From c356a0af91a2c645f5bd005add48ac03a58bd674 Mon Sep 17 00:00:00 2001 From: Richard Neher Date: Sat, 18 Nov 2023 14:07:14 +0100 Subject: [PATCH] flu: update datasets --- CHANGELOG.md | 7 + .../2023-11-18T12:00:00Z/files/genemap.gff | 5 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 33 + .../files/reference.fasta | 2 + .../files/sequences.fasta | 1364 ++++++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 26 + .../2023-11-18T12:00:00Z/files/genemap.gff | 5 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 33 + .../files/reference.fasta | 27 + .../files/sequences.fasta | 1364 ++++++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 26 + .../2023-11-18T12:00:00Z/files/genemap.gff | 4 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 33 + .../files/reference.fasta | 25 + .../files/sequences.fasta | 1100 +++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 22 + .../2023-11-18T12:00:00Z/files/genemap.gff | 5 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 33 + .../files/reference.fasta | 26 + .../files/sequences.fasta | 1320 ++++++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 26 + .../2023-11-18T12:00:00Z/files/genemap.gff | 4 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 33 + .../files/reference.fasta | 2 + .../files/sequences.fasta | 1144 ++++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 22 + .../2023-11-18T12:00:00Z/files/genemap.gff | 5 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 33 + .../files/reference.fasta | 28 + .../files/sequences.fasta | 1408 +++++++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 26 + .../2023-11-18T12:00:00Z/files/genemap.gff | 4 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 33 + .../files/reference.fasta | 25 + .../files/sequences.fasta | 1188 ++++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 22 + .../2023-11-18T12:00:00Z/files/genemap.gff | 5 + .../2023-11-18T12:00:00Z/files/primers.csv | 1 + .../2023-11-18T12:00:00Z/files/qc.json | 30 + .../files/reference.fasta | 2 + .../files/sequences.fasta | 1280 +++++++++++++++ .../2023-11-18T12:00:00Z/files/tag.json | 25 + .../2023-11-18T12:00:00Z/files/tree.json | 1 + .../files/virus_properties.json | 5 + 65 files changed, 11001 insertions(+) create mode 100644 data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/genemap.gff create mode 100644 data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/primers.csv create mode 100644 data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/qc.json create mode 100644 data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/reference.fasta create mode 100644 data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/sequences.fasta create mode 100644 data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/tag.json create mode 100644 data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/tree.json create mode 100644 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data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/virus_properties.json create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/genemap.gff create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/primers.csv create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/qc.json create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/reference.fasta create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/sequences.fasta create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tag.json create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tree.json create mode 100644 data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/virus_properties.json diff --git a/CHANGELOG.md b/CHANGELOG.md index 41005bcb..30e59854 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,12 @@ # CHANGELOG +## 2023-11-18 + +### New Influenza datasets version (tag `2023-11-18T12:00:00Z`) + + - new subclades for several lineages + - new alias for A/H3N2 HA + ## 2023-10-26 ### New SARS-CoV-2 dataset version (tag `2023-10-26T12:00:00Z`) diff --git a/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..a3952a1f --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,5 @@ +##gff-version 3 +##sequence-region CY121680.1 1 1752 +CY121680.1 feature gene 21 71 . + . gene_name="SigPep" +CY121680.1 feature gene 72 1052 . + . gene_name="HA1" +CY121680.1 feature gene 1053 1718 . + . gene_name="HA2" diff --git a/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..a0219afe --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,33 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15, + "weightLabeledSubstitutions": 2, + "weightReversionSubstitutions": 1, + "weightUnlabeledSubstitutions": 1 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..a3b664be --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,2 @@ +>CY121680.1 Influenza A virus (A/California/07/2009(H1N1)) hemagglutinin (HA) gene, complete cds +GGAAAACAAAAGCAACAAAAATGAAGGCAATACTAGTAGTTCTGCTATATACATTTGCAACCGCAAATGCAGACACATTATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTAGACACAGTACTAGAAAAGAATGTAACAGTAACACACTCTGTTAACCTTCTAGAAGACAAGCATAACGGGAAACTATGCAAACTAAGAGGGGTAGCCCCATTGCATTTGGGTAAATGTAACATTGCTGGCTGGATCCTGGGAAATCCAGAGTGTGAATCACTCTCCACAGCAAGCTCATGGTCCTACATTGTGGAAACACCTAGTTCAGACAATGGAACGTGTTACCCAGGAGATTTCATCGATTATGAGGAGCTAAGAGAGCAATTGAGCTCAGTGTCATCATTTGAAAGGTTTGAGATATTCCCCAAGACAAGTTCATGGCCCAATCATGACTCGAACAAAGGTGTAACGGCAGCATGTCCTCATGCTGGAGCAAAAAGCTTCTACAAAAATTTAATATGGCTAGTTAAAAAAGGAAATTCATACCCAAAGCTCAGCAAATCCTACATTAATGATAAAGGGAAAGAAGTCCTCGTGCTATGGGGCATTCACCATCCATCTACTAGTGCTGACCAACAAAGTCTCTATCAGAATGCAGATGCATATGTTTTTGTGGGGTCATCAAGATACAGCAAGAAGTTCAAGCCGGAAATAGCAATAAGACCCAAAGTGAGGGATCGAGAAGGGAGAATGAACTATTACTGGACACTAGTAGAGCCGGGAGACAAAATAACATTCGAAGCAACTGGAAATCTAGTGGTACCGAGATATGCATTCGCAATGGAAAGAAATGCTGGATCTGGTATTATCATTTCAGATACACCAGTCCACGATTGCAATACAACTTGTCAAACACCCAAGGGTGCTATAAACACCAGCCTCCCATTTCAGAATATACATCCGATCACAATTGGAAAATGTCCAAAATATGTAAAAAGCACAAAATTGAGACTGGCCACAGGATTGAGGAATATCCCGTCTATTCAATCTAGAGGCCTATTTGGGGCCATTGCCGGTTTCATTGAAGGGGGGTGGACAGGGATGGTAGATGGATGGTACGGTTATCACCATCAAAATGAGCAGGGGTCAGGATATGCAGCCGACCTGAAGAGCACACAGAATGCCATTGACGAGATTACTAACAAAGTAAATTCTGTTATTGAAAAGATGAATACACAGTTCACAGCAGTAGGTAAAGAGTTCAACCACCTGGAAAAAAGAATAGAGAATTTAAATAAAAAAGTTGATGATGGTTTCCTGGACATTTGGACTTACAATGCCGAACTGTTGGTTCTATTGGAAAATGAAAGAACTTTGGACTACCACGATTCAAATGTGAAGAACTTATATGAAAAGGTAAGAAGCCAGCTAAAAAACAATGCCAAGGAAATTGGAAACGGCTGCTTTGAATTTTACCACAAATGCGATAACACGTGCATGGAAAGTGTCAAAAATGGGACTTATGACTACCCAAAATACTCAGAGGAAGCAAAATTAAACAGAGAAGAAATAGATGGGGTAAAGCTGGAATCAACAAGGATTTACCAGATTTTGGCGATCTATTCAACTGTCGCCAGTTCATTGGTACTGGTAGTCTCCCTGGGGGCAATCAGTTTCTGGATGTGCTCTAATGGGTCTCTACAGTGTAGAATATGTATTTAACATTAGGATTTCAGAAGCATGAGAAAAACAC