diff --git a/docs/source/ephys_at_swc/index.md b/docs/source/ephys_at_swc/index.md index f668a07..7fdb193 100644 --- a/docs/source/ephys_at_swc/index.md +++ b/docs/source/ephys_at_swc/index.md @@ -12,11 +12,12 @@ please don't hesitate to get in contact! See the [Community](community.md) page for more details. -This page is maintained by the -[Neuroinformatics Unit](https://neuroinformatics.dev). The -[Roadmap](roadmap.md) -lays out our plans for developing community -analysis tools at the SWC. +This page is maintained by the [Neuroinformatics Unit](https://neuroinformatics.dev). +We are focused on building community tools to automate +and centralise electrophysiology analysis. If you'd +like to read more about our plans, please visit our +[Roadmap](). + ::::{grid} 1 2 2 2 :gutter: 3 diff --git a/docs/source/ephys_at_swc/roadmap.md b/docs/source/ephys_at_swc/roadmap.md deleted file mode 100644 index b7bede1..0000000 --- a/docs/source/ephys_at_swc/roadmap.md +++ /dev/null @@ -1,49 +0,0 @@ -# Roadmap - -The ultimate goal of the NIU is to centralise and automate -electrophysiology preprocessing and analysis at the SWC. We aim to move away -from researchers having to create their own customized pipelines. - -In the short-term, we are focusing on assisting researchers use existing community -tools to build their electrophysiology pipelines, encouraging the use of -[SpikeInterface](https://github.com/SpikeInterface) -We will provide support, advice, and examples from across the -SWC community. We are working closely with -the SpikeInterface team to implement the tools -required for researchers at the SWC. - -Concurrently, we are developing centralise tools to facilitate -automated analysis and minimize the need for custom scripts. -Initially, this involves standardizing data organization across the SWC. -To this end, we have released -[NeuroBlueprint](https://neuroblueprint.neuroinformatics.dev/) -and -[datashuttle](https://datashuttle.neuroinformatics.dev/) to promote -project folder standardisation. -We are now building -[spikewrap](https://github.com/neuroinformatics-unit/spikewrap) -as a centralised tool for ephys preprocessing and analysis with SpikeInterface. -This aims to require only setting a configuration file specifying the type of analysis you'd like to run. - -## Timeline - -A rough timeline for this roadmap is below. We are very keen to make sure we are -heading in the right direction, so please get in contact -with any feedback on this roadmap and your priorities. - -### Q3 2024 - -Working directly with SpikeInterface to support their initiatives in: -- Improving the documentation -- Upgrading their interface and stabilising the API -- Adding new features (those requested by SWC researchers) - -### Q4 2024 - -- Handle cross-session alignment in SpikeInterface (a widely requested -feature from researchers at the SWC). - -### Q2 2025 - -- Beta version of -[spikewrap](https://github.com/neuroinformatics-unit/spikewrap).