From 1212730df166e51a3420aaf0b2a876698fb7b5d3 Mon Sep 17 00:00:00 2001 From: John Huddleston Date: Tue, 19 Sep 2023 13:28:38 -0700 Subject: [PATCH] Update change log --- CHANGES.md | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/CHANGES.md b/CHANGES.md index 2cf2ff234..388368a7d 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -5,15 +5,20 @@ ### Features * Support treetime 0.11.* [#1310][] (@corneliusroemer) -* Allow minimal export using only a (newick) tree in `augur export v2`. [#1299][] (@jameshadfield) +* export: Allow minimal export using only a (newick) tree in `augur export v2`. [#1299][] (@jameshadfield) * A number of schema updates and improvements [#1299][] (@jameshadfield) * We now require all nodes to have `node_attrs` on them with one of `div` or `num_date` present * Some never-used properties are removed from the schemas, including a pattern for defining nucleotide INDELs which was never used by augur or auspice. * Tip label defaults are now settable within the auspice-config JSON * Empty colorings definitions are allowed (the tree will be grey in Auspice) -[#1310]: https://github.com/nextstrain/augur/pull/1310 +### Bug fixes + +* ancestral: Export amino acid sequences inferred for the root node of the tree in the node data JSON output for compatibility with `augur translate` output. [#1317][] (@huddlej) + [#1299]: https://github.com/nextstrain/augur/pull/1299 +[#1310]: https://github.com/nextstrain/augur/pull/1310 +[#1317]: https://github.com/nextstrain/augur/pull/1317 ## 23.0.0 (5 September 2023)