From 1f3056729442829a4ab3cfed8640e9d60ebed067 Mon Sep 17 00:00:00 2001 From: John SJ Anderson Date: Wed, 5 Jun 2024 10:49:19 -0700 Subject: [PATCH] Rename phylogenetic CI config file to standard name --- .github/workflows/ci.yaml | 4 ++-- phylogenetic/README.md | 2 +- .../build-configs/ci/{profiles_config.yaml => config.yaml} | 0 3 files changed, 3 insertions(+), 3 deletions(-) rename phylogenetic/build-configs/ci/{profiles_config.yaml => config.yaml} (100%) diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml index 1598935..5a233e2 100644 --- a/.github/workflows/ci.yaml +++ b/.github/workflows/ci.yaml @@ -18,11 +18,11 @@ jobs: run: | nextstrain build \ phylogenetic \ - --configfile build-configs/ci/profiles_config.yaml + --configfile build-configs/ci/config.yaml artifact-name: output-${{ matrix.runtime }} artifact-paths: | phylogenetic/auspice/ phylogenetic/results/ phylogenetic/benchmarks/ phylogenetic/logs/ - phylogenetic/.snakemake/log/ \ No newline at end of file + phylogenetic/.snakemake/log/ diff --git a/phylogenetic/README.md b/phylogenetic/README.md index 6685cdd..8d2f41c 100644 --- a/phylogenetic/README.md +++ b/phylogenetic/README.md @@ -48,7 +48,7 @@ Alternatively, you can run the build using the example data provided in this repository. To run the build by copying the example sequences into the `data/` directory, use the following: - nextstrain build . --configfile build-configs/ci/profiles_config.yaml + nextstrain build . --configfile build-configs/ci/config.yaml ### Deploying build diff --git a/phylogenetic/build-configs/ci/profiles_config.yaml b/phylogenetic/build-configs/ci/config.yaml similarity index 100% rename from phylogenetic/build-configs/ci/profiles_config.yaml rename to phylogenetic/build-configs/ci/config.yaml