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sibo-edit.obo
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format-version: 1.2
default-namespace: sibo
remark: The Social Insect Behavior Ontology (SIBO) was created by Chris Smith. This ontology will eventually be integrated into the NBO ando contains collected terms for Chemical, Anatomy, Behavior, Species. The most developed use cases are for Pogonomyrmex harvester ant foraging and apis mellifera honeybee colony defense.
ontology: sibo
[Term]
id: NCBITaxon:7460
name: Apis mellifera
is_a: SIBO:0000477 ! Species
created_by: cdsmith
creation_date: 2007-10-18T01:36:00Z
[Term]
id: SIBO:0000000
name: beta-elemene
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000461 ! Solenopsis geminata
[Term]
id: SIBO:0000001
name: Glycerol
def: "Profile of ant-derived compounds in silica gel nesting material." [ChEBI:17754, DOI:10.1007/s10886-006-9249-y]
comment: Sample Type: Silica gel with excreta.\nAnalysis Method: No extraction with derivatization.\nCompound Name: Glycerol\nSource of Standard: Sigma-Aldrich.\nSample Type-2: Silica gel in bottles or vials.\nAnalysis Method-2: Water extraction with derivatization.\nCompound Name-2: Glycerol\nSource of Standard-2: Sigma-Aldrich.
is_a: SIBO:0000478 ! Alcohol
relationship: associated_with_behavior SIBO:0000230 ! Alarm
relationship: derived_from SIBO:0000258 ! Mandibular gland
relationship: is_relevant_for SIBO:0000382 ! Crematogaster sjostedti
[Term]
id: SIBO:0000002
name: Organic Compound
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000003
name: Urea
def: "Profile of ant-derived compounds in silica gel nesting material." [DOI:10.1007/s10886-006-9249-y]
comment: Sample Type: Silica gel with excreta.\nAnalysis Method: No extraction with derivatization.\nCompound Name: Urea.\nSource of Standard: Alfa Aesar.
synonym: "Carbamide" EXACT [KEGG.COMPOUND:C00086]
is_a: SIBO:0000002 ! Organic Compound
[Term]
id: SIBO:0000005
name: 2-Quinolinecarbixylic acid
def: "Profile of ant-derived compounds in silica gel nesting material." [DOI:10.1007/s10886-006-9249-y]
comment: Sample Type: Silica gel with excreta.\nAnalysis Method: No extraction with derivatization.\nCompound Name: 2-Quinolinecarbixylic acid.\nSource of Standard: Sigma-Aldrich.
is_a: SIBO:0000178 ! Organic Acids
[Term]
id: SIBO:0000006
name: n-Decane
comment: Glandular Source:Dufour's.
is_a: SIBO:0000150 ! Hydrocarbons
[Term]
id: SIBO:0000009
name: Formic acid
def: "Formic acid." [ChEBI:30751]
comment: Glandular source: Poison.
is_a: SIBO:0000159 ! Carboxylic acids
relationship: associated_with_behavior SIBO:0000145 ! Defense
relationship: derived_from SIBO:0000259 ! Poison gland
[Term]
id: SIBO:0000010
name: 3-Octanol
def: "3-Octanol." [Book:0674040759]
comment: Glandular Source:Mandibular.
is_a: SIBO:0000478 ! Alcohol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000011
name: 3-Decanol
def: "3-Decanol." [Book:0674040759]
comment: Glandular Source:Mandibular.
is_a: SIBO:0000478 ! Alcohol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000012
name: 6-Methyl-5-hepten-2-ol
def: "6-Methyl-5-hepten-2-ol." [Book:0674040759]
comment: Glandular Source:Pygidal.
is_a: SIBO:0000478 ! Alcohol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000013
name: 4-Heptanol
def: "4-Heptanol." [Book:0674040759]
comment: Glandular Source:Mandibular.
is_a: SIBO:0000478 ! Alcohol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000014
name: 4-Methyl-3-heptanol
def: "4-Methyl-3-heptanol." [Book:0674040759]
comment: Glandular Source:Mandibular.
is_a: SIBO:0000478 ! Alcohol
relationship: derived_from SIBO:0000255 ! Pygidial gland
[Term]
id: SIBO:0000015
name: 1-Hexanol
def: "1-Hexanol." [Book:0674040759]
comment: Glandular Source:Mandibular.
