EM-A3O8-01 0 381 0 381 0 381 0 381 #> 9861 TCGA-EM-A3O9-01 0 281 0 281 0 281 0 281 #> 9862 TCGA-EM-A3OA-01 0 822 0 822 0 822 0 822 #> 9863 TCGA-EM-A3OB-01 0 1176 0 1176 0 1176 0 1176 #> 9864 TCGA-EM-A3ST-01 0 1182 0 1182 1 966 1 966 #> 9865 TCGA-EM-A3ST-11 0 1182 0 1182 1 966 1 966 #> 9866 TCGA-EM-A3SU-06 0 911 0 911 0 911 0 911 #> 9867 TCGA-EM-A3SU-01 0 911 0 911 0 911 0 911 #> 9868 TCGA-EM-A3SX-01 0 908 0 908 NA NA 0 908 #> 9869 TCGA-EM-A3SY-01 0 411 0 411 0 411 0 411 #> 9870 TCGA-EM-A3SZ-01 0 389 0 389 0 389 0 389 #> 9871 TCGA-EM-A4FF-01 0 2573 0 2573 NA NA 1 1785 #> 9872 TCGA-EM-A4FH-01 0 892 0 892 0 892 0 892 #> 9873 TCGA-EM-A4FK-01 0 649 0 649 0 649 0 649 #> 9874 TCGA-EM-A4FM-01 0 162 0 162 NA NA 0 162 #> 9875 TCGA-EM-A4FN-01 0 802 0 802 NA NA 0 802 #> 9876 TCGA-EM-A4FO-01 0 802 0 802 0 802 0 802 #> 9877 TCGA-EM-A4FQ-01 0 683 0 683 0 683 0 683 #> 9878 TCGA-EM-A4FR-01 0 655 0 655 0 655 0 655 #> 9879 TCGA-EM-A4FU-01 0 1840 0 1840 1 781 1 781 #> 9880 TCGA-EM-A4FV-01 0 744 0 744 0 744 0 744 #> 9881 TCGA-EM-A4G1-01 0 416 0 416 0 416 0 416 #> 9882 TCGA-ET-A25G-01 0 2492 0 2492 0 2492 0 2492 #> 9883 TCGA-ET-A25I-01 0 2485 0 2485 0 2485 0 2485 #> 9884 TCGA-ET-A25J-01 0 2359 0 2359 0 2359 0 2359 #> 9885 TCGA-ET-A25K-01 0 2142 0 2142 0 2142 0 2142 #> 9886 TCGA-ET-A25L-01 0 1721 0 1721 NA NA 0 1721 #> 9887 TCGA-ET-A25M-01 0 1831 0 1831 0 1831 0 1831 #> 9888 TCGA-ET-A25N-01 0 1928 0 1928 0 1928 0 1928 #> 9889 TCGA-ET-A25O-01 0 1986 0 1986 0 1986 0 1986 #> 9890 TCGA-ET-A25P-01 0 559 0 559 0 559 0 559 #> 9891 TCGA-ET-A25R-01 0 1930 0 1930 0 1930 0 1930 #> 9892 TCGA-ET-A2MX-01 0 2689 0 2689 0 2689 0 2689 #> 9893 TCGA-ET-A2MX-11 0 2689 0 2689 0 2689 0 2689 #> 9894 TCGA-ET-A2MY-01 0 1787 0 1787 0 1787 0 1787 #> 9895 TCGA-ET-A2MZ-01 0 1133 0 1133 NA NA 0 1133 #> 9896 TCGA-ET-A2N0-01 0 1600 0 1600 0 1600 0 1600 #> 9897 TCGA-ET-A2N3-01 0 2535 0 2535 NA NA 0 2535 #> 9898 TCGA-ET-A2N4-01 0 81 0 81 NA NA 0 81 #> 9899 TCGA-ET-A2N5-01 0 2460 0 2460 NA NA 0 2460 #> 9900 TCGA-ET-A2N5-11 0 2460 0 2460 NA NA 0 2460 #> 9901 TCGA-ET-A39I-01 1 1011 0 1011 0 1011 0 1011 #> 9902 TCGA-ET-A39J-01 0 3227 0 3227 0 3227 0 3227 #> 9903 TCGA-ET-A39K-01 0 3267 0 3267 NA NA 1 711 #> 9904 TCGA-ET-A39L-01 0 3299 0 3299 0 3299 0 3299 #> 9905 TCGA-ET-A39M-01 0 2582 0 2582 0 2582 0 2582 #> 9906 TCGA-ET-A39N-01 0 3751 0 3751 0 3751 0 3751 #> 9907 TCGA-ET-A39O-01 0 3059 0 3059 0 3059 0 3059 #> 9908 TCGA-ET-A39P-01 0 2900 0 2900 NA NA 0 2900 #> 9909 TCGA-ET-A39R-01 0 2863 0 2863 0 2863 0 2863 #> 9910 TCGA-ET-A39S-01 0 1676 0 1676 0 1676 0 1676 #> 9911 TCGA-ET-A39T-01 0 2987 0 2987 0 2987 0 2987 #> 9912 TCGA-ET-A3BN-01 0 859 0 859 0 859 0 859 #> 9913 TCGA-ET-A3BO-01 0 1533 0 1533 NA NA 0 1533 #> 9914 TCGA-ET-A3BP-01 0 2406 0 2406 0 2406 0 2406 #> 9915 TCGA-ET-A3BQ-01 0 2331 0 2331 0 2331 0 2331 #> 9916 TCGA-ET-A3BS-01 0 176 0 176 0 176 0 176 #> 9917 TCGA-ET-A3BT-01 0 2665 0 2665 NA NA 1 267 #> 9918 TCGA-ET-A3BU-01 0 2367 0 2367 0 2367 0 2367 #> 9919 TCGA-ET-A3BV-01 0 2294 0 2294 1 1204 1 1204 #> 9920 TCGA-ET-A3BW-01 0 1419 0 1419 0 1419 0 1419 #> 9921 TCGA-ET-A3BX-01 0 1596 0 1596 0 1596 0 1596 #> 9922 TCGA-ET-A3DO-01 0 3552 0 3552 1 570 1 570 #> 9923 TCGA-ET-A3DP-01 0 2877 0 2877 0 2877 0 2877 #> 9924 TCGA-ET-A3DP-11 0 2877 0 2877 0 2877 0 2877 #> 9925 TCGA-ET-A3DQ-01 0 2581 0 2581 0 2581 0 2581 #> 9926 TCGA-ET-A3DR-01 0 2451 0 2451 0 2451 0 2451 #> 9927 TCGA-ET-A3DS-01 0 2033 0 2033 0 2033 0 2033 #> 9928 TCGA-ET-A3DT-01 0 1330 0 1330 0 1330 0 1330 #> 9929 TCGA-ET-A3DU-01 0 1911 0 1911 NA NA 0 1911 #> 9930 TCGA-ET-A3DV-01 0 5068 0 5068 0 5068 0 5068 #> 9931 TCGA-ET-A3DW-01 0 752 0 752 0 752 0 752 #> 9932 TCGA-ET-A3DW-11 0 752 0 752 0 752 0 752 #> 9933 TCGA-ET-A40P-01 0 1338 0 1338 0 1338 0 1338 #> 9934 TCGA-ET-A40Q-01 0 1407 0 1407 1 218 1 218 #> 9935 TCGA-ET-A40R-01 0 1350 0 1350 NA NA 0 1350 #> 9936 TCGA-ET-A40S-01 0 1223 0 1223 NA NA 0 1223 #> 9937 TCGA-ET-A40T-01 0 1140 0 1140 NA NA 0 1140 #> 9938 TCGA-ET-A4KN-01 0 1009 0 1009 0 1009 0 1009 #> 9939 TCGA-ET-A4KQ-01 0 955 0 955 0 955 0 955 #> 9940 TCGA-FE-A22Z-01 0 2243 0 2243 NA NA 1 1215 #> 9941 TCGA-FE-A230-01 0 2173 0 2173 1 526 1 526 #> 9942 TCGA-FE-A231-01 0 961 0 961 NA NA 0 961 #> 9943 TCGA-FE-A232-01 0 2424 0 2424 0 2424 0 2424 #> 9944 TCGA-FE-A233-01 0 751 0 751 1 567 1 567 #> 9945 TCGA-FE-A234-01 0 2075 0 2075 1 483 1 483 #> 9946 TCGA-FE-A235-01 0 3571 0 3571 0 3571 0 3571 #> 9947 TCGA-FE-A236-01 0 2031 0 2031 0 2031 0 2031 #> 9948 TCGA-FE-A237-01 0 3431 0 3431 1 492 1 492 #> 9949 TCGA-FE-A238-01 0 1215 0 1215 1 431 1 431 #> 9950 TCGA-FE-A239-01 1 1023 1 1023 1 933 1 933 #> 9951 TCGA-FE-A23A-01 0 2489 0 2489 0 2489 0 2489 #> 9952 TCGA-FE-A3PA-01 0 3235 0 3235 NA NA 0 3235 #> 9953 TCGA-FE-A3PB-01 0 2590 0 2590 0 2590 0 2590 #> 9954 TCGA-FE-A3PC-01 0 2606 0 2606 0 2606 0 2606 #> 9955 TCGA-FE-A3PD-01 0 2396 0 2396 0 2396 0 2396 #> 9956 TCGA-FK-A3S3-01 0 2162 0 2162 0 2162 0 2162 #> 9957 TCGA-FK-A3SB-01 0 125 0 125 0 125 0 125 #> 9958 TCGA-FK-A3SD-01 0 32 0 32 0 32 0 32 #> 9959 TCGA-FK-A3SE-01 0 670 0 670 0 670 0 670 #> 9960 TCGA-FK-A3SG-01 0 28 0 28 0 28 0 28 #> 9961 TCGA-FK-A3SH-01 0 1463 0 1463 0 1463 0 1463 #> 9962 TCGA-FK-A4UB-01 0 3531 0 3531 NA NA 0 3531 #> 9963 TCGA-FY-A2QD-01 0 38 0 38 NA NA 0 38 #> 9964 TCGA-FY-A3BL-01 0 621 0 621 0 621 0 621 #> 9965 TCGA-FY-A3I4-01 0 542 0 542 0 542 0 542 #> 9966 TCGA-FY-A3I5-01 0 238 0 238 0 238 0 238 #> 9967 TCGA-FY-A3NM-01 0 885 0 885 0 885 0 885 #> 9968 TCGA-FY-A3NN-01 0 0 0 0 0 0 0 0 #> 9969 TCGA-FY-A3NP-01 0 491 0 491 0 491 0 491 #> 9970 TCGA-FY-A3ON-01 0 595 0 595 0 595 0 595 #> 9971 TCGA-FY-A3R6-01 0 423 0 423 NA NA 0 423 #> 9972 TCGA-FY-A3R7-01 0 495 0 495 NA NA 0 495 #> 9973 TCGA-FY-A3R8-01 0 477 0 477 0 477 0 477 #> 9974 TCGA-FY-A3R9-01 0 504 0 504 0 504 0 504 #> 9975 TCGA-FY-A3RA-01 0 550 0 550 0 550 0 550 #> 9976 TCGA-FY-A3TY-01 0 709 0 709 0 709 0 709 #> 9977 TCGA-FY-A3TY-11 0 709 0 709 0 709 0 709 #> 9978 TCGA-FY-A3W9-01 0 658 0 658 NA NA 0 658 #> 9979 TCGA-FY-A3WA-01 0 519 0 519 0 519 0 519 #> 9980 TCGA-FY-A3YR-01 0 528 0 528 0 528 0 528 #> 9981 TCGA-FY-A40K-01 0 461 0 461 0 461 0 461 #> 9982 TCGA-FY-A40L-01 0 726 0 726 NA NA 0 726 #> 9983 TCGA-FY-A40M-01 0 684 0 684 0 684 0 684 #> 9984 TCGA-FY-A40N-01 0 579 0 579 0 579 0 579 #> 9985 TCGA-FY-A4B0-01 0 420 0 420 NA NA 0 420 #> 9986 TCGA-FY-A4B3-01 0 427 0 427 NA NA 0 427 #> 9987 TCGA-FY-A4B4-01 0 657 0 657 NA NA 0 657 #> 9988 TCGA-FY-A76V-01 0 51 0 51 0 51 0 51 #> 9989 TCGA-GE-A2C6-01 0 381 0 381 NA NA 0 381 #> 9990 TCGA-GE-A2C6-11 0 381 0 381 NA NA 0 381 #> 9991 TCGA-H2-A26U-01 0 517 0 517 NA NA 0 517 #> 9992 TCGA-H2-A2K9-01 0 659 0 659 NA NA 0 659 #> 9993 TCGA-H2-A2K9-11 0 659 0 659 NA NA 0 659 #> 9994 TCGA-H2-A3RH-01 0 379 0 379 NA NA 0 379 #> 9995 TCGA-H2-A3RI-01 0 335 0 335 NA NA 1 279 #> 9996 TCGA-H2-A3RI-11 0 335 0 335 NA NA 1 279 #> 9997 TCGA-H2-A421-01 0 610 0 610 NA NA 0 610 #> 9998 TCGA-H2-A422-01 0 566 0 566 NA NA 0 566 #> 9999 TCGA-IM-A3EB-01 0 1488 0 1488 0 1488 0 1488 #> 10000 TCGA-IM-A3ED-01 0 1442 0 1442 0 1442 0 1442 #> 10001 TCGA-IM-A3U2-01 0 563 0 563 NA NA 0 563 #> 10002 TCGA-IM-A3U3-01 0 514 0 514 NA NA 0 514 #> 10003 TCGA-IM-A41Y-01 0 664 0 664 0 664 0 664 #> 10004 TCGA-IM-A41Z-01 0 946 0 946 0 946 0 946 #> 10005 TCGA-IM-A420-01 0 250 0 250 0 250 0 250 #> 10006 TCGA-IM-A4EB-01 0 780 0 780 0 780 0 780 #> 10007 TCGA-J8-A3NZ-01 0 524 0 524 0 524 0 524 #> 10008 TCGA-J8-A3O0-01 0 1313 0 1313 0 1313 0 1313 #> 10009 TCGA-J8-A3O1-01 0 827 0 827 0 827 0 827 #> 10010 TCGA-J8-A3O2-06 0 342 0 342 NA NA 0 342 #> 10011 TCGA-J8-A3O2-01 0 342 0 342 NA NA 0 342 #> 10012 TCGA-J8-A3YD-01 0 968 0 968 0 968 0 968 #> 10013 TCGA-J8-A3YE-01 0 847 0 847 0 847 0 847 #> 10014 TCGA-J8-A3YF-01 0 751 0 751 0 751 0 751 #> 10015 TCGA-J8-A3YG-01 0 678 0 678 0 678 0 678 #> 10016 TCGA-J8-A3YH-06 0 175 0 175 0 175 0 175 #> 10017 TCGA-J8-A3YH-01 0 175 0 175 0 175 0 175 #> 10018 TCGA-J8-A42S-01 0 75 0 75 0 75 0 75 #> 10019 TCGA-J8-A4HW-06 0 79 0 79 0 79 0 79 #> 10020 TCGA-J8-A4HW-01 0 79 0 79 0 79 0 79 #> 10021 TCGA-J8-A4HY-01 0 6 0 6 NA NA 0 6 #> 10022 TCGA-KS-A41F-01 0 4367 0 4367 0 4367 0 4367 #> 10023 TCGA-KS-A41I-01 0 486 0 486 0 486 0 486 #> 10024 TCGA-KS-A41I-11 0 486 0 486 0 486 0 486 #> 10025 TCGA-KS-A41J-01 0 477 0 477 0 477 0 477 #> 10026 TCGA-KS-A41J-11 0 477 0 477 0 477 0 477 #> 10027 TCGA-KS-A41L-01 0 3463 0 3463 0 3463 0 3463 #> 10028 TCGA-KS-A41L-11 0 3463 0 3463 0 3463 0 3463 #> 10029 TCGA-KS-A4I1-01 0 812 0 812 NA NA 0 812 #> 10030 TCGA-KS-A4I3-01 0 1329 0 1329 NA NA 0 1329 #> 10031 TCGA-KS-A4I5-01 0 567 0 567 NA NA 0 567 #> 10032 TCGA-KS-A4I7-01 0 987 0 987 0 987 0 987 #> 10033 TCGA-KS-A4I9-01 0 2658 0 2658 0 2658 0 2658 #> 10034 TCGA-KS-A4IB-01 0 2577 0 2577 0 2577 0 2577 #> 10035 TCGA-KS-A4IC-01 0 1073 0 1073 NA NA 0 1073 #> 10036 TCGA-KS-A4ID-01 0 1011 0 1011 0 1011 0 1011 #> 10037 TCGA-L6-A4EP-01 0 1016 0 1016 0 1016 0 1016 #> 10038 TCGA-L6-A4EQ-01 0 1228 0 1228 0 1228 0 1228 #> 10039 TCGA-L6-A4ET-01 0 664 0 664 NA NA 0 664 #> 10040 TCGA-L6-A4EU-01 0 289 0 289 NA NA 0 289 #> 10041 TCGA-MK-A4N6-01 0 1098 0 1098 0 1098 0 1098 #> 10042 TCGA-MK-A4N7-01 0 987 0 987 0 987 0 987 #> 10043 TCGA-MK-A4N9-01 0 919 0 919 0 919 0 919 #> 10044 TCGA-MK-A84Z-01 0 728 0 728 NA NA 0 728 #> 10045 TCGA-QD-A8IV-01 0 392 0 392 NA NA 0 392 #> 10046 TCGA-3G-AB0O-01 0 2086 0 2086 NA NA 0 2086 #> 10047 TCGA-3G-AB0Q-01 0 1799 0 1799 NA NA 0 1799 #> 10048 TCGA-3G-AB0T-01 1 2488 1 2488 NA NA 1 1786 #> 10049 TCGA-3G-AB19-01 1 2910 0 2910 NA NA 1 2420 #> 10050 TCGA-3Q-A9WF-01 0 467 0 467 NA NA 0 467 #> 10051 TCGA-3S-A8YW-01 0 643 0 643 NA NA 1 224 #> 10052 TCGA-3S-AAYX-01 0 571 0 571 NA NA 0 571 #> 10053 TCGA-3T-AA9L-01 0 1050 0 1050 NA NA 1 702 #> 10054 TCGA-4V-A9QI-01 0 2936 0 2936 NA NA 0 2936 #> 10055 TCGA-4V-A9QJ-01 0 2849 0 2849 NA NA 1 793 #> 10056 TCGA-4V-A9QL-01 0 1908 0 1908 NA NA 0 1908 #> 10057 TCGA-4V-A9QM-01 0 1253 0 1253 NA NA 0 1253 #> 10058 TCGA-4V-A9QN-01 0 970 0 970 NA NA 1 937 #> 10059 TCGA-4V-A9QR-01 0 780 0 780 NA NA 0 780 #> 10060 TCGA-4V-A9QS-01 0 774 0 774 NA NA 1 752 #> 10061 TCGA-4V-A9QT-01 0 813 0 813 NA NA 0 813 #> 10062 TCGA-4V-A9QU-01 0 627 0 627 NA NA 0 627 #> 10063 TCGA-4V-A9QW-01 0 630 0 630 NA NA 0 630 #> 10064 TCGA-4V-A9QX-01 0 434 0 434 NA NA 0 434 #> 10065 TCGA-4X-A9F9-01 0 669 0 669 NA NA 0 669 #> 10066 TCGA-4X-A9FA-01 0 392 0 392 NA NA 0 392 #> 10067 TCGA-4X-A9FB-01 0 717 0 717 NA NA 0 717 #> 10068 TCGA-4X-A9FC-01 0 2072 0 2072 NA NA 0 2072 #> 10069 TCGA-4X-A9FD-01 0 1503 0 1503 NA NA 0 1503 #> 10070 TCGA-5G-A9ZZ-01 0 835 0 835 NA NA 0 835 #> 10071 TCGA-5K-AAAP-01 0 1054 0 1054 NA NA 0 1054 #> 10072 TCGA-5U-AB0D-01 0 714 0 714 NA NA 0 714 #> 10073 TCGA-5U-AB0E-01 0 687 0 687 NA NA 0 687 #> 10074 TCGA-5U-AB0F-01 0 459 0 459 NA NA 0 459 #> 10075 TCGA-5V-A9RR-01 0 827 0 827 NA NA 0 827 #> 10076 TCGA-X7-A8D6-01 0 4225 0 4225 NA NA 1 2928 #> 10077 TCGA-X7-A8D6-11 0 4225 0 4225 NA NA 1 2928 #> 10078 TCGA-X7-A8D7-01 0 325 0 325 NA NA 1 265 #> 10079 TCGA-X7-A8D7-11 0 325 0 325 NA NA 1 265 #> 10080 TCGA-X7-A8D8-01 0 58 0 58 NA NA 0 58 #> 10081 TCGA-X7-A8D9-01 0 NA 0 NA NA NA 0 NA #> 10082 TCGA-X7-A8DB-01 0 1992 0 1992 NA NA 0 1992 #> 10083 TCGA-X7-A8DD-01 0 1114 0 1114 NA NA 0 1114 #> 10084 TCGA-X7-A8DE-01 0 981 0 981 NA NA 0 981 #> 10085 TCGA-X7-A8DF-01 0 901 0 901 NA NA 0 901 #> 10086 TCGA-X7-A8DG-01 0 695 0 695 NA NA 0 695 #> 10087 TCGA-X7-A8DJ-01 0 289 0 289 NA NA 0 289 #> 10088 TCGA-X7-A8M0-01 0 441 0 441 NA NA 0 441 #> 10089 TCGA-X7-A8M1-01 0 1282 0 1282 NA NA 0 1282 #> 10090 TCGA-X7-A8M3-01 0 50 0 50 NA NA 0 50 #> 10091 TCGA-X7-A8M4-01 0 3808 0 3808 NA NA 0 3808 #> 10092 TCGA-X7-A8M5-01 0 1645 0 1645 NA NA 0 1645 #> 10093 TCGA-X7-A8M6-01 0 4575 0 4575 NA NA 1 1901 #> 10094 TCGA-X7-A8M7-01 0 1972 0 1972 NA NA 0 1972 #> 10095 TCGA-X7-A8M8-01 0 2533 0 2533 NA NA 0 2533 #> 10096 TCGA-XH-A853-01 0 1220 0 1220 NA NA 1 196 #> 10097 TCGA-XM-A8R8-01 0 1598 0 1598 NA NA 1 244 #> 10098 TCGA-XM-A8R9-01 0 1488 0 1488 NA NA 0 1488 #> 10099 TCGA-XM-A8RB-01 0 1144 0 1144 NA NA 0 1144 #> 10100 TCGA-XM-A8RC-01 0 2963 0 2963 NA NA 0 2963 #> 10101 TCGA-XM-A8RD-01 0 1546 0 1546 NA NA 0 1546 #> 10102 TCGA-XM-A8RE-01 0 422 0 422 NA NA 0 422 #> 10103 TCGA-XM-A8RF-01 0 797 0 797 NA NA 0 797 #> 10104 TCGA-XM-A8RG-01 0 386 0 386 NA NA 0 386 #> 10105 TCGA-XM-A8RH-01 0 363 0 363 NA NA 0 363 #> 10106 TCGA-XM-A8RI-01 0 387 0 387 NA NA 0 387 #> 10107 TCGA-XM-A8RL-01 0 2562 0 2562 NA NA 0 2562 #> 10108 TCGA-XM-AAZ1-01 0 397 0 397 NA NA 0 397 #> 10109 TCGA-XM-AAZ2-01 0 981 0 981 NA NA 0 981 #> 10110 TCGA-XM-AAZ3-01 0 1150 0 1150 NA NA 0 1150 #> 10111 TCGA-XU-A92O-01 0 3410 0 3410 NA NA 0 3410 #> 10112 TCGA-XU-A92Q-01 0 1092 0 1092 NA NA 0 1092 #> 10113 TCGA-XU-A92T-01 0 1376 0 1376 NA NA 0 1376 #> 10114 TCGA-XU-A92U-01 0 4562 0 4562 NA NA 0 4562 #> 10115 TCGA-XU-A92V-01 1 124 0 124 NA NA 0 124 #> 10116 TCGA-XU-A92W-01 0 3279 0 3279 NA NA 0 3279 #> 10117 TCGA-XU-A92X-01 0 2343 0 2343 NA NA 0 2343 #> 10118 TCGA-XU-A92Y-01 1 3488 1 3488 NA NA 1 1224 #> 10119 TCGA-XU-A92Z-01 0 3663 0 3663 NA NA 0 3663 #> 10120 TCGA-XU-A930-01 0 2514 0 2514 NA NA 0 2514 #> 10121 TCGA-XU-A931-01 1 1609 0 1609 NA NA 1 1377 #> 10122 TCGA-XU-A932-01 0 2149 0 2149 NA NA 0 2149 #> 10123 TCGA-XU-A933-01 0 1789 0 1789 NA NA 0 1789 #> 10124 TCGA-XU-A936-01 0 643 0 643 NA NA 0 643 #> 10125 TCGA-XU-AAXV-01 0 4070 0 4070 NA NA 0 4070 #> 10126 TCGA-XU-AAXW-01 0 3762 0 3762 NA NA 0 3762 #> 10127 TCGA-XU-AAXX-01 0 2721 0 2721 NA NA 0 2721 #> 10128 TCGA-XU-AAXY-01 0 1891 0 1891 NA NA 0 1891 #> 10129 TCGA-XU-AAXZ-01 0 1537 0 1537 NA NA 0 1537 #> 10130 TCGA-XU-AAY0-01 0 1502 0 1502 NA NA 0 1502 #> 10131 TCGA-XU-AAY1-01 0 3268 0 3268 NA NA 0 3268 #> 10132 TCGA-YT-A95D-01 0 750 0 750 NA NA 1 168 #> 10133 TCGA-YT-A95E-01 0 1070 0 1070 NA NA 0 1070 #> 10134 TCGA-YT-A95F-01 0 775 0 775 NA NA 0 775 #> 10135 TCGA-YT-A95G-01 0 1514 0 1514 NA NA 0 1514 #> 10136 TCGA-YT-A95H-01 0 711 0 711 NA NA 0 711 #> 10137 TCGA-ZB-A961-01 1 180 0 180 NA NA 0 180 #> 10138 TCGA-ZB-A962-01 0 1647 0 1647 NA NA 1 1091 #> 10139 TCGA-ZB-A963-01 0 1482 0 1482 NA NA 0 1482 #> 10140 TCGA-ZB-A964-01 0 1287 0 1287 NA NA 0 1287 #> 10141 TCGA-ZB-A965-01 0 816 0 816 NA NA 0 816 #> 10142 TCGA-ZB-A966-01 1 379 1 379 NA NA 1 296 #> 10143 TCGA-ZB-A969-01 0 1046 0 1046 NA NA 0 1046 #> 10144 TCGA-ZB-A96A-01 0 2354 0 2354 NA NA 0 2354 #> 10145 TCGA-ZB-A96B-01 0 2211 0 2211 NA NA 1 91 #> 10146 TCGA-ZB-A96C-01 0 2163 0 2163 NA NA 0 2163 #> 10147 TCGA-ZB-A96D-01 0 1960 0 1960 NA NA 0 1960 #> 10148 TCGA-ZB-A96E-01 0 1819 0 1819 NA NA 0 1819 #> 10149 TCGA-ZB-A96F-01 0 1761 0 1761 NA NA 0 1761 #> 10150 TCGA-ZB-A96G-01 0 1606 0 1606 NA NA 0 1606 #> 10151 TCGA-ZB-A96H-01 0 1504 0 1504 NA NA 0 1504 #> 10152 TCGA-ZB-A96I-01 0 1653 0 1653 NA NA 0 1653 #> 10153 TCGA-ZB-A96K-01 0 1388 0 1388 NA NA 0 1388 #> 10154 TCGA-ZB-A96L-01 0 1529 0 1529 NA NA 0 1529 #> 10155 TCGA-ZB-A96M-01 0 14 0 14 NA NA 0 14 #> 10156 TCGA-ZB-A96O-01 0 1050 0 1050 NA NA 0 1050 #> 10157 TCGA-ZB-A96P-01 0 753 0 753 NA NA 0 753 #> 10158 TCGA-ZB-A96Q-01 0 675 0 675 NA NA 0 675 #> 10159 TCGA-ZB-A96R-01 0 1804 0 1804 NA NA 0 1804 #> 10160 TCGA-ZB-A96V-01 0 932 0 932 NA NA 0 932 #> 10161 TCGA-ZC-AAA7-01 1 853 1 853 NA NA 1 853 #> 10162 TCGA-ZC-AAAA-01 0 819 0 819 NA NA 1 137 #> 10163 TCGA-ZC-AAAF-01 0 1165 0 1165 NA NA 0 1165 #> 10164 TCGA-ZC-AAAH-01 0 497 0 497 NA NA 1 166 #> 10165 TCGA-ZL-A9V6-01 0 2096 0 2096 NA NA 0 2096 #> 10166 TCGA-ZT-A8OM-01 0 1398 0 1398 NA NA 0 1398 #> 10167 TCGA-2E-A9G8-01 0 1249 0 1249 NA NA 1 335 #> 10168 TCGA-4E-A92E-01 0 13 0 13 0 13 0 13 #> 10169 TCGA-5B-A90C-01 0 1202 0 1202 NA NA 1 517 #> 10170 TCGA-5S-A9Q8-01 0 313 0 313 0 313 0 313 #> 10171 TCGA-A5-A1OH-01 0 1105 0 1105 0 1105 0 1105 #> 10172 TCGA-A5-A2K2-01 0 3595 0 3595 0 3595 0 3595 #> 10173 TCGA-A5-A2K3-01 0 2012 0 2012 0 2012 0 2012 #> 10174 TCGA-A5-A2K4-01 1 871 1 871 1 528 1 528 #> 10175 TCGA-A5-A2K5-01 0 752 0 752 0 752 0 752 #> 10176 TCGA-A5-A2K7-01 0 1063 0 1063 0 1063 0 1063 #> 10177 TCGA-A5-A3LO-01 0 776 0 776 0 776 0 776 #> 10178 TCGA-A5-A3LP-01 0 455 0 455 0 455 0 455 #> 10179 TCGA-A5-A7WJ-01 0 341 0 341 0 341 0 341 #> 10180 TCGA-A5-A7WK-01 0 560 0 560 1 350 1 350 #> 10181 TCGA-A5-AB3J-01 0 512 0 512 0 512 0 512 #> 10182 TCGA-AJ-A23N-01 1 439 1 439 NA NA 1 439 #> 10183 TCGA-AJ-A2QM-01 0 894 0 894 0 894 0 894 #> 10184 TCGA-AJ-A2QO-01 1 1045 0 1045 0 1045 0 1045 #> 10185 TCGA-AJ-A3BD-01 0 1039 0 1039 0 1039 0 1039 #> 10186 TCGA-AJ-A3BF-01 0 551 0 551 1 384 1 384 #> 10187 TCGA-AJ-A3BG-01 0 550 0 550 1 480 1 480 #> 10188 TCGA-AJ-A3BH-01 0 NA 0 NA NA NA 0 NA #> 10189 TCGA-AJ-A3BI-01 0 575 0 575 NA NA 1 373 #> 10190 TCGA-AJ-A3BK-01 0 1031 0 1031 0 1031 0 1031 #> 10191 TCGA-AJ-A3EJ-01 1 50 1 50 NA NA 1 50 #> 10192 TCGA-AJ-A3EK-01 0 446 0 446 0 446 0 446 #> 10193 TCGA-AJ-A3EL-01 0 684 0 684 0 684 0 684 #> 10194 TCGA-AJ-A3EM-01 0 677 0 677 0 677 0 677 #> 10195 TCGA-AJ-A3I9-01 1 519 1 519 1 370 1 370 #> 10196 TCGA-AJ-A3IA-01 0 633 0 633 0 633 0 633 #> 10197 TCGA-AJ-A3NC-01 0 1125 0 1125 0 1125 0 1125 #> 10198 TCGA-AJ-A3NC-11 0 1125 0 1125 0 1125 0 1125 #> 10199 TCGA-AJ-A3NE-01 0 628 0 628 0 628 0 628 #> 10200 TCGA-AJ-A3NE-11 0 628 0 628 0 628 0 628 #> 10201 TCGA-AJ-A3NF-01 0 645 0 645 0 645 0 645 #> 10202 TCGA-AJ-A3NG-01 0 475 0 475 0 475 0 475 #> 10203 TCGA-AJ-A3NH-01 1 310 0 310 0 310 0 310 #> 10204 TCGA-AJ-A3NH-11 1 310 0 310 0 310 0 310 #> 10205 TCGA-AJ-A3OJ-01 0 467 0 467 0 467 0 467 #> 10206 TCGA-AJ-A3OK-01 0 485 0 485 0 485 0 485 #> 10207 TCGA-AJ-A3OL-01 1 449 1 449 1 424 1 424 #> 10208 TCGA-AJ-A3QS-01 0 513 0 513 0 513 0 513 #> 10209 TCGA-AJ-A3TW-01 0 513 0 513 0 513 0 513 #> 10210 TCGA-AJ-A5DV-01 0 679 0 679 0 679 0 679 #> 10211 TCGA-AJ-A5DW-01 0 390 0 390 0 390 0 390 #> 10212 TCGA-AJ-A6NU-01 0 632 0 632 0 632 0 632 #> 10213 TCGA-AJ-A8CT-01 0 82 0 82 0 82 0 82 #> 10214 TCGA-AJ-A8CV-01 0 1068 0 1068 0 1068 0 1068 #> 10215 TCGA-AJ-A8CW-01 0 4 0 4 NA NA 0 4 #> 10216 TCGA-AP-A3K1-01 1 666 1 666 NA NA 1 198 #> 10217 TCGA-AP-A5FX-01 1 1099 1 1099 1 407 1 407 #> 10218 TCGA-AX-A05W-01 0 2450 0 2450 0 2450 0 2450 #> 10219 TCGA-AX-A05Y-11 0 2684 0 2684 1 194 1 194 #> 10220 TCGA-AX-A0IZ-11 0 1333 0 1333 0 1333 0 1333 #> 10221 TCGA-AX-A0J0-11 0 1220 0 1220 0 1220 0 1220 #> 10222 TCGA-AX-A1C7-01 0 1054 0 1054 NA NA 1 390 #> 10223 TCGA-AX-A2H4-01 1 916 1 916 1 520 1 520 #> 10224 TCGA-AX-A2HC-11 0 1044 0 1044 1 756 1 756 #> 10225 TCGA-AX-A2HD-11 0 1414 0 1414 NA NA 0 1414 #> 10226 TCGA-AX-A2HH-01 0 540 0 540 NA NA 0 540 #> 10227 TCGA-AX-A2IN-01 1 947 1 947 NA NA 1 257 #> 10228 TCGA-AX-A3FS-01 0 7 0 7 NA NA 0 7 #> 10229 TCGA-AX-A3FT-01 0 6 0 6 NA NA 0 6 #> 10230 TCGA-AX-A3FV-01 0 0 0 0 NA NA 0 0 #> 10231 TCGA-AX-A3FW-01 0 17 0 17 NA NA 0 17 #> 10232 TCGA-AX-A3FX-01 1 1333 NA 1333 NA NA 1 938 #> 10233 TCGA-AX-A3FZ-01 0 6 0 6 NA NA 0 6 #> 10234 TCGA-AX-A3G1-01 1 624 NA 624 NA NA 0 624 #> 10235 TCGA-AX-A3G3-01 0 42 0 42 NA NA 0 42 #> 10236 TCGA-AX-A3G4-01 0 9 0 9 NA NA 0 9 #> 10237 TCGA-AX-A3G6-01 0 8 0 8 NA NA 0 8 #> 10238 TCGA-AX-A3G7-01 0 9 0 9 NA NA 0 9 #> 10239 TCGA-AX-A3G8-01 0 36 0 36 NA NA 0 36 #> 10240 TCGA-AX-A3G9-01 0 558 0 558 NA NA 0 558 #> 10241 TCGA-AX-A3GB-01 0 440 0 440 NA NA 0 440 #> 10242 TCGA-AX-A3GI-01 0 12 0 12 NA NA 0 12 #> 10243 TCGA-B5-A0JN-01 0 2445 0 2445 NA NA 0 2445 #> 10244 TCGA-B5-A0JR-01 0 1731 0 1731 0 1731 0 1731 #> 10245 TCGA-B5-A0K9-01 1 409 0 409 0 409 0 409 #> 10246 TCGA-B5-A11R-01 0 2349 0 2349 0 2349 0 2349 #> 10247 TCGA-B5-A1MS-01 1 3112 1 3112 NA NA 1 2706 #> 10248 TCGA-B5-A1MW-01 0 447 0 447 1 311 1 311 #> 10249 TCGA-B5-A3F9-01 0 4155 0 4155 NA NA 0 4155 #> 10250 TCGA-B5-A3FA-01 0 2929 0 2929 NA NA 0 2929 #> 10251 TCGA-B5-A3FB-01 0 2844 0 2844 NA NA 0 2844 #> 10252 TCGA-B5-A3FC-01 0 2185 0 2185 NA NA 0 2185 #> 10253 TCGA-B5-A3FD-01 1 1197 0 1197 NA NA 1 562 #> 10254 TCGA-B5-A3FH-01 0 841 0 841 0 841 0 841 #> 10255 TCGA-B5-A3S1-01 0 902 0 902 0 902 0 902 #> 10256 TCGA-B5-A5OC-01 0 1249 0 1249 NA NA 0 1249 #> 10257 TCGA-B5-A5OD-01 0 1038 0 1038 NA NA 0 1038 #> 10258 TCGA-B5-A5OE-01 0 1063 0 1063 NA NA 0 1063 #> 10259 TCGA-BG-A0MK-01 1 1317 1 1317 NA NA 1 1317 #> 10260 TCGA-BG-A2AD-11 0 609 0 609 0 609 0 609 #> 10261 TCGA-BG-A3EW-01 0 344 0 344 0 344 0 344 #> 10262 TCGA-BG-A3EW-11 0 344 0 344 0 344 0 344 #> 10263 TCGA-BG-A3PP-01 0 681 0 681 NA NA 1 665 #> 10264 TCGA-BG-A3PP-11 0 681 0 681 NA NA 1 665 #> 10265 TCGA-BK-A0CA-01 0 1064 0 1064 0 1064 0 1064 #> 10266 TCGA-BK-A0CC-01 0 1067 0 1067 1 1010 1 1010 #> 10267 TCGA-BK-A139-02 1 943 1 943 NA NA 1 684 #> 10268 TCGA-BK-A139-01 1 943 1 943 NA NA 1 684 #> 10269 TCGA-BK-A13B-01 0 966 0 966 1 760 1 760 #> 10270 TCGA-BK-A26L-01 0 734 0 734 0 734 0 734 #> 10271 TCGA-BK-A4ZD-01 0 506 0 506 0 506 0 506 #> 10272 TCGA-BK-A4ZD-11 0 506 0 506 0 506 0 506 #> 10273 TCGA-BK-A56F-01 0 401 0 401 0 401 0 401 #> 10274 TCGA-BK-A6W3-01 0 305 0 305 0 305 0 305 #> 10275 TCGA-BK-A6W4-01 0 300 0 300 0 300 0 300 #> 10276 TCGA-BS-A0V4-01 0 1810 0 1810 0 1810 0 1810 #> 10277 TCGA-BS-A0V7-01 0 1934 0 1934 0 1934 0 1934 #> 10278 TCGA-D1-A2G0-01 0 1484 0 1484 NA NA 0 1484 #> 10279 TCGA-D1-A3DA-01 0 483 0 483 0 483 0 483 #> 10280 TCGA-D1-A3DG-01 1 130 0 130 NA NA 0 130 #> 10281 TCGA-D1-A3DH-01 0 573 0 573 0 573 0 573 #> 10282 TCGA-D1-A3JP-01 0 515 0 515 NA NA 0 515 #> 10283 TCGA-D1-A3JQ-01 0 526 0 526 0 526 0 526 #> 10284 TCGA-DF-A2KN-01 0 67 0 67 0 67 0 67 #> 10285 TCGA-DF-A2KR-01 0 2178 0 2178 0 2178 1 2113 #> 10286 TCGA-DF-A2KU-01 0 3067 0 3067 0 3067 0 3067 #> 10287 TCGA-DF-A2KV-01 0 2717 0 2717 NA NA 0 2717 #> 10288 TCGA-DF-A2KY-01 0 332 0 332 NA NA 0 332 #> 10289 TCGA-DF-A2KZ-01 0 826 0 826 NA NA 0 826 #> 10290 TCGA-DF-A2L0-01 1 788 1 788 1 523 1 523 #> 10291 TCGA-DI-A1BU-01 0 1195 0 1195 0 1195 0 1195 #> 10292 TCGA-DI-A1C3-01 0 739 0 739 0 739 0 739 #> 10293 TCGA-DI-A2QT-01 1 377 1 377 NA NA 1 377 #> 10294 TCGA-DI-A2QY-01 1 3349 0 3349 0 3349 0 3349 #> 10295 TCGA-DI-A2QY-11 1 3349 0 3349 0 3349 0 3349 #> 10296 TCGA-E6-A2P8-01 1 72 1 72 NA NA 1 60 #> 10297 TCGA-E6-A2P9-01 0 1386 0 1386 0 1386 0 1386 #> 10298 TCGA-E6-A8L9-01 0 1013 0 1013 0 1013 0 1013 #> 10299 TCGA-EO-A1Y7-01 0 1495 0 1495 NA NA 1 880 #> 10300 TCGA-EO-A22U-01 0 1407 0 1407 0 1407 0 1407 #> 10301 TCGA-EO-A22X-01 0 1752 0 1752 0 1752 0 1752 #> 10302 TCGA-EO-A22Y-01 0 1567 0 1567 0 1567 0 1567 #> 10303 TCGA-EO-A3AS-01 0 1046 0 1046 0 1046 0 1046 #> 10304 TCGA-EO-A3AU-01 0 1543 0 1543 0 1543 1 1178 #> 10305 TCGA-EO-A3AV-01 0 1069 0 1069 0 1069 0 1069 #> 10306 TCGA-EO-A3AY-01 0 1158 0 1158 1 1163 1 1163 #> 10307 TCGA-EO-A3AZ-01 0 826 0 826 0 826 0 826 #> 10308 TCGA-EO-A3B0-01 0 1412 0 1412 NA NA 0 1412 #> 10309 TCGA-EO-A3B1-01 0 820 0 820 0 820 0 820 #> 10310 TCGA-EO-A3KU-01 0 677 0 677 0 677 0 677 #> 10311 TCGA-EO-A3KW-01 0 497 0 497 0 497 0 497 #> 10312 TCGA-EO-A3KX-01 0 1170 0 1170 0 1170 0 1170 #> 10313 TCGA-EO-A3L0-01 0 1554 0 1554 0 1554 0 1554 #> 10314 TCGA-EY-A1GL-01 0 1014 0 1014 0 1014 0 1014 #> 10315 TCGA-EY-A1GO-01 0 586 0 586 1 517 1 517 #> 10316 TCGA-EY-A1GP-01 0 573 0 573 0 573 0 573 #> 10317 TCGA-EY-A1GX-01 1 1127 0 1127 1 743 1 743 #> 10318 TCGA-EY-A210-01 0 383 0 383 0 383 0 383 #> 10319 TCGA-EY-A2ON-01 1 610 1 610 NA NA 1 226 #> 10320 TCGA-EY-A2OO-01 0 1392 0 1392 0 1392 0 1392 #> 10321 TCGA-EY-A2OP-01 0 944 0 944 0 944 0 944 #> 10322 TCGA-EY-A2OQ-01 0 885 0 885 0 885 0 885 #> 10323 TCGA-EY-A3L3-01 0 832 0 832 0 832 0 832 #> 10324 TCGA-EY-A3QX-01 1 989 1 989 NA NA 1 896 #> 10325 TCGA-EY-A4KR-01 1 346 1 346 NA NA 1 346 #> 10326 TCGA-EY-A547-01 0 545 0 545 0 545 0 545 #> 10327 TCGA-EY-A548-01 0 430 0 430 0 430 0 430 #> 10328 TCGA-EY-A549-01 0 605 0 605 0 605 0 605 #> 10329 TCGA-EY-A54A-01 0 447 0 447 0 447 0 447 #> 10330 TCGA-EY-A5W2-01 0 516 0 516 0 516 0 516 #> 10331 TCGA-EY-A72D-01 0 179 0 179 0 179 0 179 #> 10332 TCGA-FI-A2EY-01 1 880 0 880 0 880 1 577 #> 10333 TCGA-FI-A3PV-01 1 1249 1 1249 NA NA 1 1249 #> 10334 TCGA-FI-A3PX-01 0 2384 0 2384 0 2384 0 2384 #> 10335 TCGA-H5-A2HR-01 0 53 0 53 NA NA 0 53 #> 10336 TCGA-JU-AAVI-01 1 540 1 540 1 505 1 505 #> 10337 TCGA-K6-A3WQ-01 1 427 1 427 NA NA 1 351 #> 10338 TCGA-KJ-A3U4-01 0 1095 0 1095 NA NA 1 306 #> 10339 TCGA-KP-A3VZ-01 0 722 0 722 NA NA 0 722 #> 10340 TCGA-KP-A3W0-01 0 404 0 404 0 404 0 404 #> 10341 TCGA-KP-A3W1-01 0 288 0 288 0 288 0 288 #> 10342 TCGA-KP-A3W3-01 0 794 0 794 1 661 1 661 #> 10343 TCGA-KP-A3W4-01 1 554 1 554 NA NA 1 321 #> 10344 TCGA-PG-A5BC-01 0 707 0 707 0 707 0 707 #> 10345 TCGA-PG-A6IB-01 0 648 0 648 0 648 0 648 #> 10346 TCGA-PG-A7D5-01 0 1177 0 1177 NA NA 0 1177 #> 10347 TCGA-PG-A914-01 0 687 0 687 0 687 0 687 #> 10348 TCGA-PG-A915-01 0 249 0 249 0 249 0 249 #> 10349 TCGA-PG-A916-01 0 522 0 522 0 522 0 522 #> 10350 TCGA-PG-A917-01 0 212 0 212 0 212 0 212 #> 10351 TCGA-QF-A5YS-01 0 689 0 689 0 689 0 689 #> 10352 TCGA-QF-A5YT-01 0 1215 0 1215 0 1215 0 1215 #> 10353 TCGA-QS-A5YQ-01 0 759 0 759 0 759 0 759 #> 10354 TCGA-QS-A5YR-01 0 719 0 719 NA NA 0 719 #> 10355 TCGA-QS-A744-01 0 451 0 451 NA NA 0 451 #> 10356 TCGA-QS-A8F1-01 1 135 1 135 NA NA 1 135 #> 10357 TCGA-SJ-A6ZI-01 0 631 0 631 0 631 0 631 #> 10358 TCGA-SJ-A6ZJ-01 0 556 0 556 0 556 0 556 #> 10359 TCGA-SL-A6J9-01 0 2 0 2 NA NA 0 2 #> 10360 TCGA-SL-A6JA-01 0 7 0 7 0 7 0 7 #> 10361 TCGA-N5-A4R8-01 1 3115 NA 3115 0 3115 0 3115 #> 10362 TCGA-N5-A4RA-01 1 1591 NA 1591 NA NA 0 1591 #> 10363 TCGA-N5-A4RD-01 1 142 1 142 NA NA 1 75 #> 10364 TCGA-N5-A4RF-01 0 1806 0 1806 0 1806 0 1806 #> 10365 TCGA-N5-A4RJ-01 1 550 1 550 NA NA 1 287 #> 10366 TCGA-N5-A4RM-01 1 148 1 148 NA NA 1 144 #> 10367 TCGA-N5-A4RN-01 0 1053 0 1053 NA NA 1 570 #> 10368 TCGA-N5-A4RO-01 1 685 1 685 NA NA 1 407 #> 10369 TCGA-N5-A4RS-01 1 911 1 911 1 427 1 427 #> 10370 TCGA-N5-A4RT-01 0 2485 0 2485 0 2485 0 2485 #> 10371 TCGA-N5-A4RU-01 1 1526 1 1526 1 253 1 253 #> 10372 TCGA-N5-A4RV-01 0 2042 0 2042 0 2042 0 2042 #> 10373 TCGA-N5-A59E-01 1 447 1 447 NA NA 1 354 #> 10374 TCGA-N5-A59F-01 1 361 1 361 1 274 1 274 #> 10375 TCGA-N6-A4V9-01 0 979 0 979 0 979 0 979 #> 10376 TCGA-N6-A4VC-01 1 597 1 597 NA NA 1 171 #> 10377 TCGA-N6-A4VD-01 1 112 1 112 NA NA 1 49 #> 10378 TCGA-N6-A4VE-01 1 291 1 291 NA NA 1 275 #> 10379 TCGA-N6-A4VF-01 1 522 0 522 NA NA 0 522 #> 10380 TCGA-N6-A4VG-01 0 1574 0 1574 NA NA 1 493 #> 10381 TCGA-N7-A4Y0-01 1 771 1 771 NA NA 1 281 #> 10382 TCGA-N7-A4Y5-01 1 8 1 8 NA NA 1 8 #> 10383 TCGA-N7-A4Y8-01 1 378 1 378 NA NA 1 187 #> 10384 TCGA-N7-A59B-01 0 827 0 827 0 827 0 827 #> 10385 TCGA-N8-A4PI-01 1 810 1 810 NA NA 1 255 #> 10386 TCGA-N8-A4PL-01 1 418 1 418 NA NA 1 138 #> 10387 TCGA-N8-A4PM-01 0 829 0 829 1 524 1 524 #> 10388 TCGA-N8-A4PN-01 0 812 0 812 0 812 0 812 #> 10389 TCGA-N8-A4PO-01 0 781 0 781 NA NA 1 158 #> 10390 TCGA-N8-A4PP-01 1 611 1 611 NA NA 1 149 #> 10391 TCGA-N8-A4PQ-01 0 572 0 572 0 572 0 572 #> 10392 TCGA-N8-A56S-01 1 371 1 371 NA NA 1 199 #> 10393 TCGA-N9-A4PZ-01 1 667 1 667 1 487 1 487 #> 10394 TCGA-N9-A4Q1-01 1 2043 1 2043 1 1839 1 1839 #> 10395 TCGA-N9-A4Q3-01 0 1672 0 1672 1 735 1 735 #> 10396 TCGA-N9-A4Q4-01 0 1089 0 1089 0 1089 0 1089 #> 10397 TCGA-N9-A4Q7-01 0 604 0 604 0 604 0 604 #> 10398 TCGA-N9-A4Q8-01 1 481 1 481 1 215 1 215 #> 10399 TCGA-NA-A4QV-01 0 4269 0 4269 0 4269 0 4269 #> 10400 TCGA-NA-A4QW-01 0 2457 0 2457 0 2457 0 2457 #> 10401 TCGA-NA-A4QX-01 1 838 1 838 NA NA 1 566 #> 10402 TCGA-NA-A4QY-01 1 114 1 114 NA NA 1 114 #> 10403 TCGA-NA-A4R0-01 1 541 1 541 NA NA 1 541 #> 10404 TCGA-NA-A4R1-01 1 203 1 203 NA NA 1 203 #> 10405 TCGA-NA-A5I1-01 1 2680 1 2680 1 2553 1 2553 #> 10406 TCGA-ND-A4W6-01 1 317 1 317 NA NA 1 317 #> 10407 TCGA-ND-A4WA-01 1 714 0 714 0 714 0 714 #> 10408 TCGA-ND-A4WC-01 0 766 0 766 0 766 0 766 #> 10409 TCGA-ND-A4WF-01 1 167 1 167 NA NA 1 167 #> 10410 TCGA-NF-A4WU-01 0 298 0 298 0 298 0 298 #> 10411 TCGA-NF-A4WX-01 0 452 0 452 NA NA 0 452 #> 10412 TCGA-NF-A4X2-01 0 81 0 81 0 81 0 81 #> 10413 TCGA-NF-A5CP-01 1 167 1 167 NA NA 1 106 #> 10414 TCGA-NG-A4VU-01 1 442 1 442 NA NA 1 281 #> 10415 TCGA-NG-A4VW-01 1 949 1 949 1 937 1 937 #> 10416 TCGA-QM-A5NM-01 0 587 0 587 NA NA 1 153 #> 10417 TCGA-QN-A5NN-01 0 0 0 0 0 0 0 0 #> 10418 TCGA-RZ-AB0B-01 1 149 1 149 NA NA 0 149 #> 10419 TCGA-V3-A9ZX-01 0 470 0 470 NA NA 1 233 #> 10420 TCGA-V3-A9ZY-01 0 459 0 459 NA NA 0 459 #> 10421 TCGA-V4-A9E5-01 0 2499 0 2499 NA NA 0 2499 #> 10422 TCGA-V4-A9E8-01 1 808 1 808 NA NA 1 557 #> 10423 TCGA-V4-A9E9-01 0 1246 0 1246 NA NA 0 1246 #> 10424 TCGA-V4-A9EA-01 0 1348 0 1348 NA NA 0 1348 #> 10425 TCGA-V4-A9EC-01 0 743 0 743 NA NA 0 743 #> 10426 TCGA-V4-A9ED-01 0 1078 0 1078 NA NA 0 1078 #> 10427 TCGA-V4-A9EE-01 1 398 1 398 NA NA 1 211 #> 10428 TCGA-V4-A9EF-01 0 1165 0 1165 NA NA 0 1165 #> 10429 TCGA-V4-A9EH-01 0 670 0 670 NA NA 0 670 #> 10430 TCGA-V4-A9EI-01 1 389 1 389 NA NA 1 203 #> 10431 TCGA-V4-A9EJ-01 0 746 0 746 NA NA 0 746 #> 10432 TCGA-V4-A9EK-01 0 1028 0 1028 NA NA 0 1028 #> 10433 TCGA-V4-A9EL-01 0 982 0 982 NA NA 1 413 #> 10434 TCGA-V4-A9EM-01 0 966 0 966 NA NA 0 966 #> 10435 TCGA-V4-A9EO-01 0 773 0 773 NA NA 0 773 #> 10436 TCGA-V4-A9EQ-01 1 455 1 455 NA NA 1 252 #> 10437 TCGA-V4-A9ES-01 0 1511 0 1511 NA NA 1 1299 #> 10438 TCGA-V4-A9ET-01 0 1362 0 1362 NA NA 0 1362 #> 10439 TCGA-V4-A9EU-01 0 709 0 709 NA NA 1 86 #> 10440 TCGA-V4-A9EV-01 1 1269 1 1269 NA NA 1 1269 #> 10441 TCGA-V4-A9EW-01 0 1211 0 1211 NA NA 1 197 #> 10442 TCGA-V4-A9EX-01 1 730 1 730 NA NA 1 381 #> 10443 TCGA-V4-A9EY-01 0 837 0 837 NA NA 0 837 #> 10444 TCGA-V4-A9EZ-01 0 599 0 599 NA NA 0 599 #> 10445 TCGA-V4-A9F0-01 1 945 1 945 NA NA 1 489 #> 10446 TCGA-V4-A9F1-01 0 938 0 938 NA NA 0 938 #> 10447 TCGA-V4-A9F2-01 0 734 0 734 NA NA 0 734 #> 10448 TCGA-V4-A9F3-01 1 873 1 873 NA NA 1 329 #> 10449 TCGA-V4-A9F4-01 0 634 0 634 NA NA 0 634 #> 10450 TCGA-V4-A9F5-01 0 203 0 203 NA NA 1 78 #> 10451 TCGA-V4-A9F7-01 0 1256 0 1256 NA NA 0 1256 #> 10452 TCGA-V4-A9F8-01 0 597 0 597 NA NA 0 597 #> 10453 TCGA-VD-A8K7-01 0 1459 0 1459 NA NA 0 1459 #> 10454 TCGA-VD-A8K8-01 1 1377 1 1377 NA NA 1 1377 #> 10455 TCGA-VD-A8K9-01 0 1424 0 1424 NA NA 0 1424 #> 10456 TCGA-VD-A8KA-01 0 1178 0 1178 NA NA 1 1008 #> 10457 TCGA-VD-A8KB-01 0 1354 0 1354 NA NA 1 1032 #> 10458 TCGA-VD-A8KD-01 1 114 1 114 NA NA 1 NA #> 10459 TCGA-VD-A8KE-01 0 821 0 821 NA NA 0 821 #> 10460 TCGA-VD-A8KF-01 1 40 1 40 NA NA 1 40 #> 10461 TCGA-VD-A8KG-01 0 19 0 19 NA NA 0 19 #> 10462 TCGA-VD-A8KH-01 0 1158 0 1158 NA NA 0 1158 #> 10463 TCGA-VD-A8KI-01 1 1113 1 1113 NA NA 1 1113 #> 10464 TCGA-VD-A8KJ-01 0 1150 0 1150 NA NA 0 1150 #> 10465 TCGA-VD-A8KK-01 0 64 0 64 NA NA 0 64 #> 10466 TCGA-VD-A8KL-01 0 638 0 638 NA NA 0 638 #> 10467 TCGA-VD-A8KM-01 0 4 0 4 NA NA 0 4 #> 10468 TCGA-VD-A8KN-01 0 68 0 68 NA NA 0 68 #> 10469 TCGA-VD-A8KO-01 0 795 0 795 NA NA 0 795 #> 10470 TCGA-VD-AA8M-01 0 6 0 6 NA NA 0 6 #> 10471 TCGA-VD-AA8N-01 0 44 0 44 NA NA 0 44 #> 10472 TCGA-VD-AA8O-01 1 606 1 606 NA NA 1 606 #> 10473 TCGA-VD-AA8P-01 0 86 0 86 NA NA 0 86 #> 10474 TCGA-VD-AA8Q-01 1 636 1 636 NA NA 0 636 #> 10475 TCGA-VD-AA8R-01 0 6 0 6 NA NA 0 6 #> 10476 TCGA-VD-AA8S-01 0 427 0 427 NA NA 0 427 #> 10477 TCGA-VD-AA8T-01 0 49 0 49 