diff --git a/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/sequences.fasta b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/sequences.fasta new file mode 100644 index 00000000..3819028e --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/sequences.fasta @@ -0,0 +1,1364 @@ +>A/Georgia/21/2023 +ggaaaacaaaagcaacaaaaatgatggcaatactagtagttatgctgtatacatttacaa +ccgcaaatgcagacacattatgtataggttatcatgcgaacaattcaacagacactgtgg +acacagtactggaaaagaatgtaacagtaacacactctgtcaatcttctagaagacaagc +ataacggaaaactatgcaaactaagaggggtagccccattgcatttgggtcaatgtaaca +ttgctggctggatcttgggaaatccagagtgtgaatcactctccacagcaagatcatggt +cctacattgtggaaacatctaattcagacaatggaacgtgttacccaggagatttcatca +attatgaggagctaagagagcaattgagctcagtgtcatcatttgaaaggtttgaaatat +tccccaagacaagttcatggcctaatcatgactcggacaatggtgtaacggcagcatgtt +ctcacgctggagcaagaagcttctacaaaaacttgatatggctggttaaaaaaggaaaat 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b/data/datasets/flu_h1n1pdm_ha/references/CY121680/versions/2023-11-18T12:00:00Z/files/virus_properties.json @@ -0,0 +1,26 @@ +{ + "schemaVersion": "1.10.0", + "nucMutLabelMap": {}, + "nucMutLabelMapReverse": {}, + "aaMotifs": [ + { + "name": "glycosylation", + "nameShort": "Glyc.", + "nameFriendly": "Glycosylation", + "description": "N-linked glycosylation motifs (N-X-S/T with X any amino acid other than P)", + "includeGenes": [ + { + "gene":"HA1", + "ranges":[] + }, + { + "gene":"HA2", + "ranges":[{"begin":0, "end":186}] + } + ], + "motifs": [ + "N[^P][ST]" + ] + } + ] +} \ No newline at end of file diff --git a/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..825fe437 --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,5 @@ +##gff-version 3 +##sequence-region MW626062.1 1 1752 +MW626062.1 feature gene 21 71 . + . gene_name="SigPep" +MW626062.1 feature gene 72 1052 . + . gene_name="HA1" +MW626062.1 feature gene 1053 1718 . + . gene_name="HA2" diff --git a/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..a0219afe --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,33 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15, + "weightLabeledSubstitutions": 2, + "weightReversionSubstitutions": 1, + "weightUnlabeledSubstitutions": 1 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..546126e1 --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,27 @@ +>MW626062.1 Influenza A virus (A/Wisconsin/588/2019(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds +GGAAAACAAAAGCAACAAAAATGAAGGCAATACTAGTAGTTATGCTGTATACATTTACAACCGCAAATGC +AGACACATTATGTATAGGTTATCATGCGAACAATTCAACAGACACTGTGGACACAGTACTAGAAAAGAAT +GTAACAGTAACACACTCTGTCAATCTTCTGGAAGACAAGCATAACGGAAAACTATGCAAACTAAGAGGGG +TAGCCCCATTGCATTTGGGTAAATGTAACATTGCTGGCTGGATCCTGGGAAATCCAGAGTGTGAATCACT +CTCCACAGCAAGATCATGGTCCTACATTGTGGAAACATCTAATTCAGACAATGGAACGTGTTACCCAGGA +GATTTCATCAATTATGAGGAGCTAAGAGAGCAATTGAGCTCAGTGTCATCATTTGAAAGGTTTGAAATAT +TCCCCAAGACAAGTTCATGGCCTAATCATGACTCGGACAATGGTGTAACGGCAGCATGTCCTCACGCTGG +AGCAAAAAGCTTCTACAAAAACTTGATATGGCTGGTTAAAAAAGGAAAATCATACCCAAAGATCAACCAA +ACCTACATTAATGATAAAGGGAAAGAAGTCCTCGTGCTGTGGGGCATTCACCATCCACCTACTATTGCTG +ACCAACAAAGTCTCTATCAGAATGCAGATGCATATGTTTTTGTGGGGACATCAAGATACAGCAAGAAGTT +CAAGCCGGAAATAGCAACAAGACCCAAAGTGAGGGATCAAGAAGGGAGAATGAACTATTACTGGACACTA +GTAGAACCGGGAGACAAAATAACATTCGAAGCAACTGGTAATCTAGTGGCACCGAGATATGCATTCACAA +TGGAAAGAGATGCTGGATCTGGTATTATCATTTCAGATACACCAGTCCACGATTGCAATACAACTTGTCA +GACACCCGAGGGTGCTATAAACACCAGCCTCCCATTTCAGAATGTACATCCGATCACAATTGGGAAATGT +CCAAAGTATGTAAAAAGCACAAAATTGAGACTGGCCACAGGATTGAGGAATGTCCCGTCTATTCAATCTA +GAGGCCTATTCGGGGCCATTGCTGGCTTCATCGAAGGGGGGTGGACAGGGATGGTAGATGGATGGTACGG +TTATCACCATCAAAATGAGCAGGGGTCAGGATATGCAGCCGATCTGAAGAGCACACAAAATGCCATTGAT +AAGATTACTAACAAAGTAAATTCTGTTATTGAAAAGATGAATACACAGTTCACAGCAGTTGGTAAAGAGT +TCAACCACCTTGAAAAAAGAATAGAGAATCTAAATAAAAAGGTTGATGATGGTTTCCTGGACATTTGGAC +TTACAATGCCGAACTGTTGGTTCTACTGGAAAACGAAAGAACTTTGGACTATCACGATTCAAATGTGAAG +AACTTGTATGAAAAAGTAAGAAACCAGTTAAAAAACAATGCCAAGGAAATTGGAAACGGCTGCTTTGAAT +TTTACCACAAATGCGACAACACATGCATGGAAAGTGTCAAGAATGGGACTTATGACTACCCAAAATACTC +AGAGGAAGCAAAATTAAACAGAGAAAAAATAGATGGAGTAAAGCTGGACTCAACAAGGATCTACCAGATT +TTGGCGATCTATTCAACTGTTGCCAGTTCATTGGTACTGGTAGTCTCCCTGGGGGCAATCAGCTTCTGGA +TGTGCTCTAATGGGTCTCTACAGTGTAGAATATGTATTTAACATTAGGATTTCAGAATCATGAGAAAAAC +AC diff --git a/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/sequences.fasta b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/sequences.fasta new file mode 100644 index 00000000..0e8062f7 --- /dev/null +++ b/data/datasets/flu_h1n1pdm_ha/references/MW626062/versions/2023-11-18T12:00:00Z/files/sequences.fasta @@ -0,0 +1,1364 @@ +>A/SouthDakota/32/2023 +ggaaaacaaaagcaacaaaaatgaaggcaatactagtagttatgctgtatacatttacaa +ccgcaaatgcagacacattatgtataggttatcatgcgaacaattcaacagacactgtgg +acacagtactagaaaagaatgtaacagtaacacactctgtcaatcttctagaagacaagc +ataacggaaaactatgcaaactaagaggggtagccccattgcatttgggtcaatgtaaca +ttgctggctggatcttgggaaatccagagtgtgaatcactctccacagcaaggtcatggt +cctacattgtggaaacatctaattcagacaatggaacgtgttacccaggagatttcatca 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"nameFriendly": "Glycosylation", + "description": "N-linked glycosylation motifs (N-X-S/T with X any amino acid other than P)", + "includeGenes": [ + { + "gene":"HA1", + "ranges":[] + }, + { + "gene":"HA2", + "ranges":[{"begin":0, "end":186}] + } + ], + "motifs": [ + "N[^P][ST]" + ] + } + ] +} \ No newline at end of file diff --git a/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..f026596c --- /dev/null +++ b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,4 @@ +##gff-version 3 +##sequence-region MW626056.1 1 1433 +MW626056.1 annotation remark 1 1433 . . . accessions=MW626056;data_file_division=VRL;date=23-FEB-2021;keywords=;molecule_type=cRNA;organism=Influenza A virus;references=location: %5B0:1433%5D%0Aauthors: Jernigan%2CD.%2C Wentworth%2CD.%2C Barnes%2CJ.%2C Garten%2CR. and Xu%2CX.%0Atitle: Influenza Sequencing Activity group%0Ajournal: Unpublished%0Amedline id: %0Apubmed id: %0Acomment:,location: %5B0:1433%5D%0Aauthors: Jernigan%2CD.%2C Wentworth%2CD.%2C Barnes%2CJ.%2C Garten%2CR. and Xu%2CX.%0Atitle: Direct Submission%0Ajournal: Submitted %2817-FEB-2021%29 WHO Collaborating Center for Surveillance%2C Epidemiology and Control of Influenza%2C Influenza Division%2C Centers for Disease Control and Prevention%2C 1600 Clifton Road%2C N.E.