is_a: SIBO:0000478 ! Alcohol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000016
name: 2-Hexanal
def: "2-Hexanal." [Book:0674040759]
is_a: SIBO:0000144 ! R-dodecan-2-ol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000018
name: 2-Butyl-2-octenal
def: "2-Butyl-2-octenal." [Book:0674040759]
is_a: SIBO:0000144 ! R-dodecan-2-ol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000020
name: Hexanal
def: "Hexanal." [Book:0674040759]
is_a: SIBO:0000144 ! R-dodecan-2-ol
relationship: derived_from SIBO:0000254 ! Cephalic gland
[Term]
id: SIBO:0000021
name: 2-Methyl-4-heptanone
def: "2-Methyl-4-heptanone." [Book:0674040759]
comment: Glandular Source:Pygidial.
is_a: SIBO:0000160 ! S-octan-3-ol
relationship: derived_from SIBO:0000255 ! Pygidial gland
[Term]
id: SIBO:0000022
name: 4-Heptanone
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000023
name: 3-Decanone
def: "3-Decanone." [Book:0674040759]
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000024
name: 2-Heptanone
def: "2-Heptanone." [Book:0674040759]
comment: Glandular Source:Madibular.
is_a: SIBO:0000160 ! S-octan-3-ol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000025
name: 4,6-Dimethyl-4-octen-3-one
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000026
name: 4-Methyl-2-hexanone
comment: Glandular Source:Pyidial.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000027
name: 6-Methyl-5-hepten-2-one
comment: Glandular Source:Pygidial.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000028
name: 5-Methyl-3-heptanone
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000029
name: 4-Methyl-3-heptanone
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000030
name: 2-Tridecanone
def: "2-Tridecanone." [Book:0674040759]
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
relationship: derived_from SIBO:0000261 ! Dufour's gland
[Term]
id: SIBO:0000031
name: 3-Octanone
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
relationship: derived_from SIBO:0000258 ! Mandibular gland
[Term]
id: SIBO:0000032
name: 3-Nonanone
comment: Glandular Source:Mandibular.
is_a: SIBO:0000160 ! S-octan-3-ol
[Term]
id: SIBO:0000033
name: Carboxylic acids
is_obsolete: true
[Term]
id: SIBO:0000034
name: bvc
is_obsolete: true
[Term]
id: SIBO:0000035
name: 2-Acetyl-3-methylcyclopentene
comment: Glandular Source:Pygidial.
is_a: SIBO:0000161 ! Cyclic ketone
[Term]
id: SIBO:0000037
name: cis-1-Acetyl-2-methylcyclopentane
comment: Glandular Source:Pygidial.
is_a: SIBO:0000161 ! Cyclic ketone
[Term]
id: SIBO:0000039
name: 2-Methylcyclopentanone
comment: Glandular Source:Pygidial.
is_a: SIBO:0000161 ! Cyclic ketone
[Term]
id: SIBO:0000042
name: Methyl anthranilate
comment: Glandular Source:Cephalic.
is_a: SIBO:0000162 ! Esters
[Term]
id: SIBO:0000043
name: Dodecyl acetate
comment: Glandular Source:Dufour's.
is_a: SIBO:0000162 ! Esters
[Term]
id: SIBO:0000044
name: Decyl acetate
comment: Glandular Source:Dufour's.
is_a: SIBO:0000162 ! Esters
[Term]
id: SIBO:0000045
name: Methyl 6-methylsalicylate
comment: Glandular Source:Cephalic.
is_a: SIBO:0000162 ! Esters
[Term]
id: SIBO:0000046
name: Tetradecyl acetate
comment: Glandular Source:Dufour's.