NA NA 0 49 #> 10478 TCGA-WC-A87T-01 0 2600 0 2600 NA NA 1 2020 #> 10479 TCGA-WC-A87U-01 1 1581 0 1581 NA NA 1 1581 #> 10480 TCGA-WC-A87W-01 0 1703 0 1703 NA NA 1 606 #> 10481 TCGA-WC-A87Y-01 1 1314 1 1314 NA NA 0 1314 #> 10482 TCGA-WC-A880-01 0 1258 0 1258 NA NA 0 1258 #> 10483 TCGA-WC-A881-01 0 1065 0 1065 NA NA 0 1065 #> 10484 TCGA-WC-A882-01 0 1112 0 1112 NA NA 0 1112 #> 10485 TCGA-WC-A883-01 1 241 1 241 NA NA 1 241 #> 10486 TCGA-WC-A884-01 0 12 0 12 NA NA 0 12 #> 10487 TCGA-WC-A885-01 0 686 0 686 NA NA 0 686 #> 10488 TCGA-WC-A888-01 1 575 0 575 NA NA 0 575 #> 10489 TCGA-WC-A88A-01 1 82 1 82 NA NA 1 82 #> 10490 TCGA-WC-AA9A-01 1 453 1 453 NA NA 1 371 #> 10491 TCGA-WC-AA9E-01 0 838 0 838 NA NA 0 838 #> 10492 TCGA-YZ-A980-01 0 1862 0 1862 NA NA 1 1556 #> 10493 TCGA-YZ-A982-01 0 495 0 495 NA NA 0 495 #> 10494 TCGA-YZ-A983-01 0 798 0 798 NA NA 0 798 #> 10495 TCGA-YZ-A984-01 1 1396 1 1396 NA NA 1 154 #> 10496 TCGA-YZ-A985-01 0 1184 0 1184 NA NA 0 1184 # \\donttest{ data2 <- load_data(\"tcga_armcalls\") #> Loading data from remote: https://zenodo.org/record/12819839/files/tcga_armcalls.rda, please wait... #> Data has been saved to /home/runner/work/_temp/Library/UCSCXenaShiny/extdata/tcga_armcalls.rda data2 #> Sample Type Aneuploidy Score 1p 1q 2p 2q 3p 3q 4p 4q 5p 5q 6p 6q #> 1 TCGA-18-3406-01 LUSC 8 -1 0 0 0 -1 NA 0 NA 0 0 NA NA #> 2 TCGA-18-3407-01 LUSC 25 0 NA 1 1 -1 1 -1 NA 0 0 NA 0 #> 3 TCGA-18-3408-01 LUSC 5 -1 1 0 0 -1 NA 0 0 0 -1 0 0 #> 4 TCGA-18-3410-01 LUSC 20 0 0 0 0 -1 1 1 1 1 -1 0 0 #> 5 TCGA-18-3411-01 LUSC 19 NA 1 1 1 -1 NA -1 NA 1 NA NA -1 #> 6 TCGA-18-3412-01 LUSC 17 -1 0 NA 0 -1 NA -1 -1 1 -1 NA NA #> 7 TCGA-18-3414-01 LUSC 11 0 1 NA 0 NA 1 0 0 1 -1 0 0 #> 8 TCGA-18-3415-01 LUSC 17 -1 1 1 NA -1 NA -1 -1 1 -1 0 -1 #> 9 TCGA-18-3416-01 LUSC 19 0 NA NA NA -1 NA -1 1 0 -1 -1 NA #> 10 TCGA-18-3417-01 LUSC 29 -1 1 1 NA -1 1 -1 -1 1 -1 -1 -1 #> 11 TCGA-18-3419-01 LUSC 11 0 0 1 0 NA 1 0 0 0 0 NA NA #> 12 TCGA-18-3421-01 LUSC 13 0 0 0 NA NA 1 NA NA 1 NA NA NA #> 13 TCGA-18-4083-01 LUSC 14 NA NA 0 NA -1 NA NA -1 1 -1 -1 -1 #> 14 TCGA-18-4086-01 LUSC 4 0 0 0 NA -1 1 0 NA NA -1 NA 0 #> 15 TCGA-18-4721-01 LUSC 9 -1 NA 0 0 -1 0 0 NA 0 -1 -1 0 #> 16 TCGA-18-5592-01 LUSC 12 -1 1 0 0 -1 0 -1 -1 1 -1 0 NA #> 17 TCGA-21-1071-01 LUSC 25 -1 1 1 1 NA 1 -1 -1 1 1 0 0 #> 18 TCGA-21-1072-01 LUSC 19 0 1 1 1 0 NA 0 -1 NA 0 1 -1 #> 19 TCGA-21-1075-01 LUSC 19 -1 1 0 NA -1 NA 0 -1 1 -1 0 0 #> 20 TCGA-21-1076-01 LUSC 32 -1 -1 1 1 -1 1 -1 -1 0 NA NA 1 #> 21 TCGA-21-1079-01 LUSC 19 0 0 1 0 -1 NA -1 0 1 -1 1 0 #> 22 TCGA-21-1080-01 LUSC 13 0 0 0 0 -1 1 -1 -1 1 NA 0 0 #> 23 TCGA-21-1081-01 LUSC 31 NA 1 0 0 -1 1 -1 -1 1 -1 NA -1 #> 24 TCGA-21-1082-01 LUSC 10 0 NA NA -1 NA 1 NA -1 NA -1 0 0 #> 25 TCGA-21-5782-01 LUSC 9 NA 0 0 NA -1 1 -1 NA 1 -1 0 NA #> 26 TCGA-21-5783-01 LUSC 17 0 0 NA 0 -1 1 0 0 1 0 NA 0 #> 27 TCGA-21-5784-01 LUSC 12 0 1 0 0 0 1 0 0 1 -1 0 0 #> 28 TCGA-21-5786-01 LUSC 24 -1 0 1 -1 -1 1 -1 -1 1 -1 0 NA #> 29 TCGA-21-5787-01 LUSC 23 NA NA 0 -1 -1 0 -1 -1 1 NA 1 -1 #> 30 TCGA-22-0940-01 LUSC 11 -1 0 0 NA -1 1 -1 0 1 0 -1 0 #> 31 TCGA-22-0944-01 LUSC 10 -1 0 1 NA -1 NA NA NA 1 -1 0 0 #> 32 TCGA-22-1000-01 LUSC 11 0 0 0 0 -1 1 -1 -1 0 0 0 0 #> 33 TCGA-22-1002-01 LUSC 9 0 -1 0 0 -1 1 0 0 1 -1 0 0 #> 34 TCGA-22-1005-01 LUSC 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 35 TCGA-22-1011-01 LUSC 18 0 0 0 NA 0 0 -1 -1 1 -1 -1 -1 #> 36 TCGA-22-1012-01 LUSC 22 NA 1 NA NA -1 1 -1 NA 1 -1 NA 1 #> 37 TCGA-22-1016-01 LUSC 22 NA 1 NA -1 -1 NA 0 0 0 -1 0 NA #> 38 TCGA-22-1017-01 LUSC 10 -1 NA 0 NA NA 0 1 0 NA 0 0 0 #> 39 TCGA-22-4591-01 LUSC 19 0 0 1 0 -1 1 1 0 1 -1 NA 0 #> 40 TCGA-22-4593-01 LUSC 17 -1 NA -1 -1 -1 NA -1 NA 1 -1 -1 NA #> 41 TCGA-22-4594-01 LUSC 23 NA 1 NA NA -1 0 -1 -1 1 NA 1 0 #> 42 TCGA-22-4595-01 LUSC 11 NA NA NA NA -1 1 -1 NA NA NA NA -1 #> 43 TCGA-22-4596-01 LUSC 6 0 1 0 0 NA 0 0 0 0 0 0 0 #> 44 TCGA-22-4599-01 LUSC 28 -1 1 1 0 -1 1 -1 -1 1 -1 -1 -1 #> 45 TCGA-22-4601-01 LUSC 8 NA NA NA NA -1 1 0 0 NA -1 1 NA #> 46 TCGA-22-4604-01 LUSC 21 NA 0 1 -1 -1 NA -1 NA NA -1 NA 0 #> 47 TCGA-22-4605-01 LUSC 22 1 1 1 NA -1 1 -1 -1 1 -1 1 1 #> 48 TCGA-22-4607-01 LUSC 12 0 1 0 0 -1 1 -1 -1 0 -1 1 -1 #> 49 TCGA-22-4609-01 LUSC 14 -1 0 0 0 -1 1 -1 0 1 -1 -1 0 #> 50 TCGA-22-4613-01 LUSC 12 0 0 NA NA -1 1 0 NA 1 -1 0 0 #> 51 TCGA-22-5471-01 LUSC 19 -1 1 1 -1 -1 NA -1 NA 0 -1 0 NA #> 52 TCGA-22-5472-01 LUSC 9 0 0 0 0 -1 1 -1 -1 0 -1 0 0 #> 53 TCGA-22-5473-01 LUSC 19 -1 0 1 0 -1 NA -1 -1 1 -1 -1 0 #> 54 TCGA-22-5474-01 LUSC 9 -1 1 0 NA NA NA -1 -1 1 -1 0 0 #> 55 TCGA-22-5477-01 LUSC 16 -1 NA 0 NA -1 NA -1 0 1 -1 -1 0 #> 56 TCGA-22-5478-01 LUSC 24 0 0 1 0 -1 0 1 0 1 -1 -1 -1 #> 57 TCGA-22-5479-01 LUSC 32 -1 1 1 1 -1 1 -1 -1 NA -1 -1 -1 #> 58 TCGA-22-5480-01 LUSC 9 0 1 1 NA -1 0 0 0 0 0 0 0 #> 59 TCGA-22-5481-01 LUSC 15 NA 1 NA 0 -1 0 0 NA 1 NA NA NA #> 60 TCGA-22-5482-01 LUSC 14 0 0 0 0 -1 1 0 NA 1 -1 NA 1 #> 61 TCGA-22-5483-01 LUSC 26 -1 1 1 1 -1 1 -1 -1 1 -1 NA 1 #> 62 TCGA-22-5485-01 LUSC 13 0 1 0 0 -1 NA -1 -1 1 -1 0 0 #> 63 TCGA-22-5489-01 LUSC 11 0 1 NA 1 NA 1 -1 -1 0 0 0 0 #> 64 TCGA-22-5491-01 LUSC 16 NA 0 0 NA -1 1 -1 -1 0 -1 -1 0 #> 65 TCGA-22-5492-01 LUSC 9 0 0 NA 0 -1 1 0 0 1 NA NA -1 #> 66 TCGA-22-A5C4-01 LUSC 17 NA 0 NA -1 -1 NA NA NA 1 -1 NA -1 #> 67 TCGA-33-4532-01 LUSC 24 -1 -1 1 NA -1 1 -1 -1 NA -1 -1 -1 #> 68 TCGA-33-4533-01 LUSC 10 NA 1 NA NA NA NA -1 -1 NA -1 0 0 #> 69 TCGA-33-4538-01 LUSC 20 -1 1 0 NA -1 NA -1 -1 1 -1 0 0 #> 70 TCGA-33-4547-01 LUSC 13 0 0 0 0 NA 1 -1 0 1 -1 -1 1 #> 71 TCGA-33-4566-01 LUSC 19 -1 1 0 0 -1 0 -1 -1 1 -1 NA -1 #> 72 TCGA-33-4582-01 LUSC 15 NA 0 NA NA -1 NA -1 -1 0 -1 NA NA #> 73 TCGA-33-4583-01 LUSC 26 -1 1 0 1 -1 1 -1 -1 1 1 0 0 #> 74 TCGA-33-4586-01 LUSC 24 -1 1 0 0 -1 1 -1 -1 NA -1 0 0 #> 75 TCGA-33-4587-01 LUSC 18 NA 1 0 0 -1 NA -1 -1 1 -1 1 1 #> 76 TCGA-33-4589-01 LUSC 26 -1 -1 NA -1 -1 1 -1 -1 -1 -1 -1 NA #> 77 TCGA-33-6738-01 LUSC 18 0 0 1 0 -1 0 0 0 1 -1 0 NA #> 78 TCGA-33-A4WN-01 LUSC 6 NA 1 NA 0 -1 1 NA NA NA 0 0 0 #> 79 TCGA-33-A5GW-01 LUSC 10 -1 0 0 0 -1 1 0 NA 0 NA 0 0 #> 80 TCGA-33-AAS8-01 LUSC 10 -1 0 0 0 -1 NA 0 0 0 -1 NA 0 #> 81 TCGA-33-AASB-01 LUSC 16 -1 NA 0 0 -1 1 -1 NA 1 -1 NA NA #> 82 TCGA-33-AASD-01 LUSC 26 0 1 1 1 -1 1 -1 1 0 -1 -1 0 #> 83 TCGA-33-AASI-01 LUSC 12 -1 0 0 0 NA NA NA 0 0 -1 1 -1 #> 84 TCGA-33-AASJ-01 LUSC 19 0 0 1 NA -1 NA -1 -1 1 -1 0 0 #> 85 TCGA-33-AASL-01 LUSC 13 -1 NA 0 0 NA 1 -1 NA 0 NA NA NA #> 86 TCGA-34-2596-01 LUSC 16 -1 0 NA NA -1 1 NA -1 0 -1 -1 -1 #> 87 TCGA-34-2600-01 LUSC 19 -1 1 0 0 -1 1 -1 -1 1 -1 0 0 #> 88 TCGA-34-2604-01 LUSC 24 0 0 1 -1 -1 1 -1 -1 1 -1 -1 -1 #> 89 TCGA-34-2605-01 LUSC 23 -1 0 NA NA -1 1 -1 -1 1 -1 NA NA #> 90 TCGA-34-2608-01 LUSC 8 0 0 0 0 -1 1 0 0 1 -1 0 0 #> 91 TCGA-34-2609-01 LUSC 18 -1 -1 NA -1 NA NA NA NA 1 -1 0 NA #> 92 TCGA-34-5231-01 LUSC 27 -1 1 1 NA -1 NA -1 0 -1 -1 0 -1 #> 93 TCGA-34-5232-01 LUSC 8 0 0 0 0 -1 1 -1 NA 0 0 NA 0 #> 94 TCGA-34-5234-01 LUSC 3 0 0 0 0 0 0 0 0 0 NA -1 -1 #> 95 TCGA-34-5236-01 LUSC 17 0 NA 1 NA -1 1 -1 NA 1 -1 0 0 #> 96 TCGA-34-5239-01 LUSC 21 0 1 0 0 -1 0 0 0 1 -1 0 0 #> 97 TCGA-34-5240-01 LUSC 28 0 0 0 NA -1 1 NA -1 1 -1 -1 -1 #> 98 TCGA-34-5241-01 LUSC 13 0 0 0 0 -1 1 0 -1 1 -1 0 0 #> 99 TCGA-34-5927-01 LUSC 9 0 0 0 0 -1 1 -1 -1 0 -1 0 0 #> 100 TCGA-34-5928-01 LUSC 27 -1 NA NA -1 -1 1 -1 -1 1 -1 1 -1 #> 101 TCGA-34-5929-01 LUSC 11 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 102 TCGA-34-7107-01 LUSC 22 -1 1 NA NA -1 1 -1 -1 1 -1 NA NA #> 103 TCGA-34-8454-01 LUSC 7 0 0 NA 0 -1 NA 0 0 0 -1 0 0 #> 104 TCGA-34-8455-01 LUSC 24 1 1 1 1 -1 1 0 0 1 -1 0 0 #> 105 TCGA-34-8456-01 LUSC 23 -1 0 1 0 -1 NA -1 1 1 -1 NA NA #> 106 TCGA-34-A5IX-01 LUSC 27 1 1 NA 1 -1 1 0 NA 1 -1 -1 0 #> 107 TCGA-37-3783-01 LUSC 10 0 1 NA 0 -1 1 -1 0 1 0 0 NA #> 108 TCGA-37-3789-01 LUSC 9 0 0 0 0 -1 1 -1 0 NA 0 0 0 #> 109 TCGA-37-3792-01 LUSC 23 NA 0 0 0 -1 NA -1 -1 NA NA -1 -1 #> 110 TCGA-37-4129-01 LUSC 4 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 111 TCGA-37-4130-01 LUSC 23 NA -1 NA NA -1 1 1 NA 1 -1 NA NA #> 112 TCGA-37-4132-01 LUSC 7 0 0 0 0 -1 NA 0 0 0 -1 0 0 #> 113 TCGA-37-4133-01 LUSC 17 0 1 1 0 -1 1 -1 -1 1 -1 1 NA #> 114 TCGA-37-4135-01 LUSC 25 0 1 0 0 -1 1 -1 -1 1 -1 0 1 #> 115 TCGA-37-4141-01 LUSC 14 0 0 0 -1 -1 1 -1 -1 1 NA 0 0 #> 116 TCGA-37-5819-01 LUSC 20 -1 NA NA 0 NA 1 -1 -1 NA NA -1 NA #> 117 TCGA-37-A5EL-01 LUSC 21 -1 NA NA NA -1 1 -1 -1 NA -1 NA -1 #> 118 TCGA-37-A5EN-01 LUSC 18 -1 1 1 0 -1 NA -1 -1 -1 -1 NA 0 #> 119 TCGA-39-5011-01 LUSC 17 -1 -1 0 0 -1 NA 0 NA NA -1 0 0 #> 120 TCGA-39-5016-01 LUSC 23 -1 1 1 NA -1 NA -1 0 1 -1 -1 -1 #> 121 TCGA-39-5019-01 LUSC 9 0 0 0 0 0 1 0 0 0 0 0 0 #> 122 TCGA-39-5021-01 LUSC 12 0 NA 0 0 -1 NA 0 -1 1 -1 0 -1 #> 123 TCGA-39-5022-01 LUSC 7 0 0 NA 0 -1 1 0 0 1 0 0 -1 #> 124 TCGA-39-5024-01 LUSC 4 0 0 0 0 -1 1 0 0 1 0 0 0 #> 125 TCGA-39-5027-01 LUSC 15 -1 0 0 0 -1 1 -1 -1 0 -1 -1 -1 #> 126 TCGA-39-5028-01 LUSC 29 NA -1 -1 -1 -1 1 1 1 1 1 NA NA #> 127 TCGA-39-5029-01 LUSC 16 NA -1 NA 0 NA 1 0 0 1 -1 NA 0 #> 128 TCGA-39-5030-01 LUSC 12 0 0 0 0 -1 1 0 0 1 -1 0 0 #> 129 TCGA-39-5031-01 LUSC 19 NA 0 NA 0 NA 1 -1 NA 1 -1 -1 -1 #> 130 TCGA-39-5034-01 LUSC 14 NA NA NA 0 -1 0 0 -1 NA 0 0 -1 #> 131 TCGA-39-5035-01 LUSC 17 NA 1 1 1 -1 1 -1 -1 1 0 NA 0 #> 132 TCGA-39-5036-01 LUSC 18 0 0 0 NA -1 1 -1 -1 0 -1 -1 NA #> 133 TCGA-39-5037-01 LUSC 22 -1 1 1 NA -1 NA -1 -1 NA -1 NA -1 #> 134 TCGA-39-5039-01 LUSC 11 0 0 0 0 -1 NA 0 0 1 -1 -1 -1 #> 135 TCGA-39-5040-01 LUSC 15 NA NA 1 1 0 1 -1 -1 0 0 0 0 #> 136 TCGA-43-2576-01 LUSC 29 NA NA 1 1 -1 1 1 NA 1 -1 1 1 #> 137 TCGA-43-2578-01 LUSC 9 NA 0 NA 0 NA 1 -1 -1 NA -1 NA NA #> 138 TCGA-43-2581-01 LUSC 19 -1 1 1 1 -1 0 0 0 1 -1 0 -1 #> 139 TCGA-43-3394-01 LUSC 25 -1 0 1 NA -1 1 -1 -1 1 -1 1 0 #> 140 TCGA-43-3920-01 LUSC 20 NA 1 0 NA -1 1 1 -1 1 -1 0 1 #> 141 TCGA-43-5668-01 LUSC 18 0 0 1 1 0 0 0 0 1 -1 0 NA #> 142 TCGA-43-5670-01 LUSC 20 -1 -1 NA 0 NA 0 -1 -1 1 NA NA -1 #> 143 TCGA-43-6143-01 LUSC 18 NA 1 1 NA -1 1 NA 0 1 NA NA -1 #> 144 TCGA-43-6647-01 LUSC 9 0 0 0 0 -1 NA 0 NA 1 -1 0 -1 #> 145 TCGA-43-6770-01 LUSC 8 NA 0 0 0 -1 NA NA 0 NA -1 0 NA #> 146 TCGA-43-6771-01 LUSC 6 0 0 0 0 0 0 -1 -1 0 0 0 0 #> 147 TCGA-43-6773-01 LUSC 4 NA NA 0 NA 0 0 0 0 0 0 0 0 #> 148 TCGA-43-7656-01 LUSC 13 0 0 0 0 -1 NA -1 NA 1 -1 0 0 #> 149 TCGA-43-7657-01 LUSC 22 -1 0 0 -1 -1 1 -1 -1 1 NA 0 0 #> 150 TCGA-43-7658-01 LUSC 18 NA NA NA 0 -1 1 0 -1 1 -1 NA 0 #> 151 TCGA-43-8115-01 LUSC 10 NA NA 1 0 -1 NA -1 -1 0 0 NA -1 #> 152 TCGA-43-8116-01 LUSC 12 0 0 0 NA -1 NA 1 NA 1 -1 0 0 #> 153 TCGA-43-8118-01 LUSC 14 NA 0 NA NA -1 1 -1 NA 1 -1 -1 NA #> 154 TCGA-43-A474-01 LUSC 19 -1 1 0 NA -1 NA -1 -1 1 -1 -1 0 #> 155 TCGA-43-A475-01 LUSC 14 NA 1 0 0 0 NA 0 0 NA 0 NA 0 #> 156 TCGA-43-A56U-01 LUSC 5 0 0 0 0 NA NA 0 NA NA 0 0 0 #> 157 TCGA-43-A56V-01 LUSC 17 -1 0 0 0 -1 1 -1 -1 1 -1 -1 0 #> 158 TCGA-46-3765-01 LUSC 15 NA 0 1 NA NA 1 -1 -1 1 -1 0 -1 #> 159 TCGA-46-3766-01 LUSC 11 0 0 0 0 -1 1 0 0 NA -1 0 0 #> 160 TCGA-46-3767-01 LUSC 10 0 0 NA 0 -1 1 NA 0 1 NA 1 1 #> 161 TCGA-46-3768-01 LUSC 27 -1 1 1 1 NA 1 0 -1 1 -1 NA 1 #> 162 TCGA-46-3769-01 LUSC 18 0 0 0 NA -1 0 0 -1 1 -1 NA NA #> 163 TCGA-46-6025-01 LUSC 19 NA 0 1 NA NA 1 -1 NA 1 -1 NA -1 #> 164 TCGA-46-6026-01 LUSC 26 -1 -1 0 0 -1 1 -1 -1 1 -1 1 1 #> 165 TCGA-51-4079-01 LUSC 8 NA NA 0 0 -1 NA 0 -1 NA -1 0 0 #> 166 TCGA-51-4080-01 LUSC 10 -1 1 1 NA -1 1 0 0 0 NA 0 0 #> 167 TCGA-51-4081-01 LUSC 17 -1 0 0 NA -1 1 -1 -1 1 -1 -1 -1 #> 168 TCGA-52-7622-01 LUSC 14 -1 1 0 0 -1 NA 0 NA 1 -1 0 0 #> 169 TCGA-52-7809-01 LUSC 17 -1 1 1 NA -1 1 -1 -1 1 -1 NA NA #> 170 TCGA-52-7810-01 LUSC 22 NA NA 0 NA NA NA -1 NA 1 -1 0 0 #> 171 TCGA-52-7811-01 LUSC 14 -1 NA 1 NA -1 NA -1 -1 1 -1 NA 1 #> 172 TCGA-52-7812-01 LUSC 7 NA NA 0 0 NA 0 -1 0 NA 0 0 -1 #> 173 TCGA-56-1622-01 LUSC 18 0 0 NA 0 -1 NA -1 NA NA -1 0 0 #> 174 TCGA-56-5897-01 LUSC 12 0 0 0 0 -1 1 0 0 0 -1 0 0 #> 175 TCGA-56-5898-01 LUSC 28 -1 1 1 1 -1 1 0 0 1 -1 1 1 #> 176 TCGA-56-6545-01 LUSC 20 -1 1 0 NA NA NA -1 NA 1 NA 1 -1 #> 177 TCGA-56-6546-01 LUSC 11 0 0 0 0 0 0 0 0 1 -1 0 0 #> 178 TCGA-56-7221-01 LUSC 14 -1 0 0 0 -1 0 -1 -1 1 -1 0 0 #> 179 TCGA-56-7222-01 LUSC 25 0 0 1 1 -1 0 -1 -1 1 -1 NA 0 #> 180 TCGA-56-7223-01 LUSC 20 -1 1 0 0 -1 1 -1 -1 0 NA 0 NA #> 181 TCGA-56-7579-01 LUSC 12 0 0 NA NA -1 NA -1 NA 0 NA NA 0 #> 182 TCGA-56-7580-01 LUSC 31 0 1 1 1 -1 1 1 1 1 -1 1 1 #> 183 TCGA-56-7582-01 LUSC 23 NA 1 1 NA -1 1 -1 -1 1 NA NA NA #> 184 TCGA-56-7730-01 LUSC 20 -1 NA 1 NA -1 1 -1 -1 NA -1 1 NA #> 185 TCGA-56-7731-01 LUSC 10 0 0 0 0 -1 1 0 0 1 -1 0 0 #> 186 TCGA-56-7822-01 LUSC 25 -1 -1 0 0 -1 1 0 0 1 -1 -1 1 #> 187 TCGA-56-7823-01 LUSC 8 -1 0 0 0 -1 NA -1 -1 0 -1 0 0 #> 188 TCGA-56-8082-01 LUSC 14 NA 0 0 0 -1 1 1 NA 0 -1 NA 1 #> 189 TCGA-56-8083-01 LUSC 8 0 0 0 0 -1 NA -1 NA 1 -1 0 0 #> 190 TCGA-56-8201-01 LUSC 22 0 0 1 NA -1 1 -1 -1 1 0 0 0 #> 191 TCGA-56-8304-01 LUSC 13 NA -1 0 NA -1 1 -1 -1 1 -1 0 0 #> 192 TCGA-56-8305-01 LUSC 18 -1 1 NA NA -1 1 0 NA 1 -1 0 0 #> 193 TCGA-56-8307-01 LUSC 26 1 1 0 0 -1 1 1 1 1 NA 1 1 #> 194 TCGA-56-8308-01 LUSC 17 NA 0 NA NA -1 1 -1 -1 0 -1 1 0 #> 195 TCGA-56-8309-01 LUSC 12 0 0 0 0 -1 1 0 0 1 -1 NA 0 #> 196 TCGA-56-8503-01 LUSC 17 0 0 0 0 -1 1 0 NA NA -1 0 0 #> 197 TCGA-56-8504-01 LUSC 27 -1 0 0 NA -1 1 -1 -1 0 -1 -1 -1 #> 198 TCGA-56-8622-01 LUSC 8 0 0 0 0 NA NA 0 0 1 -1 0 0 #> 199 TCGA-56-8623-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 200 TCGA-56-8624-01 LUSC 18 0 0 0 0 -1 1 0 0 1 1 -1 -1 #> 201 TCGA-56-8625-01 LUSC 6 NA 0 NA 0 NA 1 NA NA 1 -1 NA -1 #> 202 TCGA-56-8626-01 LUSC 14 0 0 0 0 -1 1 0 0 1 -1 NA 0 #> 203 TCGA-56-8628-01 LUSC 16 0 NA 1 0 -1 1 0 0 1 -1 0 0 #> 204 TCGA-56-8629-01 LUSC 22 0 0 1 NA -1 1 0 NA 1 -1 1 0 #> 205 TCGA-56-A49D-01 LUSC 18 NA -1 NA 0 -1 1 NA -1 0 -1 0 NA #> 206 TCGA-56-A4BW-01 LUSC 16 0 0 NA 0 -1 1 -1 0 1 NA 0 0 #> 207 TCGA-56-A4BX-01 LUSC 17 -1 0 0 NA -1 NA -1 -1 1 -1 0 0 #> 208 TCGA-56-A4BY-01 LUSC 15 0 0 NA NA -1 1 0 0 1 -1 NA NA #> 209 TCGA-56-A4ZJ-01 LUSC 9 0 0 0 0 -1 1 0 NA 1 -1 0 0 #> 210 TCGA-56-A5DS-01 LUSC 12 0 0 1 1 -1 1 0 0 1 -1 0 0 #> 211 TCGA-56-A62T-01 LUSC 25 -1 -1 0 NA -1 1 -1 NA 1 0 0 0 #> 212 TCGA-58-8386-01 LUSC 20 0 0 0 0 -1 1 0 0 1 -1 NA NA #> 213 TCGA-58-8387-01 LUSC 10 0 NA NA 0 NA 1 -1 0 1 -1 0 NA #> 214 TCGA-58-8388-01 LUSC 11 0 1 0 0 -1 1 0 0 1 -1 0 0 #> 215 TCGA-58-8390-01 LUSC 15 0 NA 0 0 -1 1 0 NA 1 -1 0 0 #> 216 TCGA-58-8391-01 LUSC 14 NA NA 1 1 -1 NA 0 NA 1 -1 NA 0 #> 217 TCGA-58-8393-01 LUSC 21 -1 1 0 -1 NA 1 -1 -1 0 -1 1 -1 #> 218 TCGA-58-A46J-01 LUSC 11 0 0 0 0 0 1 -1 -1 1 -1 0 0 #> 219 TCGA-58-A46K-01 LUSC 20 -1 0 0 NA -1 1 -1 -1 1 -1 0 NA #> 220 TCGA-58-A46L-01 LUSC 10 -1 NA 1 NA NA 1 -1 -1 NA -1 0 0 #> 221 TCGA-58-A46M-01 LUSC 19 -1 1 1 1 NA 1 -1 NA 1 NA 0 NA #> 222 TCGA-58-A46N-01 LUSC 15 0 1 1 1 0 1 0 0 1 0 0 0 #> 223 TCGA-60-2695-01 LUSC 22 0 NA -1 -1 -1 1 NA -1 1 -1 NA -1 #> 224 TCGA-60-2697-01 LUSC 1 0 0 0 0 0 0 0 0 1 0 0 0 #> 225 TCGA-60-2698-01 LUSC 21 -1 NA 0 NA -1 NA -1 -1 0 -1 NA 0 #> 226 TCGA-60-2703-01 LUSC 23 0 0 1 NA -1 1 -1 NA 1 -1 1 1 #> 227 TCGA-60-2704-01 LUSC 27 0 0 0 0 -1 1 -1 -1 1 -1 -1 -1 #> 228 TCGA-60-2706-01 LUSC 22 NA 0 0 0 -1 1 0 NA NA -1 1 0 #> 229 TCGA-60-2707-01 LUSC 6 0 0 0 0 -1 1 0 0 1 -1 0 NA #> 230 TCGA-60-2708-01 LUSC 33 -1 0 0 0 -1 1 -1 -1 -1 -1 -1 -1 #> 231 TCGA-60-2709-01 LUSC 31 1 1 1 1 -1 1 -1 -1 1 -1 0 -1 #> 232 TCGA-60-2710-01 LUSC 12 0 0 0 0 -1 1 -1 0 1 -1 0 0 #> 233 TCGA-60-2711-01 LUSC 21 NA NA 1 NA -1 NA -1 NA 1 -1 NA NA #> 234 TCGA-60-2713-01 LUSC 13 NA NA 0 NA -1 1 -1 -1 1 -1 0 0 #> 235 TCGA-60-2714-01 LUSC 25 -1 -1 NA 0 0 NA 0 -1 1 -1 1 1 #> 236 TCGA-60-2716-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 237 TCGA-60-2719-01 LUSC 14 0 0 0 0 -1 NA -1 -1 1 -1 0 0 #> 238 TCGA-60-2720-01 LUSC 13 0 0 0 0 NA 0 -1 -1 1 -1 0 0 #> 239 TCGA-60-2721-01 LUSC 10 NA 1 0 0 -1 1 -1 NA 0 -1 NA 0 #> 240 TCGA-60-2722-01 LUSC 17 -1 NA NA -1 -1 NA -1 NA -1 -1 0 -1 #> 241 TCGA-60-2723-01 LUSC 21 0 0 NA 0 -1 1 -1 -1 1 -1 NA NA #> 242 TCGA-60-2724-01 LUSC 11 0 0 0 0 -1 NA -1 -1 NA -1 0 0 #> 243 TCGA-60-2725-01 LUSC 14 0 0 0 0 -1 1 0 0 0 -1 -1 0 #> 244 TCGA-60-2726-01 LUSC 21 -1 0 NA 0 -1 1 -1 NA 1 -1 NA NA #> 245 TCGA-63-5128-01 LUSC 24 -1 1 0 NA -1 1 -1 -1 1 -1 0 NA #> 246 TCGA-63-5131-01 LUSC 16 NA 1 NA NA -1 1 -1 NA 1 -1 NA 0 #> 247 TCGA-63-6202-01 LUSC 15 0 0 1 NA 0 0 1 0 1 0 0 -1 #> 248 TCGA-63-7020-01 LUSC 31 0 0 0 0 -1 1 -1 -1 1 -1 -1 -1 #> 249 TCGA-63-7021-01 LUSC 6 0 0 0 0 -1 1 0 NA 0 0 -1 0 #> 250 TCGA-63-7022-01 LUSC 4 0 0 0 0 0 1 0 0 1 0 0 0 #> 251 TCGA-63-7023-01 LUSC 12 -1 0 1 NA -1 NA -1 -1 -1 -1 0 0 #> 252 TCGA-63-A5M9-01 LUSC 19 -1 1 NA NA -1 1 0 NA NA -1 0 NA #> 253 TCGA-63-A5MB-01 LUSC 19 -1 NA 1 NA -1 NA NA -1 NA -1 NA NA #> 254 TCGA-63-A5MG-01 LUSC 11 0 0 0 0 NA 0 NA -1 NA -1 0 0 #> 255 TCGA-63-A5MH-01 LUSC 19 0 0 0 -1 -1 NA NA NA 1 -1 0 0 #> 256 TCGA-63-A5MI-01 LUSC 19 NA 0 1 NA -1 NA 0 0 1 -1 NA NA #> 257 TCGA-63-A5MJ-01 LUSC 23 -1 1 1 NA -1 1 NA -1 1 NA -1 1 #> 258 TCGA-63-A5ML-01 LUSC 22 -1 1 0 -1 -1 1 -1 -1 1 -1 0 -1 #> 259 TCGA-63-A5MM-01 LUSC 5 0 0 0 0 -1 0 0 0 0 0 0 0 #> 260 TCGA-63-A5MN-01 LUSC 6 0 0 0 0 0 0 0 0 NA 1 0 0 #> 261 TCGA-63-A5MP-01 LUSC 13 -1 -1 NA NA -1 NA 0 NA 1 -1 NA 0 #> 262 TCGA-63-A5MR-01 LUSC 21 -1 0 1 NA -1 1 -1 -1 0 0 -1 -1 #> 263 TCGA-63-A5MS-01 LUSC 24 -1 1 1 1 -1 1 NA 0 1 -1 1 1 #> 264 TCGA-63-A5MT-01 LUSC 9 0 NA NA 0 NA 0 0 NA 0 -1 0 NA #> 265 TCGA-63-A5MU-01 LUSC 16 0 1 1 1 -1 1 0 NA 1 -1 0 0 #> 266 TCGA-63-A5MV-01 LUSC 13 0 0 NA NA -1 1 0 0 1 -1 0 0 #> 267 TCGA-63-A5MW-01 LUSC 19 0 NA NA NA 0 1 0 -1 1 -1 1 0 #> 268 TCGA-63-A5MY-01 LUSC 10 0 0 NA NA NA 1 -1 NA 1 -1 0 NA #> 269 TCGA-66-2727-01 LUSC 15 NA 1 0 NA -1 1 NA NA 1 NA NA NA #> 270 TCGA-66-2734-01 LUSC 14 0 0 0 0 -1 1 -1 -1 0 -1 0 0 #> 271 TCGA-66-2737-01 LUSC 6 -1 1 0 0 0 NA -1 NA 1 0 0 0 #> 272 TCGA-66-2742-01 LUSC 21 NA NA 0 0 -1 1 -1 -1 1 -1 0 0 #> 273 TCGA-66-2744-01 LUSC 9 0 NA 0 NA 0 1 NA 0 1 0 NA 0 #> 274 TCGA-66-2753-01 LUSC 18 0 0 0 0 0 NA NA -1 1 -1 0 0 #> 275 TCGA-66-2754-01 LUSC 12 NA 0 0 0 -1 0 -1 -1 1 NA NA NA #> 276 TCGA-66-2755-01 LUSC 17 -1 1 0 NA -1 1 0 0 1 -1 0 NA #> 277 TCGA-66-2756-01 LUSC 24 -1 1 NA NA -1 NA -1 -1 1 -1 -1 -1 #> 278 TCGA-66-2757-01 LUSC 15 0 0 0 0 -1 1 0 -1 1 -1 0 0 #> 279 TCGA-66-2758-01 LUSC 16 -1 NA 0 NA -1 1 NA NA 1 NA -1 -1 #> 280 TCGA-66-2759-01 LUSC 19 NA 1 0 1 NA 1 -1 0 1 0 0 1 #> 281 TCGA-66-2763-01 LUSC 8 NA 0 0 NA NA 1 0 -1 0 -1 0 NA #> 282 TCGA-66-2765-01 LUSC 10 0 0 0 0 -1 1 -1 -1 0 NA 1 1 #> 283 TCGA-66-2766-01 LUSC 13 -1 0 NA NA NA 1 NA NA 1 -1 1 0 #> 284 TCGA-66-2767-01 LUSC 19 -1 0 1 NA -1 1 -1 0 0 0 0 0 #> 285 TCGA-66-2768-01 LUSC 6 0 0 0 0 -1 NA 0 0 1 NA 0 0 #> 286 TCGA-66-2769-01 LUSC 20 0 0 NA 0 -1 NA 0 0 1 -1 1 1 #> 287 TCGA-66-2770-01 LUSC 9 -1 0 0 0 -1 NA -1 -1 0 0 0 0 #> 288 TCGA-66-2771-01 LUSC 11 0 0 NA 0 -1 1 -1 NA 1 -1 NA NA #> 289 TCGA-66-2773-01 LUSC 20 -1 NA NA 0 -1 1 -1 -1 NA -1 0 -1 #> 290 TCGA-66-2777-01 LUSC 27 -1 1 1 NA -1 1 -1 -1 1 -1 1 0 #> 291 TCGA-66-2778-01 LUSC 10 0 0 0 0 -1 1 -1 NA 1 -1 0 0 #> 292 TCGA-66-2780-01 LUSC 16 0 0 0 0 -1 1 -1 -1 0 -1 0 NA #> 293 TCGA-66-2781-01 LUSC 22 -1 0 NA 0 -1 1 -1 NA NA -1 1 1 #> 294 TCGA-66-2782-01 LUSC 13 0 0 0 0 -1 0 0 0 0 -1 0 0 #> 295 TCGA-66-2783-01 LUSC 11 0 NA 0 0 -1 1 -1 0 0 NA NA -1 #> 296 TCGA-66-2785-01 LUSC 17 NA 1 0 NA NA NA -1 -1 1 -1 1 NA #> 297 TCGA-66-2786-01 LUSC 16 0 0 0 NA -1 0 -1 NA 1 -1 -1 1 #> 298 TCGA-66-2787-01 LUSC 24 -1 1 1 NA -1 1 0 -1 NA -1 NA 0 #> 299 TCGA-66-2788-01 LUSC 12 0 0 0 0 -1 0 0 0 1 -1 NA NA #> 300 TCGA-66-2789-01 LUSC 14 0 0 1 0 NA 1 0 0 1 -1 -1 0 #> 301 TCGA-66-2790-01 LUSC 12 -1 0 NA 0 -1 1 0 0 NA NA 0 0 #> 302 TCGA-66-2791-01 LUSC 13 -1 0 NA NA -1 NA -1 -1 NA -1 0 NA #> 303 TCGA-66-2792-01 LUSC 23 -1 0 1 NA -1 NA -1 -1 1 -1 -1 NA #> 304 TCGA-66-2793-01 LUSC 26 NA 1 1 0 -1 1 1 -1 -1 -1 1 1 #> 305 TCGA-66-2794-01 LUSC 10 -1 0 0 0 0 NA -1 NA 1 -1 NA 0 #> 306 TCGA-66-2795-01 LUSC 8 -1 NA NA 0 -1 1 -1 -1 NA 0 0 NA #> 307 TCGA-66-2800-01 LUSC 24 -1 0 1 NA -1 1 -1 NA 1 -1 0 0 #> 308 TCGA-68-7755-01 LUSC 14 -1 -1 1 NA -1 NA -1 -1 0 -1 -1 -1 #> 309 TCGA-68-7756-01 LUSC 8 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 310 TCGA-68-7757-01 LUSC 12 NA 0 0 0 -1 0 0 -1 1 -1 -1 0 #> 311 TCGA-68-8250-01 LUSC 19 0 0 NA NA -1 1 1 NA 1 -1 0 0 #> 312 TCGA-68-8251-01 LUSC 24 0 NA 0 0 -1 1 0 0 1 -1 NA 1 #> 313 TCGA-68-A59I-01 LUSC 15 0 0 1 NA -1 NA 0 -1 1 -1 -1 NA #> 314 TCGA-68-A59J-01 LUSC 19 -1 1 NA NA NA NA -1 NA 1 0 NA 0 #> 315 TCGA-6A-AB49-01 LUSC 17 0 0 0 NA -1 0 NA -1 1 -1 NA -1 #> 316 TCGA-70-6722-01 LUSC 22 NA -1 0 -1 -1 0 1 -1 NA -1 0 0 #> 317 TCGA-70-6723-01 LUSC 13 -1 NA 1 NA -1 NA -1 -1 NA -1 NA NA #> 318 TCGA-77-6842-01 LUSC 22 0 0 1 1 -1 1 0 NA 1 -1 0 0 #> 319 TCGA-77-6843-01 LUSC 8 NA 1 0 0 -1 1 0 NA 0 0 0 0 #> 320 TCGA-77-6844-01 LUSC 11 0 NA 0 0 -1 1 0 0 1 -1 0 0 #> 321 TCGA-77-6845-01 LUSC 16 NA 1 1 NA -1 1 -1 0 1 NA NA 0 #> 322 TCGA-77-7139-01 LUSC 19 -1 1 NA NA -1 1 -1 -1 1 -1 0 0 #> 323 TCGA-77-7140-01 LUSC 16 -1 0 NA NA -1 NA -1 NA NA -1 -1 -1 #> 324 TCGA-77-7141-01 LUSC 22 -1 1 1 0 -1 1 0 -1 0 -1 NA -1 #> 325 TCGA-77-7142-01 LUSC 20 NA -1 1 NA -1 1 -1 -1 NA NA NA 0 #> 326 TCGA-77-7335-01 LUSC 12 0 0 1 0 -1 1 -1 NA NA 0 0 0 #> 327 TCGA-77-7337-01 LUSC 14 -1 0 0 NA -1 1 NA 0 1 -1 NA 0 #> 328 TCGA-77-7338-01 LUSC 9 NA 1 0 0 -1 1 0 NA 1 -1 NA 0 #> 329 TCGA-77-7463-01 LUSC 26 NA 1 0 0 -1 NA -1 -1 1 -1 -1 -1 #> 330 TCGA-77-7465-01 LUSC 17 -1 NA NA NA -1 NA -1 -1 1 -1 0 0 #> 331 TCGA-77-8007-01 LUSC 22 0 0 0 NA 0 0 1 0 1 -1 NA -1 #> 332 TCGA-77-8008-01 LUSC 14 0 1 0 0 -1 1 0 0 1 -1 0 0 #> 333 TCGA-77-8009-01 LUSC 24 -1 1 1 NA -1 1 -1 -1 1 NA -1 -1 #> 334 TCGA-77-8128-01 LUSC 16 -1 1 0 0 NA NA -1 -1 1 -1 -1 0 #> 335 TCGA-77-8130-01 LUSC 27 0 0 NA NA -1 NA 0 0 1 -1 1 1 #> 336 TCGA-77-8131-01 LUSC 10 0 0 0 0 0 0 0 0 0 0 -1 NA #> 337 TCGA-77-8133-01 LUSC 21 -1 1 0 0 -1 1 -1 -1 1 0 0 0 #> 338 TCGA-77-8136-01 LUSC 14 0 0 NA NA -1 NA NA -1 NA -1 0 0 #> 339 TCGA-77-8138-01 LUSC 25 1 0 1 1 -1 1 -1 -1 1 -1 NA 1 #> 340 TCGA-77-8139-01 LUSC 25 0 -1 0 0 -1 NA -1 -1 1 -1 NA 0 #> 341 TCGA-77-8140-01 LUSC 14 0 0 0 0 -1 1 0 NA 1 -1 NA 0 #> 342 TCGA-77-8143-01 LUSC 20 0 0 NA 0 NA 1 0 0 1 -1 0 0 #> 343 TCGA-77-8144-01 LUSC 13 NA 0 0 0 -1 NA -1 -1 0 0 0 NA #> 344 TCGA-77-8145-01 LUSC 13 0 1 0 NA -1 1 -1 0 1 -1 0 0 #> 345 TCGA-77-8148-01 LUSC 20 0 1 1 NA -1 1 -1 -1 1 -1 0 0 #> 346 TCGA-77-8150-01 LUSC 21 NA NA 1 NA -1 1 -1 -1 1 -1 -1 -1 #> 347 TCGA-77-8153-01 LUSC 13 NA 0 0 NA -1 NA -1 -1 1 -1 0 0 #> 348 TCGA-77-8154-01 LUSC 11 0 NA 0 NA -1 NA -1 0 1 -1 0 0 #> 349 TCGA-77-8156-01 LUSC 23 0 NA 1 NA -1 NA -1 -1 1 -1 1 -1 #> 350 TCGA-77-A5FZ-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 351 TCGA-77-A5G1-01 LUSC 12 0 0 0 0 -1 NA 0 0 1 -1 0 0 #> 352 TCGA-77-A5G3-01 LUSC 17 -1 NA NA NA -1 1 -1 NA 0 -1 -1 -1 #> 353 TCGA-77-A5G6-01 LUSC 18 0 NA NA 0 -1 1 1 -1 1 -1 0 NA #> 354 TCGA-77-A5G7-01 LUSC 13 0 0 0 0 -1 1 -1 NA NA -1 0 0 #> 355 TCGA-77-A5G8-01 LUSC 23 -1 1 0 0 -1 1 -1 -1 1 -1 -1 -1 #> 356 TCGA-77-A5GB-01 LUSC 9 0 0 0 NA NA NA -1 -1 0 -1 0 -1 #> 357 TCGA-77-A5GF-01 LUSC 26 -1 1 0 NA -1 1 -1 -1 0 -1 NA -1 #> 358 TCGA-77-A5GH-01 LUSC 15 0 0 0 NA -1 1 0 NA 1 -1 0 0 #> 359 TCGA-79-5596-01 LUSC 9 -1 0 0 NA -1 NA -1 0 0 -1 0 0 #> 360 TCGA-85-6175-01 LUSC 23 -1 -1 0 0 -1 NA -1 -1 NA 0 -1 -1 #> 361 TCGA-85-6560-01 LUSC 25 0 0 1 0 -1 1 -1 -1 1 -1 NA 0 #> 362 TCGA-85-6561-01 LUSC 12 -1 0 0 0 -1 1 -1 NA -1 -1 0 0 #> 363 TCGA-85-6798-01 LUSC 19 0 NA 1 NA -1 NA 0 -1 1 -1 1 1 #> 364 TCGA-85-7696-01 LUSC 9 -1 1 0 0 NA 1 -1 NA 1 NA 0 0 #> 365 TCGA-85-7697-01 LUSC 12 0 0 0 0 -1 1 -1 0 0 -1 NA 0 #> 366 TCGA-85-7698-01 LUSC 8 -1 NA 0 NA -1 0 -1 0 NA -1 0 NA #> 367 TCGA-85-7699-01 LUSC 14 0 0 0 -1 -1 NA -1 -1 1 -1 0 0 #> 368 TCGA-85-7710-01 LUSC 8 NA NA 0 NA -1 1 0 0 1 -1 NA -1 #> 369 TCGA-85-7843-01 LUSC 23 -1 -1 1 NA NA 1 -1 NA 1 -1 NA 1 #> 370 TCGA-85-7844-01 LUSC 20 0 NA 0 0 -1 1 -1 -1 1 -1 0 NA #> 371 TCGA-85-7950-01 LUSC 26 NA 0 0 0 -1 1 0 0 1 -1 -1 NA #> 372 TCGA-85-8048-01 LUSC 9 0 0 0 0 NA NA -1 -1 1 0 0 0 #> 373 TCGA-85-8049-01 LUSC 28 -1 1 0 0 -1 1 -1 -1 0 0 NA 0 #> 374 TCGA-85-8052-01 LUSC 22 NA 1 1 0 -1 1 -1 -1 0 -1 1 NA #> 375 TCGA-85-8070-01 LUSC 8 NA 0 NA 0 -1 NA NA NA 1 -1 -1 0 #> 376 TCGA-85-8071-01 LUSC 11 NA 0 0 0 -1 0 -1 0 1 -1 0 0 #> 377 TCGA-85-8072-01 LUSC 19 -1 1 1 NA -1 1 -1 NA 1 -1 NA -1 #> 378 TCGA-85-8276-01 LUSC 24 0 1 1 NA NA 1 -1 -1 1 -1 1 1 #> 379 TCGA-85-8277-01 LUSC 18 -1 1 0 NA -1 NA -1 -1 0 -1 -1 -1 #> 380 TCGA-85-8287-01 LUSC 20 -1 0 0 NA NA 1 0 0 1 -1 1 NA #> 381 TCGA-85-8288-01 LUSC 12 0 0 0 -1 -1 1 NA 0 1 -1 0 0 #> 382 TCGA-85-8350-01 LUSC 21 0 0 NA -1 -1 1 -1 -1 1 NA NA -1 #> 383 TCGA-85-8351-01 LUSC 15 NA 1 0 0 -1 1 -1 NA 1 -1 0 NA #> 384 TCGA-85-8352-01 LUSC 17 -1 1 NA 0 NA 1 -1 -1 NA -1 NA NA #> 385 TCGA-85-8353-01 LUSC 14 -1 NA 0 0 -1 1 -1 -1 0 -1 0 0 #> 386 TCGA-85-8354-01 LUSC 14 0 NA NA 1 NA NA -1 1 0 -1 NA NA #> 387 TCGA-85-8355-01 LUSC 9 0 0 0 NA -1 1 0 0 -1 -1 0 0 #> 388 TCGA-85-8479-01 LUSC 10 0 1 0 0 NA NA 0 -1 NA NA 0 -1 #> 389 TCGA-85-8481-01 LUSC 13 0 0 0 0 -1 NA 0 0 1 -1 0 0 #> 390 TCGA-85-8580-01 LUSC 11 0 0 0 0 -1 1 -1 NA NA -1 0 0 #> 391 TCGA-85-8582-01 LUSC 25 -1 0 -1 NA 0 NA -1 -1 1 -1 0 -1 #> 392 TCGA-85-8584-01 LUSC 7 NA 0 0 0 0 0 0 0 0 0 1 NA #> 393 TCGA-85-8664-01 LUSC 25 0 1 1 -1 -1 1 -1 -1 1 0 0 NA #> 394 TCGA-85-8666-01 LUSC 26 0 1 1 NA -1 NA -1 -1 1 -1 -1 1 #> 395 TCGA-85-A4CL-01 LUSC 10 -1 1 0 0 -1 1 -1 NA 0 0 -1 0 #> 396 TCGA-85-A4CN-01 LUSC 15 -1 0 0 NA -1 NA -1 -1 0 -1 NA 0 #> 397 TCGA-85-A4JB-01 LUSC 22 NA -1 1 -1 -1 0 NA NA NA -1 0 0 #> 398 TCGA-85-A4JC-01 LUSC 22 NA 0 NA 0 -1 1 0 0 1 -1 -1 -1 #> 399 TCGA-85-A4PA-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 400 TCGA-85-A4QQ-01 LUSC 12 0 0 0 0 -1 1 0 -1 1 NA NA 0 #> 401 TCGA-85-A4QR-01 LUSC 23 NA 0 NA 1 -1 1 -1 -1 1 -1 1 -1 #> 402 TCGA-85-A50M-01 LUSC 21 1 1 NA NA 0 0 0 0 1 -1 NA -1 #> 403 TCGA-85-A50Z-01 LUSC 8 0 0 0 0 -1 NA 0 NA NA 0 NA NA #> 404 TCGA-85-A510-01 LUSC 23 -1 NA 0 0 -1 1 -1 -1 1 -1 NA -1 #> 405 TCGA-85-A511-01 LUSC 19 -1 1 NA NA -1 1 NA NA 1 -1 1 0 #> 406 TCGA-85-A512-01 LUSC 11 -1 NA 0 0 -1 NA -1 NA NA -1 NA 0 #> 407 TCGA-85-A513-01 LUSC 4 0 0 0 0 NA NA 0 0 0 NA 0 0 #> 408 TCGA-85-A53L-01 LUSC 14 NA NA NA 0 -1 1 -1 NA 0 -1 0 0 #> 409 TCGA-85-A5B5-01 LUSC 26 -1 1 1 NA -1 1 -1 0 NA -1 -1 -1 #> 410 TCGA-90-7766-01 LUSC 12 0 0 0 0 -1 1 -1 0 1 -1 NA 0 #> 411 TCGA-90-7767-01 LUSC 21 NA 1 NA 0 -1 1 1 0 1 -1 -1 NA #> 412 TCGA-90-7769-01 LUSC 17 -1 -1 0 NA -1 NA -1 NA 1 -1 NA NA #> 413 TCGA-90-7964-01 LUSC 11 1 1 0 0 -1 NA -1 -1 NA -1 0 0 #> 414 TCGA-90-A4ED-01 LUSC 17 NA 1 1 1 0 0 0 0 0 0 0 0 #> 415 TCGA-90-A4EE-01 LUSC 19 -1 1 NA -1 -1 1 -1 -1 NA -1 0 0 #> 416 TCGA-90-A59Q-01 LUSC 26 NA 1 1 1 -1 1 -1 -1 NA NA NA 1 #> 417 TCGA-92-7340-01 LUSC 6 0 0 0 NA 0 NA -1 NA 1 -1 0 0 #> 418 TCGA-92-7341-01 LUSC 23 -1 0 NA NA -1 NA -1 NA 1 -1 -1 -1 #> 419 TCGA-92-8063-01 LUSC 14 0 0 0 0 -1 1 -1 -1 0 -1 NA 0 #> 420 TCGA-92-8064-01 LUSC 23 -1 1 0 -1 -1 1 -1 NA 1 -1 NA 0 #> 421 TCGA-92-8065-01 LUSC 10 0 NA 0 NA -1 1 -1 -1 0 0 NA 0 #> 422 TCGA-94-7033-01 LUSC 7 0 0 0 0 -1 1 NA NA NA -1 0 NA #> 423 TCGA-94-7557-01 LUSC 28 1 1 1 1 -1 1 NA -1 1 -1 0 0 #> 424 TCGA-94-7943-01 LUSC 26 -1 1 1 0 -1 1 -1 -1 1 -1 NA 1 #> 425 TCGA-94-8035-01 LUSC 11 NA 0 0 0 -1 1 -1 NA 1 -1 0 0 #> 426 TCGA-94-8490-01 LUSC 8 -1 NA 1 NA -1 1 -1 NA 0 -1 NA 0 #> 427 TCGA-94-8491-01 LUSC 7 NA NA 1 NA NA NA 0 0 1 NA NA NA #> 428 TCGA-94-A4VJ-01 LUSC 19 0 1 1 0 -1 1 1 NA NA NA 0 1 #> 429 TCGA-94-A5I4-01 LUSC 25 -1 NA NA NA -1 NA -1 NA -1 -1 -1 1 #> 430 TCGA-94-A5I6-01 LUSC 26 NA 1 1 NA -1 1 -1 -1 1 0 0 0 #> 431 TCGA-96-7544-01 LUSC 12 -1 0 0 NA -1 1 0 NA 1 -1 -1 0 #> 432 TCGA-96-7545-01 LUSC 11 -1 0 NA 0 -1 NA 0 NA 1 -1 NA 0 #> 433 TCGA-96-8169-01 LUSC 14 0 1 0 0 -1 1 0 0 1 -1 0 0 #> 434 TCGA-96-8170-01 LUSC 12 0 0 0 0 -1 1 0 0 1 0 0 0 #> 435 TCGA-96-A4JL-01 LUSC 7 NA 1 0 0 NA NA 0 0 0 0 0 0 #> 436 TCGA-98-7454-01 LUSC 16 0 0 0 0 -1 NA -1 -1 -1 -1 0 0 #> 437 TCGA-98-8020-01 LUSC 20 0 0 0 NA NA 1 -1 -1 1 -1 0 0 #> 438 TCGA-98-8021-01 LUSC 13 0 0 0 0 -1 1 NA -1 0 -1 0 0 #> 439 TCGA-98-8022-01 LUSC 20 1 1 NA 0 -1 1 NA -1 1 -1 1 NA #> 440 TCGA-98-8023-01 LUSC 19 -1 0 NA NA -1 NA 0 0 1 -1 0 NA #> 441 TCGA-98-A538-01 LUSC 22 0 0 0 0 -1 1 -1 NA 1 -1 0 -1 #> 442 TCGA-98-A539-01 LUSC 20 -1 NA 0 0 -1 0 -1 -1 1 -1 0 0 #> 443 TCGA-98-A53A-01 LUSC 14 0 NA 0 0 -1 1 NA 0 0 -1 0 0 #> 444 TCGA-98-A53B-01 LUSC 28 NA NA NA 0 -1 1 -1 -1 1 -1 1 1 #> 445 TCGA-98-A53C-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 446 TCGA-98-A53D-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 447 TCGA-98-A53H-01 LUSC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 448 TCGA-98-A53I-01 LUSC 11 -1 NA 1 0 -1 1 -1 -1 1 0 0 NA #> 449 TCGA-98-A53J-01 LUSC 28 -1 1 1 1 -1 1 -1 -1 1 1 -1 1 #> 450 TCGA-J1-A4AH-01 LUSC 23 -1 1 NA NA -1 1 0 NA 1 -1 NA -1 #> 451 TCGA-L3-A4E7-01 LUSC 9 0 0 0 0 -1 0 -1 0 1 -1 NA 0 #> 452 TCGA-L3-A524-01 LUSC 22 -1 1 1 NA 0 1 -1 -1 1 0 0 -1 #> 453 TCGA-LA-A446-01 LUSC 16 -1 NA NA NA -1 1 0 NA 1 -1 1 NA #> 454 TCGA-LA-A7SW-01 LUSC 9 0 1 0 0 NA NA NA NA 1 0 NA NA #> 455 TCGA-MF-A522-01 LUSC 30 -1 1 1 1 -1 1 0 -1 1 -1 1 1 #> 456 TCGA-NC-A5HD-01 LUSC 22 NA 1 0 NA -1 1 -1 -1 1 -1 NA 0 #> 457 TCGA-NC-A5HE-01 LUSC 12 -1 1 0 NA -1 NA -1 -1 0 0 0 0 #> 458 TCGA-NC-A5HF-01 LUSC 12 0 0 0 0 -1 0 -1 -1 1 -1 0 0 #> 459 TCGA-NC-A5HG-01 LUSC 19 -1 1 0 0 -1 0 -1 0 0 -1 0 NA #> 460 TCGA-NC-A5HH-01 LUSC 8 0 NA NA 0 0 1 0 0 1 0 NA NA #> 461 TCGA-NC-A5HI-01 LUSC 12 NA 0 0 0 -1 1 -1 -1 0 NA 0 0 #> 462 TCGA-NC-A5HJ-01 LUSC 17 NA NA 0 NA -1 1 -1 NA 1 -1 NA NA #> 463 TCGA-NC-A5HK-01 LUSC 15 NA NA 1 NA NA 1 -1 -1 1 -1 1 NA #> 464 TCGA-NC-A5HL-01 LUSC 16 -1 NA 0 NA -1 NA -1 -1 NA -1 NA 0 #> 465 TCGA-NC-A5HM-01 LUSC 15 NA 0 NA 0 -1 1 0 -1 NA -1 0 0 #> 466 TCGA-NC-A5HN-01 LUSC 14 NA 0 1 NA -1 1 -1 NA 1 -1 0 -1 #> 467 TCGA-NC-A5HO-01 LUSC 13 -1 0 0 NA -1 NA -1 NA 0 0 NA 0 #> 468 TCGA-NC-A5HP-01 LUSC 18 -1 1 NA 0 -1 1 -1 -1 0 -1 NA 0 #> 469 TCGA-NC-A5HQ-01 LUSC 22 -1 NA 1 0 -1 1 -1 -1 1 0 -1 -1 #> 470 TCGA-NC-A5HR-01 LUSC 17 -1 1 0 NA -1 1 -1 -1 -1 -1 0 -1 #> 471 TCGA-NC-A5HT-01 LUSC 12 0 0 0 0 0 NA 0 NA 1 -1 1 NA #> 472 TCGA-NK-A5CR-01 LUSC 15 NA 0 0 NA -1 NA NA -1 1 -1 NA 0 #> 473 TCGA-NK-A5CT-01 LUSC 18 0 0 0 0 NA NA -1 -1 1 -1 0 0 #> 474 TCGA-NK-A5CX-01 LUSC 22 0 0 -1 -1 -1 1 -1 -1 1 -1 0 0 #> 475 TCGA-NK-A7XE-01 LUSC 13 0 1 1 NA 0 1 0 0 1 0 NA 1 #> 476 TCGA-O2-A52N-01 LUSC 21 0 1 1 0 0 1 NA 1 NA 0 -1 0 #> 477 TCGA-O2-A52Q-01 LUSC 17 NA 0 0 0 -1 0 0 NA 0 0 0 NA #> 478 TCGA-O2-A52S-01 LUSC 14 -1 NA NA 0 -1 NA -1 -1 -1 -1 NA NA #> 479 TCGA-O2-A52V-01 LUSC 12 0 0 0 0 -1 1 -1 -1 0 0 -1 0 #> 480 TCGA-O2-A52W-01 LUSC 28 0 0 1 1 -1 1 -1 -1 1 -1 1 1 #> 481 TCGA-O2-A5IB-01 LUSC 9 NA NA 0 0 -1 1 NA 0 0 NA NA 1 #> 482 TCGA-XC-AA0X-01 LUSC 19 -1 1 NA NA -1 1 -1 -1 1 -1 -1 NA #> 483 TCGA-P7-A5NY-01 PCPG 2 -1 1 0 0 0 0 0 0 0 0 0 0 #> 484 TCGA-P7-A5NY-05 PCPG 19 -1 1 0 0 -1 -1 1 1 0 0 1 1 #> 485 