%2C Atlanta%2C GA 30333%2C USA%0Amedline id: %0Apubmed id: %0Acomment:;sequence_version=1;source=Influenza A virus;structured_comment=OrderedDict%28%5B%28%27FluData%27%2C OrderedDict%28%5B%28%27EPI_ISOLATE_ID%27%2C %27EPI_ISL_628888%27%29%2C %28%27NAME%27%2C %27A/Wisconsin/588/2019%27%29%2C %28%27TYPE%27%2C %27H1N1%27%29%2C %28%27Segment_name%27%2C %27NA%27%29%2C %28%27HOST_AGE%27%2C %2766%27%29%2C %28%27HOST_GENDER%27%2C %27M%27%29%2C %28%27PASSAGE%27%2C %27C2S1 %282020-05-15%29%27%29%2C %28%27LOCATION%27%2C %27United States / Wisconsin%27%29%2C %28%27COLLECT_DATE%27%2C %2719-Dec-2019%27%29%2C %28%27Lineage%27%2C %27A%28H1N1%29pdm09%27%29%2C %28%27SPECIMEN_ID%27%2C %2719VR015562 ORIGINAL%27%29%2C %28%27SENDER_LAB%27%2C %27Wisconsin State Laboratory of Hygiene +MW626056.1 feature gene 9 1418 . + . codon_start=1;gene=NA;gene_name=NA;product=neuraminidase;protein_id=QRV63257.1; diff --git a/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..a0219afe --- /dev/null +++ b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,33 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15, + "weightLabeledSubstitutions": 2, + "weightReversionSubstitutions": 1, + "weightUnlabeledSubstitutions": 1 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..02ca3b74 --- /dev/null +++ b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,25 @@ +>MW626056.1 Influenza A virus (A/Wisconsin/588/2019(H1N1)) segment 6 neuraminidase (NA) gene, complete cds +AGTTTAAAATGAATCCAAACCAAAAGATAATAACCATTGGTTCTATCTGTATGACAATTG +GAACGGCTAACTTAATATTACAAATTGGAAACATAATCTCAATATGGGTTAGCCACTCAA +TTCAAATTGGAAATCAAAGCCAGATTGAAACATGCAATAAAAGCGTCATTACTTATGAAA +ACAACACTTGGGTAAATCAGACATTTGTTAACATCAGCAACACTAACTCTGCTGCTAGAC +AGTCAGTGGCTTCCGTGAAATTAGCGGGCAATTCCTCTCTCTGCCCTGTTAGTGGATGGG +CTATATACAGTAAAGACAACAGTGTAAGAATCGGTTCCAAGGGGGATGTGTTTGTCATAA +GGGAACCATTCATATCATGCTCTCCCTTGGAATGCAGAACCTTCTTCTTGACTCAAGGGG +CTTTGCTAAATGACAAACATTCCAATGGAACCATTAAAGACAGAAGCCCATATCGAACCC +TAATGAGCTGTCCTATTGGTGAAGTTCCCTCTCCATACAACTCAAGATTTGAGTCAGTCG 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a/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/sequences.fasta b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/sequences.fasta new file mode 100644 index 00000000..166219ee --- /dev/null +++ b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/sequences.fasta @@ -0,0 +1,1100 @@ +>A/Montana/13/2023 +agtttaaaatgaatccaaaccaaaagataataaccattggttctatctgtatgacaattg +gaacggctaacttaatattacaaattggaaacataatttcaatatgggttagccactcaa +ttcaaattggaaatcaaagccagattgaaacatgcaataaaagcgtcattacttatgaaa +acaacacttgggtaaatcagacatttgttaacatcagcaacactaactctgctgctagac +agtcagtggcttccgtgaaattagcgggcaattcatctctctgccctgttagtggatggg +ctatatacagtaaagacaacagtgtaagaatcggttccaagggggatgtgtttgtcataa +gggaaccattcatatcatgctctcccttggaatgcagaaccttcttcttgactcaagggg +ctttgctaaatgacaaacattccaatggaacaattaaagacagaagcccatatcgaacac +taatgagctgtcctattggtgaagttccctctccatacaactcaagatttgagtcagttg 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a/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/tag.json b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/tag.json new file mode 100644 index 00000000..51193197 --- /dev/null +++ b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/tag.json @@ -0,0 +1,25 @@ +{ + "tag": "2023-11-18T12:00:00Z", + "comment": "Addition of experimental lineages", + "compatibility": { + "nextcladeCli": { + "min": "1.3.0", + "max": null + }, + "nextcladeWeb": { + "min": "1.6.0", + "max": null + } + }, + "enabled": true, + "files": { + "geneMap": "genemap.gff", + "primers": "primers.csv", + "qc": "qc.json", + "reference": "reference.fasta", + "sequences": "sequences.fasta", + "tree": "tree.json", + "virusPropertiesJson": "virus_properties.json" + }, + "metadata": {} +} diff --git a/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/tree.json b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/tree.json new file mode 100644 index 00000000..8e427e10 --- /dev/null +++ b/data/datasets/flu_h1n1pdm_na/references/MW626056/versions/2023-11-18T12:00:00Z/files/tree.json @@ -0,0 +1 @@ +{"version": "v2", "meta": {"title": "Nextclade reference tree for Influenza type:h1n1pdm segment:na with root MW626056 built on 2023-11-18", "updated": "2023-11-18", "build_url": "https://github.com/neherlab/nextclade_data_workflows", "data_provenance": [{"name": "GISAID"}], "maintainers": [{"name": "Cornelius Roemer", "url": "https://neherlab.org"}, {"name": "Richard Neher", "url": "https://neherlab.org"}], "display_defaults": {"color_by": "clade_membership", "distance_measure": "div", "branch_label": "clade"}, "genome_annotations": {"NA": {"end": 1418, "seqid": "dataset_config/h1n1pdm/na/MW626056/annotation.gff", "start": 9, "strand": "+", "type": "gene"}, "nuc": {"end": 1433, "start": 1, "strand": "+", "type": 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a/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..579ff7ff --- /dev/null +++ b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,5 @@ +##gff-version 3 +##sequence-region CY163680.1 1 1737 +CY163680.1 feature gene 18 65 . + . gene_name="SigPep" +CY163680.1 feature gene 66 1052 . + . gene_name="HA1" +CY163680.1 feature gene 1053 1715 . + . gene_name="HA2" diff --git a/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..a0219afe --- /dev/null +++ b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,33 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15, + "weightLabeledSubstitutions": 2, + "weightReversionSubstitutions": 1, + "weightUnlabeledSubstitutions": 1 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..a4df05fb --- /dev/null +++ b/data/datasets/flu_h3n2_ha/references/CY163680/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,26 @@ +>CY163680.1 Influenza A virus (A/Wisconsin/67/2005(H3N2)) hemagglutinin (HA) gene, complete cds +GGATAATTCTATTAACCATGAAGACTATCATTGCTTTGAGCTACATTCTATGTCTGGTTTTCGCTCAAAA +ACTTCCCGGAAATGACAACAGCACGGCAACGCTGTGCCTTGGGCACCATGCAGTACCAAACGGAACGATA +GTGAAAACAATCACGAATGACCAAATTGAAGTTACTAATGCTACTGAGCTGGTTCAGAGTTCCTCAACAG +GTGGAATATGCGACAGTCCTCATCAGATCCTTGATGGAGAAAACTGCACACTAATAGATGCTCTATTGGG +AGACCCTCAGTGTGATGGCTTCCAAAATAAGAAATGGGACCTTTTTGTTGAACGCAGCAAAGCCTACAGC +AACTGTTACCCTTATGATGTGCCGGATTATGCCTCCCTTAGGTCACTAGTTGCCTCATCCGGCACACTGG 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"ranges":[{"begin":0, "end":186}] + } + ], + "motifs": [ + "N[^P][ST]" + ] + } + ] +} \ No newline at end of file diff --git a/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..cdeefd62 --- /dev/null +++ b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,4 @@ +##gff-version 3 +##sequence-region EPI1857215 1 1433 +EPI1857215 annotation remark 1 1439 . . . accessions=EPI1857215; +EPI1857215 feature gene 8 1417 . + . codon_start=1;gene=NA;gene_name=NA;product=neuraminidase; diff --git a/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..a0219afe --- /dev/null +++ b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,33 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15, + "weightLabeledSubstitutions": 2, + "weightReversionSubstitutions": 1, + "weightUnlabeledSubstitutions": 1 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..a656dd57 --- /dev/null +++ b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,2 @@ +>EPI1857215 +AGTAAAGATGAATCCAAATCAAAAGATAATAACGATTGGCTCTGTTTCTCTCACAATTTCCACAATATGCTTCTTCATGCAAATTGCCATCCTGATAACTACTGTAACATTGCATTTCAAGCAATATGAATTCAACTCCCCCCCAAATAACCAAGTGATGCTGTGTGAACCAACAATAATAGAAAGAAACATAACAGAGATAGTGTATTTGACCAACACCACCATAGAGAAGGAAATATGCCCCAAACCAGCAGAATACAGAAATTGGTCAAAACCGCAATGTGGCATTACAGGATTTGCACCTTTCTCTAAGGACAATTCGATTAGGCTTTCCGCTGGTGGGGACATCTGGGTGACAAGAGAACCTTATGTGTCATGCGATCTTGACAAGTGTTATCAATTTGCCCTTGGACAGGGAACAACACTAAACAATGTGCATTCAAATAACACAGTACGTGATAGAACCCCTTATCGGACTCTATTGATGAATGAGTTGGGTGTTCCTTTCCATCTGGGGACCAAGCAAGTGTGCATAGCATGGTCCAGCTCAAGTTGTCACGATGGAAAAGCATGGCTGCATGTTTGTATAACGGGGGATGATAAAAATGCAACTGCTAGCTTCATTTACAATGGGAGGCTTGTAGATAGTGTTGTTTCATGGTCCAACGATATTCTCAGAACCCAGGAGTCAGAATGCGTTTGTATCAATGGAACTTGTACAGTAGTAATGACTGATGGAAATGCTACAGGAAAAGCTGATACTAAAATACTATTCATTGAGGAGGGGAAAATCGTTCATACTAGCAAATTGTCAGGAAGTGCTCAGCATGTCGAAGAGTGCTCTTGCTATCCTCGATATCCTGGTGTCAGATGTGTCTGCAGAGACAACTGGAAAGGATCCAACCGGCCCATCATAGATATAAACATAAAGGATCATAGCATTGTTTCCAGGTATGTGTGTTCTGGACTTGTTGGAGACACACCCAGAAAAAGCGACAGCTCCAGCAGTAGCCATTGTTTGAACCCTAACAATGAAAAAGGTGATCATGGAGTGAAAGGCTGGGCCTTTGATGATGGAAATGACGTGTGGATGGGGAGAACAATCAACGAGACGTCACGCTTAGGGTATGAAACCTTCAAAGTCGTTGAAGGCTGGTCCAACCCTAAGTCCAAATTGCAGATAAATAGGCAAGTCATAGTTGACAGAGGCGATAGGTCCGGTTATTCTGGTATTTTCTCTGTTGAAGGCAAAAGCTGCATCAATCGGTGCTTTTATGTGGAGTTGATTAGGGGAAGAAAAGAGGAAACTGAAGTCTTGTGGACTTCAAACAGTATTGTTGTGTTTTGTGGCACCTCAGGTACATATGGAACAGGCTCATGGCCTGATGGGGCGAACCTCAGTCTCATGCATATATAAGCTTTCGCAATTTTAGAAAAAA 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"EPI_ISL": {"value": "EPI2509654"}, "date": {"value": "2023-02-23"}, "clade_membership": {"value": "B.4"}, "region": {"value": "china"}}, "branch_attrs": {"mutations": {}}}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}} \ No newline at end of file diff --git a/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/virus_properties.json b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/virus_properties.json new file mode 100644 index 00000000..a56465d3 --- /dev/null +++ b/data/datasets/flu_h3n2_na/references/EPI1857215/versions/2023-11-18T12:00:00Z/files/virus_properties.json @@ -0,0 +1,22 @@ +{ + "schemaVersion": "1.10.0", + "nucMutLabelMap": {}, + "nucMutLabelMapReverse": {}, + "aaMotifs": [ + { + "name": "glycosylation", + "nameShort": "Glyc.", + "nameFriendly": "Glycosylation", + "description": "N-linked glycosylation motifs (N-X-S/T with X any amino acid other than P)", + "includeGenes": [ + { + "gene":"NA", + "ranges":[{"begin":33, "end":470}] + } + ], + "motifs": [ + "N[^P][ST]" + ] + } + ] +} \ No newline at end of file diff --git a/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..6b0fe595 --- /dev/null +++ b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,5 @@ +##gff-version 3 +##sequence-region KX058884.1 1 1885 +KX058884.1 feature gene 34 78 . + . gene_name="SigPep" +KX058884.1 feature gene 79 1119 . + . gene_name="HA1" +KX058884.1 feature gene 1120 1791 . + . gene_name="HA2" diff --git a/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..a0219afe --- /dev/null +++ b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,33 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15, + "weightLabeledSubstitutions": 2, + "weightReversionSubstitutions": 1, + "weightUnlabeledSubstitutions": 1 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..6d22e3ea --- /dev/null +++ b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,28 @@ +>KX058884.1 Influenza B virus (B/Brisbane/60/2008) segment 4 hemagglutinin (HA) gene, complete cds +AGCAGAAGCAGAGCATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACAT +CCAATGCAGATCGAATCTGCACTGGGATAACATCGTCAAACTCACCACATGTCGTCAAAACTGCTACTCA +AGGGGAGGTCAATGTGACTGGTGTAATACCACTGACAACAACACCCACCAAATCTCATTTTGCAAATCTC +AAAGGAACAGAAACCAGGGGGAAACTATGCCCAAAATGCCTCAACTGCACAGATCTGGACGTAGCCTTGG +GCAGACCAAAATGCACGGGGAAAATACCCTCGGCAAGAGTTTCAATACTCCATGAAGTCAGACCTGTTAC +ATCTGGGTGCTTTCCTATAATGCACGACAGAACAAAAATTAGACAGCTGCCTAACCTTCTCCGAGGATAC +GAACATATCAGGTTATCAACCCATAACGTTATCAATGCAGAAAATGCACCAGGAGGACCCTACAAAATTG +GAACCTCAGGGTCTTGCCCTAACATTACCAATGGAAACGGATTTTTCGCAACAATGGCTTGGGCCGTCCC +AAAAAACGACAAAAACAAAACAGCAACAAATCCATTAACAATAGAAGTACCATACATTTGTACAGAAGGA +GAAGACCAAATTACCGTTTGGGGGTTCCACTCTGACAACGAGGCCCAAATGGCAAAGCTCTATGGGGACT +CAAAGCCCCAGAAGTTCACCTCATCTGCCAACGGAGTGACCACACATTACGTTTCACAGATTGGTGGCTT +CCCAAATCAAACAGAAGACGGAGGACTACCACAAAGTGGTAGAATTGTTGTTGATTACATGGTGCAAAAA +TCTGGGAAAACAGGAACAATTACCTATCAAAGGGGTATTTTATTGCCTCAAAAGGTGTGGTGCGCAAGTG +GCAGGAGCAAGGTAATAAAAGGATCCTTGCCTTTAATTGGAGAAGCAGATTGCCTCCACGAAAAATACGG +TGGATTAAACAAAAGCAAGCCTTACTACACAGGGGAACATGCAAAGGCCATAGGAAATTGCCCAATATGG +GTGAAAACACCCTTGAAGCTGGCCAATGGAACCAAATATAGACCTCCTGCAAAACTATTAAAGGAAAGGG +GTTTCTTCGGAGCTATTGCTGGTTTCTTAGAAGGAGGATGGGAAGGAATGATTGCAGGTTGGCACGGATA +CACATCCCATGGGGCACATGGAGTAGCGGTGGCAGCAGACCTTAAGAGCACTCAAGAGGCCATAAACAAG +ATAACAAAAAATCTCAACTCTTTGAGTGAGCTGGAAGTAAAGAATCTTCAAAGACTAAGCGGTGCCATGG +ATGAACTCCACAACGAAATACTAGAACTAGATGAGAAAGTGGATGATCTCAGAGCTGATACAATAAGCTC +ACAAATAGAACTCGCAGTCCTGCTTTCCAATGAAGGAATAATAAACAGTGAAGATGAACATCTCTTGGCG +CTTGAAAGAAAGCTGAAGAAAATGCTGGGCCCCTCTGCTGTAGAGATAGGGAATGGATGCTTTGAAACCA +AACACAAGTGCAACCAGACCTGTCTCGACAGAATAGCTGCTGGTACCTTTGATGCAGGAGAATTTTCTCT +CCCCACCTTTGATTCACTGAATATTACTGCTGCATCTTTAAATGACGATGGATTGGATAATCATACTATA +CTGCTTTACTACTCAACTGCTGCCTCCAGTTTGGCTGTAACACTGATGATAGCTATCTTTGTTGTTTATA +TGGTCTCCAGAGACAATGTTTCTTGCTCCATCTGTCTATAAGGGAAGTTAAGCCCTGTATTTTCCTTTAT +TGTAGTGCTTGTTTACTTGTTGTCATTACAAAGAAACGTTATTGAAAAATGCTCTTGTTACTACT diff --git a/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/sequences.fasta b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/sequences.fasta new file mode 100644 index 00000000..24a9f8b1 --- /dev/null +++ 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00000000..a9af3dfd --- /dev/null +++ b/data/datasets/flu_vic_ha/references/KX058884/versions/2023-11-18T12:00:00Z/files/virus_properties.json @@ -0,0 +1,26 @@ +{ + "schemaVersion": "1.10.0", + "nucMutLabelMap": {}, + "nucMutLabelMapReverse": {}, + "aaMotifs": [ + { + "name": "glycosylation", + "nameShort": "Glyc.", + "nameFriendly": "Glycosylation", + "description": "N-linked glycosylation motifs (N-X-S/T with X any amino acid other than P)", + "includeGenes": [ + { + "gene":"HA1", + "ranges":[] + }, + { + "gene":"HA2", + "ranges":[{"begin":0, "end":186}] + } + ], + "motifs": [ + "N[^P][ST]" + ] + } + ] +} \ No newline at end of file diff --git a/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..a1ce3b32 --- /dev/null +++ b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,4 @@ +##gff-version 3 +##sequence-region CY073894.1 1 1401 +CY073894.1 annotation remark 1 1401 . . . accessions=CY073894;data_file_division=VRL;date=25-JUL-2016;keywords=;molecule_type=cRNA;organism=Influenza B virus %28B/Brisbane/60/2008%29;references=location: %5B0:1401%5D%0Aauthors: Sabaiduc%2CS.