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contig names: chr_ or _ #1

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plantimals opened this issue Aug 31, 2019 · 0 comments
Open

contig names: chr_ or _ #1

plantimals opened this issue Aug 31, 2019 · 0 comments
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question Further information is requested

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@plantimals
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This is one of the great disconnects of bioinformatics: contig names of chr1 vs 1

I'm fine with either. some datasets use the bare numbers and MT for mitochondria, or chr_ and chrM for mitochondria.

It doesn't make much difference to the analysis, we just need to pick one. Does anyone have a specific preference?
@plantimals plantimals added the question Further information is requested label Aug 31, 2019
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