TCGA-P8-A5KC-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 486 TCGA-P8-A5KD-01 PCPG 9 -1 0 0 0 0 -1 0 0 0 0 1 -1 #> 487 TCGA-P8-A6RX-01 PCPG 6 NA 0 0 0 -1 -1 0 0 0 NA 0 0 #> 488 TCGA-P8-A6RY-01 PCPG 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 489 TCGA-PR-A5PF-01 PCPG 8 -1 0 0 0 -1 0 0 0 0 0 0 0 #> 490 TCGA-PR-A5PG-01 PCPG 5 -1 0 0 0 0 0 0 0 0 0 1 NA #> 491 TCGA-PR-A5PH-01 PCPG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 492 TCGA-QR-A6GO-01 PCPG 6 -1 0 0 0 0 -1 0 0 0 0 1 -1 #> 493 TCGA-QR-A6GR-01 PCPG 2 NA 0 0 0 0 0 0 0 0 0 0 0 #> 494 TCGA-QR-A6GS-01 PCPG 2 NA 0 0 0 0 0 -1 0 0 0 0 0 #> 495 TCGA-QR-A6GT-01 PCPG 6 -1 1 0 -1 -1 -1 0 0 0 0 0 0 #> 496 TCGA-QR-A6GU-01 PCPG 5 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 497 TCGA-QR-A6GX-01 PCPG 20 -1 1 0 0 0 0 0 0 1 1 1 1 #> 498 TCGA-QR-A6GY-01 PCPG 5 0 0 -1 0 -1 0 0 0 0 0 0 0 #> 499 TCGA-QR-A6GZ-01 PCPG 23 0 0 1 1 -1 -1 1 0 0 0 1 1 #> 500 TCGA-QR-A6H0-01 PCPG 2 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 501 TCGA-QR-A6H1-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 502 TCGA-QR-A6H2-01 PCPG 1 NA 0 0 0 0 NA 0 0 0 0 0 0 #> 503 TCGA-QR-A6H3-01 PCPG 2 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 504 TCGA-QR-A6H5-01 PCPG 4 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 505 TCGA-QR-A6H6-01 PCPG 5 -1 0 0 -1 0 -1 0 0 0 0 0 0 #> 506 TCGA-QR-A700-01 PCPG 25 -1 -1 1 1 -1 -1 -1 -1 0 0 1 1 #> 507 TCGA-QR-A702-01 PCPG 3 NA 0 0 0 0 -1 0 0 0 0 0 0 #> 508 TCGA-QR-A706-01 PCPG 2 0 0 0 0 NA 0 -1 0 0 0 0 0 #> 509 TCGA-QR-A70C-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 510 TCGA-QR-A70D-01 PCPG 4 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 511 TCGA-QR-A70E-01 PCPG 3 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 512 TCGA-QR-A70G-01 PCPG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 513 TCGA-QR-A70H-01 PCPG 5 -1 0 0 0 0 0 0 0 -1 0 0 0 #> 514 TCGA-QR-A70I-01 PCPG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 515 TCGA-QR-A70J-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 516 TCGA-QR-A70K-01 PCPG 11 -1 1 0 -1 0 0 0 0 1 0 0 0 #> 517 TCGA-QR-A70N-01 PCPG 27 0 0 0 0 -1 -1 -1 -1 0 0 1 1 #> 518 TCGA-QR-A70P-01 PCPG 4 -1 1 0 0 NA 0 0 0 0 0 0 0 #> 519 TCGA-QR-A70W-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 NA #> 520 TCGA-QR-A70X-01 PCPG 3 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 521 TCGA-QR-A7IN-01 PCPG 9 -1 -1 0 0 -1 -1 0 0 -1 NA 0 0 #> 522 TCGA-QR-A7IP-01 PCPG 11 -1 0 1 -1 -1 -1 0 0 0 0 0 0 #> 523 TCGA-QT-A5XJ-01 PCPG 3 NA 0 0 0 -1 -1 0 0 0 NA 0 0 #> 524 TCGA-QT-A5XK-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 525 TCGA-QT-A5XL-01 PCPG 1 NA 0 0 0 -1 NA 0 0 0 NA 0 0 #> 526 TCGA-QT-A5XM-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 527 TCGA-QT-A5XN-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 528 TCGA-QT-A5XO-01 PCPG 2 NA 0 0 0 0 NA 0 NA 0 0 0 0 #> 529 TCGA-QT-A5XP-01 PCPG 4 NA 0 0 0 0 0 0 0 0 0 0 0 #> 530 TCGA-QT-A69Q-01 PCPG 18 -1 -1 -1 -1 0 0 -1 -1 -1 NA 0 0 #> 531 TCGA-QT-A7U0-01 PCPG 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 532 TCGA-RM-A68T-01 PCPG 4 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 533 TCGA-RM-A68W-01 PCPG 5 0 0 0 0 0 0 0 NA 0 0 1 0 #> 534 TCGA-RT-A6Y9-01 PCPG 2 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 535 TCGA-RT-A6YA-01 PCPG 13 -1 0 0 0 -1 -1 -1 -1 0 0 0 0 #> 536 TCGA-RT-A6YC-01 PCPG 3 -1 0 0 0 0 0 0 0 0 0 0 0 #> 537 TCGA-RW-A67V-01 PCPG 1 -1 0 0 0 NA 0 0 0 0 NA 0 0 #> 538 TCGA-RW-A67W-01 PCPG 2 -1 0 0 0 0 NA 0 NA 0 0 0 0 #> 539 TCGA-RW-A67X-01 PCPG 9 0 0 0 0 -1 -1 -1 -1 0 0 0 0 #> 540 TCGA-RW-A67Y-01 PCPG 5 NA 0 0 0 -1 -1 0 0 0 NA 0 0 #> 541 TCGA-RW-A680-01 PCPG 4 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 542 TCGA-RW-A681-01 PCPG 21 NA NA 0 0 0 0 0 0 0 0 0 0 #> 543 TCGA-RW-A684-01 PCPG 3 -1 0 0 0 0 0 0 0 0 0 1 0 #> 544 TCGA-RW-A685-01 PCPG 4 -1 0 0 0 1 -1 0 0 0 0 0 0 #> 545 TCGA-RW-A686-01 PCPG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 546 TCGA-RW-A686-06 PCPG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 547 TCGA-RW-A688-01 PCPG 4 -1 0 0 0 1 -1 0 1 0 0 0 0 #> 548 TCGA-RW-A689-01 PCPG 5 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 549 TCGA-RW-A68A-01 PCPG 8 -1 0 NA 0 -1 -1 0 0 0 0 0 0 #> 550 TCGA-RW-A68B-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 551 TCGA-RW-A68C-01 PCPG 5 0 0 0 0 -1 -1 NA -1 0 0 0 0 #> 552 TCGA-RW-A68D-01 PCPG 3 0 0 1 0 0 0 1 0 0 0 0 0 #> 553 TCGA-RW-A68F-01 PCPG 5 0 0 1 0 0 0 0 0 0 0 0 0 #> 554 TCGA-RW-A68G-01 PCPG 3 0 0 -1 0 0 0 0 0 0 0 0 0 #> 555 TCGA-RW-A7CZ-01 PCPG 4 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 556 TCGA-RW-A7D0-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 557 TCGA-RW-A8AZ-01 PCPG 4 -1 NA 0 0 0 0 0 0 0 0 0 0 #> 558 TCGA-RX-A8JQ-01 PCPG 3 -1 1 0 0 0 0 0 0 0 0 0 0 #> 559 TCGA-S7-A7WL-01 PCPG 8 NA 1 0 0 -1 -1 0 0 1 0 0 0 #> 560 TCGA-S7-A7WM-01 PCPG 4 -1 0 0 0 -1 0 0 0 0 0 0 NA #> 561 TCGA-S7-A7WN-01 PCPG 4 -1 0 0 0 0 0 0 0 0 0 1 -1 #> 562 TCGA-S7-A7WO-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 563 TCGA-S7-A7WP-01 PCPG 6 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 564 TCGA-S7-A7WQ-01 PCPG 10 -1 -1 0 0 -1 -1 0 0 0 0 0 0 #> 565 TCGA-S7-A7WR-01 PCPG 8 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 566 TCGA-S7-A7WT-01 PCPG 3 -1 0 0 0 -1 0 0 0 0 0 0 0 #> 567 TCGA-S7-A7WU-01 PCPG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 568 TCGA-S7-A7WV-01 PCPG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 569 TCGA-S7-A7WW-01 PCPG 10 0 0 0 0 0 0 0 0 0 0 0 0 #> 570 TCGA-S7-A7WX-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 571 TCGA-S7-A7X0-01 PCPG 6 -1 0 0 -1 -1 -1 0 0 0 0 0 0 #> 572 TCGA-S7-A7X1-01 PCPG 6 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 573 TCGA-S7-A7X2-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 574 TCGA-SA-A6C2-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 575 TCGA-SP-A6QC-01 PCPG 5 -1 1 0 -1 0 0 0 0 0 0 0 0 #> 576 TCGA-SP-A6QD-01 PCPG 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 577 TCGA-SP-A6QF-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 578 TCGA-SP-A6QG-01 PCPG 5 -1 0 0 -1 -1 -1 0 0 0 0 0 0 #> 579 TCGA-SP-A6QI-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 580 TCGA-SP-A6QJ-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 581 TCGA-SP-A6QK-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 582 TCGA-SQ-A6I4-01 PCPG 2 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 583 TCGA-SQ-A6I6-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 584 TCGA-SR-A6MP-01 PCPG 6 NA 0 0 0 0 -1 0 0 0 0 0 0 #> 585 TCGA-SR-A6MQ-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 NA 0 0 #> 586 TCGA-SR-A6MS-01 PCPG 6 -1 0 0 0 0 0 0 0 0 0 0 0 #> 587 TCGA-SR-A6MT-01 PCPG 24 -1 -1 -1 -1 -1 -1 -1 -1 0 0 -1 -1 #> 588 TCGA-SR-A6MU-01 PCPG 4 -1 0 0 0 0 0 0 0 0 0 0 0 #> 589 TCGA-SR-A6MV-01 PCPG 10 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 590 TCGA-SR-A6MX-01 PCPG 5 -1 0 0 -1 NA -1 0 0 0 0 NA NA #> 591 TCGA-SR-A6MX-05 PCPG 6 -1 0 0 -1 NA -1 0 0 0 0 NA 0 #> 592 TCGA-SR-A6MX-06 PCPG 8 -1 0 0 -1 NA -1 0 0 0 0 NA NA #> 593 TCGA-SR-A6MY-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 NA 0 -1 #> 594 TCGA-SR-A6MZ-01 PCPG 7 -1 1 0 0 0 NA 0 0 0 1 0 0 #> 595 TCGA-SR-A6N0-01 PCPG 11 0 0 0 0 0 0 0 0 1 1 0 0 #> 596 TCGA-TT-A6YJ-01 PCPG 4 -1 NA 0 0 0 -1 0 0 0 0 0 -1 #> 597 TCGA-TT-A6YK-01 PCPG 7 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 598 TCGA-TT-A6YN-01 PCPG 5 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 599 TCGA-TT-A6YO-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 600 TCGA-TT-A6YP-01 PCPG 6 0 0 0 0 -1 -1 -1 -1 0 0 0 0 #> 601 TCGA-W2-A7H5-01 PCPG 25 -1 0 0 0 -1 -1 0 0 1 1 1 1 #> 602 TCGA-W2-A7H7-01 PCPG 7 NA 0 0 0 -1 -1 0 0 -1 0 0 0 #> 603 TCGA-W2-A7HA-01 PCPG 5 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 604 TCGA-W2-A7HB-01 PCPG 6 -1 0 -1 -1 0 -1 0 0 0 0 0 0 #> 605 TCGA-W2-A7HC-01 PCPG 6 -1 0 0 0 0 -1 0 0 0 0 0 -1 #> 606 TCGA-W2-A7HD-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 607 TCGA-W2-A7HE-01 PCPG 6 -1 0 0 0 0 0 0 0 0 0 0 0 #> 608 TCGA-W2-A7HF-01 PCPG 6 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 609 TCGA-W2-A7HH-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 610 TCGA-W2-A7UY-01 PCPG 11 -1 0 0 0 -1 -1 0 0 -1 0 0 -1 #> 611 TCGA-WB-A80K-01 PCPG 5 NA 0 0 0 0 0 1 1 1 1 0 0 #> 612 TCGA-WB-A80L-01 PCPG 15 0 0 0 0 0 0 0 0 0 0 1 1 #> 613 TCGA-WB-A80M-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 NA 0 0 #> 614 TCGA-WB-A80N-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 615 TCGA-WB-A80O-01 PCPG 5 -1 0 0 0 0 0 0 0 0 0 0 -1 #> 616 TCGA-WB-A80P-01 PCPG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 617 TCGA-WB-A80Q-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 618 TCGA-WB-A80V-01 PCPG 8 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 619 TCGA-WB-A80Y-01 PCPG 2 0 0 0 0 NA 0 0 NA 0 0 0 0 #> 620 TCGA-WB-A814-01 PCPG 3 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 621 TCGA-WB-A815-01 PCPG 10 0 1 -1 0 -1 0 0 0 1 0 0 0 #> 622 TCGA-WB-A816-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 623 TCGA-WB-A817-01 PCPG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 624 TCGA-WB-A818-01 PCPG 3 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 625 TCGA-WB-A819-01 PCPG 4 -1 0 0 0 -1 -1 0 0 0 0 0 -1 #> 626 TCGA-WB-A81A-01 PCPG 10 0 0 0 0 0 0 0 0 1 0 0 0 #> 627 TCGA-WB-A81D-01 PCPG 1 NA 0 1 0 0 0 0 0 0 0 0 0 #> 628 TCGA-WB-A81E-01 PCPG 3 -1 -1 0 0 -1 0 0 0 0 0 0 0 #> 629 TCGA-WB-A81F-01 PCPG 2 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 630 TCGA-WB-A81G-01 PCPG 3 -1 1 0 0 0 -1 0 0 0 0 0 0 #> 631 TCGA-WB-A81H-01 PCPG 4 -1 0 0 0 0 0 0 0 0 0 0 0 #> 632 TCGA-WB-A81I-01 PCPG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 633 TCGA-WB-A81J-01 PCPG 4 0 0 0 0 0 0 -1 1 0 0 0 0 #> 634 TCGA-WB-A81K-01 PCPG 2 NA 0 0 0 NA NA 0 0 0 NA 0 0 #> 635 TCGA-WB-A81M-01 PCPG 2 NA 0 0 0 0 0 0 0 0 0 0 0 #> 636 TCGA-WB-A81N-01 PCPG 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 637 TCGA-WB-A81P-01 PCPG 2 NA 0 0 0 0 0 0 0 0 0 0 0 #> 638 TCGA-WB-A81Q-01 PCPG 7 -1 1 0 0 0 NA 0 0 0 0 0 0 #> 639 TCGA-WB-A81R-01 PCPG 5 -1 0 0 0 0 NA 0 0 0 0 0 -1 #> 640 TCGA-WB-A81S-01 PCPG 12 -1 0 0 0 0 NA 0 0 0 NA -1 -1 #> 641 TCGA-WB-A81T-01 PCPG 6 -1 0 0 0 0 -1 0 NA 1 0 0 NA #> 642 TCGA-WB-A81V-01 PCPG 4 -1 NA 0 0 0 0 0 0 0 0 0 0 #> 643 TCGA-WB-A81W-01 PCPG 7 -1 0 0 0 -1 -1 0 0 0 0 0 0 #> 644 TCGA-WB-A821-01 PCPG 25 -1 -1 -1 -1 -1 -1 -1 -1 1 1 1 1 #> 645 TCGA-WB-A822-01 PCPG 4 -1 0 0 0 0 -1 0 0 0 0 0 0 #> 646 TCGA-XG-A823-01 PCPG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 647 TCGA-4C-A93U-01 THCA 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 648 TCGA-BJ-A0YZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 649 TCGA-BJ-A0Z0-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 650 TCGA-BJ-A0Z2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 651 TCGA-BJ-A0Z3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 652 TCGA-BJ-A0Z9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 653 TCGA-BJ-A0ZA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 654 TCGA-BJ-A0ZB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 655 TCGA-BJ-A0ZC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 656 TCGA-BJ-A0ZE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 657 TCGA-BJ-A0ZG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 658 TCGA-BJ-A0ZH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 659 TCGA-BJ-A0ZJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 660 TCGA-BJ-A18Y-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 661 TCGA-BJ-A18Z-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 662 TCGA-BJ-A191-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 663 TCGA-BJ-A28R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 664 TCGA-BJ-A28S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 665 TCGA-BJ-A28T-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 666 TCGA-BJ-A28V-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 667 TCGA-BJ-A28X-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 668 TCGA-BJ-A290-01 THCA 2 0 1 0 1 0 0 0 0 0 0 0 0 #> 669 TCGA-BJ-A291-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 670 TCGA-BJ-A2N7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 671 TCGA-BJ-A2N8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 672 TCGA-BJ-A2N9-01 THCA 8 0 0 0 0 0 0 0 0 1 1 0 0 #> 673 TCGA-BJ-A2NA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 674 TCGA-BJ-A2P4-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 675 TCGA-BJ-A3EZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 676 TCGA-BJ-A3F0-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 677 TCGA-BJ-A3PR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 678 TCGA-BJ-A3PT-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 679 TCGA-BJ-A3PU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 680 TCGA-BJ-A45D-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 681 TCGA-BJ-A45E-01 THCA 7 0 0 0 0 0 0 0 0 0 0 0 0 #> 682 TCGA-BJ-A45F-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 683 TCGA-BJ-A45G-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 684 TCGA-BJ-A45H-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 685 TCGA-BJ-A45I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 686 TCGA-BJ-A45K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 687 TCGA-BJ-A4O8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 688 TCGA-BJ-A4O9-01 THCA 0 0 0 0 0 0 0 0 0 NA 0 0 0 #> 689 TCGA-CE-A13K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 690 TCGA-CE-A27D-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 691 TCGA-CE-A3MD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 692 TCGA-CE-A3ME-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 693 TCGA-CE-A482-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 694 TCGA-CE-A483-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 695 TCGA-CE-A484-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 696 TCGA-CE-A485-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 697 TCGA-DE-A0XZ-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 698 TCGA-DE-A0Y2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 699 TCGA-DE-A0Y3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 700 TCGA-DE-A2OL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 701 TCGA-DE-A3KN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 702 TCGA-DE-A4M8-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 703 TCGA-DE-A4M9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 704 TCGA-DE-A4MA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 705 TCGA-DE-A4MB-01 THCA 3 0 1 0 0 0 0 0 0 1 0 0 0 #> 706 TCGA-DE-A4MC-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 707 TCGA-DE-A4MD-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 708 TCGA-DE-A4MD-06 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 709 TCGA-DE-A69J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 710 TCGA-DE-A69K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 711 TCGA-DE-A7U5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 712 TCGA-DJ-A13L-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 713 TCGA-DJ-A13M-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 714 TCGA-DJ-A13O-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 715 TCGA-DJ-A13P-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 716 TCGA-DJ-A13R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 717 TCGA-DJ-A13S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 718 TCGA-DJ-A13T-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 719 TCGA-DJ-A13U-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 720 TCGA-DJ-A13V-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 721 TCGA-DJ-A13W-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 722 TCGA-DJ-A13X-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 723 TCGA-DJ-A1QD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 724 TCGA-DJ-A1QE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 725 TCGA-DJ-A1QF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 726 TCGA-DJ-A1QG-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 727 TCGA-DJ-A1QH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 728 TCGA-DJ-A1QI-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 729 TCGA-DJ-A1QL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 730 TCGA-DJ-A1QM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 731 TCGA-DJ-A1QN-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 732 TCGA-DJ-A1QO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 733 TCGA-DJ-A1QQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 734 TCGA-DJ-A2PN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 735 TCGA-DJ-A2PO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 736 TCGA-DJ-A2PP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 737 TCGA-DJ-A2PQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 738 TCGA-DJ-A2PR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 739 TCGA-DJ-A2PS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 740 TCGA-DJ-A2PT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 741 TCGA-DJ-A2PU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 742 TCGA-DJ-A2PV-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 743 TCGA-DJ-A2PW-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 744 TCGA-DJ-A2PX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 745 TCGA-DJ-A2PY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 746 TCGA-DJ-A2PZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 747 TCGA-DJ-A2Q0-01 THCA 18 0 0 -1 -1 0 0 0 0 0 0 1 1 #> 748 TCGA-DJ-A2Q1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 749 TCGA-DJ-A2Q2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 750 TCGA-DJ-A2Q3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 751 TCGA-DJ-A2Q4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 752 TCGA-DJ-A2Q5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 753 TCGA-DJ-A2Q6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 754 TCGA-DJ-A2Q7-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 755 TCGA-DJ-A2Q8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 756 TCGA-DJ-A2QA-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 757 TCGA-DJ-A2QB-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 758 TCGA-DJ-A2QC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 759 TCGA-DJ-A3UK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 760 TCGA-DJ-A3UM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 761 TCGA-DJ-A3UN-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 762 TCGA-DJ-A3UO-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 763 TCGA-DJ-A3UP-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 764 TCGA-DJ-A3UQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 765 TCGA-DJ-A3UR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 766 TCGA-DJ-A3UT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 767 TCGA-DJ-A3UU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 768 TCGA-DJ-A3UW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 769 TCGA-DJ-A3UY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 770 TCGA-DJ-A3V0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 771 TCGA-DJ-A3V2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 772 TCGA-DJ-A3V3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 773 TCGA-DJ-A3V4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 774 TCGA-DJ-A3V5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 775 TCGA-DJ-A3V8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 776 TCGA-DJ-A3V9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 777 TCGA-DJ-A3VB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 778 TCGA-DJ-A3VD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 779 TCGA-DJ-A3VE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 780 TCGA-DJ-A3VF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 781 TCGA-DJ-A3VG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 782 TCGA-DJ-A3VI-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 783 TCGA-DJ-A3VJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 784 TCGA-DJ-A3VK-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 785 TCGA-DJ-A3VL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 786 TCGA-DJ-A3VM-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 787 TCGA-DJ-A4UL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 788 TCGA-DJ-A4UP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 789 TCGA-DJ-A4UQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 790 TCGA-DJ-A4UR-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 791 TCGA-DJ-A4UT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 792 TCGA-DJ-A4UW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 793 TCGA-DJ-A4V0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 794 TCGA-DJ-A4V2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 795 TCGA-DJ-A4V4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 796 TCGA-DJ-A4V5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 797 TCGA-DO-A1JZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 798 TCGA-DO-A1K0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 799 TCGA-DO-A2HM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 800 TCGA-E3-A3DY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 801 TCGA-E3-A3DZ-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 802 TCGA-E3-A3E0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 803 TCGA-E3-A3E1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 804 TCGA-E3-A3E2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 805 TCGA-E3-A3E3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 806 TCGA-E3-A3E5-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 807 TCGA-E8-A242-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 808 TCGA-E8-A3X7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 809 TCGA-E8-A413-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 810 TCGA-E8-A414-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 811 TCGA-E8-A417-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 812 TCGA-E8-A418-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 813 TCGA-E8-A419-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 814 TCGA-E8-A432-01 THCA 9 -1 0 0 0 0 0 0 0 0 0 0 0 #> 815 TCGA-E8-A434-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 816 TCGA-E8-A437-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 817 TCGA-E8-A438-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 818 TCGA-E8-A44K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 819 TCGA-EL-A3CL-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 820 TCGA-EL-A3CM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 821 TCGA-EL-A3CN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 822 TCGA-EL-A3CO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 823 TCGA-EL-A3CP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 824 TCGA-EL-A3CR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 825 TCGA-EL-A3CS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 826 TCGA-EL-A3CT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 827 TCGA-EL-A3CU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 828 TCGA-EL-A3CV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 829 TCGA-EL-A3CX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 830 TCGA-EL-A3CZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 831 TCGA-EL-A3D1-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 832 TCGA-EL-A3D4-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 833 TCGA-EL-A3D6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 834 TCGA-EL-A3GO-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 835 TCGA-EL-A3GP-01 THCA 8 0 1 0 0 0 0 0 0 0 0 0 0 #> 836 TCGA-EL-A3GQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 837 TCGA-EL-A3GR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 838 TCGA-EL-A3GS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 839 TCGA-EL-A3GU-01 THCA 2 0 1 0 0 0 0 0 0 1 0 0 0 #> 840 TCGA-EL-A3GV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 841 TCGA-EL-A3GW-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 842 TCGA-EL-A3GY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 843 TCGA-EL-A3H1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 844 TCGA-EL-A3H2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 -1 #> 845 TCGA-EL-A3H3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 846 TCGA-EL-A3H4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 847 TCGA-EL-A3H5-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 848 TCGA-EL-A3H7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 849 TCGA-EL-A3H8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 850 TCGA-EL-A3MW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 851 TCGA-EL-A3MX-01 THCA 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 852 TCGA-EL-A3MY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 853 TCGA-EL-A3MZ-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 854 TCGA-EL-A3N2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 855 TCGA-EL-A3N3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 856 TCGA-EL-A3T1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 857 TCGA-EL-A3T2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 858 TCGA-EL-A3T3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 859 TCGA-EL-A3T6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 860 TCGA-EL-A3T7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 861 TCGA-EL-A3T8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 862 TCGA-EL-A3T9-01 THCA 11 0 1 0 0 0 0 0 0 1 1 0 0 #> 863 TCGA-EL-A3TA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 864 TCGA-EL-A3TB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 865 TCGA-EL-A3ZG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 866 TCGA-EL-A3ZH-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 867 TCGA-EL-A3ZK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 868 TCGA-EL-A3ZL-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 869 TCGA-EL-A3ZM-01 THCA 6 0 0 0 0 0 0 0 0 1 1 0 0 #> 870 TCGA-EL-A3ZN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 871 TCGA-EL-A3ZO-01 THCA 4 0 1 0 0 0 0 0 0 1 0 0 0 #> 872 TCGA-EL-A3ZP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 873 TCGA-EL-A3ZQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 874 TCGA-EL-A3ZR-01 THCA 8 0 0 0 0 0 0 0 0 0 0 0 0 #> 875 TCGA-EL-A3ZS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 876 TCGA-EL-A3ZT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 877 TCGA-EL-A4JV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 878 TCGA-EL-A4JW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 879 TCGA-EL-A4JX-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 880 TCGA-EL-A4JZ-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 881 TCGA-EL-A4K0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 882 TCGA-EL-A4K1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 883 TCGA-EL-A4K2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 884 TCGA-EL-A4K4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 885 TCGA-EL-A4K6-01 THCA 5 0 0 0 0 0 0 0 0 0 0 0 0 #> 886 TCGA-EL-A4K7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 887 TCGA-EL-A4K9-01 THCA 2 0 0 0 0 0 0 0 0 0 1 0 0 #> 888 TCGA-EL-A4KD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 889 TCGA-EL-A4KG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 890 TCGA-EL-A4KH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 891 TCGA-EL-A4KI-01 THCA 19 0 0 0 0 0 0 0 0 1 1 0 0 #> 892 TCGA-EM-A1CS-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 893 TCGA-EM-A1CT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 894 TCGA-EM-A1CU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 895 TCGA-EM-A1CV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 896 TCGA-EM-A1CW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 897 TCGA-EM-A1YA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 898 TCGA-EM-A1YB-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 899 TCGA-EM-A1YE-01 THCA 12 -1 -1 -1 -1 0 -1 0 0 0 0 0 -1 #> 900 TCGA-EM-A22I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 901 TCGA-EM-A22J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 902 TCGA-EM-A22K-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 903 TCGA-EM-A22L-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 904 TCGA-EM-A22M-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 905 TCGA-EM-A22N-01 THCA 23 0 0 -1 -1 NA 1 1 1 1 1 0 0 #> 906 TCGA-EM-A22O-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 907 TCGA-EM-A22P-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 908 TCGA-EM-A22Q-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 909 TCGA-EM-A2CJ-01 THCA 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 910 TCGA-EM-A2CK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 911 TCGA-EM-A2CL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 912 TCGA-EM-A2CM-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 913 TCGA-EM-A2CN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 914 TCGA-EM-A2CO-01 THCA 6 0 0 -1 -1 NA 0 0 0 0 0 0 0 #> 915 TCGA-EM-A2CP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 916 TCGA-EM-A2CQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 917 TCGA-EM-A2CT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 918 TCGA-EM-A2OV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 919 TCGA-EM-A2OW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 920 TCGA-EM-A2OX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 921 TCGA-EM-A2OY-01 THCA 21 0 0 -1 -1 0 0 0 0 1 1 0 0 #> 922 TCGA-EM-A2OZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 923 TCGA-EM-A2P0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 924 TCGA-EM-A2P1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 925 TCGA-EM-A2P1-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 926 TCGA-EM-A2P2-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 927 TCGA-EM-A2P3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 928 TCGA-EM-A3AI-01 THCA 13 0 0 0 0 0 0 0 0 1 1 0 0 #> 929 TCGA-EM-A3AJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 930 TCGA-EM-A3AK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 931 TCGA-EM-A3AL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 932 TCGA-EM-A3AN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 933 TCGA-EM-A3AO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 934 TCGA-EM-A3AP-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 935 TCGA-EM-A3AR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 936 TCGA-EM-A3FJ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 937 TCGA-EM-A3FK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 938 