is_a: SIBO:0000162 ! Esters
[Term]
id: SIBO:0000047
name: delta1-15Hy
is_a: SIBO:0000150 ! Hydrocarbons
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000461 ! Solenopsis geminata
[Term]
id: SIBO:0000048
name: Invictolide
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000461 ! Solenopsis geminata
[Term]
id: SIBO:0000049
name: beta-selinene
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000461 ! Solenopsis geminata
[Term]
id: SIBO:0000050
name: alpha-selinene
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000461 ! Solenopsis geminata
[Term]
id: SIBO:0000051
name: 6-E1-pentenyl-2-pyranone
is_a: SIBO:0000143 ! Semiochemical
relationship: associated_with_behavior SIBO:0000439 ! Recognition
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000461 ! Solenopsis geminata
relationship: is_relevant_for SIBO:0000462 ! Solenopsis invicta
[Term]
id: SIBO:0000052
name: Z,Z-alpha-homofarnesene
is_a: SIBO:0000143 ! Semiochemical
relationship: is_relevant_for SIBO:0000462 ! Solenopsis invicta
[Term]
id: SIBO:0000053
name: E,E-alpha-farnesene
is_a: SIBO:0000143 ! Semiochemical
relationship: is_relevant_for SIBO:0000462 ! Solenopsis invicta
[Term]
id: SIBO:0000054
name: Bee colony defense
is_a: SIBO:0000516 ! Colony Defense
relationship: is_relevant_for NCBITaxon:7460 ! Apis mellifera
[Term]
id: SIBO:0000055
name: perception of threat
is_a: SIBO:0000054 ! Bee colony defense
relationship: precedes SIBO:0000069 ! Orientation
relationship: precedes SIBO:0000075 ! Disengagement
[Term]
id: SIBO:0000056
name: Z,E-alpha-homofarnesene
is_a: SIBO:0000143 ! Semiochemical
relationship: is_relevant_for SIBO:0000462 ! Solenopsis invicta
[Term]
id: SIBO:0000057
name: Triolein
is_a: SIBO:0000143 ! Semiochemical
relationship: associated_with_behavior SIBO:0000439 ! Recognition
relationship: is_relevant_for SIBO:0000462 ! Solenopsis invicta
[Term]
id: SIBO:0000058
name: 2S6S-2me-6-undecylpiperidine
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000461 ! Solenopsis geminata
relationship: is_relevant_for SIBO:0000462 ! Solenopsis invicta
relationship: is_relevant_for SIBO:0000466 ! Solenopsis richteri
relationship: is_relevant_for SIBO:0000469 ! Solenopsis xyloni
[Term]
id: SIBO:0000059
name: Z5Z9-3-butyl-5me-octahydroindolizine
is_a: SIBO:0000143 ! Semiochemical
relationship: associated_with_behavior SIBO:0000145 ! Defense
relationship: is_relevant_for SIBO:0000463 ! Solenopsis maboya
[Term]
id: SIBO:0000060
name: E5E9-3-butyl-5me-octahydroindolizine
is_a: SIBO:0000143 ! Semiochemical
relationship: associated_with_behavior SIBO:0000145 ! Defense
relationship: is_relevant_for SIBO:0000463 ! Solenopsis maboya
[Term]
id: SIBO:0000061
name: 2S6R-2-me-6-heptylpiperidine
def: "2S6R-2-me-6-heptylpiperidine (The Pherobase: Database of Insect Phermones and Semiochemicals:El-Sayed AM." []
is_a: SIBO:0000143 ! Semiochemical
is_a: SIBO:0000225 ! Allomones
relationship: associated_with_behavior SIBO:0000145 ! Defense
relationship: is_relevant_for SIBO:0000463 ! Solenopsis maboya
[Term]
id: SIBO:0000062
name: E5E9-3-hexyl-5-methylindolizidine
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000464 ! Solenopsis molesta
[Term]
id: SIBO:0000063
name: Z5E9-3-hexyl-5-methylindolizidine
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000464 ! Solenopsis molesta
relationship: is_relevant_for SIBO:0000467 ! Solenopsis sp
[Term]
id: SIBO:0000064
name: Z5E8-3-heptyl-5me-pyrrolizidine
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000468 ! Solenopsis tennesseensis
[Term]
id: SIBO:0000065
name: 2me-6-Z4-nonylpiperidine
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000467 ! Solenopsis sp
[Term]
id: SIBO:0000066
name: Z5Z9-3-butyl-5-propylindolizidine
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000467 ! Solenopsis sp
[Term]
id: SIBO:0000067
name: E5E9-3-butyl-5-propylindolizidine
is_a: SIBO:0000143 ! Semiochemical
relationship: derived_from SIBO:0000259 ! Poison gland
relationship: is_relevant_for SIBO:0000467 ! Solenopsis sp
[Term]
id: SIBO:0000068
name: Discrimination or Identificiation
is_a: SIBO:0000054 ! Bee colony defense
relationship: precedes SIBO:0000073 ! Alert
relationship: precedes SIBO:0000075 ! Disengagement
[Term]
id: SIBO:0000069
name: Orientation
is_a: SIBO:0000054 ! Bee colony defense
relationship: precedes SIBO:0000068 ! Discrimination or Identificiation
relationship: precedes SIBO:0000075 ! Disengagement
