Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

add 'synapses restricted to region' #755

Open
wants to merge 18 commits into
base: master
Choose a base branch
from
Open

add 'synapses restricted to region' #755

Changes from all commits
Commits
Show all changes
18 commits
Select commit Hold shift + click to select a range
666e6bd
add synapses_restricted_to_region
Clare72 Aug 17, 2023
acf8f8d
add example of usage
Clare72 Aug 18, 2023
3029a67
add property chain
Clare72 Aug 18, 2023
d1d3201
Merge branch 'master' into synapses_restricted_to_region
Clare72 Aug 18, 2023
2998a24
amend creation annotations
Clare72 Aug 18, 2023
e98463a
Merge branch 'master' into synapses_restricted_to_region
Aug 18, 2023
1a2743d
making requested definition and comment fixes
Clare72 Sep 12, 2023
9fc674b
Merge branch 'master' into synapses_restricted_to_region
Clare72 Nov 2, 2023
fcf362a
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 1, 2024
b78074a
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 5, 2024
8a4307b
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 7, 2024
bca3793
use `terms:contributor` instead of `terms:creator`
anitacaron Feb 9, 2024
dfccb07
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 12, 2024
ae71628
Merge branch 'master' into synapses_restricted_to_region
Clare72 Feb 12, 2024
09fb9ed
Merge branch 'master' into synapses_restricted_to_region
Clare72 Mar 22, 2024
7b4c1e0
Merge branch 'master' into synapses_restricted_to_region
Clare72 Jun 21, 2024
055cd8d
Merge branch 'master' into synapses_restricted_to_region
Clare72 Oct 14, 2024
9ac1803
Merge branch 'master' into synapses_restricted_to_region
Clare72 Nov 5, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
13 changes: 13 additions & 0 deletions src/ontology/ro-edit.owl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -562,6 +562,7 @@ Declaration(ObjectProperty(obo:RO_0013006))
Declaration(ObjectProperty(obo:RO_0013007))
Declaration(ObjectProperty(obo:RO_0013008))
Declaration(ObjectProperty(obo:RO_0013009))
Declaration(ObjectProperty(obo:RO_0013010))
Declaration(ObjectProperty(obo:RO_0014001))
Declaration(ObjectProperty(obo:RO_0015001))
Declaration(ObjectProperty(obo:RO_0015002))
Expand Down Expand Up @@ -6460,6 +6461,17 @@ AnnotationAssertion(rdfs:comment obo:RO_0013009 "Not restricting range to 'cell'
AnnotationAssertion(rdfs:label obo:RO_0013009 "sends synaptic output to cell"@en)
SubObjectPropertyOf(obo:RO_0013009 obo:RO_0002120)

# Object Property: obo:RO_0013010 (synapses restricted to region)

AnnotationAssertion(obo:IAO_0000112 obo:RO_0013010 "An optic lobe intrinsic neuron has its synapses restricted to optic lobe neuropil.")
AnnotationAssertion(obo:IAO_0000115 obo:RO_0013010 "A relationship between a neuron and a region, where all of the functionally relevant input and output synapses are in that region.")
AnnotationAssertion(terms:contributor obo:RO_0013010 <https://orcid.org/0000-0002-1373-1705>)
AnnotationAssertion(terms:date obo:RO_0013010 "2023-08-17T12:17:24Z"^^xsd:dateTime)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:RO_0013010 "intrinsic to")
AnnotationAssertion(rdfs:comment obo:RO_0013010 "This relation may still be used if a very small number of synapses fall slightly outside the boundaries of the region, but any class using this relation should not have another restriction using this relation to another non-overlapping region.")
AnnotationAssertion(rdfs:label obo:RO_0013010 "synapses restricted to region"@en)
SubObjectPropertyOf(obo:RO_0013010 obo:RO_0013001)

anitacaron marked this conversation as resolved.
Show resolved Hide resolved
# Object Property: obo:RO_0014001 (disease has infectious agent)

AnnotationAssertion(obo:IAO_0000115 obo:RO_0014001 "A relationship between a disease and an infectious agent where the material basis of the disease is an infection with some infectious agent.")
Expand Down Expand Up @@ -7301,6 +7313,7 @@ SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013001 obo:BFO_0000050) obo:RO_0
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013002 obo:BFO_0000050) obo:RO_0013002)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013003 obo:BFO_0000050) obo:RO_0013003)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013007 obo:BFO_0000050) obo:RO_0013007)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013010 obo:BFO_0000050) obo:RO_0013010)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0015001 obo:RO_0015003) obo:RO_0015001)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0020104 obo:BFO_0000050 obo:RO_0020105) obo:RO_0002100)
SubObjectPropertyOf(ObjectPropertyChain(ObjectInverseOf(obo:BFO_0000066) obo:RO_0002234) obo:RO_0003000)
Expand Down
Loading