TCGA-EM-A3FL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 939 TCGA-EM-A3FM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 940 TCGA-EM-A3FN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 941 TCGA-EM-A3FO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 942 TCGA-EM-A3FP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 943 TCGA-EM-A3FQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 944 TCGA-EM-A3FQ-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 945 TCGA-EM-A3FR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 946 TCGA-EM-A3O3-01 THCA 4 0 1 0 0 0 0 0 0 1 0 0 0 #> 947 TCGA-EM-A3O6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 948 TCGA-EM-A3O7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 949 TCGA-EM-A3O8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 950 TCGA-EM-A3O9-01 THCA 20 0 0 -1 -1 0 0 0 0 0 0 0 0 #> 951 TCGA-EM-A3OA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 952 TCGA-EM-A3OB-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 953 TCGA-EM-A3ST-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 954 TCGA-EM-A3SU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 955 TCGA-EM-A3SU-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 956 TCGA-EM-A3SX-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 957 TCGA-EM-A3SY-01 THCA 26 0 0 -1 -1 0 0 0 0 1 1 0 0 #> 958 TCGA-EM-A3SZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 959 TCGA-EM-A4FF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 960 TCGA-EM-A4FH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 961 TCGA-EM-A4FK-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 962 TCGA-EM-A4FM-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 963 TCGA-EM-A4FN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 964 TCGA-EM-A4FO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 965 TCGA-EM-A4FQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 966 TCGA-EM-A4FR-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 967 TCGA-EM-A4FU-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 968 TCGA-EM-A4FV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 969 TCGA-EM-A4G1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 970 TCGA-ET-A25G-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 971 TCGA-ET-A25I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 972 TCGA-ET-A25J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 973 TCGA-ET-A25K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 974 TCGA-ET-A25L-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 975 TCGA-ET-A25O-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 976 TCGA-ET-A25P-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 977 TCGA-ET-A25R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 978 TCGA-ET-A2MX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 979 TCGA-ET-A2MY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 980 TCGA-ET-A2MZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 981 TCGA-ET-A2N0-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 982 TCGA-ET-A2N1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 983 TCGA-ET-A2N3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 984 TCGA-ET-A2N4-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 985 TCGA-ET-A2N5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 986 TCGA-ET-A39I-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 987 TCGA-ET-A39J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 988 TCGA-ET-A39K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 989 TCGA-ET-A39L-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 990 TCGA-ET-A39M-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 991 TCGA-ET-A39N-01 THCA 21 -1 -1 0 -1 -1 -1 -1 -1 0 0 -1 -1 #> 992 TCGA-ET-A39O-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 993 TCGA-ET-A39P-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 994 TCGA-ET-A39R-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 995 TCGA-ET-A39S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 996 TCGA-ET-A39T-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 997 TCGA-ET-A3BN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 998 TCGA-ET-A3BO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 999 TCGA-ET-A3BP-01 THCA 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 1000 TCGA-ET-A3BQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1001 TCGA-ET-A3BS-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1002 TCGA-ET-A3BT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1003 TCGA-ET-A3BU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1004 TCGA-ET-A3BV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1005 TCGA-ET-A3BW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1006 TCGA-ET-A3BX-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1007 TCGA-ET-A3DO-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1008 TCGA-ET-A3DP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1009 TCGA-ET-A3DQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1010 TCGA-ET-A3DR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1011 TCGA-ET-A3DS-01 THCA 5 0 0 -1 0 0 0 0 0 0 0 0 0 #> 1012 TCGA-ET-A3DT-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1013 TCGA-ET-A3DU-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1014 TCGA-ET-A3DV-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1015 TCGA-ET-A3DW-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1016 TCGA-ET-A40P-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1017 TCGA-ET-A40Q-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1018 TCGA-ET-A40S-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1019 TCGA-ET-A40T-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1020 TCGA-ET-A4KN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1021 TCGA-ET-A4KQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1022 TCGA-FE-A22Z-01 THCA 1 0 0 0 0 0 0 0 NA 0 NA 0 0 #> 1023 TCGA-FE-A230-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1024 TCGA-FE-A231-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1025 TCGA-FE-A232-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1026 TCGA-FE-A233-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1027 TCGA-FE-A234-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1028 TCGA-FE-A235-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1029 TCGA-FE-A236-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1030 TCGA-FE-A237-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1031 TCGA-FE-A23A-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1032 TCGA-FE-A3PA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1033 TCGA-FE-A3PB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1034 TCGA-FE-A3PC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1035 TCGA-FE-A3PD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1036 TCGA-FK-A3S3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1037 TCGA-FK-A3SB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1038 TCGA-FK-A3SD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1039 TCGA-FK-A3SE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1040 TCGA-FK-A3SG-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1041 TCGA-FK-A3SH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1042 TCGA-FK-A4UB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1043 TCGA-FY-A2QD-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1044 TCGA-FY-A3BL-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1045 TCGA-FY-A3I4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1046 TCGA-FY-A3I5-01 THCA 17 -1 -1 -1 -1 -1 -1 0 0 0 0 -1 -1 #> 1047 TCGA-FY-A3NM-01 THCA 13 1 1 0 0 0 0 1 1 1 1 0 0 #> 1048 TCGA-FY-A3NN-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1049 TCGA-FY-A3ON-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1050 TCGA-FY-A3R6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1051 TCGA-FY-A3R7-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1052 TCGA-FY-A3R8-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1053 TCGA-FY-A3R9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1054 TCGA-FY-A3RA-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1055 TCGA-FY-A3TY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1056 TCGA-FY-A3W9-01 THCA 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1057 TCGA-FY-A3WA-01 THCA 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 1058 TCGA-FY-A3YR-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1059 TCGA-FY-A40K-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1060 TCGA-FY-A40L-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1061 TCGA-FY-A40M-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1062 TCGA-FY-A40N-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1063 TCGA-FY-A4B0-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1064 TCGA-FY-A4B3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1065 TCGA-FY-A4B4-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1066 TCGA-FY-A76V-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1067 TCGA-GE-A2C6-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1068 TCGA-H2-A26U-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1069 TCGA-H2-A2K9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1070 TCGA-H2-A3RH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1071 TCGA-H2-A3RI-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1072 TCGA-H2-A421-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1073 TCGA-H2-A422-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1074 TCGA-IM-A3EB-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1075 TCGA-IM-A3ED-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1076 TCGA-IM-A3U2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1077 TCGA-IM-A3U3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1078 TCGA-IM-A41Y-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1079 TCGA-IM-A41Z-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1080 TCGA-IM-A420-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1081 TCGA-IM-A4EB-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1082 TCGA-J8-A3NZ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1083 TCGA-J8-A3O0-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1084 TCGA-J8-A3O1-01 THCA 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1085 TCGA-J8-A3O2-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1086 TCGA-J8-A3O2-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1087 TCGA-J8-A3YD-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1088 TCGA-J8-A3YE-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1089 TCGA-J8-A3YF-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1090 TCGA-J8-A3YG-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1091 TCGA-J8-A3YH-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1092 TCGA-J8-A3YH-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1093 TCGA-J8-A42S-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1094 TCGA-J8-A4HW-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1095 TCGA-J8-A4HW-06 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1096 TCGA-J8-A4HY-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1097 TCGA-KS-A41F-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1098 TCGA-KS-A41I-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1099 TCGA-KS-A41J-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1100 TCGA-KS-A41L-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1101 TCGA-KS-A4I1-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1102 TCGA-KS-A4I3-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1103 TCGA-KS-A4I5-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1104 TCGA-KS-A4I7-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1105 TCGA-KS-A4I9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1106 TCGA-KS-A4IB-01 THCA 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1107 TCGA-KS-A4IC-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1108 TCGA-KS-A4ID-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1109 TCGA-L6-A4EP-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1110 TCGA-L6-A4EQ-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1111 TCGA-L6-A4ET-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1112 TCGA-L6-A4EU-01 THCA 1 0 1 0 0 0 0 0 0 NA 0 0 0 #> 1113 TCGA-MK-A4N6-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1114 TCGA-MK-A4N7-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1115 TCGA-MK-A4N9-01 THCA 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1116 TCGA-MK-A84Z-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1117 TCGA-QD-A8IV-01 THCA 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1118 TCGA-FA-8693-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1119 TCGA-FA-A4BB-01 DLBC 1 0 NA 0 0 0 0 0 0 0 0 NA 0 #> 1120 TCGA-FA-A4XK-01 DLBC 7 0 0 0 0 0 0 0 0 NA 0 0 NA #> 1121 TCGA-FA-A6HN-01 DLBC 0 0 NA 0 0 0 0 0 0 0 0 NA 0 #> 1122 TCGA-FA-A6HO-01 DLBC 24 -1 0 NA -1 1 1 -1 NA NA 0 1 NA #> 1123 TCGA-FA-A7DS-01 DLBC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1124 TCGA-FA-A7Q1-01 DLBC 9 0 1 0 0 NA 0 0 0 1 1 0 0 #> 1125 TCGA-FA-A82F-01 DLBC 23 -1 -1 NA -1 0 0 -1 -1 -1 -1 1 -1 #> 1126 TCGA-FA-A86F-01 DLBC 2 0 NA 0 0 0 0 0 0 1 0 0 0 #> 1127 TCGA-FF-8041-01 DLBC 15 0 0 1 NA 0 0 0 0 1 1 0 0 #> 1128 TCGA-FF-8042-01 DLBC 7 0 0 0 0 1 1 0 0 0 NA 1 NA #> 1129 TCGA-FF-8043-01 DLBC 9 0 NA NA NA 0 0 0 -1 0 0 0 0 #> 1130 TCGA-FF-8046-01 DLBC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1131 TCGA-FF-8047-01 DLBC 5 0 NA 0 0 0 1 0 -1 0 0 0 0 #> 1132 TCGA-FF-8061-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1133 TCGA-FF-8062-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1134 TCGA-FF-A7CQ-01 DLBC 4 0 0 0 0 NA NA 0 0 0 0 NA 0 #> 1135 TCGA-FF-A7CR-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 NA #> 1136 TCGA-FF-A7CW-01 DLBC 8 0 NA 0 0 1 1 0 0 0 0 0 NA #> 1137 TCGA-FF-A7CX-01 DLBC 2 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1138 TCGA-FM-8000-01 DLBC 4 0 1 0 0 0 0 0 0 0 0 0 0 #> 1139 TCGA-G8-6325-01 DLBC 3 -1 NA 0 0 NA NA 0 0 0 0 1 NA #> 1140 TCGA-G8-6326-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1141 TCGA-G8-6906-01 DLBC 1 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1142 TCGA-G8-6907-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1143 TCGA-G8-6909-01 DLBC 3 0 0 NA 0 0 0 0 0 NA NA NA NA #> 1144 TCGA-G8-6914-01 DLBC 5 0 NA 0 0 1 1 0 0 0 0 0 0 #> 1145 TCGA-GR-7351-01 DLBC 1 0 0 NA NA 0 0 0 0 0 0 0 0 #> 1146 TCGA-GR-7353-01 DLBC 10 -1 1 0 0 0 0 0 -1 0 0 0 0 #> 1147 TCGA-GR-A4D4-01 DLBC 9 0 0 0 0 0 NA 0 0 0 0 0 0 #> 1148 TCGA-GR-A4D5-01 DLBC 5 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1149 TCGA-GR-A4D6-01 DLBC 8 0 NA 0 0 1 1 0 NA 0 0 0 0 #> 1150 TCGA-GR-A4D9-01 DLBC 3 0 1 0 0 0 0 0 0 0 0 0 NA #> 1151 TCGA-GS-A9TQ-01 DLBC 20 -1 1 0 NA -1 -1 -1 -1 0 0 1 -1 #> 1152 TCGA-GS-A9TT-01 DLBC 4 0 0 0 0 0 0 0 0 0 0 0 NA #> 1153 TCGA-GS-A9TU-01 DLBC 5 0 0 0 0 NA 1 0 0 0 NA 0 0 #> 1154 TCGA-GS-A9TV-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1155 TCGA-GS-A9TW-01 DLBC 16 0 0 0 0 NA 1 0 0 1 1 1 NA #> 1156 TCGA-GS-A9TX-01 DLBC 6 0 0 1 NA 1 1 0 0 0 NA 0 0 #> 1157 TCGA-GS-A9TY-01 DLBC 13 0 NA 1 NA 0 NA 0 NA 1 1 NA -1 #> 1158 TCGA-GS-A9TZ-01 DLBC 15 0 0 1 NA -1 -1 0 0 1 1 0 0 #> 1159 TCGA-GS-A9U3-01 DLBC 6 0 NA 0 0 1 1 0 0 1 0 0 0 #> 1160 TCGA-GS-A9U4-01 DLBC 11 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1161 TCGA-RQ-A68N-01 DLBC 16 -1 -1 0 -1 1 1 0 0 0 0 0 -1 #> 1162 TCGA-RQ-A6JB-01 DLBC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1163 TCGA-RQ-AAAT-01 DLBC 13 0 -1 NA NA -1 -1 0 0 -1 -1 0 -1 #> 1164 TCGA-VB-A8QN-01 DLBC 1 0 1 0 0 0 0 0 0 0 0 0 NA #> 1165 TCGA-3G-AB0O-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1166 TCGA-3G-AB0Q-01 THYM 0 0 0 0 NA 0 0 0 0 0 0 0 0 #> 1167 TCGA-3G-AB0T-01 THYM 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1168 TCGA-3G-AB14-01 THYM 3 0 0 0 0 -1 NA 0 0 0 0 -1 -1 #> 1169 TCGA-3G-AB19-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1170 TCGA-3Q-A9WF-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1171 TCGA-3S-A8YW-01 THYM 21 -1 1 0 0 -1 -1 0 0 NA -1 -1 -1 #> 1172 TCGA-4V-A9QI-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1173 TCGA-4V-A9QJ-01 THYM 2 0 0 0 0 0 1 0 0 0 0 0 0 #> 1174 TCGA-4V-A9QL-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1175 TCGA-4V-A9QM-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1176 TCGA-4V-A9QN-01 THYM 10 -1 1 0 0 -1 0 0 0 1 1 -1 -1 #> 1177 TCGA-4V-A9QR-01 THYM 21 0 1 0 0 0 0 0 0 1 1 -1 -1 #> 1178 TCGA-4V-A9QS-01 THYM 33 -1 1 -1 -1 -1 -1 -1 1 1 NA -1 -1 #> 1179 TCGA-4V-A9QT-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1180 TCGA-4V-A9QU-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1181 TCGA-4V-A9QW-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1182 TCGA-4V-A9QX-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1183 TCGA-4X-A9FA-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1184 TCGA-4X-A9FD-01 THYM 22 -1 1 0 0 -1 0 -1 0 0 0 -1 -1 #> 1185 TCGA-5G-A9ZZ-01 THYM 6 0 1 0 0 0 0 0 0 0 0 -1 -1 #> 1186 TCGA-5K-AAAP-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1187 TCGA-5U-AB0D-01 THYM 22 -1 1 1 -1 0 0 0 0 1 0 -1 -1 #> 1188 TCGA-5U-AB0E-01 THYM 20 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1189 TCGA-5U-AB0F-01 THYM 2 0 0 0 0 0 0 0 0 0 0 -1 0 #> 1190 TCGA-5V-A9RR-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1191 TCGA-X7-A8D6-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1192 TCGA-X7-A8D7-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1193 TCGA-X7-A8D8-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1194 TCGA-X7-A8D9-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1195 TCGA-X7-A8DB-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1196 TCGA-X7-A8DC-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1197 TCGA-X7-A8DI-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1198 TCGA-X7-A8DJ-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1199 TCGA-X7-A8M0-01 THYM 2 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1200 TCGA-X7-A8M1-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1201 TCGA-X7-A8M3-01 THYM 39 -1 1 -1 -1 -1 1 -1 -1 1 1 -1 -1 #> 1202 TCGA-X7-A8M5-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1203 TCGA-X7-A8M6-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1204 TCGA-X7-A8M7-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1205 TCGA-X7-A8M8-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1206 TCGA-XM-A8R8-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1207 TCGA-XM-A8R9-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1208 TCGA-XM-A8RB-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1209 TCGA-XM-A8RC-01 THYM 30 NA 1 0 NA -1 -1 -1 -1 1 1 -1 -1 #> 1210 TCGA-XM-A8RF-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1211 TCGA-XM-A8RG-01 THYM 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 1212 TCGA-XM-A8RL-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1213 TCGA-XM-AAZ1-01 THYM 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 1214 TCGA-XM-AAZ2-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1215 TCGA-XM-AAZ3-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1216 TCGA-XU-A92O-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1217 TCGA-XU-A92Q-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1218 TCGA-XU-A92R-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1219 TCGA-XU-A92T-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1220 TCGA-XU-A92U-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1221 TCGA-XU-A92V-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1222 TCGA-XU-A92W-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1223 TCGA-XU-A92X-01 THYM 23 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1224 TCGA-XU-A92Y-01 THYM 6 0 1 0 0 0 0 0 0 1 1 0 0 #> 1225 TCGA-XU-A92Z-01 THYM 0 0 0 0 0 0 0 0 0 0 0 NA 0 #> 1226 TCGA-XU-A930-01 THYM 24 -1 1 0 0 -1 -1 -1 -1 0 0 -1 -1 #> 1227 TCGA-XU-A931-01 THYM 12 0 1 0 0 0 0 0 0 1 1 -1 -1 #> 1228 TCGA-XU-A932-01 THYM 4 0 1 0 0 0 0 0 0 0 0 NA 0 #> 1229 TCGA-XU-A933-01 THYM 10 0 1 0 0 0 0 1 1 0 0 0 0 #> 1230 TCGA-XU-A936-01 THYM 21 0 1 0 0 0 0 0 0 1 1 -1 -1 #> 1231 TCGA-XU-AAXW-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1232 TCGA-XU-AAXX-01 THYM 0 0 NA 0 0 0 0 0 0 0 0 0 0 #> 1233 TCGA-XU-AAXY-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1234 TCGA-XU-AAXZ-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1235 TCGA-XU-AAY0-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1236 TCGA-XU-AAY1-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1237 TCGA-YT-A95D-01 THYM 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1238 TCGA-YT-A95E-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1239 TCGA-YT-A95G-01 THYM 2 0 1 0 0 0 0 0 0 0 0 0 0 #> 1240 TCGA-YT-A95H-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1241 TCGA-ZB-A961-01 THYM 7 0 1 0 0 0 0 0 0 0 0 NA 0 #> 1242 TCGA-ZB-A962-01 THYM 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1243 TCGA-ZB-A963-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1244 TCGA-ZB-A964-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1245 TCGA-ZB-A965-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1246 TCGA-ZB-A966-01 THYM 4 0 1 0 0 -1 1 0 0 0 0 0 0 #> 1247 TCGA-ZB-A969-01 THYM 4 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1248 TCGA-ZB-A96A-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1249 TCGA-ZB-A96B-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1250 TCGA-ZB-A96C-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1251 TCGA-ZB-A96D-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1252 TCGA-ZB-A96E-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1253 TCGA-ZB-A96F-01 THYM 16 0 1 0 0 0 0 0 0 0 0 -1 -1 #> 1254 TCGA-ZB-A96G-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1255 TCGA-ZB-A96H-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1256 TCGA-ZB-A96I-01 THYM 7 0 1 0 0 -1 0 0 0 0 0 0 NA #> 1257 TCGA-ZB-A96K-01 THYM 0 0 0 0 0 0 0 0 0 0 NA 0 0 #> 1258 TCGA-ZB-A96L-01 THYM 5 0 0 0 0 -1 1 0 0 0 0 0 0 #> 1259 TCGA-ZB-A96M-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1260 TCGA-ZB-A96O-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1261 TCGA-ZB-A96P-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1262 TCGA-ZB-A96Q-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1263 TCGA-ZB-A96R-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1264 TCGA-ZB-A96V-01 THYM 4 0 1 0 0 0 0 0 0 NA 0 0 0 #> 1265 TCGA-ZC-AAA7-01 THYM 11 0 1 0 0 0 1 0 0 0 0 -1 -1 #> 1266 TCGA-ZC-AAAA-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1267 TCGA-ZC-AAAF-01 THYM 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1268 TCGA-ZC-AAAH-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1269 TCGA-ZL-A9V6-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1270 TCGA-ZT-A8OM-01 THYM 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1271 TCGA-N5-A4RA-01 UCS 20 0 0 0 1 -1 1 -1 -1 NA NA 1 1 #> 1272 TCGA-N5-A4RD-01 UCS 5 NA 0 0 0 -1 NA NA 0 0 0 NA 0 #> 1273 TCGA-N5-A4RF-01 UCS 21 1 1 0 0 -1 -1 -1 -1 0 0 1 1 #> 1274 TCGA-N5-A4RJ-01 UCS 19 0 1 1 1 0 NA -1 -1 0 0 1 1 #> 1275 TCGA-N5-A4RM-01 UCS 8 0 0 0 0 NA 0 0 0 0 0 NA 0 #> 1276 TCGA-N5-A4RN-01 UCS 17 0 1 0 0 0 NA 0 NA 1 -1 1 1 #> 1277 TCGA-N5-A4RO-01 UCS 15 NA 0 0 0 NA 1 0 -1 0 0 0 0 #> 1278 TCGA-N5-A4RS-01 UCS 8 0 NA 1 1 NA 0 0 0 0 0 0 0 #> 1279 TCGA-N5-A4RT-01 UCS 20 0 1 NA 0 NA NA 1 NA NA -1 1 NA #> 1280 TCGA-N5-A4RU-01 UCS 15 0 NA 1 NA NA NA 0 NA 1 NA 1 NA #> 1281 TCGA-N5-A4RV-01 UCS 12 0 1 0 0 0 0 1 NA NA 0 1 1 #> 1282 TCGA-N5-A59E-01 UCS 19 NA 0 1 0 NA NA NA -1 1 NA NA NA #> 1283 TCGA-N5-A59F-01 UCS 25 0 0 1 NA NA -1 -1 -1 NA -1 0 -1 #> 1284 TCGA-N6-A4V9-01 UCS 14 NA NA 1 0 -1 0 0 0 0 0 0 0 #> 1285 TCGA-N6-A4VC-01 UCS 22 NA 1 1 1 -1 1 -1 NA -1 NA 1 NA #> 1286 TCGA-N6-A4VD-01 UCS 0 NA NA 0 0 0 0 0 0 0 NA 0 0 #> 1287 TCGA-N6-A4VE-01 UCS 17 -1 0 0 0 NA 1 -1 -1 0 0 1 0 #> 1288 TCGA-N6-A4VF-01 UCS 10 0 1 0 0 0 0 0 0 0 0 0 0 #> 1289 TCGA-N6-A4VG-01 UCS 25 0 1 0 0 NA 0 -1 0 1 NA 1 -1 #> 1290 TCGA-N7-A4Y0-01 UCS 8 0 0 0 0 0 0 0 0 0 1 1 1 #> 1291 TCGA-N7-A4Y5-01 UCS 21 0 -1 0 0 NA 1 -1 -1 1 -1 0 0 #> 1292 TCGA-N7-A4Y8-01 UCS 26 1 1 1 1 0 0 -1 -1 -1 -1 0 0 #> 1293 TCGA-N7-A59B-01 UCS 21 1 1 1 1 NA 1 1 NA 0 0 0 0 #> 1294 TCGA-N8-A4PI-01 UCS 11 0 0 NA -1 0 0 0 0 0 0 0 0 #> 1295 TCGA-N8-A4PL-01 UCS 22 NA 1 1 1 -1 NA 0 0 0 NA 1 -1 #> 1296 TCGA-N8-A4PM-01 UCS 12 0 0 0 0 NA -1 0 0 -1 NA 0 0 #> 1297 TCGA-N8-A4PN-01 UCS 18 0 1 0 0 1 1 0 0 0 0 1 NA #> 1298 TCGA-N8-A4PO-01 UCS 21 NA 0 NA 0 -1 NA -1 -1 1 -1 1 1 #> 1299 TCGA-N8-A4PP-01 UCS 16 NA NA 0 NA -1 1 0 NA 1 0 0 -1 #> 1300 TCGA-N8-A4PQ-01 UCS 21 -1 -1 NA 0 0 0 0 -1 1 NA -1 -1 #> 1301 TCGA-N8-A56S-01 UCS 26 0 0 1 1 0 1 0 -1 0 NA 1 1 #> 1302 TCGA-N9-A4PZ-01 UCS 20 -1 1 0 NA NA 1 1 -1 1 NA NA 1 #> 1303 TCGA-N9-A4Q1-01 UCS 21 NA 1 1 NA -1 1 1 -1 0 -1 1 1 #> 1304 TCGA-N9-A4Q3-01 UCS 17 1 1 1 NA NA 1 -1 -1 0 0 1 0 #> 1305 TCGA-N9-A4Q4-01 UCS 22 1 1 1 1 -1 0 0 -1 0 -1 NA 0 #> 1306 TCGA-N9-A4Q7-01 UCS 21 0 NA 0 0 NA 0 NA NA NA 0 1 1 #> 1307 TCGA-N9-A4Q8-01 UCS 18 1 1 0 0 NA NA 0 0 1 -1 1 0 #> 1308 TCGA-NA-A4QV-01 UCS 18 0 1 NA 1 NA 1 1 NA 0 0 -1 0 #> 1309 TCGA-NA-A4QW-01 UCS 19 0 NA 1 1 0 NA -1 NA 1 NA 1 1 #> 1310 TCGA-NA-A4QX-01 UCS 14 0 0 0 0 NA 1 0 -1 NA 0 0 0 #> 1311 TCGA-NA-A4QY-01 UCS 27 1 1 1 1 -1 -1 1 -1 0 0 0 -1 #> 1312 TCGA-NA-A4R0-01 UCS 22 1 NA 1 1 0 0 0 1 1 0 1 0 #> 1313 TCGA-NA-A4R1-01 UCS 16 0 0 0 0 NA NA -1 0 NA NA -1 0 #> 1314 TCGA-NA-A5I1-01 UCS 14 -1 -1 0 0 0 0 0 0 1 0 0 0 #> 1315 TCGA-ND-A4W6-01 UCS 21 0 -1 1 NA 0 -1 1 NA 1 -1 0 0 #> 1316 TCGA-ND-A4WA-01 UCS 27 -1 -1 0 0 0 1 -1 -1 -1 -1 0 0 #> 1317 TCGA-ND-A4WC-01 UCS 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1318 TCGA-ND-A4WF-01 UCS 14 0 0 0 NA NA NA -1 -1 0 NA NA NA #> 1319 TCGA-NF-A4WU-01 UCS 20 0 NA 1 1 -1 -1 0 0 0 -1 0 0 #> 1320 TCGA-NF-A4WX-01 UCS 27 -1 0 0 0 -1 1 1 -1 NA -1 1 -1 #> 1321 TCGA-NF-A4X2-01 UCS 11 NA 1 0 0 NA 0 0 NA 0 -1 1 0 #> 1322 TCGA-NF-A5CP-01 UCS 6 0 0 1 0 0 NA -1 0 1 0 0 0 #> 1323 TCGA-NG-A4VU-01 UCS 20 -1 1 1 NA -1 NA -1 -1 1 -1 NA NA #> 1324 TCGA-NG-A4VW-01 UCS 9 0 1 0 0 1 1 0 0 1 1 0 0 #> 1325 TCGA-QM-A5NM-01 UCS 21 -1 1 0 0 -1 0 -1 -1 0 0 -1 0 #> 1326 TCGA-QN-A5NN-01 UCS 24 -1 -1 0 0 1 1 NA 0 1 1 1 -1 #> 1327 TCGA-3Z-A93Z-01 KIRC 7 0 0 1 1 -1 NA 0 0 1 1 0 0 #> 1328 TCGA-6D-AA2E-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1329 TCGA-A3-3306-01 KIRC 9 0 0 0 0 -1 NA 0 0 0 0 -1 -1 #> 1330 TCGA-A3-3307-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1331 TCGA-A3-3308-01 KIRC 3 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1332 TCGA-A3-3311-01 KIRC 2 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1333 TCGA-A3-3313-01 KIRC 7 -1 0 0 0 0 0 0 0 0 0 NA -1 #> 1334 TCGA-A3-3316-01 KIRC 26 0 1 0 0 -1 0 -1 -1 1 1 -1 -1 #> 1335 TCGA-A3-3317-01 KIRC 8 0 0 0 0 -1 -1 0 0 0 NA NA -1 #> 1336 TCGA-A3-3319-01 KIRC 16 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1337 TCGA-A3-3320-01 KIRC 1 0 0 0 0 -1 0 0 NA 0 NA 0 NA #> 1338 TCGA-A3-3322-01 KIRC 7 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1339 TCGA-A3-3323-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1340 TCGA-A3-3324-01 KIRC 7 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1341 TCGA-A3-3325-01 KIRC 25 0 0 0 0 -1 1 0 0 1 1 0 NA #> 1342 TCGA-A3-3326-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1343 TCGA-A3-3331-01 KIRC 4 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1344 TCGA-A3-3335-01 KIRC 4 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1345 TCGA-A3-3343-01 KIRC 1 0 1 0 0 NA 0 0 0 0 0 0 0 #> 1346 TCGA-A3-3346-01 KIRC 15 0 0 0 0 -1 0 0 -1 0 0 -1 -1 #> 1347 TCGA-A3-3347-01 KIRC 12 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1348 TCGA-A3-3351-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1349 TCGA-A3-3352-01 KIRC 9 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1350 TCGA-A3-3357-01 KIRC 5 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1351 TCGA-A3-3358-01 KIRC 9 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1352 TCGA-A3-3359-01 KIRC 1 0 0 NA 0 -1 NA 0 0 0 NA 0 0 #> 1353 TCGA-A3-3363-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1354 TCGA-A3-3367-01 KIRC 1 0 0 0 0 -1 NA 0 NA 0 0 0 0 #> 1355 TCGA-A3-3370-01 KIRC 1 0 NA 0 0 -1 NA 0 0 0 NA 0 0 #> 1356 TCGA-A3-3372-01 KIRC 24 NA 1 1 1 -1 -1 0 0 1 1 0 0 #> 1357 TCGA-A3-3373-01 KIRC 4 -1 0 0 0 -1 0 0 NA 0 0 0 0 #> 1358 TCGA-A3-3374-01 KIRC 33 -1 -1 -1 -1 1 1 1 1 1 1 -1 -1 #> 1359 TCGA-A3-3376-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1360 TCGA-A3-3378-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1361 TCGA-A3-3380-01 KIRC 10 -1 -1 0 0 -1 -1 -1 -1 0 NA -1 -1 #> 1362 TCGA-A3-3382-01 KIRC 28 0 1 1 1 -1 -1 0 0 1 1 -1 -1 #> 1363 TCGA-A3-3383-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1364 TCGA-A3-3385-01 KIRC 7 0 0 0 0 0 0 -1 0 1 1 0 0 #> 1365 TCGA-A3-3387-01 KIRC 3 0 0 0 0 -1 1 0 0 0 NA 0 0 #> 1366 TCGA-A3-A6NI-01 KIRC 4 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1367 TCGA-A3-A6NJ-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1368 TCGA-A3-A6NL-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1369 TCGA-A3-A6NN-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1370 TCGA-A3-A8CQ-01 KIRC 5 0 0 1 1 -1 NA 0 0 0 0 0 NA #> 1371 TCGA-A3-A8OU-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1372 TCGA-A3-A8OV-01 KIRC 3 0 NA 0 0 -1 NA 0 0 0 0 0 0 #> 1373 TCGA-A3-A8OW-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1374 TCGA-A3-A8OX-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1375 TCGA-AK-3426-01 KIRC 7 0 0 0 0 NA 0 0 0 0 0 -1 -1 #> 1376 TCGA-AK-3427-01 KIRC 8 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 1377 TCGA-AK-3428-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1378 TCGA-AK-3430-01 KIRC 18 0 0 1 1 -1 0 1 1 1 1 -1 -1 #> 1379 TCGA-AK-3431-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1380 TCGA-AK-3433-01 KIRC 15 -1 -1 -1 -1 -1 -1 0 0 -1 NA -1 -1 #> 1381 TCGA-AK-3434-01 KIRC 6 0 0 0 0 -1 1 0 0 0 0 -1 -1 #> 1382 TCGA-AK-3436-01 KIRC 21 NA 0 0 0 -1 1 -1 -1 1 1 -1 -1 #> 1383 TCGA-AK-3440-01 KIRC 16 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1384 TCGA-AK-3443-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1385 TCGA-AK-3444-01 KIRC 4 0 0 1 1 NA 0 0 0 0 NA 0 0 #> 1386 TCGA-AK-3445-01 KIRC 11 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1387 TCGA-AK-3447-01 KIRC 7 -1 0 -1 -1 0 0 0 0 0 0 -1 -1 #> 1388 TCGA-AK-3450-01 KIRC 3 0 1 0 NA -1 0 0 0 0 0 0 0 #> 1389 TCGA-AK-3451-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1390 TCGA-AK-3453-01 KIRC 31 -1 -1 -1 -1 1 1 -1 -1 0 0 -1 -1 #> 1391 TCGA-AK-3454-01 KIRC 1 0 NA 0 0 -1 0 0 0 0 NA 0 NA #> 1392 TCGA-AK-3455-01 KIRC 3 0 1 0 0 -1 0 0 0 0 0 0 0 #> 1393 TCGA-AK-3456-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1394 TCGA-AK-3458-01 KIRC 10 