Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

HELP-568 OBI ids not available for some tissues #8

Open
jeremywalter opened this issue Mar 7, 2023 · 0 comments
Open

HELP-568 OBI ids not available for some tissues #8

jeremywalter opened this issue Mar 7, 2023 · 0 comments
Assignees

Comments

@jeremywalter
Copy link
Contributor

Dear C2M2 support,

In the process of looking up the respective OBI ids for tissues in the MoTrPAC data, I was not able to find ids for the following tissues:

brown adipose
gastrocnemius
hippocampus
hypothalamus
small intestine
vastus lateralis
vena cava
white adipose

Thanks to Matt’s suggestion on looking up just adipose alone, I was able to find the respective OBI id for it (OBI:0002530). Can you let us know whether this OBI id is sufficient for both brown and white adipose?

As for the other tissues, would you mind letting me know whether I was looking at the wrong tissue term or they just don’t have equivalent OBI ids at this time?

Thank you,

Jimmy Zhen

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants