actions.yml

name: CI

on:
  pull_request:
  push:
    branches: main
    tags: ['v*']
  workflow_dispatch:


jobs:
  tests:
    runs-on: ubuntu-latest
    steps:
    - name: Checkout Repository
      uses: actions/checkout@v4

    - name: Set up MicroMamba
      uses: mamba-org/setup-micromamba@v1
      with:
        environment-file: environment.yml
        condarc: |
          channels:
            - conda-forge
            - default
        cache-environment: true

    - name: Unit test with code coverage
      shell: bash -l {0}
      run: python -m pytest -vv --cov=postprocessing --cov=scripts --cov-report=xml --cov-report=term

    - name: Upload coverage reports to Codecov
      uses: codecov/codecov-action@v4
      if:
        github.actor != 'dependabot[bot]'
      env:
        CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

  integration-tests:
    runs-on: ubuntu-latest
    needs: tests
    steps:
    - name: Checkout Repository
      uses: actions/checkout@v4

    - name: Set up MicroMamba
      uses: mamba-org/setup-micromamba@v1
      with:
        environment-file: environment.yml
        condarc: |
          channels:
            - conda-forge
            - default
        cache-environment: true

    - name: Start docker containers
      run: docker compose -f tests/integration/docker-compose.yml up --build -d

    - name: Sleep, wait for containers to start up
      run: sleep 2

    - name: Run integration tests
      shell: bash -l {0}
      run: python -m pytest tests/integration

    - name: Stop but dont remove docker containers
      # Stopping the containers allows the code coverage to be written to disk
      run: docker compose -f tests/integration/docker-compose.yml stop

    - name: Copy code coverage out of docker container
      run: docker cp integration-post_processing_agent-1:/opt/postprocessing/ /tmp/

    - name: Combine and show code coverage
      shell: bash -l {0}
      run: |
        cd /tmp/postprocessing
        coverage combine
        coverage xml
        cp coverage.xml $OLDPWD
        coverage report

    - name: Bring down docker containers completely now
      # This will completely remove the containers
      run: docker compose -f tests/integration/docker-compose.yml down

    - name: Upload coverage reports to Codecov
      uses: codecov/codecov-action@v4
      if:
        github.actor != 'dependabot[bot]'
      env:
        CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

  rpm:
    runs-on: ubuntu-latest
    needs: integration-tests

    steps:
    - name: Checkout Repository
      uses: actions/checkout@v4

    - name: Build RPM inside Docker
      run: |
        docker build --tag postprocess -f Dockerfile .
        fname=`docker run --name postprocess  postprocess ls /root/rpmbuild/RPMS/noarch`
        docker cp postprocess:/root/rpmbuild/RPMS/noarch/$fname .
        one=${fname#*postprocessing-}
        two=${one%.noarch*}
        echo "{version}={$two}" >> $GITHUB_OUTPUT
        echo "{fname}={$fname}" >> $GITHUB_OUTPUT
      continue-on-error: false

    # now run a couple integration test with RPM installed package
    - name: Set up MicroMamba
      uses: mamba-org/setup-micromamba@v1
      with:
        environment-file: environment.yml
        condarc: |
          channels:
            - conda-forge
            - default
        cache-environment: true

    - name: Start docker containers
      run: docker compose -f tests/integration/docker-compose-rpm.yml up --build -d

    - name: Sleep, wait for containers to start up
      run: sleep 2

    - name: Run integration tests
      shell: bash -l {0}
      run: python -m pytest -k "test_heartbeat or test_missing_data"

    - name: Bring down docker containers
      run: docker compose -f tests/integration/docker-compose-rpm.yml down