[Term]
id: SIBO:0000070
name: new2
is_obsolete: true
[Term]
id: SIBO:0000071
name: Approach
is_a: SIBO:0000054 ! Bee colony defense
relationship: precedes SIBO:0000072 ! Secondary perception and discrimination or identification
relationship: precedes SIBO:0000075 ! Disengagement
[Term]
id: SIBO:0000072
name: Secondary perception and discrimination or identification
is_a: SIBO:0000054 ! Bee colony defense
relationship: precedes SIBO:0000075 ! Disengagement
relationship: precedes SIBO:0000076 ! Threat
relationship: precedes SIBO:0000233 ! Attack
[Term]
id: SIBO:0000073
name: Alert
is_a: SIBO:0000054 ! Bee colony defense
relationship: precedes SIBO:0000071 ! Approach
relationship: precedes SIBO:0000075 ! Disengagement
relationship: precedes SIBO:0000442 ! Recruitment
[Term]
id: SIBO:0000075
name: Disengagement
is_a: SIBO:0000054 ! Bee colony defense
[Term]
id: SIBO:0000076
name: Threat
is_a: SIBO:0000054 ! Bee colony defense
relationship: precedes SIBO:0000075 ! Disengagement
relationship: precedes SIBO:0000233 ! Attack
[Term]
id: SIBO:0000077
name: 4Rme-7-3Kt
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000078
name: katepisternum
is_obsolete: true
[Term]
id: SIBO:0000079
name: apical tooth of mandible
def: "Apical margin/tooth- See Mandibles" [SIBO:csmith]
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000080
name: anterior tentorial pit
def: "Anterior tentorial pits- A pair of pits of impressions located anteriorly on the dorsal surface of the head, at or very close to the posterior clypeal margin. The pits indicate the points of attachment of the anterior arms of the internal skeleton (tentorium) of the head to head capsule. The termination of the posterior arms of the tentorium are marked by a pair of posterior tentorial pits, which are located close to the occipital foramen (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000081
name: basal angle of mandible
def: "Basal angle/ lamella/ margin tooth- See Mandibles (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222.)" []
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000082
name: basal tooth of mandible
def: "Basal angle/ lamella/ margin tooth- See Mandibles (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000083
name: diastema
def: "Diastema- See Mandibles (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000084
name: denticle
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000085
name: frontal carina
def: "Frontal carinae- A pair of longitudinal ridges on the head, located dorsally behind the clypeus and between the antennal sockets. They are very variable in the length and strength of development, frequently being short and simple but sometimes extending back to the occipital margin of the head. In some groups the frontal carina are vestigial or absent, but elsewhere they may be strongly developed or form the dorsal margins of extensive antennal scrobes. Commonly the frontal carinae anteriorly are expanded into progecting lobate extensions, the frontal lobes, which partially or entirely cover and conceal the antennal sockets. Frontal lobes may be the only expression of the frontal carinae in some groups. Sometimes the portions of the torulus closets to the cephalic midline is raised and expanded into a small, laterally projecting lobe, which may extend beyond the lateral margin of the frontal carina or lobe. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
synonym: "Frontal lobes" RELATED []
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000086
name: eye
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000087
name: fronto-clypeal suture
def: "Fronto-clypeal suture- The suture forming the posterior margin or boundary of the clypeusl frequently referred to as the posterios clypeal margin. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000088
name: frontal triangle
def: "Frontal triangle- A small triangular patch of the cuticle located mediodorsally on the head immediately behind the clypeus and approximately between the antennal sockets or anterior parts of the frontal carinae in many ant taxa. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000089
name: frontal lobe
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000090
name: gena