%2C Skowronski%2CD.%2C Petric%2CM. and Chan%2CT.%0Atitle: %0Ajournal: Unpublished%0Amedline id: %0Apubmed id: %0Acomment:,location: %5B0:1401%5D%0Aauthors: Sabaiduc%2CS.%2C Skowronski%2CD.%2C Gardy%2CJ.%2C Petric%2CM. and Chan%2CT.%0Atitle: Direct Submission%0Ajournal: Submitted %2816-SEP-2010%29 Genome Research Laboratory%2C British Columbia Centre for Disease Control%2C 655 West 12th Ave.%2C Vancouver%2C BC V5Z4R4%2C Canada%0Amedline id: %0Apubmed id: %0Acomment:;sequence_version=1;source=Influenza B virus %28B/Brisbane/60/2008%29;taxonomy=Viruses,Riboviria,Orthornavirae,Negarnaviricota,Polyploviricotina,Insthoviricetes,Articulavirales,Orthomyxoviridae,Betainfluenzavirus;topology=linear +CY073894.1 feature gene 1 1401 . + . codon_start=1;gene=NA;gene_name=NA;product=neuraminidase;protein_id=ADN32819.1;translation=MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLKFSPTEITAPTMPLDCANASNVQAVNRSATKGVTLLLPEPEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFIACGPNECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKVKYGEAYTDTYHSYANKILRTQESACNCIGGNCYLMITDGSASGVSECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTDTYLDTPRPNDGSITGPCESNGDKGSGGIKGGFVHQRMESKIGRWYSRTMSKTERMGMGLYVKYDGDPWADSDALAFSGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL diff --git a/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..a0219afe --- /dev/null +++ b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,33 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15, + "weightLabeledSubstitutions": 2, + "weightReversionSubstitutions": 1, + "weightUnlabeledSubstitutions": 1 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..1bdc8402 --- /dev/null +++ b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,25 @@ +>CY073894.1 Influenza B virus (B/Brisbane/60/2008) segment 6 sequence +ATGCTACCTTCAACTATACAAACGTTAACCCTATTTCTCACATCAGGGGGAGTATTATTA +TCACTATATGTGTCAGCTTCATTATCATACTTACTATATTCGGATATATTGCTAAAATTC +TCACCAACAGAAATAACTGCACCAACAATGCCATTGGATTGTGCAAACGCATCAAATGTT +CAGGCTGTGAACCGTTCTGCAACAAAAGGGGTGACACTTCTTCTCCCAGAACCGGAGTGG +ACATACCCGCGTTTATCTTGCCCGGGCTCAACCTTTCAGAAAGCACTCCTAATTAGCCCT +CATAGATTCGGAGAAACCAAAGGAAACTCAGCTCCCTTGATAATAAGGGAACCTTTTATT +GCTTGTGGACCAAATGAATGCAAACACTTTGCTCTAACCCATTATGCAGCCCAACCAGGG +GGATACTACAATGGAACAAGAGGAGACAGAAACAAGCTGAGGCATCTAATTTCAGTCAAA +TTGGGCAAAATCCCAACAGTAGAAAACTCCATTTTCCACATGGCAGCATGGAGCGGGTCC +GCGTGCCATGATGGTAAGGAATGGACATATATCGGAGTTGATGGCCCTGACAATAATGCA +TTGCTCAAAGTAAAATATGGAGAAGCATATACTGACACATACCATTCCTATGCAAACAAA +ATCCTAAGAACACAAGAAAGTGCCTGCAATTGCATCGGGGGAAATTGTTATCTTATGATA +ACTGATGGCTCAGCTTCAGGTGTTAGTGAATGCAGATTTCTTAAGATTCGAGAGGGCCGA +ATAATAAAAGAAATATTTCCAACAGGAAGAGTAAAACACACTGAGGAATGCACATGCGGA +TTTGCCAGCAATAAAACCATAGAATGTGCCTGTAGAGATAACAGTTACACAGCAAAAAGA +CCTTTTGTCAAATTAAACGTGGAGACTGATACAGCAGAAATAAGATTGATGTGCACAGAT +ACTTATTTGGACACCCCCAGACCAAACGATGGAAGCATAACAGGCCCTTGTGAATCTAAT +GGGGACAAAGGGAGTGGAGGCATCAAGGGAGGATTTGTTCATCAAAGAATGGAATCCAAG +ATTGGAAGGTGGTACTCTCGAACGATGTCTAAAACTGAAAGGATGGGGATGGGACTGTAT +GTCAAGTATGATGGAGACCCATGGGCTGACAGTGATGCCCTAGCTTTTAGTGGAGTAATG +GTTTCAATGAAAGAACCTGGTTGGTACTCCTTTGGCTTCGAAATAAAAGATAAGAAATGC +GATGTCCCCTGTATTGGGATAGAGATGGTACATGATGGTGGAAAAGAGACTTGGCACTCA +GCAGCAACAGCCATTTACTGTTTAATGGGCTCAGGACAGCTGCTGTGGGACACTGTCACA +GGTGTTGACATGGCTCTGTAA diff --git a/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/sequences.fasta b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/sequences.fasta new file mode 100644 index 00000000..378ef592 --- /dev/null +++ b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/sequences.fasta @@ -0,0 +1,1188 @@ +>B/Pennsylvania/5/2022 +atcttctcaaaactgaagtagataggccaaaaatgaacaatgctaccttcaactatacaa +acgttaaccctatttctcacatcagggggagtattattatcactatatgtgtcagcttca +ttatcatacttactatattcggatatattgctaaaattctcacaaacagaaataactgca +ccaacaatgccattggattgtgcaaacgcatcaaatgttcaagctgtgaaccgttctgca +acaaaaggggcgacacttcttctcccagaaccggagtggacatacccgcgtttatcttgc +ccgggctcaacctttcagaaagcactcctaattagccctcatagattcggagaaaccaaa +ggaaactcagctcccttgataataagggaaccttttgttgcttgtggaccaaatgaatgc 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"branch_attrs": {"mutations": {}}, "children": [{"name": "B/HongKong/7574/2023", "node_attrs": {"div": 0.02847, "EPI_ISL": {"value": "EPI2757885"}, "country": {"value": "hong_kong"}, "strainName": {"value": "B/HongKong/7574/2023"}, "date": {"value": "2023-07-13"}, "clade_membership": {"value": "B.7.1"}, "region": {"value": "china"}}, "branch_attrs": {"mutations": {}}}, {"name": "B/Mauritius/P10571_I-20/2023", "node_attrs": {"div": 0.02847, "EPI_ISL": {"value": "EPI2659848"}, "country": {"value": "mauritius"}, "strainName": {"value": "B/Mauritius/P10571_I-20/2023"}, "date": {"value": "2023-02-23"}, "clade_membership": {"value": "B.7.1"}, "region": {"value": "africa"}}, "branch_attrs": {"mutations": {}}}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}]}} \ No newline at end of file diff --git a/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/virus_properties.json b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/virus_properties.json new file mode 100644 index 00000000..3bfeb859 --- /dev/null +++ b/data/datasets/flu_vic_na/references/CY073894/versions/2023-11-18T12:00:00Z/files/virus_properties.json @@ -0,0 +1,22 @@ +{ + "schemaVersion": "1.10.0", + "nucMutLabelMap": {}, + "nucMutLabelMapReverse": {}, + "aaMotifs": [ + { + "name": "glycosylation", + "nameShort": "Glyc.", + "nameFriendly": "Glycosylation", + "description": "N-linked glycosylation motifs (N-X-S/T with X any amino acid other than P)", + "includeGenes": [ + { + "gene":"NA", + "ranges":[{"begin":33, "end":466}] + } + ], + "motifs": [ + "N[^P][ST]" + ] + } + ] +} \ No newline at end of file diff --git a/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/genemap.gff b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/genemap.gff new file mode 100644 index 00000000..3dbd8893 --- /dev/null +++ b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/genemap.gff @@ -0,0 +1,5 @@ +##gff-version 3 +##sequence-region JN993010.1 1 1755 +JN993010.1 feature gene 1 45 . + . gene_name=SigPep +JN993010.1 feature gene 46 1083 . + . gene_name=HA1 +JN993010.1 feature gene 1084 1755 . + . gene_name=HA2 diff --git a/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/primers.csv b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/primers.csv new file mode 100644 index 00000000..a3d2810a --- /dev/null +++ b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/primers.csv @@ -0,0 +1 @@ +Country (Institute),Target,Oligonucleotide,Sequence diff --git a/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/qc.json b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/qc.json new file mode 100644 index 00000000..70ecbad9 --- /dev/null +++ b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/qc.json @@ -0,0 +1,30 @@ +{ + "schemaVersion": "1.2.0", + "privateMutations": { + "enabled": true, + "typical": 5, + "cutoff": 15 + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "snpClusters": { + "enabled": false, + "windowSize": 100, + "clusterCutOff": 5, + "scoreWeight": 50 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "frameShifts": { + "enabled": true + }, + "stopCodons": { + "enabled": true, + "ignoredStopCodons": [] + } +} diff --git a/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/reference.fasta b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/reference.fasta new file mode 100644 index 00000000..ace128e2 --- /dev/null +++ b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/reference.fasta @@ -0,0 +1,2 @@ +>JN993010.1 Influenza B virus (B/Wisconsin/01/2010) segment 4 hemagglutinin (HA) gene, complete cds +ATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAATGCAGATCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGCTACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATCTTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAACTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGCTAAAGCTTCAATACTCCACGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCACGACAGAACAAAAATCAGGCAACTACCCAATCTTCTCAGAGGATATGAAAATATCAGGTTATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAACCTCAGGATCTTGCCCTAACGCTACCAGTAAAATCGGATTTTTTGCAACAATGGCTTGGGCTGTCCCAAAGGACAACTACAAAAATGCAACGAACCCACTAACAGTAGAAGTACCATACATTTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTCCATTCAGATAACAAAACCCAAATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCTAATGGAGTAACCACACATTATGTTTCTCAGATTGGCGACTTCCCAGATCAAACAGAAGACGGAGGACTACCACAAAGCGGCAGAATTGTTGTTGATTACATGATGCAAAAACCTGGGAAAACAGGAACAATTGTCTATCAAAGAGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAGCAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAAAATACGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAGAACATGCAAAAGCCATAGGAAATTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCCTGCAAAACTATTGAAGGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGGATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGCAGTGGCGGCAGACCTTAAGAGTACACAAGAAGCTATAAATAAGATAACAAAAAATCTCAATTCTTTGAGTGAGCTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACTCCACAACGAAATACTCGAGCTGGATGAGAAAGTGGATGATCTCAGAGCTGACACTATAAGCTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGACGAGCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACATAGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGCTGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGATTCATTGAACATTACTGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAACTGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTCCAGAGACAACGTTTCATGCTCCATCTGTCTATAA diff --git a/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/sequences.fasta b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/sequences.fasta new file mode 100644 index 00000000..1de48ab7 --- /dev/null +++ b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/sequences.fasta @@ -0,0 +1,1280 @@ +>MT242633 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAAGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACACTACCAGTAAAATTGGATTCTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACTCATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CATAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCAGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTCGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTTGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT242655 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGATGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCTTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATATAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCGGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTGATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTCAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTAGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT242755 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAATTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAATGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTRGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT242779 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTCCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCGGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTGATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTAGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT242787 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTCCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCGGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTGATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTAGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT242867 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGAATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT242931 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTATCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGAATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTGAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT242939 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTATCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGAATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTGAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243139 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGAGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCGGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGGAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAGGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAGGTGGATGACCTCAGAGCTGACACTATAAG +TTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGGATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243195 