CI: Begin testing on Python 3.12 #855
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Stable tests | |
| # This file tests the claimed support range of NiBabel including | |
| # | |
| # * Operating systems: Linux, Windows (x64 & x86), OSX | |
| # * Dependencies: minimum requirements, optional requirements | |
| # * Installation methods: setup.py, sdist, wheel, archive | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - maint/* | |
| tags: | |
| - "*" | |
| pull_request: | |
| branches: | |
| - master | |
| - maint/* | |
| schedule: | |
| - cron: '0 0 * * 1' | |
| defaults: | |
| run: | |
| shell: bash | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3 | |
| - run: pip install --upgrade build twine | |
| - name: Build sdist and wheel | |
| run: python -m build | |
| - run: twine check dist/* | |
| - name: Build git archive | |
| run: mkdir archive && git archive -v -o archive/nibabel-archive.tgz HEAD | |
| - name: Upload sdist and wheel artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - name: Upload git archive artifact | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: archive | |
| path: archive/ | |
| test-package: | |
| runs-on: ubuntu-latest | |
| needs: [build] | |
| strategy: | |
| matrix: | |
| package: ['wheel', 'sdist', 'archive'] | |
| steps: | |
| - name: Download sdist and wheel artifacts | |
| if: matrix.package != 'archive' | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - name: Download git archive artifact | |
| if: matrix.package == 'archive' | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: archive | |
| path: archive/ | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3 | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Update pip | |
| run: pip install --upgrade pip | |
| - name: Install wheel | |
| if: matrix.package == 'wheel' | |
| run: pip install dist/nibabel-*.whl | |
| - name: Install sdist | |
| if: matrix.package == 'sdist' | |
| run: pip install dist/nibabel-*.tar.gz | |
| - name: Install archive | |
| if: matrix.package == 'archive' | |
| run: pip install archive/nibabel-archive.tgz | |
| - run: python -c 'import nibabel; print(nibabel.__version__)' | |
| - name: Install test extras | |
| run: pip install nibabel[test] | |
| - name: Run tests | |
| run: pytest --doctest-modules --doctest-plus -v --pyargs nibabel | |
| stable: | |
| # Check each OS, all supported Python, minimum versions and latest releases | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ['ubuntu-latest', 'windows-latest', 'macos-latest'] | |
| python-version: [3.8, 3.9, "3.10", "3.11"] | |
| architecture: ['x64', 'x86'] | |
| install: ['pip'] | |
| check: ['test'] | |
| pip-flags: [''] | |
| depends: ['REQUIREMENTS'] | |
| optional-depends: ['DEFAULT_OPT_DEPENDS'] | |
| include: | |
| # Basic dependencies only | |
| - os: ubuntu-latest | |
| python-version: 3.8 | |
| install: pip | |
| check: test | |
| pip-flags: '' | |
| depends: REQUIREMENTS | |
| optional-depends: '' | |
| # Absolute minimum dependencies | |
| - os: ubuntu-latest | |
| python-version: 3.8 | |
| install: pip | |
| check: test | |
| pip-flags: '' | |
| depends: MIN_REQUIREMENTS | |
| optional-depends: '' | |
| # Absolute minimum dependencies plus old MPL, Pydicom, Pillow | |
| - os: ubuntu-latest | |
| python-version: 3.8 | |
| install: pip | |
| check: test | |
| pip-flags: '' | |
| depends: MIN_REQUIREMENTS | |
| optional-depends: MIN_OPT_DEPENDS | |
| # Clean install imports only with package-declared dependencies | |
| - os: ubuntu-latest | |
| python-version: 3.8 | |
| install: pip | |
| check: skiptests | |
| pip-flags: '' | |
| depends: '' | |
| exclude: | |
| - os: ubuntu-latest | |
| architecture: x86 | |
| - os: macos-latest | |
| architecture: x86 | |
| env: | |
| DEPENDS: ${{ matrix.depends }} | |
| OPTIONAL_DEPENDS: ${{ matrix.optional-depends }} | |
| INSTALL_TYPE: ${{ matrix.install }} | |
| CHECK_TYPE: ${{ matrix.check }} | |
| EXTRA_PIP_FLAGS: ${{ matrix.pip-flags }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| architecture: ${{ matrix.architecture }} | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Create virtual environment | |
| run: tools/ci/create_venv.sh | |
| - name: Build archive | |
| run: | | |
| source tools/ci/build_archive.sh | |
| echo "ARCHIVE=$ARCHIVE" >> $GITHUB_ENV | |
| - name: Install dependencies | |
| run: tools/ci/install_dependencies.sh | |
| - name: Install NiBabel | |
| run: tools/ci/install.sh | |
| - name: Run tests | |
| if: ${{ matrix.check != 'skiptests' }} | |
| run: tools/ci/check.sh | |
| - uses: codecov/codecov-action@v3 | |
| if: ${{ always() }} | |
| with: | |
| files: cov.xml | |
| - name: Upload pytest test results | |
| if: ${{ always() && matrix.check == 'test' }} | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: pytest-results-${{ matrix.os }}-${{ matrix.python-version }} | |
| path: for_testing/test-results.xml | |
| publish: | |
| runs-on: ubuntu-latest | |
| environment: "Package deployment" | |
| needs: [stable, test-package] | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/') | |
| steps: | |
| - uses: actions/download-artifact@v3 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| user: __token__ | |
| password: ${{ secrets.PYPI_API_TOKEN }} |