def: "Gena- Area of front of head bounded in front by the posterior margin of he clypeus, behind by the anterior margin of the eye, and medially by the antennal socket. The gena thus includes part of the cephalic dorsum and the side of the head capsule between the eye and the clypeus. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: adjacent_to SIBO:0000112 ! head
[Term]
id: SIBO:0000091
name: funiculus of antenna
relationship: part_of SIBO:0000097 ! antenna
[Term]
id: SIBO:0000092
name: lateral portion of clypeus
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000093
name: apical margin of mandible
def: "Apical margin/tooth- See Mandibles (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000094
name: basal margin of mandible
def: "Basal angle/ lamella/ margin tooth- See Mandibles (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000095
name: external margin of mandible
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000096
name: median portion of clypeus
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000097
name: antenna
def: "Antenna- The antenna in ants consists of an elongate basal segment, the scape, followed distally by 3-11 smaller segments which together constitute the funiculus (=flagellum), giving a total antennal segement count (=antennomere count) of 4 to12. The scape articulates with the head in the antennal socket (=antennal insertion), a foramen located behind the clypeus. The antennal socket itself is enriched by a narrow annular sclerite, the torulus, and may be overhung and concealed by the frontal lobe. At the base of the scape is a ball-like condylar bulb (=articulatory bulb), the part which actually articulates within the socket. Just distal of the condylar bulb is a short constriction of neck, which may be straight or curved, beyond which the scape shaft proper commences. The funicular segments may be filiform or the apical 1-4 may be enlarged to form a club. See also frontal carinae, torulus. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: adjacent_to SIBO:0000107 ! antennal socket
created_by: cdsmith
creation_date: 2007-10-27T12:34:00Z
[Term]
id: SIBO:0000098
name: occipital margin of head
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000099
name: scape of antenna
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000100
name: antennal scrobe
def: "A groove, impresison, or excavation in the sie of the head, which runs above or below the eye, to accomidate at least the antennal scape, but often the entire antenna, when the latter folded back. Antennal scrobes vary in development form simple broad shallow groves to extensive deep trenches. Antennal scrobes are abesent from most any genera." [Bolton Glossary:<new dbxref>]
relationship: part_of SIBO:0000097 ! antenna
[Term]
id: SIBO:0000101
name: tooth number
relationship: part_of SIBO:0000120 ! mandible
[Term]
id: SIBO:0000102
name: torulus
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000103
name: trulleum
is_obsolete: true
[Term]
id: SIBO:0000104
name: anepisternum
relationship: part_of SIBO:0000116 ! mesopleuron
[Term]
id: SIBO:0000105
name: mesosoma
def: "Second visible tagma of an ants body following the head. Morphologically the Alitrunk consists of the three segments of the true thorax (pro-, meso-, and metathorax) to which is fused the propodeum, the tergite of the first abdominal segment to form a signal unit. See also Abdomen, Propodeum, Thorax. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
synonym: "alitrunk" RELATED []
is_a: SIBO:0000149 ! Anatomical part
[Term]
id: SIBO:0000106
name: pollen sac
is_a: SIBO:0000149 ! Anatomical part
relationship: associated_with_behavior SIBO:0000519 ! pollen foraging
relationship: is_relevant_for NCBITaxon:7460 ! Apis mellifera
created_by: cdsmith
creation_date: 2008-06-07T10:38:00Z
[Term]
id: SIBO:0000107
name: antennal socket
def: "Antennal socket/ insertion- See Antenna (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000108
name: helcium
def: "Helcium- The very reduced and specialized presclerites of abdominal segment 3, which form a complex articulation within the posterior foramen of the petiole. In general the helcium is mostly or entirely concealed within the posterior orifice of the petiole, but in certain groups it is partly visible. Disarticulation of abdominal segments 2 and 3 is necessary to examine the structure and its variation in detail. See also Abdomen. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000129 ! waist
[Term]
id: SIBO:0000109
name: coxa number