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTTAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAAGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACTCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCAAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +TTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAGGTTCACCTCATCTGCTAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCCGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +TGGTGGACTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAGCTATTGAAGGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATTGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTCGTATTTTCCTT +TATTGTGGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243275 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAAGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243291 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAAMTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243827 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGATT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243835 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243867 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAAGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTCACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTCTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACTCATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTCGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTTGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243907 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTCCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCGGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTRTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTGATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT243915 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTCCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCGGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTGATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT306721 +ATTTTCTAATATCCACAAAATGAAGGCAATAGTTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAAGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTCTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGATCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACTCATTATGTTTCTCAGATTGGTGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTCGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTTGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT306796 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +CACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACTCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCAAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +TTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAAAGCCTCTATGGAGACTCAAATCCTCAAAGGTTCACCTCATCTGCTAATGGCGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCCGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +TGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAGCTATTGAAGGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATTGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTGACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTCGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT306804 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTTAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCCGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACTCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCAAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +TTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTCCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAGGTTCACCTCATCTGCTAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGATTTCCCAGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCCGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +TGGTGGACTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAGCTATTGAAGGAAAAGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATTGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTTGGCCTCGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT306908 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGMGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTGTTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT307148 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCMAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCCCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGCTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTGGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT314713 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGAATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT315169 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT315817 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT315953 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT342821 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGATGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCTTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATATAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCGGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTGATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAAAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT342946 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTAATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAACGTGTGTGGGGACCACACCTTCTGC +TAAAGCCTCAATACTCCATGAGGTCAGACCTGTTACATCCGGATGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTGCCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCAAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAATACCATACAT +TTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAGATCCTCAAAAGTTCACCTCATCTGCTAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCAGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAGAGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTGAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAGGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTTCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTAGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAGAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGCCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTCTTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT342999 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAAGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACACTACCAGTAAAATTGGATTCTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACTCATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTCGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTTGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT343532 