From c2b4f3d456f576c5791d96699ada96176980d924 Mon Sep 17 00:00:00 2001
From: Trevor Bedford <trevor@bedford.io>
Date: Wed, 11 Sep 2024 12:57:42 -0700
Subject: [PATCH] Update clade definitions

Previous clades including 23B, 23C, ..., 23I are all now extinct or rare enough that extant examples are getting lumped into the "other" bin. With the current clade definitions these extinct clades are taking up all the color bandwidth and the three relevant clades of 24A, 24B and 24C are all similar shades of red.

This commit removes extinct clades and updates colors for surviving clades.
---
 config/config.yaml | 42 +++---------------------------------------
 1 file changed, 3 insertions(+), 39 deletions(-)

diff --git a/config/config.yaml b/config/config.yaml
index 1b73163..ca11025 100644
--- a/config/config.yaml
+++ b/config/config.yaml
@@ -96,51 +96,15 @@ clade_definitions:
   - clade: "24C"
     display_name: "24C (KP.3)"
     defining_lineage: "KP.3"
-    color: '#DC2F24'
+    color: '#CBB742'
   - clade: "24B"
     display_name: "24B (JN.1.11.1)"
     defining_lineage: "JN.1.11.1"
-    color: '#E4632E'
+    color: '#7EB876'
   - clade: "24A"
     display_name: "24A (JN.1)"
     defining_lineage: "JN.1"
-    color: '#E69136'
-  - clade: "23I"
-    display_name: "23I (BA.2.86)"
-    defining_lineage: "BA.2.86"
-    color: '#D9AD3D'
-  - clade: "23H"
-    display_name: "23H (HK.3)"
-    defining_lineage: "HK.3"
-    color: '#C1BA47'
-  - clade: "23G"
-    display_name: "23G (XBB.1.5.70)"
-    defining_lineage: "XBB.1.5.70"
-    color: '#A2BE57'
-  - clade: "23F"
-    display_name: "23F (EG.5.1)"
-    defining_lineage: "EG.5.1"
-    color: '#83BA70'
-  - clade: "23E"
-    display_name: "23E (XBB.2.3)"
-    defining_lineage: "XBB.2.3"
-    color: '#69B091'
-  - clade: "23D"
-    display_name: "23D (XBB.1.9)"
-    defining_lineage: "XBB.1.9"
-    color: '#549DB2'
-  - clade: "23C"
-    display_name: "23C (CH.1.1)"
-    defining_lineage: "CH.1.1"
-    color: '#4580CA'
-  - clade: "23B"
-    display_name: "23B (XBB.1.16)"
-    defining_lineage: "XBB.1.16"
-    color: '#3E58CF'
-  - clade: "22F"
-    display_name: "22F (XBB)"
-    defining_lineage: "XBB"
-    color: '#462EB9'
+    color: '#4988C5'
   - clade: "other"
     display_name: "other"
     defining_lineage: False