def: "Femur- The third segment of any leg, counting from the basal coxal segment that articulates with the alitrunk. The femur is generally the longest leg segment and is separted from the coxa only by a small segment, the trochanter.\n\nLeg segments- Each leg consists of a basal coax that articulated with the alitrucnk, followed in order by a small trochanter, a long and generally stouct fentur, a tibia, and a tarsus, the last consisting of five small segments and terminating apically in a pair of claws. The prefixes pro-, meso-, and meta-, applied to any of these terms, indicate that segment on the left of a particular thoracic segment. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
synonym: "Leg segments" RELATED []
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000110
name: gastral segment number
relationship: part_of SIBO:0000113 ! gaster
[Term]
id: SIBO:0000111
name: declivity of propodeum
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000112
name: head
def: "Clypeus- Anterior sclerite of the dorsal head, bounded posteriorly by the fronto-clypeal suture, which is also very commonly called the posterior clypeal margin or border. The anteriof clypeal margin usually forms the anterior margin of the head in full-face biew (but a projection of the labrum may be anterior to the clypeus in some taxa). The body of the clypeus consists of a pair of lateral portions, or narrow bands of cuticle, on each side of a shield-like median portion. The median portion of the clypeus may be equipped with one or more longitudinal carinae, or may be variously specialized in shape. Posteriorly the median portion of the clypeus may end in form of the antennal sockets/frontal carinae or lobes, or may project backwards between them. In some taxa the clypeus is very reduced and extremely narrow from front to back. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
synonym: "Caphalic" RELATED []
is_a: SIBO:0000149 ! Anatomical part
[Term]
id: SIBO:0000113
name: gaster
relationship: part_of SIBO:0000140 ! metasoma
[Term]
id: SIBO:0000114
name: mesonotum
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000115
name: metanotal groove
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000116
name: mesopleuron
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000117
name: metapleuron
synonym: "anepisternum " RELATED []
synonym: "katepisternum" RELATED []
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000118
name: orifice of metalpleural gland
relationship: part_of SIBO:0000130 ! promesonotum
[Term]
id: SIBO:0000119
name: metapleural gland bulla
relationship: part_of SIBO:0000270 ! Metapleural gland
[Term]
id: SIBO:0000120
name: mandible
def: "Mandibles- The appendages with which ants manipulate their environment. They are very variable in shape, size, and dentition, and extremely important in ant taxonomy. \nMargins- In full-face view, with the mandibles closed, the inner margin or border (closest to an anterior extension of the midline of the head) of each mandibular blade is the apical margin (masticatory margin), and is usually armed with teeth. Proximally, close to the anterior margin of the clypeus, the apical margin usually passes through a basal angle into a transverse or oblique basal margin. The two margins may join through a broad or narrow curve, or meet in an angle or tooth. When the mandibles are narrow of linear, the distinction between the apical and basal margins may be lost by obliteration of the basal angle. The external margin (lateral margin) of each mandible forms its outer border in full-face view and may be straight, sinuate, or convex. \n\nDentition- The aprical margin of each mandible is usually armed with a series of teeth or denticles (short or very reduced acute teeth) or both, which generally run the length of the apical margin. If teeth alone are present, or a combination of teeth and denticles, the mandible is denate. If only tiny dentricles occur the mandible is denticulate, and if the margin lacks armament it is edentate. A natural gap in a row of teeth is a diastema and an elongate mandible with an uninterrupted series of teeth may be described as serially dentate. Teeth are usually sharp and triangular in shape but may be rounded, long, narrow, and spine-like, or peg-like. Reduced teeth or dentivles that occur between full-sized teeth are intercalary. In general the first, distalmost, or apical tooth, the one farthest away from the anterior clypeal margin, is the largest on the apical margin, although in some taxa medial or basal teeth may be the largest. The tooth at or near of the basal angle is the basal tooth the tooth immediately behind the apical may be termed the preapical, though this term may be (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
