pr_deploy.yaml

name: Pr - Preview
on:
  pull_request:
    types: [opened, reopened, synchronize]
jobs:
  dev-pr-create-s3:
    if: github.event.pull_request.draft == false

    runs-on: ubuntu-latest
    environment: dev
    steps:
      - name: Checkout
        uses: actions/checkout@v3

      - name: Restore Nanoc Cache
        id: cache-nanoc-tmp
        uses: actions/cache/restore@v3
        with:
          path: tmp
          key: ${{ runner.os }}-nanoc-tmp

      - name: Restore Site Output Cache
        id: cache-site-output
        uses: actions/cache/restore@v3
        with:
          path: output
          key: ${{ runner.os }}-site-output

      - name: Set up ruby
        uses: ruby/setup-ruby@ec02537da5712d66d4d50a0f33b7eb52773b5ed1
        with:
          ruby-version: "2.6.5"

      - name: Install dependencies
        run: bundle install --jobs 4 --retry 3

      - name: build website
        run: rake

      - name: Create Bucket
        run: |
          if aws s3api head-bucket --bucket pr-preview-bioconductor-pr${{github.event.number}} 2>/dev/null; then
            echo "Bucket already exists"
          else
            aws s3 mb s3://pr-preview-bioconductor-pr${{github.event.number}}
            aws s3api delete-public-access-block --bucket pr-preview-bioconductor-pr${{github.event.number}}
            aws s3api delete-bucket-ownership-controls --bucket pr-preview-bioconductor-pr${{github.event.number}}
            aws s3api put-bucket-website --bucket pr-preview-bioconductor-pr${{github.event.number}}  \
              --website-configuration '{"IndexDocument":{"Suffix":"index.html"},"ErrorDocument":{"Key":"404.html"}}'
          fi
        env:
          AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }}
          AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
          AWS_REGION: "us-east-1"
      - name: Deploy S3 Website
        uses: danburtenshaw/s3-website-pr-action@v2.0.1
        with:
          bucket-prefix: "pr-preview-bioconductor"
          folder-to-copy: "./output"
        env:
          AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }}
          AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
  kpi_metrics:
    needs: dev-pr-create-s3
    permissions:
      pull-requests: write
    name: All KPI metrics
    runs-on: ubuntu-latest
    steps:
      - name: checkout
        uses: actions/checkout@v3
      - name: Setup Node.js environment
        uses: actions/setup-node@v3.7.0
        with:
          node-version: 18
      - name: install psi and axe
        run: |
          npm install psi
          npm install @axe-core/cli
      - name: run desktop psi
        run: |
          echo "DESKTOP_PSI_RESULTS<<EOF" >> $GITHUB_ENV
          echo "$(node PageSpeed.js url=http://pr-preview-bioconductor-pr${{github.event.number}}.s3-website-us-east-1.amazonaws.com,strategy=desktop,threshold=50,apiKey=none)" >> $GITHUB_ENV
          echo "EOF" >> $GITHUB_ENV
      - name: run mobile psi
        run: |
          echo "MOBILE_PSI_RESULTS<<EOF" >> $GITHUB_ENV
          echo "$(node PageSpeed.js url=http://pr-preview-bioconductor-pr${{github.event.number}}.s3-website-us-east-1.amazonaws.com,strategy=mobile,threshold=50,apiKey=none)" >> $GITHUB_ENV
          echo "EOF" >> $GITHUB_ENV
      - name: add_comment_pageSpeed
        uses: mshick/add-pr-comment@v2
        with:
          message: |
            ${{env.DESKTOP_PSI_RESULTS}}
            ${{env.MOBILE_PSI_RESULTS}}
          message-id: psi
      - name: run axe accesibility test
        run: |
          echo "AXE_RESULTS<<EOF" >> $GITHUB_ENV
          echo "$(npx axe http://pr-preview-bioconductor-pr${{github.event.number}}.s3-website-us-east-1.amazonaws.com)" >> $GITHUB_ENV
          echo "EOF" >> $GITHUB_ENV
      - name: add_comment_axe
        uses: mshick/add-pr-comment@v2
        with:
          message: ${{env.AXE_RESULTS}}
          message-id: axe