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1395 TCGA-AK-3460-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1396 TCGA-AK-3465-01 KIRC 13 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1397 TCGA-AS-3777-01 KIRC 14 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1398 TCGA-AS-3778-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1399 TCGA-B0-4688-01 KIRC 12 0 0 0 0 0 0 1 NA 0 0 NA 0 #> 1400 TCGA-B0-4690-01 KIRC 11 NA 0 1 NA 0 0 0 0 0 0 0 NA #> 1401 TCGA-B0-4691-01 KIRC 8 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1402 TCGA-B0-4693-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1403 TCGA-B0-4694-01 KIRC 5 0 0 0 0 -1 NA 0 0 0 0 -1 -1 #> 1404 TCGA-B0-4696-01 KIRC 13 0 NA NA -1 -1 NA 0 NA NA 0 NA -1 #> 1405 TCGA-B0-4698-01 KIRC 16 NA -1 0 0 0 0 0 NA 1 0 NA -1 #> 1406 TCGA-B0-4699-01 KIRC 15 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1407 TCGA-B0-4700-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1408 TCGA-B0-4701-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1409 TCGA-B0-4703-01 KIRC 5 0 0 0 NA -1 0 0 0 1 1 0 0 #> 1410 TCGA-B0-4706-01 KIRC 1 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1411 TCGA-B0-4707-01 KIRC 29 0 0 1 NA -1 0 -1 -1 1 1 -1 -1 #> 1412 TCGA-B0-4710-01 KIRC 20 0 0 1 1 -1 0 -1 -1 1 1 0 0 #> 1413 TCGA-B0-4712-01 KIRC 30 0 0 0 0 -1 1 -1 -1 1 1 -1 -1 #> 1414 TCGA-B0-4713-01 KIRC 7 NA 1 0 0 -1 1 0 0 0 NA 0 0 #> 1415 TCGA-B0-4714-01 KIRC 3 0 0 0 0 NA 0 0 0 0 1 0 0 #> 1416 TCGA-B0-4718-01 KIRC 2 NA 0 0 0 NA 0 0 0 0 0 0 0 #> 1417 TCGA-B0-4810-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 NA 0 NA #> 1418 TCGA-B0-4811-01 KIRC 26 0 0 1 1 -1 -1 -1 -1 1 1 1 1 #> 1419 TCGA-B0-4813-01 KIRC 6 0 0 1 NA -1 NA 1 NA 0 0 -1 NA #> 1420 TCGA-B0-4814-01 KIRC 5 0 0 0 0 NA 0 -1 -1 1 1 0 0 #> 1421 TCGA-B0-4815-01 KIRC 15 0 0 0 0 -1 -1 0 NA 1 0 0 0 #> 1422 TCGA-B0-4816-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1423 TCGA-B0-4817-01 KIRC 5 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1424 TCGA-B0-4818-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1425 TCGA-B0-4819-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1426 TCGA-B0-4821-01 KIRC 9 0 0 1 NA -1 0 0 0 1 NA 0 0 #> 1427 TCGA-B0-4822-01 KIRC 26 -1 NA 0 0 -1 -1 -1 -1 1 1 -1 -1 #> 1428 TCGA-B0-4823-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1429 TCGA-B0-4824-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1430 TCGA-B0-4827-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1431 TCGA-B0-4828-01 KIRC 6 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1432 TCGA-B0-4833-01 KIRC 5 0 0 0 0 -1 1 0 0 1 1 0 0 #> 1433 TCGA-B0-4834-01 KIRC 3 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 1434 TCGA-B0-4836-01 KIRC 14 0 0 0 0 -1 -1 0 NA 1 1 -1 -1 #> 1435 TCGA-B0-4837-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 0 0 NA #> 1436 TCGA-B0-4838-01 KIRC 11 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1437 TCGA-B0-4839-01 KIRC 8 0 0 0 0 0 0 0 0 1 1 0 0 #> 1438 TCGA-B0-4841-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1439 TCGA-B0-4842-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1440 TCGA-B0-4843-01 KIRC 2 NA 0 0 0 -1 0 0 0 0 0 0 0 #> 1441 TCGA-B0-4844-01 KIRC 17 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1442 TCGA-B0-4845-01 KIRC 13 -1 -1 0 0 -1 NA -1 -1 0 0 0 0 #> 1443 TCGA-B0-4846-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1444 TCGA-B0-4847-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1445 TCGA-B0-4848-01 KIRC 4 0 1 0 0 -1 NA 0 0 0 0 0 NA #> 1446 TCGA-B0-4849-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 -1 #> 1447 TCGA-B0-4852-01 KIRC 3 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1448 TCGA-B0-4945-01 KIRC 4 NA 0 0 0 -1 0 0 0 0 NA 0 0 #> 1449 TCGA-B0-5075-01 KIRC 6 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1450 TCGA-B0-5077-01 KIRC 7 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1451 TCGA-B0-5080-01 KIRC 2 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1452 TCGA-B0-5081-01 KIRC 2 0 0 0 0 NA 0 0 0 NA NA 0 0 #> 1453 TCGA-B0-5084-01 KIRC 11 -1 NA 0 0 0 NA -1 -1 0 0 -1 -1 #> 1454 TCGA-B0-5085-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1455 TCGA-B0-5088-01 KIRC 1 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1456 TCGA-B0-5092-01 KIRC 3 0 1 0 0 -1 0 0 0 0 NA 0 0 #> 1457 TCGA-B0-5094-01 KIRC 14 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1458 TCGA-B0-5095-01 KIRC 5 0 0 0 NA -1 0 0 0 1 1 0 0 #> 1459 TCGA-B0-5096-01 KIRC 7 0 1 0 0 -1 0 0 0 0 0 0 0 #> 1460 TCGA-B0-5097-01 KIRC 7 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1461 TCGA-B0-5098-01 KIRC 6 -1 0 0 0 -1 NA -1 -1 0 0 0 0 #> 1462 TCGA-B0-5099-01 KIRC 3 0 0 1 NA -1 NA 0 0 0 NA 0 0 #> 1463 TCGA-B0-5100-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1464 TCGA-B0-5102-01 KIRC 17 -1 -1 0 0 -1 1 0 0 1 1 0 NA #> 1465 TCGA-B0-5104-01 KIRC 1 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1466 TCGA-B0-5106-01 KIRC 8 0 0 0 0 0 0 0 0 1 1 0 0 #> 1467 TCGA-B0-5107-01 KIRC 6 0 0 0 0 NA 0 0 0 -1 NA 0 0 #> 1468 TCGA-B0-5108-01 KIRC 5 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1469 TCGA-B0-5109-01 KIRC 26 -1 1 1 NA -1 NA NA -1 1 1 -1 -1 #> 1470 TCGA-B0-5110-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1471 TCGA-B0-5113-01 KIRC 27 0 0 1 1 -1 0 -1 -1 1 1 1 1 #> 1472 TCGA-B0-5115-01 KIRC 2 0 NA 0 0 NA 0 0 0 1 1 0 0 #> 1473 TCGA-B0-5116-01 KIRC 14 0 0 0 NA -1 NA -1 -1 0 0 0 0 #> 1474 TCGA-B0-5117-01 KIRC 11 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1475 TCGA-B0-5119-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1476 TCGA-B0-5120-01 KIRC 2 0 0 0 NA -1 -1 0 0 0 NA 0 0 #> 1477 TCGA-B0-5121-01 KIRC 1 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1478 TCGA-B0-5400-01 KIRC 4 0 0 0 0 0 0 0 0 0 NA 0 0 #> 1479 TCGA-B0-5402-01 KIRC 6 NA 0 0 0 -1 0 0 0 0 NA 0 NA #> 1480 TCGA-B0-5690-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1481 TCGA-B0-5691-01 KIRC 0 0 0 0 0 NA 0 0 NA 0 NA 0 0 #> 1482 TCGA-B0-5692-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1483 TCGA-B0-5693-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1484 TCGA-B0-5694-01 KIRC 5 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1485 TCGA-B0-5695-01 KIRC 2 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1486 TCGA-B0-5696-01 KIRC 6 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1487 TCGA-B0-5697-01 KIRC 7 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1488 TCGA-B0-5698-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1489 TCGA-B0-5699-01 KIRC 1 0 0 0 0 -1 0 0 NA 0 0 0 0 #> 1490 TCGA-B0-5701-01 KIRC 7 NA NA 0 0 -1 0 0 NA 0 NA 0 0 #> 1491 TCGA-B0-5703-01 KIRC 5 -1 NA 0 0 -1 NA 0 0 0 0 0 0 #> 1492 TCGA-B0-5705-01 KIRC 2 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1493 TCGA-B0-5709-01 KIRC 1 NA 0 0 0 -1 0 0 NA 0 NA 0 0 #> 1494 TCGA-B0-5710-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1495 TCGA-B0-5711-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1496 TCGA-B0-5712-01 KIRC 4 0 0 0 0 0 0 0 0 1 1 0 0 #> 1497 TCGA-B0-5713-01 KIRC 5 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1498 TCGA-B0-5812-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1499 TCGA-B2-3923-01 KIRC 10 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1500 TCGA-B2-3924-01 KIRC 5 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1501 TCGA-B2-4098-01 KIRC 4 -1 0 0 0 0 0 0 0 0 0 0 0 #> 1502 TCGA-B2-4099-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1503 TCGA-B2-4101-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1504 TCGA-B2-4102-01 KIRC 1 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1505 TCGA-B2-5633-01 KIRC 7 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1506 TCGA-B2-5635-01 KIRC 3 0 0 0 0 0 0 0 0 1 1 0 0 #> 1507 TCGA-B2-5639-01 KIRC 5 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1508 TCGA-B2-5641-01 KIRC 3 0 0 0 NA -1 NA 0 0 0 NA 0 NA #> 1509 TCGA-B2-A4SR-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1510 TCGA-B4-5377-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1511 TCGA-B4-5378-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1512 TCGA-B4-5832-01 KIRC 29 NA 0 1 1 -1 NA 0 0 0 NA -1 -1 #> 1513 TCGA-B4-5834-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1514 TCGA-B4-5835-01 KIRC 12 -1 0 0 0 -1 0 -1 0 0 0 0 -1 #> 1515 TCGA-B4-5836-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1516 TCGA-B4-5838-01 KIRC 24 0 0 1 1 NA 1 0 0 1 1 0 0 #> 1517 TCGA-B4-5843-01 KIRC 7 0 1 1 1 -1 0 0 0 0 0 0 0 #> 1518 TCGA-B4-5844-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1519 TCGA-B8-4143-01 KIRC 12 NA 0 0 0 NA 1 -1 -1 -1 NA NA -1 #> 1520 TCGA-B8-4146-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1521 TCGA-B8-4148-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1522 TCGA-B8-4151-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1523 TCGA-B8-4153-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1524 TCGA-B8-4154-01 KIRC 1 0 0 0 0 NA 0 -1 0 0 0 0 0 #> 1525 TCGA-B8-4619-01 KIRC 6 -1 -1 0 0 0 0 0 0 0 0 0 0 #> 1526 TCGA-B8-4620-01 KIRC 19 0 0 1 NA -1 NA 0 0 1 1 -1 -1 #> 1527 TCGA-B8-4621-01 KIRC 12 0 0 0 0 0 NA 0 0 0 0 0 0 #> 1528 TCGA-B8-4622-01 KIRC 8 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1529 TCGA-B8-5158-01 KIRC 10 0 0 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1530 TCGA-B8-5159-01 KIRC 5 0 0 1 1 -1 0 0 0 1 1 0 0 #> 1531 TCGA-B8-5162-01 KIRC 4 NA 0 0 0 -1 NA -1 -1 0 0 0 0 #> 1532 TCGA-B8-5163-01 KIRC 14 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1533 TCGA-B8-5164-01 KIRC 4 NA 0 0 0 -1 NA 0 0 0 0 0 0 #> 1534 TCGA-B8-5165-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1535 TCGA-B8-5545-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1536 TCGA-B8-5546-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1537 TCGA-B8-5549-01 KIRC 25 0 0 1 NA -1 NA 0 0 1 1 1 1 #> 1538 TCGA-B8-5550-01 KIRC 11 NA 0 1 1 NA 0 0 0 1 1 0 0 #> 1539 TCGA-B8-5551-01 KIRC 32 NA 1 1 1 -1 1 -1 -1 1 1 0 0 #> 1540 TCGA-B8-5552-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1541 TCGA-B8-5553-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1542 TCGA-B8-A54D-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1543 TCGA-B8-A54E-01 KIRC 5 0 0 0 0 0 0 0 0 0 0 0 0 #> 1544 TCGA-B8-A54F-01 KIRC 4 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1545 TCGA-B8-A54G-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 NA 0 NA #> 1546 TCGA-B8-A54H-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1547 TCGA-B8-A54I-01 KIRC 19 0 0 1 1 -1 1 0 0 1 1 NA 0 #> 1548 TCGA-B8-A54J-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1549 TCGA-B8-A7U6-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1550 TCGA-B8-A8YJ-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1551 TCGA-BP-4158-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1552 TCGA-BP-4159-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1553 TCGA-BP-4160-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1554 TCGA-BP-4161-01 KIRC 1 0 1 0 NA NA 0 0 0 0 0 0 0 #> 1555 TCGA-BP-4162-01 KIRC 10 0 0 1 1 NA 0 0 0 1 1 0 0 #> 1556 TCGA-BP-4163-01 KIRC 7 0 0 0 0 -1 1 0 0 0 0 0 0 #> 1557 TCGA-BP-4164-01 KIRC 15 0 0 0 0 -1 0 -1 -1 0 0 -1 -1 #> 1558 TCGA-BP-4165-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1559 TCGA-BP-4166-01 KIRC 24 0 0 1 NA -1 -1 1 1 1 1 0 0 #> 1560 TCGA-BP-4167-01 KIRC 7 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1561 TCGA-BP-4169-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1562 TCGA-BP-4170-01 KIRC 3 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1563 TCGA-BP-4174-01 KIRC 17 0 1 1 1 -1 0 0 0 1 1 0 0 #> 1564 TCGA-BP-4176-01 KIRC 19 -1 1 0 0 -1 NA 0 0 1 1 -1 -1 #> 1565 TCGA-BP-4177-01 KIRC 7 0 0 0 0 0 0 0 0 1 1 0 0 #> 1566 TCGA-BP-4325-01 KIRC 5 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1567 TCGA-BP-4326-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1568 TCGA-BP-4327-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1569 TCGA-BP-4329-01 KIRC 2 0 NA 0 0 -1 NA 0 0 0 0 0 0 #> 1570 TCGA-BP-4330-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1571 TCGA-BP-4332-01 KIRC 4 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1572 TCGA-BP-4334-01 KIRC 12 -1 -1 -1 -1 NA 0 0 0 0 0 -1 -1 #> 1573 TCGA-BP-4335-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1574 TCGA-BP-4337-01 KIRC 18 0 0 1 1 NA 1 0 0 1 NA 0 0 #> 1575 TCGA-BP-4340-01 KIRC 6 NA 0 1 1 -1 0 0 0 0 0 0 0 #> 1576 TCGA-BP-4341-01 KIRC 1 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1577 TCGA-BP-4343-01 KIRC 21 NA 0 0 0 -1 0 -1 -1 1 1 0 0 #> 1578 TCGA-BP-4346-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 NA #> 1579 TCGA-BP-4347-01 KIRC 9 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1580 TCGA-BP-4349-01 KIRC 0 0 0 0 NA NA 0 0 0 0 0 0 0 #> 1581 TCGA-BP-4351-01 KIRC 27 0 0 1 1 -1 1 -1 -1 1 1 0 0 #> 1582 TCGA-BP-4352-01 KIRC 26 NA NA -1 -1 -1 NA 0 0 1 1 -1 -1 #> 1583 TCGA-BP-4354-01 KIRC 6 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1584 TCGA-BP-4355-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1585 TCGA-BP-4756-01 KIRC 9 NA 1 1 1 0 0 0 0 0 0 0 0 #> 1586 TCGA-BP-4758-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1587 TCGA-BP-4760-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1588 TCGA-BP-4761-01 KIRC 12 0 0 0 NA -1 1 0 0 1 0 -1 -1 #> 1589 TCGA-BP-4762-01 KIRC 1 0 0 0 0 NA 0 -1 0 0 NA 0 0 #> 1590 TCGA-BP-4763-01 KIRC 10 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1591 TCGA-BP-4765-01 KIRC 2 0 NA 0 0 -1 0 0 0 0 0 0 0 #> 1592 TCGA-BP-4766-01 KIRC 4 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1593 TCGA-BP-4768-01 KIRC 24 0 NA 1 1 -1 NA 0 0 1 NA 0 0 #> 1594 TCGA-BP-4770-01 KIRC 14 0 0 0 -1 0 NA -1 -1 1 NA -1 -1 #> 1595 TCGA-BP-4774-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1596 TCGA-BP-4775-01 KIRC 15 -1 -1 1 1 NA 0 0 0 0 NA -1 -1 #> 1597 TCGA-BP-4776-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1598 TCGA-BP-4777-01 KIRC 3 0 0 0 0 -1 -1 0 0 0 NA 0 NA #> 1599 TCGA-BP-4782-01 KIRC 5 0 0 0 0 NA 0 0 NA 0 0 0 0 #> 1600 TCGA-BP-4787-01 KIRC 18 0 0 0 0 NA 0 1 -1 1 1 0 0 #> 1601 TCGA-BP-4789-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1602 TCGA-BP-4790-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1603 TCGA-BP-4795-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1604 TCGA-BP-4797-01 KIRC 16 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1605 TCGA-BP-4798-01 KIRC 13 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1606 TCGA-BP-4799-01 KIRC 28 -1 -1 0 0 -1 -1 -1 -1 0 0 0 0 #> 1607 TCGA-BP-4801-01 KIRC 2 0 0 0 0 -1 -1 0 0 0 NA 0 0 #> 1608 TCGA-BP-4803-01 KIRC 4 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1609 TCGA-BP-4807-01 KIRC 2 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1610 TCGA-BP-4959-01 KIRC 5 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1611 TCGA-BP-4960-01 KIRC 13 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1612 TCGA-BP-4961-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1613 TCGA-BP-4962-01 KIRC 6 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1614 TCGA-BP-4963-01 KIRC 8 0 NA 0 0 -1 0 0 0 0 NA 0 -1 #> 1615 TCGA-BP-4964-01 KIRC 0 0 0 0 0 NA NA 0 0 0 0 0 0 #> 1616 TCGA-BP-4965-01 KIRC 2 NA 0 0 0 -1 0 0 0 0 NA 0 0 #> 1617 TCGA-BP-4967-01 KIRC 11 0 0 0 0 0 0 0 0 1 1 0 0 #> 1618 TCGA-BP-4968-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1619 TCGA-BP-4969-01 KIRC 26 -1 -1 0 0 -1 0 -1 -1 0 NA -1 -1 #> 1620 TCGA-BP-4970-01 KIRC 2 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1621 TCGA-BP-4971-01 KIRC 6 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1622 TCGA-BP-4972-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1623 TCGA-BP-4973-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1624 TCGA-BP-4974-01 KIRC 2 0 0 0 0 -1 0 -1 NA 0 NA 0 0 #> 1625 TCGA-BP-4975-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1626 TCGA-BP-4977-01 KIRC 12 0 0 0 0 -1 0 1 1 0 NA 0 0 #> 1627 TCGA-BP-4981-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1628 TCGA-BP-4982-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1629 TCGA-BP-4983-01 KIRC 5 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1630 TCGA-BP-4985-01 KIRC 26 0 0 1 1 -1 NA NA 0 1 1 NA 1 #> 1631 TCGA-BP-4987-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1632 TCGA-BP-4989-01 KIRC 10 NA 0 1 NA -1 0 1 1 1 NA 0 0 #> 1633 TCGA-BP-4991-01 KIRC 2 0 0 0 NA -1 NA 0 1 0 0 0 0 #> 1634 TCGA-BP-4992-01 KIRC 16 0 0 0 0 -1 -1 0 0 1 1 -1 -1 #> 1635 TCGA-BP-4993-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 NA #> 1636 TCGA-BP-4994-01 KIRC 18 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 #> 1637 TCGA-BP-4998-01 KIRC 3 0 0 0 0 0 0 0 0 0 0 0 0 #> 1638 TCGA-BP-4999-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1639 TCGA-BP-5000-01 KIRC 10 0 0 0 0 -1 0 0 0 0 0 0 NA #> 1640 TCGA-BP-5001-01 KIRC 1 0 0 0 NA NA 0 0 0 0 0 0 0 #> 1641 TCGA-BP-5004-01 KIRC 7 -1 0 0 0 -1 0 0 0 1 NA 0 0 #> 1642 TCGA-BP-5007-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1643 TCGA-BP-5008-01 KIRC 2 0 0 0 NA -1 -1 0 0 0 NA 0 0 #> 1644 TCGA-BP-5010-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1645 TCGA-BP-5168-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1646 TCGA-BP-5169-01 KIRC 9 0 0 0 0 -1 1 0 0 0 0 0 -1 #> 1647 TCGA-BP-5170-01 KIRC 3 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1648 TCGA-BP-5173-01 KIRC 30 -1 1 1 1 -1 -1 -1 -1 1 1 0 0 #> 1649 TCGA-BP-5174-01 KIRC 2 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1650 TCGA-BP-5175-01 KIRC 23 NA 1 -1 -1 NA 1 0 0 1 1 -1 -1 #> 1651 TCGA-BP-5176-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1652 TCGA-BP-5177-01 KIRC 5 0 0 0 NA NA 0 0 1 0 1 1 0 #> 1653 TCGA-BP-5178-01 KIRC 21 0 0 1 1 -1 0 0 0 0 NA -1 -1 #> 1654 TCGA-BP-5180-01 KIRC 7 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1655 TCGA-BP-5182-01 KIRC 4 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1656 TCGA-BP-5183-01 KIRC 6 0 0 0 0 -1 0 -1 -1 0 NA 0 0 #> 1657 TCGA-BP-5184-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1658 TCGA-BP-5185-01 KIRC 23 0 0 1 1 -1 -1 0 0 1 1 -1 -1 #> 1659 TCGA-BP-5186-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1660 TCGA-BP-5187-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1661 TCGA-BP-5189-01 KIRC 4 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1662 TCGA-BP-5190-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1663 TCGA-BP-5191-01 KIRC 17 0 0 0 0 NA 0 0 0 1 1 -1 -1 #> 1664 TCGA-BP-5192-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1665 TCGA-BP-5194-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1666 TCGA-BP-5195-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1667 TCGA-BP-5196-01 KIRC 14 0 0 0 NA -1 0 -1 -1 0 0 0 0 #> 1668 TCGA-BP-5198-01 KIRC 20 0 0 0 0 -1 1 -1 -1 0 0 0 0 #> 1669 TCGA-BP-5200-01 KIRC 27 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1670 TCGA-BP-5201-01 KIRC 8 0 0 0 0 -1 0 NA 0 0 NA -1 -1 #> 1671 TCGA-BP-5202-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1672 TCGA-CJ-4634-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1673 TCGA-CJ-4635-01 KIRC 23 -1 1 0 0 -1 -1 0 0 1 1 -1 -1 #> 1674 TCGA-CJ-4636-01 KIRC 12 0 0 0 0 -1 0 0 NA 1 1 0 0 #> 1675 TCGA-CJ-4637-01 KIRC 3 0 NA 0 0 -1 0 0 0 0 NA 0 0 #> 1676 TCGA-CJ-4638-01 KIRC 4 0 NA 0 0 NA 0 0 0 0 NA 0 0 #> 1677 TCGA-CJ-4639-01 KIRC 2 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1678 TCGA-CJ-4640-01 KIRC 8 -1 1 0 0 -1 1 0 0 0 0 0 NA #> 1679 TCGA-CJ-4643-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1680 TCGA-CJ-4644-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1681 TCGA-CJ-4868-01 KIRC 2 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1682 TCGA-CJ-4869-01 KIRC 2 NA 0 0 0 -1 0 0 0 0 0 0 0 #> 1683 TCGA-CJ-4871-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1684 TCGA-CJ-4873-01 KIRC 20 0 NA 0 0 -1 NA 0 0 1 1 0 0 #> 1685 TCGA-CJ-4874-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1686 TCGA-CJ-4875-01 KIRC 10 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1687 TCGA-CJ-4876-01 KIRC 9 -1 1 1 1 -1 0 0 0 0 NA 0 NA #> 1688 TCGA-CJ-4878-01 KIRC 3 0 NA 0 0 -1 NA -1 0 0 0 0 NA #> 1689 TCGA-CJ-4881-01 KIRC 13 0 1 0 0 -1 0 0 0 1 0 0 0 #> 1690 TCGA-CJ-4882-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1691 TCGA-CJ-4884-01 KIRC 4 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1692 TCGA-CJ-4885-01 KIRC 11 0 0 0 0 NA 0 0 0 1 1 1 1 #> 1693 TCGA-CJ-4886-01 KIRC 1 0 0 0 0 -1 NA 0 0 0 NA 0 0 #> 1694 TCGA-CJ-4887-01 KIRC 6 0 0 0 0 -1 0 0 0 1 1 0 -1 #> 1695 TCGA-CJ-4891-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1696 TCGA-CJ-4892-01 KIRC 3 0 0 0 0 -1 NA 0 0 1 1 0 NA #> 1697 TCGA-CJ-4893-01 KIRC 7 0 0 1 1 -1 0 0 0 0 NA 0 -1 #> 1698 TCGA-CJ-4894-01 KIRC 4 NA 0 0 0 -1 0 -1 0 0 0 0 0 #> 1699 TCGA-CJ-4895-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 NA #> 1700 TCGA-CJ-4897-01 KIRC 34 -1 -1 1 1 NA 1 -1 -1 1 1 -1 -1 #> 1701 TCGA-CJ-4899-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1702 TCGA-CJ-4900-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1703 TCGA-CJ-4901-01 KIRC 33 -1 -1 1 1 -1 1 -1 -1 -1 NA -1 -1 #> 1704 TCGA-CJ-4902-01 KIRC 1 0 0 0 NA -1 0 0 0 0 NA 0 0 #> 1705 TCGA-CJ-4903-01 KIRC 1 NA 0 0 0 -1 NA 0 0 0 0 0 0 #> 1706 TCGA-CJ-4904-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1707 TCGA-CJ-4905-01 KIRC 3 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1708 TCGA-CJ-4907-01 KIRC 1 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1709 TCGA-CJ-4908-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1710 TCGA-CJ-4912-01 KIRC 9 0 0 0 0 0 0 0 0 1 1 0 0 #> 1711 TCGA-CJ-4913-01 KIRC 1 0 0 0 0 NA 0 -1 NA 0 NA 0 0 #> 1712 TCGA-CJ-4916-01 KIRC 3 0 1 0 0 -1 0 0 0 0 NA 0 0 #> 1713 TCGA-CJ-4918-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1714 TCGA-CJ-4920-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1715 TCGA-CJ-4923-01 KIRC 1 0 1 0 0 NA 0 0 0 0 NA 0 0 #> 1716 TCGA-CJ-5671-01 KIRC 24 0 0 1 1 -1 1 0 0 1 1 1 1 #> 1717 TCGA-CJ-5672-01 KIRC 7 0 0 1 1 -1 0 0 0 0 NA 0 0 #> 1718 TCGA-CJ-5675-01 KIRC 4 0 1 0 0 -1 0 0 0 0 NA 0 -1 #> 1719 TCGA-CJ-5676-01 KIRC 7 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1720 TCGA-CJ-5677-01 KIRC 7 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1721 TCGA-CJ-5678-01 KIRC 4 -1 1 0 0 -1 0 0 0 0 NA 0 0 #> 1722 TCGA-CJ-5679-01 KIRC 25 -1 1 0 0 -1 -1 -1 -1 1 1 -1 -1 #> 1723 TCGA-CJ-5680-01 KIRC 3 0 0 0 0 NA 0 0 0 0 0 0 NA #> 1724 TCGA-CJ-5681-01 KIRC 0 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1725 TCGA-CJ-5682-01 KIRC 23 0 0 1 1 -1 -1 0 0 1 1 0 0 #> 1726 TCGA-CJ-5683-01 KIRC 6 0 0 0 0 -1 NA 0 0 1 1 0 0 #> 1727 TCGA-CJ-5684-01 KIRC 3 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1728 TCGA-CJ-5686-01 KIRC 4 0 0 0 0 NA 0 0 0 1 1 0 0 #> 1729 TCGA-CJ-5689-01 KIRC 6 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1730 TCGA-CJ-6027-01 KIRC 10 NA 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1731 TCGA-CJ-6028-01 KIRC 36 -1 -1 1 1 -1 0 -1 -1 1 1 -1 -1 #> 1732 TCGA-CJ-6030-01 KIRC 7 NA 0 0 0 -1 0 -1 0 0 0 0 0 #> 1733 TCGA-CJ-6031-01 KIRC 2 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1734 TCGA-CJ-6032-01 KIRC 6 0 NA 1 1 -1 0 0 0 0 0 0 -1 #> 1735 TCGA-CJ-6033-01 KIRC 5 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1736 TCGA-CW-5580-01 KIRC 3 0 0 0 0 -1 NA 0 0 0 0 0 0 #> 1737 TCGA-CW-5581-01 KIRC 2 0 0 0 0 NA 0 NA 0 0 NA 0 0 #> 1738 TCGA-CW-5583-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1739 TCGA-CW-5584-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 NA #> 1740 TCGA-CW-5585-01 KIRC 4 0 NA 0 0 NA 0 0 0 0 NA 0 -1 #> 1741 TCGA-CW-5587-01 KIRC 7 0 1 1 1 -1 0 0 0 1 1 0 0 #> 1742 TCGA-CW-5588-01 KIRC 23 -1 -1 0 0 NA 0 -1 -1 1 1 -1 -1 #> 1743 TCGA-CW-5591-01 KIRC 26 -1 -1 1 1 -1 0 -1 -1 0 NA -1 -1 #> 1744 TCGA-CW-6088-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1745 TCGA-CW-6090-01 KIRC 13 -1 1 0 NA -1 -1 -1 -1 0 0 0 0 #> 1746 TCGA-CW-6093-01 KIRC 2 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1747 TCGA-CW-6097-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1748 TCGA-CZ-4853-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA -1 -1 #> 1749 TCGA-CZ-4854-01 KIRC 32 -1 NA 0 0 -1 -1 -1 -1 1 1 -1 -1 #> 1750 TCGA-CZ-4856-01 KIRC 3 0 0 0 0 -1 0 0 NA 0 NA 0 0 #> 1751 TCGA-CZ-4857-01 KIRC 12 NA 0 0 0 -1 0 0 0 0 NA 0 0 #> 1752 TCGA-CZ-4858-01 KIRC 24 NA 1 1 0 -1 1 -1 -1 0 NA -1 -1 #> 1753 TCGA-CZ-4859-01 KIRC 4 0 NA 1 NA -1 0 0 0 0 0 0 NA #> 1754 TCGA-CZ-4860-01 KIRC 23 0 0 1 1 -1 1 -1 -1 0 NA 0 0 #> 1755 TCGA-CZ-4861-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1756 TCGA-CZ-4862-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1757 TCGA-CZ-4863-01 KIRC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1758 TCGA-CZ-4864-01 KIRC 5 NA 0 0 0 -1 -1 0 0 1 1 0 NA #> 1759 TCGA-CZ-4866-01 KIRC 29 0 0 0 0 NA 0 0 0 1 1 0 -1 #> 1760 TCGA-CZ-5451-01 KIRC 4 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1761 TCGA-CZ-5452-01 KIRC 5 0 0 0 0 -1 -1 0 0 0 0 NA -1 #> 1762 TCGA-CZ-5453-01 KIRC 3 0 0 0 NA -1 NA 0 0 0 0 0 0 #> 1763 TCGA-CZ-5454-01 KIRC 4 0 NA 0 0 NA 0 0 0 0 NA 0 0 #> 1764 TCGA-CZ-5455-01 KIRC 3 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1765 TCGA-CZ-5456-01 KIRC 31 -1 -1 0 0 NA 0 -1 -1 -1 NA -1 -1 #> 1766 TCGA-CZ-5457-01 KIRC 28 -1 -1 1 1 -1 -1 -1 -1 1 1 0 0 #> 1767 TCGA-CZ-5458-01 KIRC 2 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1768 TCGA-CZ-5459-01 KIRC 2 0 0 0 0 -1 -1 0 0 0 0 0 0 #> 1769 TCGA-CZ-5460-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1770 TCGA-CZ-5461-01 KIRC 23 0 0 1 1 -1 -1 -1 -1 1 1 0 0 #> 1771 TCGA-CZ-5462-01 KIRC 6 -1 0 0 0 -1 NA 0 0 0 NA 0 NA #> 1772 TCGA-CZ-5463-01 KIRC 7 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1773 TCGA-CZ-5464-01 KIRC 15 0 0 0 0 -1 1 0 NA 1 1 0 0 #> 1774 TCGA-CZ-5465-01 KIRC 29 NA 1 1 1 -1 1 -1 -1 1 1 -1 -1 #> 1775 TCGA-CZ-5466-01 KIRC 11 0 0 0 0 -1 0 0 0 1 1 0 0 #> 1776 TCGA-CZ-5467-01 KIRC 4 0 0 0 0 NA NA 0 0 0 NA 0 0 #> 1777 TCGA-CZ-5468-01 KIRC 21 0 0 0 NA -1 NA 0 0 1 1 -1 NA #> 1778 TCGA-CZ-5469-01 KIRC 31 -1 -1 1 1 -1 NA -1 -1 -1 NA 0 0 #> 1779 TCGA-CZ-5470-01 KIRC 5 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1780 TCGA-CZ-5982-01 KIRC 2 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1781 TCGA-CZ-5984-01 KIRC 22 0 0 1 0 -1 1 0 0 1 1 -1 -1 #> 1782 TCGA-CZ-5985-01 KIRC 6 0 0 0 NA -1 NA 0 0 0 NA 0 NA #> 1783 TCGA-CZ-5986-01 KIRC 6 0 0 0 0 -1 -1 0 0 1 1 0 0 #> 1784 TCGA-CZ-5987-01 KIRC 9 0 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1785 TCGA-CZ-5988-01 KIRC 6 0 0 0 NA -1 0 0 0 0 0 0 0 #> 1786 TCGA-CZ-5989-01 KIRC 3 0 0 0 NA -1 NA 0 0 0 NA 0 0 #> 1787 TCGA-DV-5565-01 KIRC 7 0 0 0 0 -1 NA 0 0 0 0 0 -1 #> 1788 TCGA-DV-5566-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1789 TCGA-DV-5567-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1790 TCGA-DV-5569-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1791 TCGA-DV-5575-01 KIRC 3 0 0 0 0 -1 0 0 0 0 0 0 -1 #> 1792 TCGA-DV-5576-01 KIRC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1793 TCGA-DV-A4VX-01 KIRC 18 0 0 1 1 -1 1 0 0 0 1 0 0 #> 1794 TCGA-DV-A4VZ-01 KIRC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1795 TCGA-DV-A4W0-01 KIRC 6 0 0 0 NA -1 0 0 0 0 1 0 0 #> 1796 TCGA-EU-5904-01 KIRC 0 0 0 0 0 NA 0 0 0 0 NA 0 0 #> 1797 TCGA-EU-5905-01 KIRC 25 -1 -1 0 0 -1 NA -1 -1 1 1 -1 -1 #> 1798 TCGA-EU-5906-01 KIRC 1 0 0 0 0 -1 0 0 0 0 NA 0 0 #> 1799 TCGA-EU-5907-01 KIRC 7 -1 0 0 0 -1 NA -1 -1 1 NA -1 -1 #> 1800 TCGA-G6-A5PC-01 KIRC 2 0 1 0 0 NA 0 0 0 0 NA 0 0 #> 1801 TCGA-G6-A8L6-01 KIRC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 1802 TCGA-G6-A8L7-01 KIRC 10 0 0 0 0 NA 0 -1 0 0 0 -1 -1 #> 1803 TCGA-G6-A8L8-01 KIRC 6 -1 NA 0 0 -1 0 0 0 0 0 0 -1 #> 1804 TCGA-GK-A6C7-01 KIRC 3 NA 0 0 0 -1 NA 0 0 1 1 0 0 #> 1805 TCGA-MM-A563-01 KIRC 8 0 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1806 TCGA-MM-A564-01 KIRC 9 0 1 0 0 -1 -1 0 0 1 1 0 0 #> 1807 TCGA-MM-A84U-01 KIRC 5 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1808 TCGA-MW-A4EC-01 KIRC 4 0 0 0 0 -1 NA 0 0 1 1 0 -1 #> 1809 TCGA-T7-A92I-01 KIRC 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 1810 TCGA-3H-AB3K-01 MESO 4 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 1811 TCGA-3H-AB3L-01 MESO 11 0 0 0 NA 0 0 -1 -1 0 NA 0 -1 #> 1812 TCGA-3H-AB3M-01 MESO 6 -1 0 0 NA NA 0 NA -1 0 0 0 -1 #> 1813 TCGA-3H-AB3S-01 MESO 3 NA 0 0 0 NA 0 0 0 0 0 0 0 #> 1814 TCGA-3H-AB3T-01 MESO 9 NA 0 0 0 0 0 0 -1 0 0 NA NA #> 1815 TCGA-3H-AB3U-01 MESO 19 -1 1 0 0 0 0 -1 -1 0 NA -1 -1 #> 1816 TCGA-3H-AB3X-01 MESO 6 NA 1 0 0 0 0 -1 NA 0 0 0 0 #> 1817 TCGA-3U-A98D-01 MESO 11 NA 0 -1 0 0 -1 -1 -1 0 NA 0 -1 #> 1818 TCGA-3U-A98E-01 MESO 4 0 0 0 0 0 0 0 0 1 1 1 -1 #> 1819 TCGA-3U-A98F-01 MESO 28 -1 1 1 1 -1 -1 -1 -1 0 0 1 NA #> 1820 TCGA-3U-A98G-01 MESO 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1821 TCGA-3U-A98H-01 MESO 3 0 0 0 0 NA 0 0 0 0 0 0 0 #> 1822 TCGA-3U-A98I-01 MESO 9 0 0 0 0 NA -1 -1 -1 NA 0 0 -1 #> 1823 TCGA-3U-A98J-01 MESO 7 NA 1 -1 0 0 0 NA 0 0 0 0 NA #> 1824 TCGA-LK-A4NW-01 MESO 11 0 0 0 0 0 0 0 0 1 0 0 0 #> 1825 TCGA-LK-A4NY-01 MESO 2 NA 0 0 NA 0 0 0 0 0 0 0 NA #> 1826 TCGA-LK-A4NZ-01 MESO 4 0 1 0 0 NA 0 0 0 0 0 0 -1 #> 1827 TCGA-LK-A4O0-01 MESO 17 NA NA 1 1 1 1 0 0 1 1 0 0 #> 1828 TCGA-LK-A4O2-01 MESO 10 NA 0 NA -1 NA 1 0 NA 1 0 0 -1 #> 1829 TCGA-LK-A4O4-01 MESO 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1830 TCGA-LK-A4O5-01 MESO 3 NA 0 0 NA NA 0 0 0 0 0 0 0 #> 1831 TCGA-LK-A4O6-01 MESO 9 -1 1 0 0 NA 1 -1 -1 0 0 0 0 #> 1832 TCGA-LK-A4O7-01 MESO 10 -1 1 0 0 -1 -1 -1 -1 1 NA -1 0 #> 1833 TCGA-MQ-A4KX-01 MESO 3 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1834 TCGA-MQ-A4LC-01 MESO 2 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 1835 TCGA-MQ-A4LI-01 MESO 12 -1 1 0 0 0 0 -1 -1 0 0 0 0 #> 1836 TCGA-MQ-A4LJ-01 MESO 5 NA 1 NA 0 0 0 0 0 0 0 0 0 #> 1837 TCGA-MQ-A4LM-01 MESO 9 NA 0 0 0 NA NA -1 -1 0 0 0 -1 #> 1838 TCGA-MQ-A4LP-01 MESO 8 NA 0 NA 0 -1 0 -1 -1 1 0 0 0 #> 1839 TCGA-MQ-A4LV-01 MESO 3 0 0 0 0 NA 0 NA NA 0 0 0 0 #> 1840 TCGA-MQ-A6BL-01 MESO 6 -1 0 NA 0 NA 0 0 -1 0 0 0 -1 #> 1841 TCGA-MQ-A6BQ-01 MESO 5 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1842 TCGA-MQ-A6BR-01 MESO 5 0 0 0 0 0 0 -1 -1 1 1 0 0 #> 1843 TCGA-MQ-A6BS-01 MESO 21 -1 0 1 1 NA 0 -1 0 0 NA 1 -1 #> 1844 TCGA-NQ-A57I-01 MESO 17 0 0 0 0 -1 -1 1 1 0 0 -1 -1 #> 1845 TCGA-NQ-A638-01 MESO 15 NA 0 0 0 0 0 -1 NA 1 0 -1 -1 #> 1846 TCGA-SC-A6LM-01 MESO 3 NA NA 0 0 NA 0 NA 0 0 NA 0 0 #> 1847 TCGA-SC-A6LN-01 MESO 9 -1 1 0 0 0 0 -1 -1 NA NA 0 0 #> 1848 TCGA-SC-A6LP-01 MESO 3 0 0 0 0 0 0 0 0 1 1 0 0 #> 1849 TCGA-SC-A6LQ-01 MESO 4 0 0 0 NA 0 0 0 0 0 0 0 0 #> 1850 TCGA-SC-A6LR-01 MESO 25 -1 0 -1 -1 NA NA -1 -1 NA 0 1 -1 #> 1851 TCGA-SC-AA5Z-01 MESO 31 -1 -1 -1 -1 NA 1 -1 -1 0 0 0 0 #> 1852 TCGA-SH-A7BC-01 MESO 11 NA NA 0 0 NA 0 -1 -1 0 0 NA -1 #> 1853 TCGA-SH-A7BD-01 MESO 1 NA 0 0 0 NA 0 0 0 0 NA 0 NA #> 1854 TCGA-SH-A7BH-01 MESO 30 NA 1 -1 -1 1 1 -1 -1 1 1 0 0 #> 1855 TCGA-SH-A9CT-01 MESO 8 NA 1 0 0 0 1 0 NA 0 0 0 0 #> 1856 TCGA-SH-A9CU-01 MESO 24 NA 0 -1 1 1 NA NA -1 1 NA 1 NA #> 1857 TCGA-TS-A7OU-01 MESO 2 0 0 0 1 NA 0 0 0 0 0 0 0 #> 1858 TCGA-TS-A7OY-01 MESO 4 0 0 0 0 0 0 0 -1 0 0 0 0 #> 1859 TCGA-TS-A7OZ-01 MESO 5 NA 0 0 0 NA 0 0 -1 0 0 0 0 #> 1860 TCGA-TS-A7P0-01 MESO 16 NA 0 0 0 0 0 -1 -1 NA NA NA -1 #> 1861 TCGA-TS-A7P1-01 MESO 5 NA 0 0 0 0 0 0 NA 1 NA 0 0 #> 1862 TCGA-TS-A7P3-01 MESO 2 NA 0 0 0 NA 0 0 0 0 0 0 0 #> 1863 TCGA-TS-A7P6-01 MESO 8 NA NA -1 -1 0 0 NA -1 NA 0 -1 -1 #> 1864 TCGA-TS-A7P8-01 MESO 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1865 TCGA-TS-A7PB-01 MESO 1 NA 0 0 0 NA 0 0 0 0 0 0 -1 #> 1866 TCGA-TS-A8AI-01 MESO 4 NA 0 NA 0 NA 0 -1 -1 0 NA 0 0 #> 1867 TCGA-TS-A8AS-01 MESO 3 0 0 0 0 0 1 0 0 0 0 0 -1 #> 1868 TCGA-TS-A8AY-01 MESO 7 NA NA NA 0 0 0 0 -1 0 0 NA -1 #> 1869 TCGA-UD-AABZ-01 MESO 9 0 1 0 0 NA 0 0 -1 1 NA 0 NA #> 1870 TCGA-UD-AAC1-01 MESO 4 0 0 0 0 0 0 0 0 1 1 0 0 #> 1871 TCGA-UD-AAC4-01 MESO 3 NA 0 0 0 NA 0 0 0 0 0 NA 0 #> 1872 TCGA-UD-AAC5-01 MESO 11 NA 1 0 0 NA 0 -1 -1 0 0 0 -1 #> 1873 TCGA-UD-AAC6-01 MESO 10 NA 0 0 0 NA 1 -1 0 0 0 1 -1 #> 1874 TCGA-UD-AAC7-01 MESO 7 NA 0 0 0 NA 0 -1 -1 0 0 0 -1 #> 1875 TCGA-UT-A88C-01 MESO 10 0 0 0 0 NA 1 0 0 0 0 0 0 #> 1876 TCGA-UT-A88D-01 MESO 1 NA 0 0 0 0 0 0 0 0 0 0 0 #> 1877 TCGA-UT-A88E-01 MESO 6 NA 0 0 0 NA 0 -1 0 0 0 0 NA #> 1878 TCGA-UT-A88G-01 MESO 28 0 0 -1 0 1 1 -1 -1 0 NA -1 -1 #> 1879 TCGA-UT-A97Y-01 MESO 6 NA 0 0 0 0 0 -1 -1 0 0 0 0 #> 1880 TCGA-XT-AASU-01 MESO 3 NA 0 0 0 NA 0 0 0 0 NA 0 NA #> 1881 TCGA-YS-A95B-01 MESO 6 NA 1 0 0 0 0 0 0 0 0 0 0 #> 1882 TCGA-YS-A95C-01 MESO 8 NA 0 0 0 0 0 0 0 1 1 0 0 #> 1883 TCGA-YS-AA4M-01 MESO 3 0 NA 0 0 0 0 0 0 0 0 0 0 #> 1884 TCGA-ZN-A9VO-01 MESO 7 0 0 0 0 NA 0 0 0 NA 0 0 -1 #> 1885 TCGA-ZN-A9VP-01 MESO 12 NA 0 0 0 -1 0 0 0 1 0 0 0 #> 1886 TCGA-ZN-A9VQ-01 MESO 4 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1887 TCGA-ZN-A9VS-01 MESO 9 0 0 0 0 NA 0 -1 -1 0 0 0 -1 #> 1888 TCGA-ZN-A9VU-01 MESO 5 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1889 TCGA-ZN-A9VV-01 MESO 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 1890 TCGA-ZN-A9VW-01 MESO 5 0 NA 0 0 0 0 0 0 NA 0 0 0 #> 1891 TCGA-2J-AAB1-01 PAAD 2 NA 0 0 0 0 0 0 0 0 0 -1 -1 #> 1892 TCGA-2J-AAB4-01 PAAD 6 0 NA NA 0 0 0 0 0 0 0 NA 0 #> 1893 TCGA-2J-AAB6-01 PAAD 13 1 1 0 0 1 1 1 0 0 0 0 0 #> 1894 TCGA-2J-AAB8-01 PAAD 9 -1 NA 0 0 -1 NA -1 0 0 0 0 0 #> 1895 TCGA-2J-AAB9-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1896 TCGA-2J-AABA-01 PAAD 6 NA 0 0 0 0 0 0 0 0 0 NA -1 #> 1897 TCGA-2J-AABE-01 PAAD 5 NA 1 0 1 0 0 0 0 0 0 0 -1 #> 1898 TCGA-2J-AABF-01 PAAD 9 NA 1 0 NA NA 0 0 0 0 0 0 0 #> 1899 TCGA-2J-AABH-01 PAAD 11 -1 1 0 0 0 0 0 0 0 0 NA -1 #> 1900 TCGA-2J-AABI-01 PAAD 13 -1 0 0 0 -1 0 0 0 0 0 -1 -1 #> 1901 TCGA-2J-AABO-01 PAAD 22 -1 0 0 1 -1 NA -1 -1 -1 -1 -1 -1 #> 1902 TCGA-2J-AABP-01 PAAD 18 0 -1 -1 NA 0 -1 1 NA 1 -1 NA 0 #> 1903 TCGA-2J-AABT-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 0 0 #> 1904 TCGA-2J-AABU-01 PAAD 8 0 0 NA 0 -1 0 0 0 NA 0 -1 -1 #> 1905 TCGA-2J-AABV-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1906 TCGA-2L-AAQA-01 PAAD 5 -1 1 0 0 0 0 0 NA 0 0 NA -1 #> 1907 TCGA-2L-AAQE-01 PAAD 27 0 0 1 1 1 1 0 0 1 1 -1 -1 #> 1908 TCGA-2L-AAQI-01 PAAD 9 -1 0 0 0 0 0 0 0 -1 NA NA -1 #> 1909 TCGA-2L-AAQJ-01 PAAD 6 -1 0 0 0 -1 0 0 0 0 0 0 0 #> 1910 TCGA-2L-AAQL-01 PAAD 21 -1 1 0 0 -1 0 -1 -1 -1 -1 -1 -1 #> 1911 TCGA-2L-AAQM-01 PAAD 38 -1 -1 -1 NA -1 -1 1 1 1 1 -1 -1 #> 1912 TCGA-3A-A9I5-01 PAAD 4 -1 1 0 0 -1 0 NA NA 0 0 0 0 #> 1913 TCGA-3A-A9I7-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1914 TCGA-3A-A9I9-01 PAAD 5 0 0 NA 0 0 0 0 NA 0 NA 0 -1 #> 1915 TCGA-3A-A9IB-01 PAAD 10 0 0 0 0 NA 1 -1 NA 0 0 0 0 #> 1916 TCGA-3A-A9IC-01 PAAD 12 0 1 0 0 -1 0 -1 0 0 NA 0 0 #> 1917 TCGA-3A-A9IH-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1918 TCGA-3A-A9IJ-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1919 TCGA-3A-A9IL-01 PAAD 24 -1 -1 -1 NA 0 0 0 0 1 1 -1 -1 #> 1920 TCGA-3A-A9IN-01 PAAD 18 0 0 0 0 0 0 1 1 1 1 0 0 #> 1921 TCGA-3A-A9IO-01 PAAD 20 0 0 0 0 -1 -1 0 0 1 1 1 1 #> 1922 TCGA-3A-A9IR-01 PAAD 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 1923 TCGA-3A-A9IS-01 PAAD 24 -1 -1 -1 NA 0 -1 1 1 1 1 -1 -1 #> 1924 TCGA-3A-A9IU-01 PAAD 9 0 1 0 0 0 0 0 0 0 0 0 -1 #> 1925 TCGA-3A-A9IV-01 PAAD 32 -1 -1 -1 NA -1 -1 1 1 1 0 -1 -1 #> 1926 TCGA-3A-A9IX-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1927 TCGA-3A-A9IZ-01 PAAD 6 0 NA 0 0 0 NA 0 0 0 NA 0 -1 #> 1928 TCGA-3A-A9J0-01 PAAD 24 0 NA 1 1 1 1 0 0 0 0 0 0 #> 1929 TCGA-3E-AAAZ-01 PAAD 9 -1 1 0 0 0 0 -1 -1 0 0 -1 -1 #> 1930 TCGA-F2-6879-01 PAAD 9 0 0 0 0 0 0 0 0 0 0 NA -1 #> 1931 TCGA-F2-6880-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1932 TCGA-F2-7273-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1933 TCGA-F2-7276-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1934 TCGA-F2-A44G-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 1935 TCGA-F2-A44H-01 PAAD 10 NA 1 0 0 -1 0 0 0 0 0 0 -1 #> 1936 TCGA-F2-A7TX-01 PAAD 9 0 0 0 0 NA NA 0 0 0 0 -1 0 #> 1937 TCGA-F2-A8YN-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 NA NA #> 1938 TCGA-FB-A4P5-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1939 TCGA-FB-A545-01 PAAD 25 0 0 1 1 0 0 0 0 -1 -1 NA -1 #> 1940 TCGA-FB-A5VM-01 PAAD 8 0 0 0 0 NA 1 0 NA 1 -1 0 0 #> 1941 TCGA-FB-A78T-01 PAAD 8 -1 1 0 0 0 0 0 0 0 0 0 0 #> 1942 TCGA-FB-A7DR-01 PAAD 15 0 1 0 1 NA 1 0 0 1 NA NA 0 #> 1943 TCGA-FB-AAPP-01 PAAD 19 -1 0 0 0 -1 -1 0 0 0 0 -1 -1 #> 1944 TCGA-FB-AAPQ-01 PAAD 5 -1 NA NA NA -1 0 0 0 0 0 NA 0 #> 1945 TCGA-FB-AAPS-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1946 TCGA-FB-AAPU-01 PAAD 4 NA 1 0 NA 0 0 0 0 0 NA 0 0 #> 1947 TCGA-FB-AAPY-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 1948 TCGA-FB-AAPZ-01 PAAD 21 0 0 1 1 NA 1 0 0 1 NA 1 -1 #> 1949 TCGA-FB-AAQ0-01 PAAD 6 0 0 0 0 0 0 0 0 0 0 0 0 #> 1950 TCGA-FB-AAQ1-01 PAAD 26 1 1 -1 0 -1 1 -1 NA 1 1 0 -1 #> 1951 TCGA-FB-AAQ2-01 PAAD 16 0 0 0 0 0 0 -1 -1 0 0 -1 -1 #> 1952 TCGA-FB-AAQ3-01 PAAD 4 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 1953 TCGA-FB-AAQ6-01 PAAD 7 -1 1 0 0 -1 0 0 0 0 0 0 -1 #> 1954 TCGA-FZ-5919-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1955 TCGA-FZ-5920-01 PAAD 19 -1 1 0 0 0 -1 -1 -1 0 0 -1 -1 #> 1956 TCGA-FZ-5921-01 PAAD 13 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1957 TCGA-FZ-5922-01 PAAD 3 NA 0 0 0 NA 0 0 0 0 0 0 -1 #> 1958 TCGA-FZ-5923-01 PAAD 3 NA NA 0 0 0 0 0 0 0 0 0 0 #> 1959 TCGA-FZ-5924-01 PAAD 33 -1 1 1 1 -1 1 1 1 1 NA 0 -1 #> 1960 TCGA-FZ-5926-01 PAAD 16 0 0 NA 0 0 0 0 0 -1 -1 0 0 #> 1961 TCGA-H6-8124-01 PAAD 11 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1962 TCGA-H6-A45N-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1963 TCGA-H8-A6C1-01 PAAD 6 0 1 NA 0 NA NA NA NA 0 0 NA 0 #> 1964 TCGA-HV-A5A3-01 PAAD 11 0 1 0 NA 0 1 0 0 0 0 NA -1 #> 1965 TCGA-HV-A5A4-01 PAAD 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 1966 TCGA-HV-A5A6-01 PAAD 17 0 0 0 0 0 0 0 -1 1 -1 -1 0 #> 1967 TCGA-HV-A7OL-01 PAAD 7 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1968 TCGA-HV-A7OP-01 PAAD 18 -1 1 0 0 0 0 -1 -1 1 -1 0 0 #> 1969 TCGA-HV-AA8X-01 PAAD 6 0 1 0 NA -1 0 0 0 0 0 0 -1 #> 1970 TCGA-HZ-7289-01 PAAD 20 -1 0 -1 NA 0 0 0 0 1 -1 -1 -1 #> 1971 TCGA-HZ-7918-01 PAAD 6 NA 0 0 NA 0 NA -1 NA 0 NA NA NA #> 1972 TCGA-HZ-7919-01 PAAD 7 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1973 TCGA-HZ-7920-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1974 TCGA-HZ-7922-01 PAAD 25 0 0 0 0 -1 1 1 -1 1 -1 -1 -1 #> 1975 TCGA-HZ-7924-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1976 TCGA-HZ-7925-01 PAAD 9 0 0 0 0 -1 -1 -1 -1 0 0 NA -1 #> 1977 TCGA-HZ-8002-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1978 TCGA-HZ-8005-01 PAAD 22 -1 -1 0 0 -1 1 0 0 0 0 1 -1 #> 1979 TCGA-HZ-8315-01 PAAD 5 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 1980 TCGA-HZ-8317-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1981 TCGA-HZ-8519-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1982 TCGA-HZ-8636-01 PAAD 10 0 NA 0 0 0 0 NA 0 0 0 0 0 #> 1983 TCGA-HZ-8637-01 PAAD 8 0 1 0 NA -1 0 0 -1 0 NA 0 0 #> 1984 TCGA-HZ-8638-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1985 TCGA-HZ-A49G-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1986 TCGA-HZ-A49H-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1987 TCGA-HZ-A49I-01 PAAD 5 0 0 -1 0 0 0 NA 0 0 0 NA 0 #> 1988 TCGA-HZ-A4BH-01 PAAD 7 0 NA 0 0 0 0 0 -1 0 0 0 0 #> 1989 TCGA-HZ-A4BK-01 PAAD 23 1 1 1 1 -1 1 0 0 0 1 -1 1 #> 1990 TCGA-HZ-A77O-01 PAAD 32 -1 1 1 1 0 0 1 1 -1 NA NA -1 #> 1991 TCGA-HZ-A77P-01 PAAD 4 0 0 NA 1 0 0 0 0 0 0 0 0 #> 1992 TCGA-HZ-A77Q-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 NA -1 #> 1993 TCGA-HZ-A8P0-01 PAAD 3 0 1 0 0 0 0 0 0 0 0 0 0 #> 1994 TCGA-HZ-A8P1-01 PAAD 6 -1 1 0 0 -1 -1 0 0 0 0 0 0 #> 1995 TCGA-HZ-A9TJ-01 PAAD 19 1 1 1 1 1 NA NA 0 0 0 1 1 #> 1996 TCGA-HZ-A9TJ-06 PAAD 17 NA 1 1 1 0 1 -1 -1 -1 -1 0 0 #> 1997 TCGA-IB-7644-01 PAAD 6 0 0 0 0 0 0 0 0 0 0 0 -1 #> 1998 TCGA-IB-7645-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 1999 TCGA-IB-7646-01 PAAD 24 -1 1 -1 1 NA 1 0 0 0 0 -1 -1 #> 2000 TCGA-IB-7647-01 PAAD 9 0 0 0 0 -1 0 0 0 0 0 NA -1 #> 2001 TCGA-IB-7649-01 PAAD 12 -1 NA 0 0 0 0 0 0 0 0 0 0 #> 2002 TCGA-IB-7651-01 PAAD 2 0 0 1 1 0 0 0 0 0 0 0 0 #> 2003 TCGA-IB-7652-01 PAAD 6 0 0 -1 NA NA 0 0 NA 0 NA 0 0 #> 2004 TCGA-IB-7885-01 PAAD 8 0 0 0 0 0 0 0 0 0 0 0 -1 #> 2005 TCGA-IB-7886-01 PAAD 20 -1 0 0 0 -1 -1 -1 -1 0 0 -1 -1 #> 2006 TCGA-IB-7887-01 PAAD 8 0 0 NA 0 -1 NA -1 0 0 0 NA -1 #> 2007 TCGA-IB-7888-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2008 TCGA-IB-7889-01 PAAD 5 0 1 0 0 0 0 NA 0 0 0 0 0 #> 2009 TCGA-IB-7890-01 PAAD 19 -1 -1 NA 0 -1 1 0 0 0 0 -1 -1 #> 2010 TCGA-IB-7891-01 PAAD 4 0 0 1 1 0 0 0 0 0 0 0 0 #> 2011 TCGA-IB-7893-01 PAAD 26 0 1 1 1 1 1 0 0 0 NA -1 -1 #> 2012 TCGA-IB-7897-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2013 TCGA-IB-8126-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2014 TCGA-IB-8127-01 PAAD 26 -1 1 1 1 0 0 0 1 -1 NA NA NA #> 2015 TCGA-IB-A5SO-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2016 TCGA-IB-A5SP-01 PAAD 11 0 0 0 0 0 0 -1 -1 0 0 -1 -1 #> 2017 TCGA-IB-A5SQ-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2018 TCGA-IB-A5SS-01 PAAD 7 NA 0 0 0 0 0 0 0 0 0 -1 -1 #> 2019 TCGA-IB-A5ST-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2020 TCGA-IB-A6UF-01 PAAD 13 0 1 0 0 0 0 0 0 0 0 -1 -1 #> 2021 TCGA-IB-A6UG-01 PAAD 21 -1 1 0 0 1 1 NA 0 1 -1 -1 -1 #> 2022 TCGA-IB-A7LX-01 PAAD 13 -1 0 0 0 -1 -1 NA 0 0 -1 0 -1 #> 2023 TCGA-IB-A7M4-01 PAAD 7 0 0 0 0 0 0 0 0 0 0 0 0 #> 2024 TCGA-IB-AAUM-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2025 TCGA-IB-AAUN-01 PAAD 9 -1 0 0 0 0 0 0 0 0 0 NA -1 #> 2026 TCGA-IB-AAUO-01 PAAD 8 0 0 0 0 NA 1 -1 -1 0 0 -1 -1 #> 2027 TCGA-IB-AAUP-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2028 TCGA-IB-AAUQ-01 PAAD 8 0 0 0 0 0 0 -1 -1 0 0 0 0 #> 2029 TCGA-IB-AAUR-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2030 TCGA-IB-AAUS-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2031 TCGA-IB-AAUT-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2032 TCGA-IB-AAUU-01 PAAD 23 0 1 1 1 NA 0 1 0 NA 0 -1 0 #> 2033 TCGA-LB-A7SX-01 PAAD 14 0 0 0 0 -1 0 0 0 0 -1 -1 -1 #> 2034 TCGA-LB-A8F3-01 PAAD 23 -1 1 0 0 -1 -1 0 0 0 0 1 1 #> 2035 TCGA-M8-A5N4-01 PAAD 22 1 1 NA NA NA 1 0 0 1 NA NA NA #> 2036 TCGA-OE-A75W-01 PAAD 8 NA 0 NA 0 0 0 0 -1 0 0 0 -1 #> 2037 TCGA-PZ-A5RE-01 PAAD 9 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 2038 TCGA-Q3-A5QY-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2039 TCGA-Q3-AA2A-01 PAAD 4 NA 0 0 0 0 0 0 0 0 0 NA 0 #> 2040 TCGA-RB-A7B8-01 PAAD 5 NA 1 0 0 0 1 0 0 0 0 0 0 #> 2041 TCGA-S4-A8RM-01 PAAD 7 -1 1 0 0 0 0 0 0 0 0 NA -1 #> 2042 TCGA-S4-A8RO-01 PAAD 6 -1 NA NA NA 0 0 0 0 0 0 0 0 #> 2043 TCGA-S4-A8RP-01 PAAD 5 NA 1 0 0 0 0 0 0 NA NA 0 -1 #> 2044 TCGA-US-A774-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2045 TCGA-US-A776-01 PAAD 4 0 0 0 0 0 0 0 0 0 0 0 0 #> 2046 TCGA-US-A779-01 PAAD 6 0 0 0 0 0 0 0 0 -1 -1 -1 -1 #> 2047 TCGA-US-A77E-01 PAAD 5 0 0 0 0 0 0 0 0 0 0 0 0 #> 2048 TCGA-US-A77G-01 PAAD 5 0 0 0 0 0 0 0 0 0 0 NA -1 #> 2049 TCGA-XD-AAUG-01 PAAD 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2050 TCGA-XD-AAUI-01 PAAD 7 0 NA 0 0 0 0 NA -1 -1 -1 0 0 #> 2051 TCGA-XD-AAUL-01 PAAD 4 0 0 0 0 0 0 0 0 0 NA 0 0 #> 2052 TCGA-XN-A8T3-01 PAAD 25 0 0 0 0 0 0 0 0 -1 -1 NA -1 #> 2053 TCGA-XN-A8T5-01 PAAD 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2054 TCGA-YB-A89D-01 PAAD 21 0 0 1 1 0 0 1 1 0 0 -1 -1 #> 2055 TCGA-YH-A8SY-01 PAAD 7 0 0 NA 0 NA 0 0 0 NA 0 NA -1 #> 2056 TCGA-YY-A8LH-01 PAAD 8 -1 1 0 0 0 0 0 0 0 0 NA -1 #> 2057 TCGA-2W-A8YY-01 CESC 0 0 0 0 0 0 0 0 NA 0 NA 0 0 #> 2058 TCGA-4J-AA1J-01 CESC 6 0 0 0 0 NA 0 0 NA 1 -1 NA -1 #> 2059 TCGA-BI-A0VR-01 CESC 9 1 1 0 0 -1 1 -1 NA 0 0 1 0 #> 2060 TCGA-BI-A0VS-01 CESC 24 NA -1 0 NA -1 NA -1 -1 1 -1 0 -1 #> 2061 TCGA-BI-A20A-01 CESC 18 0 0 1 NA -1 1 0 NA 0 0 NA -1 #> 2062 TCGA-C5-A0TN-01 CESC 11 0 0 0 NA -1 NA -1 -1 1 -1 NA 0 #> 2063 TCGA-C5-A1BE-01 CESC 4 0 0 0 0 0 NA -1 0 NA NA 0 0 #> 2064 TCGA-C5-A1BF-01 CESC 4 NA 1 0 NA -1 0 0 0 0 NA 0 0 #> 2065 TCGA-C5-A1BI-01 CESC 3 0 0 0 NA -1 NA -1 0 0 0 0 -1 #> 2066 TCGA-C5-A1BJ-01 CESC 7 0 0 0 0 NA 1 -1 0 1 -1 0 0 #> 2067 TCGA-C5-A1BK-01 CESC 6 0 1 0 NA 0 1 -1 0 0 NA 0 0 #> 2068 TCGA-C5-A1BL-01 CESC 13 0 1 0 0 -1 1 -1 0 NA NA 0 -1 #> 2069 TCGA-C5-A1BM-01 CESC 9 1 1 0 0 -1 1 0 0 0 0 NA -1 #> 2070 TCGA-C5-A1BN-01 CESC 8 0 1 1 0 -1 0 -1 -1 0 -1 1 NA #> 2071 TCGA-C5-A1BQ-01 CESC 6 0 0 0 0 0 0 0 0 1 0 NA 0 #> 2072 TCGA-C5-A1M5-01 CESC 3 0 0 0 0 0 1 0 0 0 0 0 NA #> 2073 TCGA-C5-A1M6-01 CESC 23 0 0 1 0 -1 1 -1 -1 1 -1 0 0 #> 2074 TCGA-C5-A1M7-01 CESC 11 1 1 0 0 1 1 0 0 1 0 1 1 #> 2075 TCGA-C5-A1M8-01 CESC 8 0 0 0 -1 -1 NA 0 0 0 NA -1 -1 #> 2076 TCGA-C5-A1M9-01 CESC 14 0 0 0 0 0 0 0 0 -1 -1 0 0 #> 2077 TCGA-C5-A1ME-01 CESC 14 0 0 1 0 0 NA 0 0 1 0 0 0 #> 2078 TCGA-C5-A1MF-01 CESC 9 0 1 NA 0 NA 1 -1 0 0 0 0 0 #> 2079 TCGA-C5-A1MH-01 CESC 24 1 NA -1 -1 0 1 -1 -1 -1 -1 0 0 #> 2080 TCGA-C5-A1MI-01 CESC 25 -1 1 0 0 -1 0 -1 -1 -1 -1 1 1 #> 2081 TCGA-C5-A1MJ-01 CESC 21 NA 1 0 0 1 1 0 0 0 0 0 0 #> 2082 TCGA-C5-A1MK-01 CESC 9 1 1 0 0 0 1 NA 0 0 0 0 0 #> 2083 TCGA-C5-A1ML-01 CESC 22 1 1 0 0 -1 NA -1 -1 1 1 1 1 #> 2084 TCGA-C5-A1MN-01 CESC 16 0 0 0 0 -1 NA 0 NA 1 -1 0 0 #> 2085 TCGA-C5-A1MP-01 CESC 12 0 1 0 0 0 1 -1 1 1 0 0 0 #> 2086 TCGA-C5-A2LS-01 CESC 4 0 1 0 0 0 1 0 0 0 0 0 0 #> 2087 TCGA-C5-A2LT-01 CESC 27 -1 -1 1 -1 0 1 -1 -1 1 0 -1 -1 #> 2088 TCGA-C5-A2LV-01 CESC 14 0 NA 0 0 NA NA -1 -1 0 0 NA -1 #> 2089 TCGA-C5-A2LX-01 CESC 14 0 NA 0 0 NA 1 -1 -1 NA 0 0 0 #> 2090 TCGA-C5-A2LY-01 CESC 7 0 1 0 1 0 NA 0 0 0 0 NA 0 #> 2091 TCGA-C5-A2LZ-01 CESC 9 0 1 0 NA 0 1 -1 0 1 0 0 0 #> 2092 TCGA-C5-A2M1-01 CESC 5 0 0 0 0 0 0 0 0 1 0 0 0 #> 2093 TCGA-C5-A2M2-01 CESC 1 0 0 NA NA 0 NA 0 0 0 0 0 0 #> 2094 TCGA-C5-A3HD-01 CESC 1 0 0 0 NA 0 0 NA NA 1 NA NA NA #> 2095 TCGA-C5-A3HE-01 CESC 13 0 0 -1 -1 0 NA -1 -1 1 -1 0 0 #> 2096 TCGA-C5-A3HF-01 CESC 3 0 0 0 0 0 NA 0 0 0 0 1 -1 #> 2097 TCGA-C5-A3HL-01 CESC 0 0 NA 0 0 0 NA 0 0 0 0 0 0 #> 2098 TCGA-C5-A7CG-01 CESC 16 0 0 -1 -1 0 NA 0 0 0 0 NA NA #> 2099 TCGA-C5-A7CH-01 CESC 21 NA 1 -1 -1 -1 NA -1 -1 -1 -1 1 -1 #> 2100 TCGA-C5-A7CJ-01 CESC 4 1 1 0 0 -1 1 0 0 0 0 0 0 #> 2101 TCGA-C5-A7CK-01 CESC 9 0 1 0 0 NA 1 -1 NA 0 0 0 0 #> 2102 TCGA-C5-A7CL-01 CESC 9 0 1 0 0 -1 1 -1 -1 1 0 0 0 #> 2103 TCGA-C5-A7CM-01 CESC 11 0 0 0 0 0 NA -1 -1 1 0 0 0 #> 2104 TCGA-C5-A7CO-01 CESC 19 0 0 0 0 -1 NA -1 -1 1 1 -1 -1 #> 2105 TCGA-C5-A7UC-01 CESC 6 0 0 0 0 0 0 0 0 0 -1 0 0 #> 2106 TCGA-C5-A7UE-01 CESC 7 0 0 0 0 -1 1 0 0 1 NA 1 1 #> 2107 TCGA-C5-A7UH-01 CESC 23 -1 -1 1 NA NA NA -1 -1 1 0 1 -1 #> 2108 TCGA-C5-A7UI-01 CESC 9 NA 1 0 0 -1 1 -1 0 0 0 1 NA #> 2109 TCGA-C5-A7X3-01 CESC 20 -1 0 1 -1 0 0 -1 -1 1 -1 -1 -1 #> 2110 TCGA-C5-A7X5-01 CESC 16 NA 0 1 0 -1 1 0 -1 0 1 0 0 #> 2111 TCGA-C5-A7X8-01 CESC 29 1 1 1 1 -1 1 -1 -1 1 1 1 1 #> 2112 TCGA-C5-A7XC-01 CESC 7 NA 0 1 NA 0 1 0 1 0 1 0 -1 #> 2113 TCGA-C5-A8XH-01 CESC 10 NA 1 NA NA NA NA -1 NA 1 -1 NA NA #> 2114 TCGA-C5-A8XI-01 CESC 11 0 1 0 NA 1 1 1 1 0 0 0 0 #> 2115 TCGA-C5-A8XJ-01 CESC 7 0 0 0 0 -1 0 0 0 1 0 0 0 #> 2116 TCGA-C5-A8XK-01 CESC 5 0 0 0 NA 0 0 -1 NA 1 0 0 NA #> 2117 TCGA-C5-A8YQ-01 CESC 20 NA 1 1 0 -1 1 -1 0 0 0 -1 -1 #> 2118 TCGA-C5-A8YR-01 CESC 20 1 1 NA -1 0 0 0 -1 1 0 -1 -1 #> 2119 TCGA-C5-A8YT-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2120 TCGA-C5-A8ZZ-01 CESC 7 0 0 0 0 -1 1 -1 -1 0 0 0 0 #> 2121 TCGA-C5-A907-01 CESC 5 0 0 0 0 0 0 0 0 1 0 0 0 #> 2122 TCGA-DG-A2KH-01 CESC 19 NA 1 1 -1 1 1 0 0 1 1 -1 -1 #> 2123 TCGA-DG-A2KJ-01 CESC 12 NA 0 0 0 -1 1 -1 -1 0 0 NA NA #> 2124 TCGA-DG-A2KK-01 CESC 5 0 0 0 0 0 1 0 0 0 0 NA 0 #> 2125 TCGA-DG-A2KL-01 CESC 18 1 1 1 NA 0 1 0 0 1 1 NA -1 #> 2126 TCGA-DG-A2KM-01 CESC 12 -1 -1 0 0 -1 1 -1 -1 0 0 0 0 #> 2127 TCGA-DR-A0ZL-01 CESC 11 0 1 0 NA -1 1 -1 -1 0 -1 0 0 #> 2128 TCGA-DR-A0ZM-01 CESC 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 2129 TCGA-DS-A0VK-01 CESC 7 0 0 0 0 -1 1 -1 0 0 -1 NA 0 #> 2130 TCGA-DS-A0VL-01 CESC 3 0 0 0 NA 0 NA -1 0 0 0 0 0 #> 2131 TCGA-DS-A0VM-01 CESC 3 0 1 0 0 NA 1 0 NA NA -1 NA NA #> 2132 TCGA-DS-A0VN-01 CESC 18 NA -1 -1 -1 -1 1 -1 NA 0 0 0 0 #> 2133 TCGA-DS-A3LQ-01 CESC 22 -1 NA 0 NA -1 1 -1 -1 0 -1 -1 -1 #> 2134 TCGA-DS-A5RQ-01 CESC 3 0 0 0 0 -1 1 -1 NA 0 0 0 0 #> 2135 TCGA-DS-A7WF-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2136 TCGA-DS-A7WH-01 CESC 5 0 1 1 0 NA 1 0 0 0 0 NA 0 #> 2137 TCGA-DS-A7WI-01 CESC 5 NA 1 0 NA 0 1 0 0 0 0 0 0 #> 2138 TCGA-EA-A1QS-01 CESC 9 1 0 NA NA 0 1 NA 0 1 0 NA 1 #> 2139 TCGA-EA-A1QT-01 CESC 8 0 0 0 NA NA 1 0 0 0 -1 0 -1 #> 2140 TCGA-EA-A3HQ-01 CESC 10 1 1 0 0 0 1 0 0 0 0 0 0 #> 2141 TCGA-EA-A3HR-01 CESC 8 NA 0 0 -1 0 1 -1 0 1 0 0 0 #> 2142 TCGA-EA-A3HS-01 CESC 5 0 NA 0 0 -1 1 -1 NA 0 0 0 0 #> 2143 TCGA-EA-A3HT-01 CESC 4 1 1 0 0 0 1 0 NA 0 0 0 0 #> 2144 TCGA-EA-A3QD-01 CESC 5 0 0 0 0 -1 1 0 0 0 0 0 0 #> 2145 TCGA-EA-A3QE-01 CESC 4 NA 0 0 NA -1 0 0 NA 0 0 -1 -1 #> 2146 TCGA-EA-A3Y4-01 CESC 4 0 0 0 0 0 0 -1 0 1 0 0 0 #> 2147 TCGA-EA-A410-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2148 TCGA-EA-A411-01 CESC 21 1 1 1 -1 -1 1 -1 NA 0 -1 0 0 #> 2149 TCGA-EA-A439-01 CESC 23 0 0 0 0 -1 1 -1 -1 1 -1 0 NA #> 2150 TCGA-EA-A43B-01 CESC 21 0 0 1 NA 0 0 -1 -1 1 -1 1 -1 #> 2151 TCGA-EA-A44S-01 CESC 8 0 0 0 -1 -1 NA -1 0 0 0 -1 -1 #> 2152 TCGA-EA-A4BA-01 CESC 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2153 TCGA-EA-A50E-01 CESC 6 0 0 0 NA -1 1 0 0 0 0 0 0 #> 2154 TCGA-EA-A556-01 CESC 8 NA 0 1 0 NA NA 0 -1 1 -1 0 NA #> 2155 TCGA-EA-A5FO-01 CESC 3 0 0 0 0 0 1 0 0 0 0 0 0 #> 2156 TCGA-EA-A5O9-01 CESC 21 0 NA NA -1 -1 1 -1 -1 1 0 NA -1 #> 2157 TCGA-EA-A5ZD-01 CESC 3 1 1 0 0 0 1 0 0 0 0 0 0 #> 2158 TCGA-EA-A5ZE-01 CESC 6 0 1 0 0 -1 1 0 0 0 0 0 0 #> 2159 TCGA-EA-A5ZF-01 CESC 29 0 1 0 0 -1 1 -1 -1 1 -1 1 -1 #> 2160 TCGA-EA-A6QX-01 CESC 7 0 1 0 NA -1 0 0 NA 0 0 -1 -1 #> 2161 TCGA-EA-A78R-01 CESC 3 0 1 0 NA 0 NA 0 NA NA 0 0 0 #> 2162 TCGA-EA-A97N-01 CESC 22 0 1 -1 -1 -1 1 -1 -1 NA -1 1 0 #> 2163 TCGA-EK-A2GZ-01 CESC 10 0 1 1 1 -1 1 0 0 0 0 NA -1 #> 2164 TCGA-EK-A2H0-01 CESC 5 0 0 0 NA NA 0 0 NA NA 0 0 0 #> 2165 TCGA-EK-A2H1-01 CESC 7 0 0 1 NA 0 NA 0 0 0 0 0 0 #> 2166 TCGA-EK-A2IP-01 CESC 2 0 0 0 0 -1 0 0 0 0 -1 0 0 #> 2167 TCGA-EK-A2PG-01 CESC 24 NA 0 0 -1 -1 1 -1 -1 0 1 NA -1 #> 2168 TCGA-EK-A2PI-01 CESC 11 0 1 0 NA -1 1 NA 0 NA NA NA 0 #> 2169 TCGA-EK-A2PK-01 CESC 16 NA 1 0 0 0 0 -1 -1 1 0 1 -1 #> 2170 TCGA-EK-A2PL-01 CESC 8 NA 0 0 0 -1 0 0 0 1 -1 NA NA #> 2171 TCGA-EK-A2PM-01 CESC 22 NA 1 NA NA 1 1 -1 -1 1 NA 1 NA #> 2172 TCGA-EK-A2R7-01 CESC 10 1 1 0 0 -1 1 -1 -1 1 0 0 0 #> 2173 TCGA-EK-A2R8-01 CESC 11 0 0 -1 -1 0 NA -1 -1 0 0 0 0 #> 2174 TCGA-EK-A2R9-01 CESC 8 0 0 0 0 0 1 0 0 0 0 0 0 #> 2175 TCGA-EK-A2RA-01 CESC 33 1 NA 1 -1 1 1 -1 -1 1 -1 0 0 #> 2176 TCGA-EK-A2RB-01 CESC 5 0 0 0 0 -1 1 0 0 0 0 0 -1 #> 2177 TCGA-EK-A2RC-01 CESC 5 0 0 0 0 -1 1 0 0 0 0 -1 -1 #> 2178 TCGA-EK-A2RD-01 CESC 6 0 0 0 NA 0 NA -1 0 0 0 0 0 #> 2179 TCGA-EK-A2RE-01 CESC 5 0 0 0 0 -1 0 0 0 0 0 0 0 #> 2180 TCGA-EK-A2RJ-01 CESC 28 NA 0 1 -1 -1 -1 -1 -1 1 -1 NA -1 #> 2181 TCGA-EK-A2RK-01 CESC 17 0 0 0 0 0 0 -1 -1 1 -1 0 NA #> 2182 TCGA-EK-A2RL-01 CESC 3 0 NA 0 0 0 1 0 0 0 0 0 0 #> 2183 TCGA-EK-A2RM-01 CESC 20 NA 1 NA NA NA 1 -1 -1 0 -1 0 -1 #> 2184 TCGA-EK-A2RN-01 CESC 20 1 1 -1 -1 0 1 -1 -1 1 1 -1 -1 #> 2185 TCGA-EK-A2RO-01 CESC 7 NA 0 0 0 0 1 0 0 0 0 0 0 #> 2186 TCGA-EK-A3GJ-01 CESC 6 0 0 1 0 0 0 0 0 0 0 NA -1 #> 2187 TCGA-EK-A3GK-01 CESC 6 0 1 0 NA 0 0 -1 NA 1 -1 0 0 #> 2188 TCGA-EK-A3GM-01 CESC 18 -1 1 0 1 NA 1 0 -1 1 0 0 NA #> 2189 TCGA-EK-A3GN-01 CESC 6 NA 1 0 0 0 1 0 0 1 NA 0 0 #> 2190 TCGA-EX-A1H5-01 CESC 14 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 2191 TCGA-EX-A1H6-01 CESC 4 0 0 NA NA 0 0 0 0 0 0 -1 NA #> 2192 TCGA-EX-A3L1-01 CESC 16 -1 1 0 NA -1 1 -1 -1 1 -1 NA 0 #> 2193 TCGA-EX-A69L-01 CESC 7 0 1 0 -1 0 1 0 0 1 1 0 0 #> 2194 TCGA-EX-A69M-01 CESC 8 0 1 0 0 0 NA 0 0 0 0 NA 0 #> 2195 TCGA-EX-A8YF-01 CESC 13 0 1 0 0 0 0 NA NA 1 1 0 0 #> 2196 TCGA-FU-A23K-01 CESC 6 0 0 0 0 0 0 1 1 0 0 NA 0 #> 2197 TCGA-FU-A23L-01 CESC 23 0 1 1 0 -1 1 -1 0 1 -1 1 -1 #> 2198 TCGA-FU-A2QG-01 CESC 5 0 0 NA NA 0 0 0 0 0 -1 0 0 #> 2199 TCGA-FU-A3EO-01 CESC 4 NA 1 0 0 0 0 0 0 0 0 0 0 #> 2200 TCGA-FU-A3HY-01 CESC 9 0 0 1 NA -1 0 -1 0 1 -1 -1 -1 #> 2201 TCGA-FU-A3HZ-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2202 TCGA-FU-A3NI-01 CESC 22 NA 1 0 NA -1 1 -1 -1 1 NA 0 NA #> 2203 TCGA-FU-A3TQ-01 CESC 5 NA 0 0 0 0 0 0 0 0 0 0 0 #> 2204 TCGA-FU-A3TX-01 CESC 10 NA 0 0 0 1 1 0 0 0 0 0 0 #> 2205 TCGA-FU-A3WB-01 CESC 3 0 0 0 NA 0 1 0 0 0 0 0 0 #> 2206 TCGA-FU-A3YQ-01 CESC 4 0 0 0 0 -1 1 0 0 0 0 0 NA #> 2207 TCGA-FU-A40J-01 CESC 18 1 1 NA 1 0 1 0 0 0 0 0 -1 #> 2208 TCGA-FU-A57G-01 CESC 4 0 0 0 0 0 0 0 0 0 0 1 -1 #> 2209 TCGA-FU-A5XV-01 CESC 6 0 0 0 0 -1 1 -1 -1 1 -1 0 0 #> 2210 TCGA-FU-A770-01 CESC 2 0 0 0 NA 0 0 0 0 0 0 0 0 #> 2211 TCGA-GH-A9DA-01 CESC 12 0 0 0 0 1 1 -1 -1 1 1 0 0 #> 2212 TCGA-HG-A2PA-01 CESC 7 0 1 0 0 -1 1 0 0 1 -1 NA 0 #> 2213 TCGA-HG-A9SC-01 CESC 9 0 1 0 NA NA 1 -1 NA 1 NA 0 0 #> 2214 TCGA-HM-A3JJ-01 CESC 17 0 -1 0 NA -1 0 -1 -1 1 -1 0 0 #> 2215 TCGA-HM-A3JK-01 CESC 13 1 1 0 0 1 1 0 0 0 0 0 NA #> 2216 TCGA-HM-A4S6-01 CESC 2 NA 1 0 0 0 NA 0 0 0 0 0 0 #> 2217 TCGA-HM-A6W2-01 CESC 5 0 1 0 0 0 0 0 0 0 0 0 0 #> 2218 TCGA-HM-A6W2-06 CESC 6 0 1 NA 0 0 1 1 0 -1 -1 0 0 #> 2219 TCGA-IR-A3L7-01 CESC 1 0 0 0 0 -1 0 0 0 0 0 0 0 #> 2220 TCGA-IR-A3LA-01 CESC 3 0 0 NA 0 0 NA 0 NA 0 0 0 NA #> 2221 TCGA-IR-A3LB-01 CESC 6 0 0 0 0 0 0 0 0 0 0 0 0 #> 2222 TCGA-IR-A3LC-01 CESC 4 1 1 1 0 0 1 0 0 0 0 0 NA #> 2223 TCGA-IR-A3LF-01 CESC 6 NA 0 0 0 0 0 0 0 NA 0 1 NA #> 2224 TCGA-IR-A3LH-01 CESC 10 0 NA 0 0 NA 1 -1 NA 1 0 1 NA #> 2225 TCGA-IR-A3LI-01 CESC 1 0 1 0 0 0 NA 0 0 0 0 0 0 #> 2226 TCGA-IR-A3LK-01 CESC 6 0 0 0 NA NA 0 0 0 1 0 0 0 #> 2227 TCGA-IR-A3LL-01 CESC 13 1 1 0 0 0 1 0 0 1 1 0 0 #> 2228 TCGA-JW-A5VG-01 CESC 6 0 0 0 NA 0 0 0 0 1 0 0 0 #> 2229 TCGA-JW-A5VH-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2230 TCGA-JW-A5VI-01 CESC 7 0 0 0 0 -1 0 -1 0 1 -1 0 0 #> 2231 TCGA-JW-A5VJ-01 CESC 10 0 1 1 0 -1 1 0 0 0 0 -1 -1 #> 2232 TCGA-JW-A5VK-01 CESC 10 0 0 0 0 0 1 -1 -1 0 0 0 0 #> 2233 TCGA-JW-A5VL-01 CESC 5 0 0 0 1 0 1 0 0 0 0 0 0 #> 2234 TCGA-JW-A69B-01 CESC 9 0 0 0 0 0 0 0 0 0 0 NA 0 #> 2235 TCGA-JW-A852-01 CESC 2 0 1 0 0 0 NA 0 0 0 0 0 NA #> 2236 TCGA-JW-AAVH-01 CESC 5 0 1 0 0 -1 1 0 0 1 0 0 0 #> 2237 TCGA-JX-A3PZ-01 CESC 10 0 0 0 NA -1 -1 0 0 0 0 -1 -1 #> 2238 TCGA-JX-A3Q0-01 CESC 10 1 1 0 0 1 1 0 0 0 0 0 0 #> 2239 TCGA-JX-A3Q8-01 CESC 18 NA 1 0 0 -1 1 0 1 0 0 1 1 #> 2240 TCGA-JX-A5QV-01 CESC 21 1 1 1 -1 NA 1 -1 -1 1 0 -1 -1 #> 2241 TCGA-LP-A4AU-01 CESC 18 0 1 0 NA 1 1 -1 -1 0 0 1 0 #> 2242 TCGA-LP-A4AV-01 CESC 5 1 1 0 NA NA NA 0 0 1 0 0 0 #> 2243 TCGA-LP-A4AW-01 CESC 5 NA 0 0 0 0 NA -1 NA 1 -1 0 0 #> 2244 TCGA-LP-A4AX-01 CESC 7 NA 0 0 NA NA 0 NA 0 0 0 NA 0 #> 2245 TCGA-LP-A5U2-01 CESC 10 1 1 0 NA 0 NA -1 0 0 0 0 0 #> 2246 TCGA-LP-A5U3-01 CESC 3 0 0 0 NA 0 NA 0 NA NA 0 0 0 #> 2247 TCGA-LP-A7HU-01 CESC 21 0 0 1 -1 1 1 0 0 0 0 0 0 #> 2248 TCGA-MA-AA3W-01 CESC 5 0 NA 0 NA NA NA -1 NA NA 0 0 0 #> 2249 TCGA-MA-AA3X-01 CESC 22 1 1 0 0 0 1 -1 -1 0 0 0 0 #> 2250 TCGA-MA-AA3Y-01 CESC 5 0 0 0 NA 0 0 0 0 1 0 1 0 #> 2251 TCGA-MA-AA3Z-01 CESC 3 0 0 NA 0 0 NA -1 0 1 -1 NA 0 #> 2252 TCGA-MA-AA41-01 CESC 9 0 1 1 0 NA 1 NA 1 0 0 NA 0 #> 2253 TCGA-MA-AA42-01 CESC 12 0 1 0 0 -1 1 0 0 1 0 -1 -1 #> 2254 TCGA-MA-AA43-01 CESC 27 0 0 -1 -1 -1 -1 -1 -1 NA 0 1 1 #> 2255 TCGA-MU-A51Y-01 CESC 2 0 0 0 0 0 1 0 0 0 NA 0 0 #> 2256 TCGA-MU-A5YI-01 CESC 9 0 0 0 0 -1 1 0 0 0 0 1 -1 #> 2257 TCGA-MU-A8JM-01 CESC 4 0 0 0 0 0 1 -1 0 0 0 0 0 #> 2258 TCGA-MY-A5BD-01 CESC 2 0 0 0 0 0 NA 0 0 0 0 NA 0 #> 2259 TCGA-MY-A5BE-01 CESC 15 1 1 0 0 0 1 0 0 1 1 0 0 #> 2260 TCGA-MY-A5BF-01 CESC 7 0 0 0 NA 0 NA -1 0 0 0 0 0 #> 2261 TCGA-MY-A913-01 CESC 17 -1 -1 0 NA -1 NA -1 -1 -1 -1 1 NA #> 2262 TCGA-PN-A8MA-01 CESC 20 1 1 0 0 0 0 0 0 1 0 NA 0 #> 2263 TCGA-Q1-A5R1-01 CESC 1 0 0 NA -1 0 NA 0 0 0 0 0 0 #> 2264 TCGA-Q1-A5R2-01 CESC 14 NA 0 0 NA NA 1 NA -1 1 0 1 NA #> 2265 TCGA-Q1-A5R3-01 CESC 12 0 1 1 0 0 1 -1 0 1 -1 0 0 #> 2266 TCGA-Q1-A6DT-01 CESC 20 NA 0 0 NA NA 1 -1 0 1 -1 0 -1 #> 2267 TCGA-Q1-A6DV-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2268 TCGA-Q1-A6DW-01 CESC 6 NA NA 0 0 0 1 0 0 NA 0 0 0 #> 2269 TCGA-Q1-A73O-01 CESC 1 0 0 0 0 0 1 0 0 0 0 0 0 #> 2270 TCGA-Q1-A73P-01 CESC 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 2271 TCGA-Q1-A73Q-01 CESC 5 0 1 0 0 -1 NA 0 0 0 0 0 0 #> 2272 TCGA-Q1-A73R-01 CESC 1 0 1 0 0 0 0 0 0 0 0 0 0 #> 2273 TCGA-Q1-A73S-01 CESC 13 0 0 1 1 -1 -1 -1 -1 0 NA 0 0 #> 2274 TCGA-R2-A69V-01 CESC 8 NA 1 NA NA 0 1 0 NA 0 0 0 NA #> 2275 TCGA-RA-A741-01 CESC 7 0 0 0 NA 0 0 0 0 0 0 0 0 #> 2276 TCGA-UC-A7PD-01 CESC 1 0 0 NA NA 0 0 0 0 0 0 1 0 #> 2277 TCGA-UC-A7PF-01 CESC 7 0 1 1 NA -1 1 0 0 0 0 NA 0 #> 2278 TCGA-UC-A7PG-01 CESC 23 0 1 -1 -1 -1 1 -1 -1 0 0 -1 -1 #> 2279 TCGA-UC-A7PG-06 CESC 24 1 1 -1 -1 -1 1 -1 -1 0 0 0 NA #> 2280 TCGA-UC-A7PI-01 CESC 6 0 0 0 0 0 0 0 0 1 0 0 0 #> 2281 TCGA-VS-A8EB-01 CESC 18 -1 1 0 NA NA 1 -1 NA NA 0 0 -1 #> 2282 TCGA-VS-A8EC-01 CESC 16 NA 0 NA NA -1 1 -1 NA 0 0 0 0 #> 2283 TCGA-VS-A8EG-01 CESC 2 NA NA 0 NA 0 1 -1 0 0 0 0 0 #> 2284 TCGA-VS-A8EH-01 CESC 13 0 NA 0 NA NA NA -1 -1 1 NA 0 0 #> 2285 TCGA-VS-A8EI-01 CESC 9 0 0 0 NA -1 NA 0 -1 1 -1 NA NA #> 2286 TCGA-VS-A8EJ-01 CESC 16 NA NA NA NA NA 1 -1 NA 1 -1 NA -1 #> 2287 TCGA-VS-A8EL-01 CESC 4 0 1 0 NA 0 0 0 0 1 0 0 NA #> 2288 TCGA-VS-A8Q8-01 CESC 10 0 1 0 0 -1 1 -1 -1 0 0 0 0 #> 2289 TCGA-VS-A8Q9-01 CESC 10 -1 NA 0 0 -1 1 0 0 0 0 0 0 #> 2290 TCGA-VS-A8QA-01 CESC 8 0 0 0 0 -1 1 0 0 0 0 0 0 #> 2291 TCGA-VS-A8QC-01 CESC 12 NA 1 0 NA -1 1 -1 1 1 0 NA -1 #> 2292 TCGA-VS-A8QF-01 CESC 7 NA 1 0 NA NA NA 0 0 0 0 0 0 #> 2293 TCGA-VS-A8QH-01 CESC 8 0 0 0 0 NA 0 0 0 0 0 0 0 #> 2294 TCGA-VS-A8QM-01 CESC 5 0 0 0 0 0 1 0 0 0 0 0 0 #> 2295 TCGA-VS-A94W-01 CESC 7 0 0 0 0 0 1 -1 NA 0 0 0 0 #> 2296 TCGA-VS-A94X-01 CESC 13 0 1 1 0 0 1 0 0 1 0 0 0 #> 2297 TCGA-VS-A94Y-01 CESC 9 NA 1 NA NA -1 1 0 NA 1 0 NA NA #> 2298 TCGA-VS-A94Z-01 CESC 7 0 0 0 0 -1 1 0 0 0 0 0 0 #> 2299 TCGA-VS-A950-01 CESC 24 -1 NA 0 0 -1 1 -1 -1 1 0 0 NA #> 2300 TCGA-VS-A952-01 CESC 5 0 0 NA 0 0 0 0 0 0 0 1 1 #> 2301 TCGA-VS-A953-01 CESC 29 -1 -1 -1 -1 -1 1 -1 -1 1 1 NA NA #> 2302 TCGA-VS-A954-01 CESC 9 1 1 0 0 0 1 0 0 0 0 0 0 #> 2303 TCGA-VS-A957-01 CESC 3 NA 1 0 0 NA 1 0 NA 0 0 0 0 #> 2304 TCGA-VS-A958-01 CESC 4 0 0 0 0 0 0 -1 NA 1 NA 0 0 #> 2305 TCGA-VS-A959-01 CESC 14 NA 1 NA NA NA 1 -1 -1 1 0 NA -1 #> 2306 TCGA-VS-A9U5-01 CESC 22 NA 1 NA NA -1 1 -1 -1 1 NA 1 -1 #> 2307 TCGA-VS-A9U6-01 CESC 9 0 1 1 0 NA 1 0 0 0 0 NA 0 #> 2308 TCGA-VS-A9U7-01 CESC 1 0 0 0 NA 0 NA 0 0 0 0 NA 0 #> 2309 TCGA-VS-A9UA-01 CESC 6 1 1 0 0 NA 1 0 0 1 0 0 0 #> 2310 TCGA-VS-A9UB-01 CESC 11 0 0 1 NA 0 1 0 0 1 0 NA 0 #> 2311 TCGA-VS-A9UC-01 CESC 4 0 NA 1 NA 0 0 0 NA NA 1 1 -1 #> 2312 TCGA-VS-A9UD-01 CESC 28 NA 1 1 1 -1 1 -1 0 1 0 1 1 #> 2313 TCGA-VS-A9UH-01 CESC 22 1 0 -1 -1 -1 1 -1 -1 NA 0 NA 0 #> 2314 TCGA-VS-A9UI-01 CESC 15 NA 1 1 0 1 1 0 0 1 0 1 1 #> 2315 TCGA-VS-A9UJ-01 CESC 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2316 TCGA-VS-A9UL-01 CESC 18 NA 1 NA NA -1 NA -1 -1 1 NA 1 NA #> 2317 TCGA-VS-A9UM-01 CESC 6 NA 1 0 0 -1 1 -1 NA 0 0 0 0 #> 2318 TCGA-VS-A9UO-01 CESC 5 NA 0 0 NA 0 NA -1 -1 0 0 NA 0 #> 2319 TCGA-VS-A9UP-01 CESC 28 -1 1 1 NA -1 1 -1 -1 NA NA -1 -1 #> 2320 TCGA-VS-A9UQ-01 CESC 2 0 0 0 0 0 NA 0 0 0 0 0 0 #> 2321 TCGA-VS-A9UR-01 CESC 5 0 0 0 0 NA 0 0 0 0 0 0 0 #> 2322 TCGA-VS-A9UT-01 CESC 13 NA NA 0 0 NA 0 -1 -1 0 -1 0 NA #> 2323 TCGA-VS-A9UU-01 CESC 23 0 0 0 0 0 1 0 0 -1 -1 -1 -1 #> 2324 TCGA-VS-A9UV-01 CESC 10 0 1 0 0 -1 1 -1 0 0 0 0 0 #> 2325 TCGA-VS-A9UY-01 CESC 5 0 0 0 NA 0 NA 0 0 1 0 NA 0 #> 2326 TCGA-VS-A9UZ-01 CESC 1 0 0 0 0 0 NA 0 0 0 0 0 0 #> 2327 TCGA-VS-A9V0-01 CESC 10 NA NA 0 NA 0 NA 0 NA 0 0 0 0 #> 2328 TCGA-VS-A9V1-01 CESC 2 0 0 0 0 0 NA 0 0 0 0 0 0 #> 2329 TCGA-VS-A9V2-01 CESC 6 0 1 NA NA 0 1 0 NA 0 0 NA -1 #> 2330 TCGA-VS-A9V3-01 CESC 7 NA 1 1 0 0 0 0 0 0 0 -1 -1 #> 2331 TCGA-VS-A9V4-01 CESC 17 0 0 0 0 0 0 -1 -1 1 NA 0 0 #> 2332 TCGA-VS-A9V5-01 CESC 4 NA 0 1 -1 0 0 0 0 0 0 0 0 #> 2333 TCGA-VS-AA62-01 CESC 3 0 0 0 0 NA 1 0 0 0 0 NA 0 #> 2334 TCGA-WL-A834-01 CESC 12 0 1 1 NA NA 1 -1 -1 1 -1 0 0 #> 2335 TCGA-XS-A8TJ-01 CESC 20 0 1 0 -1 -1 1 -1 0 1 -1 0 -1 #> 2336 TCGA-ZJ-A8QO-01 CESC 17 0 0 0 0 -1 1 1 1 0 0 -1 -1 #> 2337 TCGA-ZJ-A8QQ-01 CESC 5 0 0 0 NA NA 0 0 NA NA 0 0 0 #> 2338 TCGA-ZJ-A8QR-01 CESC 5 0 0 0 NA -1 NA -1 0 0 -1 0 -1 #> 2339 TCGA-ZJ-AAX4-01 CESC 16 0 0 0 -1 -1 0 1 1 0 0 0 0 #> 2340 TCGA-ZJ-AAX8-01 CESC 1 NA 0 0 0 NA NA 0 0 1 0 0 0 #> 2341 TCGA-ZJ-AAXA-01 CESC 17 1 1 0 0 1 1 -1 -1 NA 0 1 0 #> 2342 TCGA-ZJ-AAXB-01 CESC 23 0 1 1 0 -1 1 -1 -1 1 -1 0 -1 #> 2343 TCGA-ZJ-AAXD-01 CESC 23 1 1 0 0 -1 1 -1 -1 1 1 0 0 #> 2344 TCGA-ZJ-AAXF-01 CESC 21 1 1 0 0 0 0 0 0 0 0 -1 -1 #> 2345 TCGA-ZJ-AAXI-01 CESC 6 NA 1 0 0 0 1 -1 0 1 0 0 0 #> 2346 TCGA-ZJ-AAXJ-01 CESC 7 NA NA 0 NA -1 1 -1 -1 1 0 0 0 #> 2347 TCGA-ZJ-AAXN-01 CESC 3 0 1 0 NA 0 0 0 0 1 0 0 0 #> 2348 TCGA-ZJ-AAXT-01 CESC 8 0 0 0 0 -1 0 0 0 -1 0 0 -1 #> 2349 TCGA-ZJ-AAXU-01 CESC 9 0 0 0 0 -1 1 0 0 1 0 0 0 #> 2350 TCGA-ZJ-AB0H-01 CESC 28 -1 1 1 -1 NA 1 -1 NA 1 -1 -1 -1 #> 2351 TCGA-ZJ-AB0I-01 CESC 4 0 NA NA NA NA NA -1 NA NA NA NA 0 #> 2352 TCGA-ZX-AA5X-01 CESC 4 1 1 0 NA 0 0 0 0 0 0 NA 0 #> 2353 TCGA-CS-4938-01 LGG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2354 TCGA-CS-4941-01 LGG 7 1 1 0 0 0 0 0 0 0 0 0 0 #> 2355 TCGA-CS-4942-01 LGG 2 0 0 0 0 0 0 0 0 0 0 NA 0 #> 2356 TCGA-CS-4943-01 LGG 5 0 0 0 0 0 0 NA -1 NA 0 0 0 #> 2357 TCGA-CS-4944-01 LGG 1 NA 0 0 0 0 0 0 0 0 0 0 -1 #> 2358 TCGA-CS-5390-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2359 TCGA-CS-5393-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2360 TCGA-CS-5394-01 LGG 1 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2361 TCGA-CS-5395-01 LGG 8 0 NA 0 0 0 NA 0 0 0 0 0 0 #> 2362 TCGA-CS-5396-01 LGG 6 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2363 TCGA-CS-5397-01 LGG 9 0 0 0 0 0 0 0 0 0 0 -1 -1 #> 2364 TCGA-CS-6186-01 LGG 7 0 0 0 0 0 0 0 0 0 0 0 0 #> 2365 TCGA-CS-6188-01 LGG 6 0 0 0 0 0 0 0 0 0 0 0 0 #> 2366 TCGA-CS-6290-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2367 TCGA-CS-6665-01 LGG 19 1 1 0 0 0 0 1 NA 0 NA NA 1 #> 2368 TCGA-CS-6666-01 LGG 8 0 0 0 NA NA -1 1 NA 0 NA 0 0 #> 2369 TCGA-CS-6667-01 LGG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2370 TCGA-CS-6668-01 LGG 2 -1 0 0 0 NA 0 0 0 0 0 0 0 #> 2371 TCGA-CS-6669-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2372 TCGA-CS-6670-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2373 TCGA-DB-5270-01 LGG 2 0 0 0 0 0 0 0 0 0 0 0 0 #> 2374 TCGA-DB-5273-01 LGG 1 0 0 0 0 0 0 0 0 0 0 0 0 #> 2375 TCGA-DB-5274-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2376 TCGA-DB-5275-01 LGG 3 NA 0 0 0 NA NA 0 -1 -1 0 0 0 #> 2377 TCGA-DB-5276-01 LGG 0 0 0 0 0 0 0 0 0 0 0 0 0 #> 2378 TCGA-DB-5277-01 LGG 9 0 NA NA 0 NA -1 0 -1 0 NA 0 0 #> 2379 TCGA-DB-5278-01 LGG 2 -1 0 0 0 0 0 0 0 0 0 0 0 #> 2380 TCGA-DB-5279-01 LGG 15 -1 0 0 0 0 0 -1 -1 0 0 0 0 #> 7p 7q 8p 8q 9p 9q 10p 10q 11p 11q 12p 12q 13 (13q) 14 (14q) 15 (15q) 16p #> 1 NA NA -1 0 -1 -1 -1 NA 0 0 NA 0 NA 0 -1 0 #> 2 1 1 1 1 1 1 1 NA 1 0 -1 -1 1 0 0 1 #> 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NA 0 #> 4 0 0 1 1 NA 0 0 NA NA 1 1 1 -1 -1 NA -1 #> 5 1 1 0 1 -1 0 -1 NA 0 0 0 0 NA 1 NA 0 #> 6 0 NA -1 NA -1 0 0 -1 -1 -1 1 0 NA NA -1 0 #> 7 0 0 1 1 0 NA 0 0 NA 0 0 0 0 0 NA 0 #> 8 0 0 -1 0 -1 0 0 NA NA 0 0 NA NA 1 NA NA #> 9 NA 0 -1 1 NA 1 NA NA NA -1 0 0 -1 NA NA 1 #> 10 1 1 -1 NA NA -1 1 NA -1 -1 1 0 -1 -1 0 0 #> 11 -1 1 -1 1 -1 -1 0 0 0 0 0 0 -1 0 NA 0 #> 12 1 NA NA 1 0 -1 -1 1 NA -1 1 NA NA 1 NA NA #> 13 1 NA NA 0 NA -1 -1 NA 0 0 0 0 NA NA 1 0 #> 14 0 0 0 NA -1 0 0 0 0 0 0 0 NA 0 0 0 #> 15 0 NA NA NA NA 0 NA -1 0 0 0 0 -1 NA 0 NA #> 16 1 0 -1 0 -1 0 0 NA NA 0 NA NA 0 0 0 -1 #> 17 0 0 0 0 -1 0 0 0 -1 0 1 1 -1 -1 0 1 #> 18 1 NA 1 1 -1 0 NA -1 NA 1 1 NA -1 0 NA 1 #> 19 1 1 -1 1 NA -1 -1 NA 0 0 0 0 -1 0 0 0 #> 20 1 1 -1 1 -1 1 -1 -1 -1 -1 0 0 -1 1 1 -1 #> 21 1 0 0 NA NA 0 -1 0 1 1 1 0 1 1 1 0 #> 22 0 0 NA NA -1 0 -1 0 -1 0 0 0 -1 0 -1 NA #> 23 1 NA -1 1 -1 -1 -1 -1 -1 -1 -1 -1 1 -1 -1 1 #> 24 0 -1 0 0 -1 -1 NA -1 -1 0 0 NA NA 0 NA 0 #> 25 0 0 -1 NA 0 NA NA 0 -1 0 NA NA NA NA 0 0 #> 26 1 1 NA 1 -1 0 1 -1 1 -1 0 0 NA 0 0 0 #> 27 1 0 NA 1 0 0 0 0 0 0 0 0 0 -1 0 0 #> 28 -1 NA -1 NA -1 -1 -1 1 NA 0 1 0 NA 0 NA -1 #> 29 -1 0 -1 NA -1 NA 1 NA NA -1 NA 0 -1 NA -1 0 #> 30 0 0 0 0 0 0 0 NA 0 NA NA 0 -1 -1 NA 0 #> 31 0 NA 0 0 0 0 0 -1 0 0 0 0 0 0 NA 0 #> 32 0 0 -1 0 NA 0 -1 -1 0 0 0 0 NA 0 -1 0 #> 33 0 0 NA 0 NA -1 0 0 0 0 0 0 0 0 0 -1 #> 34 0 0 -1 NA -1 -1 0 NA 0 0 0 0 0 0 0 0 #> 35 0 NA 0 0 -1 -1 -1 -1 0 -1 -1 -1 -1 0 0 0 #> 36 1 1 0 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— pcawg_purity","title":"Purity Data of PCAWG — pcawg_purity","text":"Purity Data PCAWG","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pcawg_purity.