synonym: "Apical margin tooth" RELATED []
synonym: "Apical tooth" RELATED []
synonym: "Debtate/Denticle/ Denticulate" RELATED []
synonym: "Diastema" RELATED []
synonym: "Edentate" RELATED []
synonym: "Elonaget Triangular" RELATED []
synonym: "External margin" RELATED []
synonym: "Falcate" RELATED []
synonym: "Linear" RELATED []
relationship: part_of SIBO:0000112 ! head
[Term]
id: SIBO:0000121
name: propodeum
is_obsolete: true
[Term]
id: SIBO:0000122
name: pronotum
def: "Pronotum- See Tergite (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000123
name: peduncle of petiole
relationship: part_of SIBO:0000126 ! petiole
[Term]
id: SIBO:0000124
name: promesonotal suture
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000125
name: propodeal lobe
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000126
name: petiole
def: "Petiole- The second abdominal segment immediately following the alitrunk, which is usually reduced and always isolated. Generally the petiole takes the form of a node or of a scale of varying shape and size, but in some taxa it may be very reduced, represented by only a narrow, subcylindrical segment that may be overhung and concealed by the gaster. The petiole bears the second abdominal spiracle and usually consists of a distinct tergite and sternite. The former may have differentiated laterotergites low down on the side. In some groups the petiolar tergite and sternite have fused together. See also Abdomen, Peduncle. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
synonym: "subsessile" RELATED []
relationship: part_of SIBO:0000129 ! waist
[Term]
id: SIBO:0000127
name: tergite
relationship: part_of SIBO:0000113 ! gaster
relationship: part_of SIBO:0000496 ! abdominal segment number 3
relationship: part_of SIBO:0000497 ! abdominal segment number 4
[Term]
id: SIBO:0000128
name: postperiole
is_obsolete: true
[Term]
id: SIBO:0000129
name: waist
relationship: part_of SIBO:0000140 ! metasoma
[Term]
id: SIBO:0000130
name: promesonotum
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000131
name: propleuron
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000132
name: spiracle
relationship: part_of SIBO:0000105 ! mesosoma
[Term]
id: SIBO:0000133
name: sternite
is_a: SIBO:0000149 ! Anatomical part
relationship: part_of SIBO:0000496 ! abdominal segment number 3
relationship: part_of SIBO:0000497 ! abdominal segment number 4
[Term]
id: SIBO:0000134
name: pygidium
is_obsolete: true
[Term]
id: SIBO:0000135
name: girdling constriction
relationship: part_of SIBO:0000113 ! gaster
[Term]
id: SIBO:0000136
name: alitrunk
def: "Second visible tagma of an ants body following the head. Morphologically the Alitrunk consists of the three segments of the true thorax (pro-, meso-, and metathorax) to which is fused the propodeum, the tergite of the first abdominal segment to form a signal unit. See also Abdomen, Propodeum, Thorax. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
is_obsolete: true
[Term]
id: SIBO:0000137
name: sting
relationship: associated_with_behavior SIBO:0000233 ! Attack
relationship: part_of SIBO:0000113 ! gaster
[Term]
id: SIBO:0000138
name: tooth number 2
is_a: SIBO:0000101 ! tooth number
created_by: ilma
creation_date: 2007-12-20T02:16:00Z
[Term]
id: SIBO:0000139
name: subpetiolar process
relationship: part_of SIBO:0000495 ! abdominal segment number 2
[Term]
id: SIBO:0000140
name: metasoma
is_a: SIBO:0000149 ! Anatomical part
[Term]
id: SIBO:0000141
name: hypopygium
def: "Hypopygium- The sternite of abdominal segment 7; the terminal visible gastral sternite. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000113 ! gaster
[Term]
id: SIBO:0000142
name: presclerite
