diff --git a/.github/workflows/dependencies.yaml b/.github/workflows/dependencies.yaml
index 2401107eb325..da180269cc7c 100644
--- a/.github/workflows/dependencies.yaml
+++ b/.github/workflows/dependencies.yaml
@@ -1,12 +1,9 @@
 name: Update dependencies
 on:
-  schedule:
-    - cron: '0 3 * * 6'  # Run every saturday at 3 am.
   workflow_dispatch:
 jobs:
   update_dependencies:
     name: Update dependencies
-    if: github.repository_owner == 'galaxyproject'
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v4
@@ -19,20 +16,4 @@ jobs:
             3.9
       - name: Update dependencies
         run: make update-dependencies
-      - name: Create pull request
-        uses: peter-evans/create-pull-request@v6
-        with:
-          author: galaxybot <galaxybot@users.noreply.github.com>
-          token: ${{ secrets.GALAXYBOT_PAT }}
-          commit-message: |
-            Update Python dependencies
-
-            by running `make update-dependencies`.
-          branch: dev_auto_update_dependencies
-          delete-branch: true
-          push-to-fork: galaxybot/galaxy
-          title: Update Python dependencies
-          body: by running `make update-dependencies`.
-          labels: |
-            area/dependencies
-            kind/enhancement
+      - run: git diff