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Purity Data of PCAWG — pcawg_purity","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pcawg_purity.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Purity Data of PCAWG — pcawg_purity","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pcawg_purity.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Purity Data of PCAWG — pcawg_purity","text":"","code":"data(\"pcawg_purity\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pipe.html","id":null,"dir":"Reference","previous_headings":"","what":"Pipe Operator — %>%","title":"Pipe Operator — %>%","text":"See magrittr::%>% details.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/pipe.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Pipe Operator — %>%","text":"","code":"lhs %>% rhs"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Download data for shiny general analysis — query_general_value","title":"Download data for shiny general analysis — query_general_value","text":"Download data shiny general analysis","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Download data for shiny general analysis — query_general_value","text":"","code":"query_general_value( L1, L2, L3, database = c(\"toil\", \"pcawg\", \"ccle\"), tpc_value_nonomics = NULL, opt_pancan = NULL, custom_metadata = NULL )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Download data for shiny general analysis — query_general_value","text":"L1 level 1 main datatype L2 level 2 sub datatype L3 level 3 identifier database one c(\"toil\",\"pcawg\",\"ccle\") tpc_value_nonomics non-omics matrix data one database opt_pancan molecular datasets parameters custom_metadata user customized metadata","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_general_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Download data for shiny general analysis — query_general_value","text":"","code":"if (FALSE) { # \\dontrun{ general_value_id <- UCSCXenaShiny:::query_general_id() tcga_value_option <- general_value_id[[\"value\"]][[1]] tcga_index_value <- tcga_value_option[[\"Tumor index\"]] tcga_immune_value <- tcga_value_option[[\"Immune Infiltration\"]] tcga_pathway_value <- tcga_value_option[[\"Pathway activity\"]] tcga_phenotype_value <- tcga_value_option[[\"Phenotype data\"]] clinical_phe = tcga_phenotype_value[[\"Clinical Phenotype\"]] x_data = UCSCXenaShiny:::query_general_value( \"Molecular profile\", \"mRNA Expression\", \"TP53\", \"toil\", tcga_index_value, tcga_immune_value, tcga_pathway_value, clinical_phe) y_data = UCSCXenaShiny:::query_general_value( \"Immune Infiltration\", \"CIBERSORT\", \"Monocyte\", \"toil\", tcga_index_value, tcga_immune_value, tcga_pathway_value, clinical_phe) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"Get Molecule Signature Data Values Dense (Genomic) Matrix Dataset UCSC Xena Data Hubs","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"","code":"query_molecule_value(dataset, molecule, host = NULL)"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"dataset UCSC Xena dataset dense matrix format (rows features (e.g., gene, cell line) columns samples). molecule molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). NOTE, signature specified, space must exist input. host UCSC Xena host, default NULL, auto-detect dataset.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"named vector.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_molecule_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Get Molecule or Signature Data Values from Dense (Genomic) Matrix Dataset of UCSC Xena Data Hubs — query_molecule_value","text":"","code":"# What does dense matrix mean? table(UCSCXenaTools::XenaData$Type) #> #> clinicalMatrix genomicMatrix genomicSegment mutationVector #> 345 981 152 203 # It is a the UCSC Xena dataset with \"Type\" equals to \"genomicMatrix\" if (FALSE) { # \\dontrun{ dataset <- \"ccle/CCLE_copynumber_byGene_2013-12-03\" x <- query_molecule_value(dataset, \"TP53\") head(x) signature <- \"TP53 + 2*KRAS - 1.3*PTEN\" # a space must exist in the string y <- query_molecule_value(dataset, signature) head(y) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":null,"dir":"Reference","previous_headings":"","what":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"Query Single Identifier Signature Value Pan-cancer Database","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"","code":"query_pancan_value( molecule, data_type = c(\"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\", \"fusion\", \"promoter\", \"APOBEC\"), database = c(\"toil\", \"ccle\", \"pcawg\"), reset_id = NULL, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"molecule molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type data type. Can one \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". database database, either 'toil' TCGA TARGET GTEx, 'ccle' CCLE. reset_id NULL, set specified variable parent frame \"Signature\". opt_pancan extra parameters passing underlying functions.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"list.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"details","dir":"Reference","previous_headings":"","what":"Details","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"query_pancan_value() provide convenient interface download multi-omics data 3 databases specifying one several canonical datasets. derived query_pancan_value() support query genomic signature. query comprehensive datasets UCSCXena supports, users can check UCSCXenaTools::XenaData use get_pancan_value() directly. Option opt_pancan nested list allow adjust downloading details. now, cnv(toil),methylation(toil),miRNA(toil),miRNA(pcawg),promoter(pcawg) support optional parameters. default set .opt_pancan check meanings sublist(parameters) following relationship.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"-toil-database","dir":"Reference","previous_headings":"","what":"\"toil\" database","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"mRNA–get_pancan_gene_value() transcript–get_pancan_transcript_value() protein–get_pancan_protein_value() mutation–get_pancan_mutation_status() cnv–get_pancan_cn_value() methylation–get_pancan_methylation_value() miRNA–get_pancan_miRNA_value()","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"-ccle-database","dir":"Reference","previous_headings":"","what":"\"ccle\" database","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"mRNA–get_ccle_gene_value() protein–get_ccle_protein_value() mutation–get_ccle_mutation_status() cnv–get_ccle_cn_value()","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"-pcawg-database","dir":"Reference","previous_headings":"","what":"\"pcawg\" database","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"mRNA–get_pcawg_gene_value() miRNA–get_pcawg_miRNA_value() promoter–get_pcawg_promoter_value() fusion–get_pcawg_fusion_value() APOBEC–get_pcawg_APOBEC_mutagenesis_value()","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_pancan_value.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Query Single Identifier or Signature Value from Pan-cancer Database — query_pancan_value","text":"","code":"if (FALSE) { # \\dontrun{ query_pancan_value(\"KRAS\") query_pancan_value(\"KRAS\", database = \"ccle\") query_pancan_value(\"KRAS\", database = \"pcawg\") query_pancan_value(\"ENSG00000000419\", database = \"pcawg\", data_type = \"fusion\" ) # gene symbol also work .opt_pancan opt_pancan <- list(toil_cnv = list(use_thresholded_data = FALSE)) query_pancan_value(\"PTEN\", data_type = \"cnv\", database = \"toil\", opt_pancan = opt_pancan) opt_pancan <- list(toil_methylation = list(type = \"450K\", rule_out = \"cg21115430\", aggr = \"Q25\")) query_pancan_value(\"PTEN\", data_type = \"methylation\", database = \"toil\", opt_pancan = opt_pancan) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":null,"dir":"Reference","previous_headings":"","what":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"Group TPC samples build-custom phenotype support filtering merging operations","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"","code":"query_tcga_group( database = c(\"toil\", \"pcawg\", \"ccle\"), cancer = NULL, custom = NULL, group = \"Gender\", filter_by = NULL, filter_id = NULL, merge_by = NULL, merge_quantile = FALSE, return_all = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"database one c(\"toil\",\"pcawg\",\"ccle\") cancer select cancer cohort(s) custom upload custom phenotype data group target group names filter_by filter samples one multiple criterion filter_id directly filter samples provided sample ids merge_by merge target group main categories merge_quantile whether merge numerical variable percentiles return_all return phenotype data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"list object grouping samples statistics","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_tcga_group.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Group TPC samples by build-in or custom phenotype and support filtering or merging operations — query_tcga_group","text":"","code":"if (FALSE) { # \\dontrun{ query_tcga_group(group = \"Age\") query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\" ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", filter_by = list( c(\"Code\", c(\"TP\"), \"+\"), c(\"Stage_ajcc\", c(NA), \"-\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", filter_by = list( c(\"Age\", c(0.5), \"%>\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", filter_by = list( c(\"Age\", c(60), \">\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Stage_ajcc\", merge_by = list( \"Early\" = c(\"Stage I\"), \"Late\" = c(\"Stage II\", \"Stage III\", \"Stage IV\") ) ) query_tcga_group( cancer = \"BRCA\", group = \"Age\", merge_by = list( \"Young\" = c(20, 60), \"Old\" = c(60, NA) ) ) query_tcga_group( cancer = \"BRCA\", group = \"Age\", merge_quantile = TRUE, merge_by = list( \"Young\" = c(0, 0.5), \"Old\" = c(0.5, 1) ) ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":null,"dir":"Reference","previous_headings":"","what":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"Obtain ToilHub Info Single Molecule Obtain ToilHub Info Single Gene","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"","code":"query_toil_value_df(identifier = \"TP53\") query_toil_value_df(identifier = \"TP53\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"identifier length-1 character representing gene symbol, ensembl gene id, probe id. Gene symbol highly recommended.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"tibble tibble","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/query_toil_value_df.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Obtain ToilHub Info for Single Molecule — query_toil_value_df","text":"","code":"if (FALSE) { # \\dontrun{ t <- query_toil_value_df() t } # } if (FALSE) { # \\dontrun{ t <- query_toil_value_df() t } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: TCGA Clinical Data — tcga_clinical","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"See tcga_surv TCGA survival data.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: TCGA Clinical Data — tcga_clinical","text":"","code":"data(\"tcga_clinical\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"See tcga_surv TCGA survival data.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_clinical_fine.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: Cleaned TCGA Clinical Data for grouping — tcga_clinical_fine","text":"","code":"data(\"tcga_clinical_fine\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: Genome Instability Data — tcga_genome_instability","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"TCGA: Genome Instability Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"https://gdc.cancer.gov/-data/publications/PanCanStemness-2018","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_genome_instability.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: Genome Instability Data — tcga_genome_instability","text":"","code":"data(\"tcga_genome_instability\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_gtex.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","title":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","text":"Toil Hub: Merged TCGA GTEx Selected Phenotype","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_gtex.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_gtex.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: Merged TCGA GTEx Selected Phenotype — tcga_gtex","text":"","code":"data(\"tcga_gtex\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: Purity Data — tcga_purity","title":"TCGA: Purity Data — tcga_purity","text":"TCGA: Purity Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: Purity Data — tcga_purity","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA: Purity Data — tcga_purity","text":"https://www.nature.com/articles/ncomms9971#Sec14","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_purity.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: Purity Data — tcga_purity","text":"","code":"data(\"tcga_purity\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA Subtype Data — tcga_subtypes","title":"TCGA Subtype Data — tcga_subtypes","text":"TCGA Subtype Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA Subtype Data — tcga_subtypes","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA Subtype Data — tcga_subtypes","text":"UCSC Xena.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_subtypes.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA Subtype Data — tcga_subtypes","text":"","code":"data(\"tcga_subtypes\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: TCGA Survival Data — tcga_surv","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"Toil Hub: TCGA Survival Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: TCGA Survival Data — tcga_surv","text":"","code":"data(\"tcga_surv\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA Survival Analysis — tcga survival analysis","title":"TCGA Survival Analysis — tcga survival analysis","text":"Firstly, get merged data one molecular profile value associated clinical data TCGA Pan-Cancer dataset. Secondly, filter data wish. Finally, show K-M plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"TCGA Survival Analysis — tcga survival analysis","text":"","code":"tcga_surv_get( item, TCGA_cohort = \"LUAD\", profile = c(\"mRNA\", \"miRNA\", \"methylation\", \"transcript\", \"protein\", \"mutation\", \"cnv\"), TCGA_cli_data = dplyr::full_join(load_data(\"tcga_clinical\"), load_data(\"tcga_surv\"), by = \"sample\"), opt_pancan = .opt_pancan ) tcga_surv_plot( data, time = \"time\", status = \"status\", cutoff_mode = c(\"Auto\", \"Custom\"), cutpoint = c(50, 50), cnv_type = c(\"Duplicated\", \"Normal\", \"Deleted\"), profile = c(\"mRNA\", \"miRNA\", \"methylation\", \"transcript\", \"protein\", \"mutation\", \"cnv\"), palette = \"aaas\", ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"TCGA Survival Analysis — tcga survival analysis","text":"item molecular identifier, can gene symbol (common cases), protein symbol, etc. TCGA_cohort TCGA cohort, e.g. \"LUAD\" (default), \"LUSC\", \"ACC\". profile molecular profile. Option can one \"mRNA\" (default), \"miRNA\", \"methylation\", \"transcript\", \"protein\", \"mutation\", \"cnv\". TCGA_cli_data data.frame containing TCGA clinical data. Default use pre-compiled TCGA clinical data package. opt_pancan specify one dataset molercular profiles data subset result tcga_surv_get(). time column name \"time\". status column name \"status\". cutoff_mode mode grouping samples, can \"Auto\" (default) \"Custom\". cutpoint cut point (percent) \"Custom\" mode, default c(50, 50). cnv_type used profile \"cnv\", can select c(\"Duplicated\", \"Normal\", \"Deleted\"). palette color palette, can \"hue\", \"grey\", \"RdBu\", \"Blues\", \"npg\", \"aaas\", etc. see ?survminer::ggsurvplot. ... parameters passing survminer::ggsurvplot","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"TCGA Survival Analysis — tcga survival analysis","text":"data.frame plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_surv_analysis.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA Survival Analysis — tcga survival analysis","text":"","code":"if (FALSE) { # \\dontrun{ # 1. get data data <- tcga_surv_get(\"TP53\") # 2. filter data (optional) # 3. show K-M plot tcga_surv_plot(data, time = \"DSS.time\", status = \"DSS\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":null,"dir":"Reference","previous_headings":"","what":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"TCGA: TMB (Tumor Mutation Burden) Data","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"https://gdc.cancer.gov/-data/publications/panimmune","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/tcga_tmb.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"TCGA: TMB (Tumor Mutation Burden) Data — tcga_tmb","text":"","code":"data(\"tcga_tmb\") #> Warning: data set ‘tcga_tmb’ not found"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":null,"dir":"Reference","previous_headings":"","what":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"Toil Hub: TCGA TARGET GTEX Selected Phenotype","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"Generate data-raw","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/toil_info.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Toil Hub: TCGA TARGET GTEX Selected Phenotype — toil_info","text":"","code":"data(\"toil_info\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"Visualize CCLE Gene Expression Correlation","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"","code":"vis_ccle_gene_cor( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", cor_method = \"spearman\", use_log_x = FALSE, use_log_y = FALSE, use_regline = TRUE, SitePrimary = \"prostate\", use_all = FALSE, alpha = 0.5, color = \"#000000\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" cor_method correlation method use_log_x TRUE, log X values. use_log_y TRUE, log Y values. use_regline TRUE, add regression line. SitePrimary select cell line origin tissue. use_all use sample, default FALSE. alpha dot alpha. color dot color. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_gene_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize CCLE Gene Expression Correlation — vis_ccle_gene_cor","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize CCLE Gene Expression — vis_ccle_tpm","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"Visualize CCLE Gene Expression","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"","code":"vis_ccle_tpm( Gene = \"TP53\", data_type = \"mRNA\", use_log = FALSE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type support genomic profile CCLE, currently \"mRNA\", \"protein\",\"cnv\" supported use_log TRUE, log values. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_ccle_tpm.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize CCLE Gene Expression — vis_ccle_tpm","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"Visualize distribution difference samples dimensionality reduction analysis","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"","code":"vis_dim_dist( ids = c(\"TP53\", \"KRAS\", \"PTEN\", \"MDM2\", \"CDKN1A\"), data_type = \"mRNA\", group_info = NULL, DR_method = c(\"PCA\", \"UMAP\", \"tSNE\"), palette = \"Set1\", add_margin = NULL, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"ids molecular identifiers (>=3) data_type molecular types, refer query_pancan_value() function group_info two-column grouping information names 'Sample','Group' DR_method dimensionality reduction method palette color setting RColorBrewer add_margin marginal plot (NULL, \"density\", \"boxplot\") opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"ggplot object rawdata list","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_dim_dist.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize the distribution difference of samples after dimensionality reduction analysis — vis_dim_dist","text":"","code":"if (FALSE) { # \\dontrun{ group_info <- tcga_clinical_fine %>% dplyr::filter(Cancer == \"BRCA\") %>% dplyr::select(Sample, Code) %>% dplyr::rename(Group = Code) vis_dim_dist( ids = c(\"TP53\", \"KRAS\", \"PTEN\", \"MDM2\", \"CDKN1A\"), group_info = group_info ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"Heatmap Correlation Gene Tumor Immune Infiltration (TIL)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"","code":"vis_gene_TIL_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", sig = c(\"B cell_TIMER\", \"T cell CD4+_TIMER\", \"T cell CD8+_TIMER\", \"Neutrophil_TIMER\", \"Macrophage_TIMER\", \"Myeloid dendritic cell_TIMER\"), Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". sig Immune Signature, default: result TIMER Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_TIL_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Heatmap for Correlation between Gene and Tumor Immune Infiltration (TIL) — vis_gene_TIL_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_TIL_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","title":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","text":"Visualize Gene-Gene Correlation TCGA","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","text":"","code":"vis_gene_cor( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", use_regline = TRUE, purity_adj = TRUE, alpha = 0.5, color = \"#000000\", filter_tumor = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene-Gene Correlation in TCGA — vis_gene_cor","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" use_regline TRUE, add regression line. purity_adj whether performing partial correlation adjusted purity alpha dot alpha. color dot color. filter_tumor whether use tumor sample , default TRUE opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor_cancer.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","title":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","text":"Visualize Gene-Gene Correlation TCGA Cancer Type","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor_cancer.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","text":"","code":"vis_gene_cor_cancer( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", purity_adj = TRUE, cancer_choose = \"GBM\", use_regline = TRUE, cor_method = \"spearman\", use_all = FALSE, alpha = 0.5, color = \"#000000\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cor_cancer.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene-Gene Correlation in a TCGA Cancer Type — vis_gene_cor_cancer","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" purity_adj whether performing partial correlation adjusted purity cancer_choose TCGA cohort name, e.g. \"ACC\". use_regline TRUE, add regression line. cor_method correlation method. use_all use sample, default FALSE. alpha dot alpha. color dot color. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"Visualize cross-omics one gene among pan-cancers","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"","code":"vis_gene_cross_omics( gene = \"TP53\", tumor_projects = NULL, tumor_samples = NULL, n_trans = 5, n_methy = 5, seed = 42, pval_mrna = c(0.05, 0.01, 0.001), return_list = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"gene gene symbol identifier (e.g., \"TP53\") tumor_projects Select specific TCGA projects. Default NULL, indicating TCGA projects. tumor_samples Select specific tumor samples. Default NULL, indicating tumor samples. n_trans number sampling transcripts specific transcript identifiers. n_methy number sampling CpG sites specific CpG identifiers. seed seed sampling. pval_mrna P value thresholds return_list TRUE returns list including plot object data. FALSE just returns plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_cross_omics.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize cross-omics of one gene among pan-cancers — vis_gene_cross_omics","text":"funkyheatmap","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"See analyze_gene_drug_response_asso examples.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"","code":"vis_gene_drug_response_asso( Gene = \"TP53\", x_axis_type = c(\"mean.diff\", \"median.diff\"), output_form = c(\"plotly\", \"ggplot2\") )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). x_axis_type set value type X axis. output_form plotly ggplot2.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_asso.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene and Drug-Target Association with CCLE Data — vis_gene_drug_response_asso","text":"plotly ggplot2 object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"See analyze_gene_drug_response_diff examples.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"","code":"vis_gene_drug_response_diff( Gene = \"TP53\", tissue = \"lung\", Show.P.label = TRUE, Method = \"wilcox.test\", values = c(\"#DF2020\", \"#DDDF21\"), alpha = 0.5 )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). tissue select cell line origin tissue. Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal alpha set alpha dots.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_drug_response_diff.