The Asaph software implements methods for analyzing large inversions using SNP data. The following tutorials walk you through installing and using Asaph.
Using Asaph:
- Installing Asaph
- Preparing, Importing, and PCA of SNPs
- Detecting and Localizing Inversions
- Genotyping Inversions
Other tutorials related to Asaph:
- Testing Changes to Asaph (mostly for developers)
- Preparing the Inversion Benchmark Data Set (optional, only if you don't have your own data)