diff --git a/data/nextstrain/rsv/a/EPI_ISL_412866/pathogen.json b/data/nextstrain/rsv/a/EPI_ISL_412866/pathogen.json index 17fc3ad3..994a8c5b 100644 --- a/data/nextstrain/rsv/a/EPI_ISL_412866/pathogen.json +++ b/data/nextstrain/rsv/a/EPI_ISL_412866/pathogen.json @@ -83,5 +83,8 @@ "name": "RSV-A", "reference accession": "EPI_ISL_412866", "reference name": "hRSV/A/England/397/2017" + }, + "version": { + "tag": "unreleased" } -} \ No newline at end of file +} diff --git a/data/nextstrain/rsv/b/EPI_ISL_1653999/pathogen.json b/data/nextstrain/rsv/b/EPI_ISL_1653999/pathogen.json index 64535e31..c5697118 100644 --- a/data/nextstrain/rsv/b/EPI_ISL_1653999/pathogen.json +++ b/data/nextstrain/rsv/b/EPI_ISL_1653999/pathogen.json @@ -83,5 +83,8 @@ "name": "RSV-B", "reference accession": "EPI_ISL_1653999", "reference name": "hRSV/B/Australia/VIC-RCH056/2019" + }, + "version": { + "tag": "unreleased" } -} \ No newline at end of file +} diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/pathogen.json b/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/pathogen.json index 90b33d58..994a8c5b 100644 --- a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/pathogen.json +++ b/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/pathogen.json @@ -4,14 +4,14 @@ "excessBandwidth": 9, "terminalBandwidth": 100, "allowedMismatches": 4, - "gapAlignmentSide": "right", + "gapAlignmentSide": "left", "minSeedCover": 0.1 }, "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" }, - "defaultGene": "HA1", + "defaultGene": "F", "files": { "changelog": "CHANGELOG.md", "examples": "sequences.fasta", diff --git a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/tree.json b/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/tree.json index 9fd51e7c..4479063c 100644 --- a/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/tree.json +++ b/data_output/nextstrain/rsv/a/EPI_ISL_412866/unreleased/tree.json @@ -1 +1 @@ -{"version":"v2","meta":{"title":"Nextclade reference tree for RSV-a with root EPI_ISL_412866 built on 2023-11-26","updated":"2023-11-26","build_url":"https://github.com/neherlab/nextclade_data_workflows","data_provenance":[{"name":"Genbank"}],"maintainers":[{"name":"Cornelius Roemer","url":"https://neherlab.org"},{"name":"Richard 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