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene and Drug Response Difference with CCLE Data — vis_gene_drug_response_diff","text":"ggplot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"Heatmap Correlation Gene Immune Signatures","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"","code":"vis_gene_immune_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Immune_sig_type = \"Cibersort\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Immune_sig_type quantification method, default \"Cibersort\" Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_immune_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Heatmap for Correlation between Gene and Immune Signatures — vis_gene_immune_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_immune_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"Visualize Correlation Gene MSI (Microsatellite instability)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"","code":"vis_gene_msi_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_msi_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and MSI (Microsatellite instability) — vis_gene_msi_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_msi_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"Visualize Correlation Gene Pathway signature Score","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"","code":"vis_gene_pw_cor( Gene = \"TP53\", data_type = \"mRNA\", pw_name = \"HALLMARK_ADIPOGENESIS\", cancer_choose = \"GBM\", use_regline = TRUE, cor_method = \"spearman\", use_all = FALSE, alpha = 0.5, color = \"#000000\", filter_tumor = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". pw_name queried Pathway name, see supported pathway 'load(\"toil_sig_score\")'default NULL cancer_choose select cancer cohort(s) use_regline TRUE, add regression line. cor_method select correlation coefficient (pearson/spearman) use_all use sample, default FALSE. alpha dot alpha. color dot color. filter_tumor whether use tumor sample , default TRUE opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"ggplot object dataframe","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_pw_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and Pathway signature Score — vis_gene_pw_cor","text":"","code":"if (FALSE) { # \\dontrun{ vis_gene_pw_cor( Gene = \"TP53\", data_type = \"mRNA\", pw_name = \"HALLMARK_ADIPOGENESIS\", cancer_choose = \"BRCA\" ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"Visualize Correlation Gene Tumor Stemness","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"","code":"vis_gene_stemness_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_stemness_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and Tumor Stemness — vis_gene_stemness_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_stemness_cor(Gene = \"TP53\") p } # } ## To generate a radar plot, uncomment the following code # pdata <- p$data %>% # dplyr::mutate(cor = round(cor, digits = 3), p.value = round(p.value, digits = 3)) # # df <- pdata %>% # select(cor, cancer) %>% # pivot_wider(names_from = cancer, values_from = cor) # # ggradar::ggradar( # df[1, ], # font.radar = \"sans\", # values.radar = c(\"-1\", \"0\", \"1\"), # grid.min = -1, grid.mid = 0, grid.max = 1, # # Background and grid lines # background.circle.colour = \"white\", # gridline.mid.colour = \"grey\", # # Polygons # group.line.width = 1, # group.point.size = 3, # group.colours = \"#00AFBB\") + # theme(plot.title = element_text(hjust = .5))"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"Visualize Correlation Gene TMB (Tumor Mutation Burden)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"","code":"vis_gene_tmb_cor( Gene = \"TP53\", cor_method = \"spearman\", data_type = \"mRNA\", Plot = \"TRUE\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). cor_method correlation method data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Plot output plot directly, default 'TRUE' opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_gene_tmb_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation between Gene and TMB (Tumor Mutation Burden) — vis_gene_tmb_cor","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_gene_tmb_cor(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"","code":"vis_identifier_cor( dataset1, id1, dataset2, id2, samples = NULL, use_ggstats = FALSE, use_simple_axis_label = TRUE, line_color = \"blue\", alpha = 0.5, ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"dataset1 dataset obtain id1. id1 first molecule identifier. dataset2 dataset obtain id2. id2 second molecule identifier. samples default NULL, can common sample names two datasets. use_ggstats TRUE, use ggstatsplot package plotting. use_simple_axis_label TRUE (default), use simple axis labels. Otherwise, data subtype labeled. line_color set color regression line. alpha set alpha dots. ... parameters passing ggscatter.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Identifier-Identifier Correlation — vis_identifier_cor","text":"","code":"if (FALSE) { # \\dontrun{ dataset <- \"TcgaTargetGtex_rsem_isoform_tpm\" id1 <- \"TP53\" id2 <- \"KRAS\" vis_identifier_cor(dataset, id1, dataset, id2) samples <- c( \"TCGA-D5-5538-01\", \"TCGA-VM-A8C8-01\", \"TCGA-ZN-A9VQ-01\", \"TCGA-EE-A17X-06\", \"TCGA-05-4420-01\" ) vis_identifier_cor(dataset, id1, dataset, id2, samples) dataset1 <- \"TCGA-BLCA.htseq_counts.tsv\" dataset2 <- \"TCGA-BLCA.gistic.tsv\" id1 <- \"TP53\" id2 <- \"KRAS\" vis_identifier_cor(dataset1, id1, dataset2, id2) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"","code":"vis_identifier_dim_dist( dataset = NULL, ids = NULL, grp_df, samples = NULL, return.data = FALSE, DR_method = c(\"PCA\", \"UMAP\", \"tSNE\"), add_margin = NULL, palette = \"Set1\" )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"dataset dataset obtain identifiers. ids molecule identifiers. grp_df dataset id NULL, data.frame 2 columns. first column refers sample ID. second column refers groups indicated axis X. samples default NULL, can common sample names two datasets. return.data whether reture raw meta/matrix data (list) instead plot DR_method dimensionality reduction method add_margin marginal plot (NULL, \"density\", \"boxplot\") palette color setting RColorBrewer","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"ggplot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_dim_dist.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize the distribution difference of samples after Molecule Identifier dimensionality reduction analysis — vis_identifier_dim_dist","text":"","code":"# vis_identifier_dim_dist(expr_dataset, ids, grp_df, DR_method=\"PCA\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"","code":"vis_identifier_grp_comparison( dataset = NULL, id = NULL, grp_df, samples = NULL, fun_type = c(\"betweenstats\", \"withinstats\"), type = c(\"parametric\", \"nonparametric\", \"robust\", \"bayes\"), pairwise.comparisons = TRUE, p.adjust.method = c(\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"BY\", \"fdr\", \"none\"), ggtheme = cowplot::theme_cowplot(), ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"dataset dataset obtain identifiers. id molecule identifier. grp_df dataset id NULL, data.frame 2 3 columns. first column refers sample ID. second column refers groups indicated axis X. third column optional, indicates facet variable. dataset id NULL, data.frame 3 4 columns. first column refers sample ID. second column refers values indicated axis Y. third column refers groups indicated axis X. fourth column optional, indicates facet variable. samples default NULL, can common sample names two datasets. fun_type select function compare groups. type character specifying type statistical approach: \"parametric\" \"nonparametric\" \"robust\" \"bayes\" can specify just initial letter. pairwise.comparisons whether pairwise comparison p.adjust.method Adjustment method p-values multiple comparisons. Possible methods : \"holm\" (default), \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\". ggtheme {ggplot2} theme. Default value ggstatsplot::theme_ggstatsplot(). {ggplot2} themes (e.g., theme_bw()), themes extension packages allowed (e.g., ggthemes::theme_fivethirtyeight(), hrbrthemes::theme_ipsum_ps(), etc.). note sometimes themes remove details {ggstatsplot} plots typically contains. example, relevant, ggbetweenstats() shows details multiple comparison test label secondary Y-axis. themes (e.g. ggthemes::theme_fivethirtyeight()) remove secondary Y-axis thus details well. ... parameters passing ggstatsplot::ggbetweenstats ggstatsplot::ggwithinstats.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_comparison.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Comparison of an Molecule Identifier between Groups — vis_identifier_grp_comparison","text":"","code":"if (FALSE) { # \\dontrun{ library(UCSCXenaTools) expr_dataset <- \"TCGA.LUAD.sampleMap/HiSeqV2_percentile\" cli_dataset <- \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" id <- \"TP53\" cli_df <- XenaGenerate( subset = XenaDatasets == \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" ) %>% XenaQuery() %>% XenaDownload() %>% XenaPrepare() # group data.frame with 2 columns vis_identifier_grp_comparison(expr_dataset, id, cli_df[, c(\"sampleID\", \"gender\")]) # group data.frame with 3 columns vis_identifier_grp_comparison( expr_dataset, id, cli_df[, c(\"sampleID\", \"pathologic_M\", \"gender\")] %>% dplyr::filter(pathologic_M %in% c(\"M0\", \"MX\")) ) # When not use the value of `identifier` from `dataset` vis_identifier_grp_comparison(grp_df = cli_df[, c(1, 2, 71)]) vis_identifier_grp_comparison(grp_df = cli_df[, c(1, 2, 71, 111)]) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"","code":"vis_identifier_grp_surv( dataset = NULL, id = NULL, surv_df, samples = NULL, cutoff_mode = c(\"Auto\", \"Custom\", \"None\"), cutpoint = c(50, 50), palette = \"aaas\", ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"dataset dataset obtain identifiers. id molecule identifier. surv_df data.frame. \"time\" unit \"days\". 3 columns, names \"sample\", \"time\", \"status\". 4 columns, names \"sample\", \"value\", \"time\", \"status\". samples default NULL, can common sample names two datasets. cutoff_mode mode grouping samples, can \"Auto\" (default) \"Custom\" \"None\" (groups prepared). cutpoint cut point (percent) \"Custom\" mode, default c(50, 50). palette color palette, can \"hue\", \"grey\", \"RdBu\", \"Blues\", \"npg\", \"aaas\", etc. see ?survminer::ggsurvplot. ... parameters passing survminer::ggsurvplot","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_grp_surv.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Identifier Group Survival Difference — vis_identifier_grp_surv","text":"","code":"if (FALSE) { # \\dontrun{ library(UCSCXenaTools) expr_dataset <- \"TCGA.LUAD.sampleMap/HiSeqV2_percentile\" cli_dataset <- \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" id <- \"KRAS\" cli_df <- XenaGenerate( subset = XenaDatasets == \"TCGA.LUAD.sampleMap/LUAD_clinicalMatrix\" ) %>% XenaQuery() %>% XenaDownload() %>% XenaPrepare() # Use individual survival data surv_df1 <- cli_df[, c(\"sampleID\", \"ABSOLUTE_Ploidy\", \"days_to_death\", \"vital_status\")] surv_df1$vital_status <- ifelse(surv_df1$vital_status == \"DECEASED\", 1, 0) vis_identifier_grp_surv(surv_df = surv_df1) # Use both dataset argument and vis_identifier_grp_surv(surv_df = surv_df1) surv_df2 <- surv_df1[, c(1, 3, 4)] vis_identifier_grp_surv(expr_dataset, id, surv_df = surv_df2) vis_identifier_grp_surv(expr_dataset, id, surv_df = surv_df2, cutoff_mode = \"Custom\", cutpoint = c(25, 75) ) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"NOTE: dataset must dense matrix UCSC Xena data hubs.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"","code":"vis_identifier_multi_cor( dataset, ids, samples = NULL, matrix.type = c(\"full\", \"upper\", \"lower\"), type = c(\"parametric\", \"nonparametric\", \"robust\", \"bayes\"), partial = FALSE, sig.level = 0.05, p.adjust.method = c(\"holm\", \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"BY\", \"fdr\", \"none\"), color_low = \"#E69F00\", color_high = \"#009E73\", ... )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"dataset dataset obtain identifiers. ids molecule identifiers. samples default NULL, can common sample names two datasets. matrix.type Character, \"upper\" (default), \"lower\", \"full\", display full matrix, lower triangular upper triangular matrix. type character specifying type statistical approach: \"parametric\" \"nonparametric\" \"robust\" \"bayes\" can specify just initial letter. partial Can TRUE partial correlations. Bayesian partial correlations, \"full\" instead pseudo-Bayesian partial correlations (.e., Bayesian correlation based frequentist partialization) returned. sig.level Significance level (Default: 0.05). p-value p-value matrix bigger sig.level, corresponding correlation coefficient regarded insignificant flagged plot. p.adjust.method Adjustment method p-values multiple comparisons. Possible methods : \"holm\" (default), \"hochberg\", \"hommel\", \"bonferroni\", \"BH\", \"\", \"fdr\", \"none\". color_low color code lower value mapping. color_high color code higher value mapping. ... parameters passing ggstatsplot::ggcorrmat.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"(gg)plot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_identifier_multi_cor.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Correlation for Multiple Identifiers — vis_identifier_multi_cor","text":"","code":"if (FALSE) { # \\dontrun{ dataset <- \"TcgaTargetGtex_rsem_isoform_tpm\" ids <- c(\"TP53\", \"KRAS\", \"PTEN\") vis_identifier_multi_cor(dataset, ids) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"Visualize Single Gene Expression Anatomy Location","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"","code":"vis_pancan_anatomy( Gene = \"TP53\", Gender = c(\"Female\", \"Male\"), data_type = \"mRNA\", option = \"D\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gender string, \"Female\" (default) \"Male\". data_type choose gene profile type, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv\" option character string indicating color map option use. Eight options available: \"magma\" (\"\") \"inferno\" (\"B\") \"plasma\" (\"C\") \"viridis\" (\"D\") \"cividis\" (\"E\") \"rocket\" (\"F\") \"mako\" (\"G\") \"turbo\" (\"H\") opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pancan_anatomy.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Single Gene Expression in Anatomy Location — vis_pancan_anatomy","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"Visualize cross-omics one pathway among pan-cancers","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"","code":"vis_pathway_cross_omics( pw = \"HALLMARK_ADIPOGENESIS\", tumor_projects = NULL, tumor_samples = NULL, pval_mrna = c(0.05, 0.01, 0.001), return_list = FALSE )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"pw pathway name tumor_projects Select specific TCGA projects. Default NULL, indicating TCGA projects. tumor_samples Select specific tumor samples. Default NULL, indicating tumor samples. pval_mrna P value thresholds return_list TRUE returns list including plot object data. FALSE just returns plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pathway_cross_omics.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize cross-omics of one pathway among pan-cancers — vis_pathway_cross_omics","text":"funkyheatmap","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize molecular profile in PCAWG — vis_pcawg_dist","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"Visualize molecular profile PCAWG","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"","code":"vis_pcawg_dist( Gene = \"TP53\", Mode = c(\"Boxplot\", \"Violinplot\"), data_type = \"mRNA\", Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Mode \"Boxplot\" \"Violinplot\" represent data data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal draw_quantiles draw quantiles violinplot trim whether trim violin opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_dist.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize molecular profile in PCAWG — vis_pcawg_dist","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_pcawg_dist(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"Visualize Gene-Gene Correlation TCGA","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"","code":"vis_pcawg_gene_cor( Gene1 = \"CSF1R\", Gene2 = \"JAK3\", data_type1 = \"mRNA\", data_type2 = \"mRNA\", cor_method = \"spearman\", purity_adj = TRUE, use_log_x = FALSE, use_log_y = FALSE, use_regline = TRUE, dcc_project_code_choose = \"BLCA-US\", use_all = FALSE, filter_tumor = TRUE, alpha = 0.5, color = \"#000000\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"Gene1 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Gene2 molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type1 choose gene profile type first gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" data_type2 choose gene profile type second gene, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv_gistic2\" cor_method correlation method purity_adj whether performing partial correlation adjusted purity use_log_x TRUE, log X values. use_log_y TRUE, log Y values. use_regline TRUE, add regression line. dcc_project_code_choose select project code. use_all use sample, default FALSE. filter_tumor whether use tumor sample , default TRUE alpha dot alpha. color dot color. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_gene_cor.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene-Gene Correlation in TCGA — vis_pcawg_gene_cor","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"Visualize Single Gene Univariable Cox Result PCAWG","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"","code":"vis_pcawg_unicox_tree( Gene = \"TP53\", measure = \"OS\", data_type = \"mRNA\", use_optimal_cutoff = FALSE, values = c(\"grey\", \"#E31A1C\", \"#377DB8\"), opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). measure survival measure, e.g. \"OS\". data_type choose gene profile type, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv\" use_optimal_cutoff use surv_cutpoint survminer package thresholding samples cancer type. values color fill tumor normal opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_pcawg_unicox_tree.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Single Gene Univariable Cox Result in PCAWG — vis_pcawg_unicox_tree","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_pcawg_unicox_tree(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"Visualize molecular profile difference mutation wild status queried gene","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"","code":"vis_toil_Mut( mut_Gene = \"TP53\", Gene = NULL, data_type = NULL, Mode = c(\"Boxplot\", \"Violinplot\"), Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"mut_Gene queried gene determine grouping based mutation wild status Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type choose gene profile type, including \"mRNA\", \"transcript\", \"methylation\", \"miRNA\". Mode choose one visualize mode represent data Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill mutation wild status draw_quantiles draw quantiles violinplot trim whether trim violin opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"ggplot object tibble data.frame","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize molecular profile difference between mutation and wild status of queried gene — vis_toil_Mut","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_toil_Mut(mut_Gene = \"TP53\") p <- vis_toil_Mut(mut_Gene = \"TP53\", Gene = \"TNF\") p <- vis_toil_Mut(mut_Gene = \"TP53\", Gene = \"hsa-let-7d-3p\", data_type = \"miRNA\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"Visualize molecular profile difference mutation wild status queried gene Single Cancer Type","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"","code":"vis_toil_Mut_cancer( mut_Gene = \"TP53\", Gene = NULL, data_type = NULL, Mode = c(\"Dotplot\", \"Violinplot\"), Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, Cancer = \"ACC\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"mut_Gene queried gene determine grouping based mutation wild status Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). data_type choose gene profile type, including \"mRNA\", \"transcript\", \"methylation\", \"miRNA\". Mode choose one visualize mode represent data Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill mutation wild status draw_quantiles draw quantiles violinplot trim whether trim violin Cancer select cancer cohort(s). opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_Mut_cancer.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize molecular profile difference between mutation and wild status of queried gene in Single Cancer Type — vis_toil_Mut_cancer","text":"ggplot object tibble data.frame.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx))","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"","code":"vis_toil_TvsN( Gene = \"TP53\", Mode = c(\"Boxplot\", \"Violinplot\"), data_type = \"mRNA\", Show.P.value = TRUE, Show.P.label = TRUE, Method = c(\"wilcox.test\", \"t.test\"), values = c(\"#DF2020\", \"#DDDF21\"), TCGA.only = FALSE, draw_quantiles = c(0.25, 0.5, 0.75), trim = TRUE, include.Tumor.only = FALSE, opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Mode \"Boxplot\" \"Violinplot\" represent data data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal TCGA.include samples TCGA dataset draw_quantiles draw quantiles violinplot trim whether trim violin include.Tumor.TRUE, include \"UVM\" \"MESO\" two types matched normals samples. opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Pan-cancer TPM (tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_toil_TvsN(Gene = \"TP53\", Mode = \"Violinplot\", Show.P.value = FALSE, Show.P.label = FALSE) p <- vis_toil_TvsN(Gene = \"TP53\", Mode = \"Boxplot\", Show.P.value = FALSE, Show.P.label = FALSE) } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"Visualize Gene TPM Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx))","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"","code":"vis_toil_TvsN_cancer( Gene = \"TP53\", Mode = c(\"Violinplot\", \"Dotplot\"), data_type = \"mRNA\", Show.P.value = FALSE, Show.P.label = FALSE, Method = \"wilcox.test\", values = c(\"#DF2020\", \"#DDDF21\"), TCGA.only = FALSE, Cancer = \"ACC\", opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). Mode \"Boxplot\" \"Violinplot\" represent data data_type choose gene profile type, including \"mRNA\", \"transcript\", \"protein\", \"mutation\", \"cnv\", \"methylation\", \"miRNA\". Show.P.value TRUE FALSE whether count P value Show.P.label TRUE FALSE present p value number label *, **, *** **** Method default method wilcox.test values color fill tumor normal TCGA.include samples TCGA dataset Cancer select cancer cohort(s). opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_toil_TvsN_cancer.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Gene TPM in Single Cancer Type (Tumor (TCGA) vs Normal (TCGA & GTEx)) — vis_toil_TvsN_cancer","text":"ggplot object.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"Visualize Single Gene Univariable Cox Result Toil Data Hub","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"","code":"vis_unicox_tree( Gene = \"TP53\", measure = \"OS\", data_type = \"mRNA\", use_optimal_cutoff = FALSE, values = c(\"grey\", \"#E31A1C\", \"#377DB8\"), opt_pancan = .opt_pancan )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"Gene molecular identifier (e.g., \"TP53\") formula specifying genomic signature (\"TP53 + 2 * KRAS - 1.3 * PTEN\"). measure survival measure, e.g. \"OS\". data_type choose gene profile type, including \"mRNA\",\"transcript\",\"methylation\",\"miRNA\",\"protein\",\"cnv\" use_optimal_cutoff use surv_cutpoint survminer package thresholding samples cancer type. values color fill tumor normal opt_pancan specify one dataset molercular profiles","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"ggplot object","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/reference/vis_unicox_tree.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Single Gene Univariable Cox Result from Toil Data Hub — vis_unicox_tree","text":"","code":"if (FALSE) { # \\dontrun{ p <- vis_unicox_tree(Gene = \"TP53\") } # }"},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-220","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.2.0","title":"UCSCXenaShiny 2.2.0","text":"Added gene pathway cross-omics analysis functions/modules. Added app_run2() function custom app start lightweight modules. Fixed pdf() parameter KM plot Improved UI Custom TPC Modules. Removed mistake Yi Xiong setting problematic threshold parameter unicox analysis.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-210","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.1.0","title":"UCSCXenaShiny 2.1.0","text":"CRAN release: 2024-05-15 Handled error raised due internet issue CRAN check. Optimized data preloading Shiny application. Dockerfile updated.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-201","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.0.1","title":"UCSCXenaShiny 2.0.1","text":"Fixed minor bugs Shiny app. Updated README Docker usage. Fixed issue vis_identifier_grp_comparison() (#317).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-200","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 2.0.0","title":"UCSCXenaShiny 2.0.0","text":"CRAN release: 2024-03-14 See UCSCXenaShiny v2 Book comprehensive guidance.","code":""},{"path":[]},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"datasets-2-0-0","dir":"Changelog","previous_headings":"New Features","what":"Datasets","title":"UCSCXenaShiny 2.0.0","text":"load_data(\"tcga_PW\"): ssGSEA scores HALLMARK, KEGG, IOBR terms TCGA samples. load_data(\"tcga_PW_meta\"): metadata annotation HALLMARK, KEGG, IOBR terms. load_data(\"pcawg_TIL\"): PCAWG TIL data. load_data(\"pcawg_PW\"): ssGSEA scores HALLMARK, KEGG, IOBR terms PCAWG samples. .","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"r-package-functions-2-0-0","dir":"Changelog","previous_headings":"New Features","what":"R Package Functions","title":"UCSCXenaShiny 2.0.0","text":".opt_pancan : Default setting alternative TPC datasets. mol_quick_analysis(): Quick molecule analysis report generation based TCGA dataset. query_tcga_group(): Group TPC samples build-custom phenotype support filtering merging operations. vis_dim_dist(): Visualize distribution difference TCGA samples dimensionality reduction analysis. vis_identifier_dim_dist(): Visualize distribution difference samples Molecule Identifier dimensionality reduction analysis. vis_toil_Mut(): Visualize molecular profile difference mutation wild status queried gene. vis_toil_Mut_cancer(): Visualize molecular profile difference mutation wild status queried gene Single Cancer Type","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"shiny-application-2-0-0","dir":"Changelog","previous_headings":"New Features","what":"Shiny application","title":"UCSCXenaShiny 2.0.0","text":"Homepage Added slicker gallery display page summary; Added report generation TCGA pan-cancer exploration. General Dataset Analysis Added one general dimensionality reduction analysis module. Quick TPC Analysis Added one module association analysis molecule pathway; Added one module association analysis molecule mutation; Added one module dimensionality reduction analysis. Personalized Analysis Designed personalized TPC analysis pipelines based 3 methods 3 modes. Download Added two modules exact subset integrated TPC data UCSCXena datasets.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"enhancements-2-0-0","dir":"Changelog","previous_headings":"","what":"Enhancements","title":"UCSCXenaShiny 2.0.0","text":"Supported getting flexible methylation value. Supported installing package r-universe (https://openbiox.r-universe.dev/UCSCXenaShiny). Supported alternative molecular profiling datasets quick personalized TPC analysis.","code":"UCSCXenaShiny::get_pancan_methylation_value( \"RCAN2\", rule_out = c(\"cg21115430\", \"cg19452802\"), aggr = \"Q75\" )"},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"bug-fixes-2-0-0","dir":"Changelog","previous_headings":"","what":"Bug Fixes","title":"UCSCXenaShiny 2.0.0","text":"Merged data unequal size pan-cancer data query gene signature (#283), fix also enhance sample names match. Test code:","code":"vis_gene_tmb_cor(\"`ZFAT-AS1` + `SNORD116-1` + SPATA31D1\", data_type = \"methylation\")"},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-1111","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.11","title":"UCSCXenaShiny 1.1.11","text":"Fixed check warning pan-cancer radar plot.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-1110","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.10","title":"UCSCXenaShiny 1.1.10","text":"CRAN release: 2023-02-28 Fixed check issue due internet access (#253).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-119","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.9","title":"UCSCXenaShiny 1.1.9","text":"CRAN release: 2022-12-12 Added cancer type control PCAWG survival analysis. Added TCGA batch id MDA.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-118","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.8","title":"UCSCXenaShiny 1.1.8","text":"CRAN release: 2022-06-07 Fixed issue set mislabelled color pcawg pan-cancer analysis (#247, Thanks Tangjian Li). Fixed issue querying gene signature general analysis page (#244). Fixed issue “Radar plot “stemness” plot “ACC” tumor type” (#242).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-117","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.7","title":"UCSCXenaShiny 1.1.7","text":"CRAN release: 2022-04-13 Added option include.Tumor.control include type Set default theme flatly available. Added example generate radar plot, close #239","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-116","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.6","title":"UCSCXenaShiny 1.1.6","text":"Added description extra datasets.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-115","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.5","title":"UCSCXenaShiny 1.1.5","text":"CRAN release: 2022-01-15 Fixed survival KM plot output issue due ggsave() failure General Analysis page. (#230)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-114","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.4","title":"UCSCXenaShiny 1.1.4","text":"CRAN release: 2021-12-13 Fixed colnames changed .data.frame() querying symbol unvalid R name. (Related #234) Added informative error scatter plot General Analysis tab. (#233) Reversed default color setting groups survival analysis fit conventional color grouping (Xena). (#232, thanks feedback Enrique) Supported known science palette custom colors survival analysis Quick PanCan Analysis tab.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-113","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.3","title":"UCSCXenaShiny 1.1.3","text":"CRAN release: 2021-11-29 Data check. (#225) Fixed survival KM plot output issue due ggsave() failure. (#230)","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-112","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.2","title":"UCSCXenaShiny 1.1.2","text":"CRAN release: 2021-11-17 Fixed value query gene signature purrr lambda function. Updated dataset doc. Uploaded zenodo link. Uploaded tool conda forge, user can install conda now. details, please read README file.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-111","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.1","title":"UCSCXenaShiny 1.1.1","text":"CRAN release: 2021-07-30 Updated citation. Fixed data loading bug due function scope problem (#222).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-110","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.1.0","title":"UCSCXenaShiny 1.1.0","text":"CRAN release: 2021-07-16 Supported uploading data files analysis. Improved user experience. Added contents README. Corrected LICENSE (package built top code GPLv3 LICENCE). Added docker image UCSCXenaShiny https://hub.docker.com/r/shixiangwang/ucscxenashiny.","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-101","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.0.1","title":"UCSCXenaShiny 1.0.1","text":"CRAN release: 2021-06-23 Added package doc site link usage navbar list. Fixed bug PCAWG survival analysis (#209).","code":""},{"path":"https://openbiox.github.io/UCSCXenaShiny/news/index.html","id":"ucscxenashiny-100","dir":"Changelog","previous_headings":"","what":"UCSCXenaShiny 1.0.0","title":"UCSCXenaShiny 1.0.0","text":"CRAN release: 2021-05-16 first stable formal version UCSCXenaShiny. refactored whole R package corresponding Shiny service. Enjoy .","code":""}]