def: "Presclerite- A distinctly differentiated anterior section of an abdominal sclerite, separated from the remainder of the sclerite by a ridge, constriction, or both. In the ant abdomen it is usual for the posterior portion of each sclerite to overlap the anterior portion of the following segment. The overlapped area usually lacks sculpture and pilosity, but the absence of these features alone does not constitute a presclerite. Presclerite derived from tergites are termed pretergites, those from sternites, presternites. The remainder of each sclerite, posterior to these developments, is the postsclerite and may be termed posttergite and poststernite, respectively. The presclerites of abdominal segment 3 form a very specialized articulateio with the posterior end of abdominal segment 2, termed the helicum. (Bolton, B. (1994). Identificstion guide to the ant genera of the world. Cambridge, Mass., Harvard University PRess. pp.1-222)." []
relationship: part_of SIBO:0000113 ! gaster
[Term]
id: SIBO:0000143
name: Semiochemical
def: "Natural chemicals released by an organism that affect the behaviors of other individuals" [http://en.wikipedia.org/wiki/Semiochemical]
is_a: SIBO:0000479 ! Chemical
[Term]
id: SIBO:0000144
name: R-dodecan-2-ol
is_a: SIBO:0000143 ! Semiochemical
relationship: is_relevant_for SIBO:0000322 ! Crematogaster castanea
[Term]
id: SIBO:0000145
name: Defense
is_a: SIBO:0000147 ! Behavior
[Term]
id: SIBO:0000146
name: Feeding
is_a: SIBO:0000147 ! Behavior
[Term]
id: SIBO:0000147
name: Behavior
[Term]
id: SIBO:0000148
name: <new term>
is_obsolete: true
[Term]
id: SIBO:0000149
name: Anatomical part
[Term]
id: SIBO:0000150
name: Hydrocarbons
def: "Compounds consisting of carbon and hydrogen only." [CHEBI:24632]
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000151
name: Brood Care
is_a: SIBO:0000147 ! Behavior
relationship: associated_with_behavior SIBO:0000442 ! Recruitment
[Term]
id: SIBO:0000152
name: Foraging
def: "Foraging is an individual behavior that creates emergent patterns. Depends on resource availability, travel time, conflict with neighbors and predators. Return of patrollers determines whether the forgers will be active at all that day." [XX:0003-0147/2003/16205-20398]
is_a: SIBO:0000147 ! Behavior
relationship: associated_with_behavior SIBO:0000146 ! Feeding
relationship: precedes SIBO:0000146 ! Feeding
[Term]
id: SIBO:0000153
name: Grooming
is_a: SIBO:0000147 ! Behavior
[Term]
id: SIBO:0000154
name: Mating Flight
is_a: SIBO:0000147 ! Behavior
[Term]
id: SIBO:0000155
name: Nest Care
is_a: SIBO:0000147 ! Behavior
[Term]
id: SIBO:0000156
name: tooth number 3
is_a: SIBO:0000101 ! tooth number
created_by: ilma
creation_date: 2007-12-20T02:16:00Z
[Term]
id: SIBO:0000157
name: tooth number 4
is_a: SIBO:0000101 ! tooth number
created_by: ilma
creation_date: 2007-12-20T02:17:00Z
[Term]
id: SIBO:0000158
name: <antennal scrobe>
is_obsolete: true
created_by: ilma
creation_date: 2007-12-20T02:18:00Z
[Term]
id: SIBO:0000159
name: Carboxylic acids
def: "Oxoacids having the structure RC=(=O)OH. The term is used as a suffix in systematic name function to denote the -C(=O)OH group including its carbon atom." [CHEBI:33575]
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000160
name: S-octan-3-ol
is_a: SIBO:0000143 ! Semiochemical
relationship: associated_with_behavior SIBO:0000230 ! Alarm
relationship: is_relevant_for SIBO:0000322 ! Crematogaster castanea
relationship: is_relevant_for SIBO:0000351 ! Crematogaster liengmei
[Term]
id: SIBO:0000161
name: Cyclic ketone
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000162
name: Esters
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000163
name: Nitrogen Heterocycle
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000164
name: Queen Substance
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000165
name: Sulphur Compound
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000166
name: Terpenoid Compound
is_a: SIBO:0000143 ! Semiochemical
[Term]
id: SIBO:0000167
name: 13-Methylheptacosane
def: "Profile of ant-derived compounds in silica gel nesting material." [DOI:10.1007/s10886-006-9249-y]
comment: Sample Type: Silica gel with excreta.\nAnalysis Method: No extraction with derivatization.\nCompound Name: 13-Methylheptacosane.\nSource of Standard: Ant extraction.\nSample Type-2: Silica gel in plastic tray or Petri dish.\nAnalysis Method-2: Pentane extraction w/o derivatization.\nCompound Name-2: 13-Methylheptacosane.\nSource of Standard-2: Ant extraction.\nSample Type-3: Silica gel in bottles or vials.\nAnalysis Method-3: Pyridiene extraction w/o derivatization.\nCompound Name-3: 13-Methylheptacosane\nSource of Standard-3: Ant extraction.
is_a: SIBO:0000150 ! Hydrocarbons