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +CACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACTCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCAAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +TTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAGGTTCACCTCATCTGCTAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAGATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCCGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +TGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAGCTATTGAAGGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAGTAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATTGC +TGCTGGCACCTTTAATGCAGGAGAATTTTTTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTGACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTCGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT343741 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAAGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATATGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTCTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACTCATTATGTTTCTCAGATTGGTGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAAGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTCGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTTGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT343774 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAGGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAAACCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAAGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT375810 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGAGGACCCTACAGACTTGGAAC +CTCAAGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAATTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCAACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT423065 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA +AATGAAGAGCCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCCAATGGAGT +GACCACACATTATGTTTCTCAGATTGGCGACTTCCCAAATCAAACAGAAGACGGAGGACT +ACCACAAAGCGGCAGAATTGTTGTTGATTACATGGTGCAAAAACCTGGGAAAACAGGAAC +AATTGTCTATCAAAGGGGTGTTTTGTTGCCTCAAAAGGTGTGGTGCGCGAGTGGCAGGAG +CAAAGTAATAAAGGGGTCATTGCCTTTAATTGGTGAAGCAGATTGCCTTCATGAAGAATA +CGGTGGATTAAACAAAAGCAAGCCTTACTACACAGGAAAACATGCAAAAGCCATAGGAAA +TTGCCCAATATGGGTAAAAACACCTTTGAAGCTTGCCAATGGAACCAAATATAGACCTCC +TGCAAAACTATTGAAAGAAAGGGGTTTCTTCGGAGCTATTGCTGGTTTCCTAGAAGGAGG +ATGGGAAGGAATGATTGCAGGTTGGCACGGATACACATCTCACGGAGCACATGGAGTGGC +AGTGGCGGCAGACCTTAAAAGTACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA +TTCTTTGAGTGAACTAGAAGTAAAGAACCTTCAAAGACTAAGTGGTGCCATGGATGAACT +CCACAACGAAATACTTGAGCTGGATGAAAAAGTGGATGACCTCAGAGCTGACACTATAAG +CTCACAAATAGAACTTGCAGTCTTGCTTTCCAACGAAGGAATAATAAACAGTGAAGATGA +GCATCTATTGGCACTTGAGAGAAAACTAAAGAAAATGCTGGGTCCCTCTGCTGTAGACAT +AGGAAACGGATGCTTCGAAACCAAACACAAATGCAACCAGACCTGCTTAGACAGGATAGC +TGCTGGCACCTTTAATGCAGGAGAATTTTCTCTCCCCACTTTTGACTCATTGAACATTAC +TGCTGCATCTTTAAATGATGATGGATTGGATAACCATACTATACTGCTCTATTACTCAAC +TGCTGCTTCTAGTTTGGCTGTAACATTAATGCTAGCTATTTTTATTGTTTATATGGTCTC +CAGAGACAACGTTTCATGCTCCATCTGTCTATAAGGAAGGTTAGGCCTTGTATTTTCCTT +TATTGTAGTGCTTGTTTGCTTGTCATCATTACAAAGAAACGTTATTGAAAAAT +>MT423082 +ATTTTCTAATATCCACAAAATGAAGGCAATAATTGTACTACTCATGGTAGTAACATCCAA +TGCAGACCGAATCTGCACTGGGATAACATCTTCAAACTCACCTCATGTGGTCAAAACAGC +TACTCAAGGGGAGGTCAATGTGACTGGCGTGATACCACTGACAACAACACCAACAAAATC +TTATTTTGCAAATCTCAAAGGAACAAGGACCAGAGGGAAACTATGCCCGGACTGTCTCAA +CTGTACAGATCTGGATGTGGCCTTGGGCAGGCCAATGTGTGTGGGGACCACACCTTCTGC +TAAAGCTTCAATACTCCATGAGGTCAGACCTGTTACATCCGGGTGCTTTCCTATAATGCA +CGACAGAACAAAAATCAGACAACTACCCAATCTTCTCAGAGGATACGAAAAGATCAGGTT +ATCAACCCAAAACGTTATCGATGCAGAAAAAGCACCAGGGGGACCCTACAGACTTGGAAC +CTCAGGATCTTGCCCTAACGCTACCAGTAAAATTGGATTTTTTGCAACAATGGCTTGGGC +TGTTCCGAAGGACAACTACAAAAATGCAACGAACCCACAAACAGTGGAAGTACCATACAT +CTGTACAGAAGGGGAAGACCAAATTACTGTTTGGGGGTTTCATTCGGATAACAAAACCCA 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a/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tag.json b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tag.json new file mode 100644 index 00000000..e05ca8d1 --- /dev/null +++ b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tag.json @@ -0,0 +1,25 @@ +{ + "tag": "2023-11-18T12:00:00Z", + "comment": "fix: tree now uses correct genemap", + "compatibility": { + "nextcladeCli": { + "min": "1.10.0", + "max": null + }, + "nextcladeWeb": { + "min": "1.13.0", + "max": null + } + }, + "enabled": true, + "files": { + "geneMap": "genemap.gff", + "primers": "primers.csv", + "qc": "qc.json", + "reference": "reference.fasta", + "sequences": "sequences.fasta", + "tree": "tree.json", + "virusPropertiesJson": "virus_properties.json" + }, + "metadata": {} +} diff --git a/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tree.json b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tree.json new file mode 100644 index 00000000..07fdc868 --- /dev/null +++ b/data/datasets/flu_yam_ha/references/JN993010/versions/2023-11-18T12:00:00Z/files/tree.json @@ -0,0 +1 @@ +{"version": "v2", "meta": {"title": "Nextclade reference tree for Influenza type:yam segment:ha with root JN993010 built on 2023-11-18", "updated": "2023-11-18", "build_url": "https://github.com/neherlab/nextclade_data_workflows", "data_provenance": [{"name": "GISAID"}], "maintainers": [{"name": "Cornelius Roemer", "url": "https://neherlab.org"}, {"name": "Richard Neher", "url": "https://neherlab.org"}], "display_defaults": {"color_by": "clade_membership", "distance_measure": "div", "branch_label": "clade"}, "genome_annotations": {"HA1": {"end": 1083, "seqid": "dataset_config/yam/ha/JN993010/annotation.gff", "start": 46, "strand": "+", "type": "gene"}, "HA2": {"end": 1755, "seqid": "dataset_config/yam/ha/JN993010/annotation.gff", "start": 1084, "strand": "+", "type": "gene"}, "SigPep": {"end": 45, "seqid": "dataset_config/yam/ha/JN993010/annotation.gff", "start": 1, "strand": "+", "type": "gene"}, "nuc": {"end": 1755, "start": 1, "strand": "+", "type": "source"}}, "colorings": [{"key": "clade_membership", "title": "Clade", "type": "categorical"}, {"key": "gt", "title": "Genotype", "type": "categorical"}, {"key": "region", "title": "Region", "type": "categorical", "scale": [["china", "#4042C7"], ["southeast_asia", "#4274CE"], ["south_asia", "#5199B7"], ["japan_korea", "#69B091"], ["oceania", "#88BB6C"], ["west_asia", "#ADBD51"], ["africa", "#CEB541"], ["europe", "#E39B39"], ["south_america", "#E56C2F"], ["north_america", "#DC2F24"]]}, {"key": "strainName", "title": "strainName", "type": "categorical"}, {"key": "country", "title": "Country", "type": "categorical"}, {"key": "date", "title": "Sample Date", "type": "ordinal"}, {"key": "EPI_ISL", "title": "EPI_ISL", 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