diff --git a/bgruening.yaml.lock b/bgruening.yaml.lock index 88281dd9..5566d232 100644 --- a/bgruening.yaml.lock +++ b/bgruening.yaml.lock @@ -1027,6 +1027,7 @@ tools: owner: bgruening revisions: - 08c658e9aa9e + - 7770a4bd42e2 - dab494dce303 tool_panel_section_label: Machine Learning - name: graphmap_align diff --git a/ecology.yaml.lock b/ecology.yaml.lock index 15ab2d17..d57cd931 100644 --- a/ecology.yaml.lock +++ b/ecology.yaml.lock @@ -1585,11 +1585,13 @@ tools: - name: ecoregion_geonearestneighbor owner: ecology revisions: + - 36637718c51d - 5cde56683579 tool_panel_section_label: Ecoregionalization - name: ecoregion_brt_analysis owner: ecology revisions: + - a56c413f3a98 - f0d6938d0451 - f8962f1c832a - fc621f3f8226 @@ -1597,6 +1599,7 @@ tools: - name: ecoregion_taxa_seeker owner: ecology revisions: + - 18c4cd785a74 - 788b118910a7 - 9dc992f80c25 - e3cd588fd14a @@ -1607,10 +1610,12 @@ tools: - 374555fc30bd - 3d750279158b - b38b954b92b9 + - c6b1bf7b0ac6 tool_panel_section_label: Ecoregionalization - name: ecoregion_cluster_estimate owner: ecology revisions: + - 001d7d101915 - 0f6542d0986e - 1b9522671e90 - e94a25eed489 @@ -1620,6 +1625,7 @@ tools: revisions: - 24a81631a8b5 - 32849c52aa54 + - 844b5bf84164 - edb8d19735a6 tool_panel_section_label: Ecoregionalization - name: map_shp diff --git a/tools_iuc.yaml.lock b/tools_iuc.yaml.lock index 5456bdc2..1fa6fef3 100644 --- a/tools_iuc.yaml.lock +++ b/tools_iuc.yaml.lock @@ -2156,6 +2156,7 @@ tools: - name: falco owner: iuc revisions: + - babbcf02d35c - da336e3ead38 - e462044ece67 - eee1a2f6abd8 @@ -9031,6 +9032,41 @@ tools: - c4db6ec33fec - fab6ff46e019 tool_panel_section_label: RNA Analysis +- name: seurat_preprocessing + owner: iuc + revisions: + - c3170652bd98 + tool_panel_section_label: RNA Analysis +- name: seurat_integrate + owner: iuc + revisions: + - 4341b8ff2a46 + tool_panel_section_label: RNA Analysis +- name: seurat_reduce_dimension + owner: iuc + revisions: + - e49429e8d6dd + tool_panel_section_label: RNA Analysis +- name: seurat_create + owner: iuc + revisions: + - d0c26c9430f2 + tool_panel_section_label: RNA Analysis +- name: seurat_plot + owner: iuc + revisions: + - 2622dd85416f + tool_panel_section_label: RNA Analysis +- name: seurat_data + owner: iuc + revisions: + - 50c5abeb08ba + tool_panel_section_label: RNA Analysis +- name: seurat_clustering + owner: iuc + revisions: + - 94f1b9c7286f + tool_panel_section_label: RNA Analysis - name: sleuth owner: iuc revisions: diff --git a/tools_q2d2.yaml.lock b/tools_q2d2.yaml.lock index 8a58e958..9a70cd5a 100644 --- a/tools_q2d2.yaml.lock +++ b/tools_q2d2.yaml.lock @@ -7,16 +7,19 @@ tools: revisions: - a0a48c15c573 - a8962b34c94e + - c4a4ba3c7a9c tool_panel_section_label: QIIME 2 - name: qiime2__alignment__mafft_add owner: q2d2 revisions: - 442d1a046fa6 - 4fde174f0118 + - 51e7e9d2c302 tool_panel_section_label: QIIME 2 - name: qiime2__alignment__mask owner: q2d2 revisions: + - 1d37aa0aed4f - 58797be8efd4 - e8bee857dc0d tool_panel_section_label: QIIME 2 @@ -24,6 +27,7 @@ tools: owner: q2d2 revisions: - c6780899249e + - cd98e4bb92ee - f92a9f40c7e1 tool_panel_section_label: QIIME 2 - name: qiime2__composition__ancom @@ -31,10 +35,12 @@ tools: revisions: - 4696fc685d83 - e3a9e7cb7b77 + - f072d901c63c tool_panel_section_label: QIIME 2 - name: qiime2__composition__ancombc owner: q2d2 revisions: + - 4b71e36cc3d2 - 9b2a68d3017f - fe99db171ce5 tool_panel_section_label: QIIME 2 @@ -42,11 +48,13 @@ tools: owner: q2d2 revisions: - 359aa4321add + - 45a7de813cd5 - 54caf7f5c410 tool_panel_section_label: QIIME 2 - name: qiime2__cutadapt__demux_paired owner: q2d2 revisions: + - 9b5a775806be - c6a8822e19f2 - d58b93d0a723 tool_panel_section_label: QIIME 2 @@ -55,11 +63,13 @@ tools: revisions: - d244802d52d0 - d8851a5b9360 + - fcb0c9bd84a3 tool_panel_section_label: QIIME 2 - name: qiime2__cutadapt__trim_paired owner: q2d2 revisions: - 4f340404bbf8 + - b2b61aecb444 - b7fc07bacdb2 tool_panel_section_label: QIIME 2 - name: qiime2__cutadapt__trim_single @@ -67,11 +77,13 @@ tools: revisions: - 1026d5863b7c - 42cd76be2cbf + - 9a9d639bd2ec tool_panel_section_label: QIIME 2 - name: qiime2__dada2__denoise_ccs owner: q2d2 revisions: - 9977f9d23166 + - a22807aaff34 - d777f76179b6 tool_panel_section_label: QIIME 2 - name: qiime2__dada2__denoise_paired @@ -79,10 +91,12 @@ tools: revisions: - 06bacd08bb47 - bbaba1707475 + - d2bf79e0bd52 tool_panel_section_label: QIIME 2 - name: qiime2__dada2__denoise_pyro owner: q2d2 revisions: + - 16c1fce384ab - 1fa5664f9157 - 377a0bd6edd4 tool_panel_section_label: QIIME 2 @@ -90,6 +104,7 @@ tools: owner: q2d2 revisions: - 3c8340e400df + - a2112f424054 - e7812ca89033 tool_panel_section_label: QIIME 2 - name: qiime2__deblur__denoise_16S @@ -101,6 +116,7 @@ tools: - name: qiime2__deblur__denoise_other owner: q2d2 revisions: + - 27ba31d2202b - 61ee71aacf1c - 86e36a2b44b0 tool_panel_section_label: QIIME 2 @@ -108,17 +124,20 @@ tools: owner: q2d2 revisions: - 0be892a57bfe + - e02092a0b2db - e62bac3eb4af tool_panel_section_label: QIIME 2 - name: qiime2__demux__emp_paired owner: q2d2 revisions: - 551e9187951c + - a9ce731fab29 - e6540fbc9b50 tool_panel_section_label: QIIME 2 - name: qiime2__demux__emp_single owner: q2d2 revisions: + - 19e2495b60e8 - 335abb486193 - 75b07a996ac0 tool_panel_section_label: QIIME 2 @@ -127,40 +146,47 @@ tools: revisions: - 0e5d4dc5c23e - 7573001162c8 + - b507d1f2196c tool_panel_section_label: QIIME 2 - name: qiime2__demux__subsample_paired owner: q2d2 revisions: - 522cc8ebcf4f + - 7b44ee1e60ea - f79287ee143e tool_panel_section_label: QIIME 2 - name: qiime2__demux__subsample_single owner: q2d2 revisions: - 12747289fc83 + - 26139ebc17ea - 6c2c8696456f tool_panel_section_label: QIIME 2 - name: qiime2__demux__summarize owner: q2d2 revisions: - 222b50c1cb52 + - acb0f8837379 - d8a9f74f1a6d tool_panel_section_label: QIIME 2 - name: qiime2__diversity__adonis owner: q2d2 revisions: - 28d5145fbbe3 + - 472a46b5d416 - 82f9bc0feff3 tool_panel_section_label: QIIME 2 - name: qiime2__diversity__alpha owner: q2d2 revisions: + - 5c2c4ceabe7e - 87b68b482c8e - 97e9b0b0aeae tool_panel_section_label: QIIME 2 - name: qiime2__diversity__alpha_correlation owner: q2d2 revisions: + - 339546317bfa - 5850f79a2b9f - 9235f6a16926 tool_panel_section_label: QIIME 2 @@ -169,10 +195,12 @@ tools: revisions: - 25b94f589fc8 - b7b5dc5a067b + - eae22172c84e tool_panel_section_label: QIIME 2 - name: qiime2__diversity__alpha_phylogenetic owner: q2d2 revisions: + - 6af85aa9f62d - b6e20cd4fd2c - fbf59d034371 tool_panel_section_label: QIIME 2 @@ -180,17 +208,20 @@ tools: owner: q2d2 revisions: - 97cb20f77d50 + - a19425489a68 - ed21beb2e60f tool_panel_section_label: QIIME 2 - name: qiime2__diversity__beta owner: q2d2 revisions: + - 7ed55f1323ee - eb36fbb83a9d - f5026cf3e156 tool_panel_section_label: QIIME 2 - name: qiime2__diversity__beta_correlation owner: q2d2 revisions: + - 26b99164f629 - 913fde2097a3 - ea97592533bb tool_panel_section_label: QIIME 2 @@ -198,17 +229,20 @@ tools: owner: q2d2 revisions: - 2df83b20af3f + - 35c850ccce45 - ae04ef51094f tool_panel_section_label: QIIME 2 - name: qiime2__diversity__beta_phylogenetic owner: q2d2 revisions: - 26534bb91445 + - 83d06804b15c - 9de0fa39f017 tool_panel_section_label: QIIME 2 - name: qiime2__diversity__beta_rarefaction owner: q2d2 revisions: + - 08aa9fb4ffc8 - 1ab2573cba43 - a5b96ea48d79 tool_panel_section_label: QIIME 2 @@ -217,10 +251,12 @@ tools: revisions: - 0f90022f70de - 0fb37e0413d6 + - 1e4f0944ae33 tool_panel_section_label: QIIME 2 - name: qiime2__diversity__core_metrics owner: q2d2 revisions: + - 2b7bcbf8bdf3 - 4b8cdacb02f5 - 9602903a0fbd tool_panel_section_label: QIIME 2 @@ -228,6 +264,7 @@ tools: owner: q2d2 revisions: - 9d29f6a334e5 + - d14296c8a1b8 - f4305c66e23d tool_panel_section_label: QIIME 2 - name: qiime2__diversity__filter_alpha_diversity @@ -240,29 +277,34 @@ tools: revisions: - 40dc453ee8fd - a53b321e6821 + - c6cab84f4198 tool_panel_section_label: QIIME 2 - name: qiime2__diversity__mantel owner: q2d2 revisions: - '196948449667' + - 9a97bf1e0e05 - f5f2c923cda4 tool_panel_section_label: QIIME 2 - name: qiime2__diversity__pcoa owner: q2d2 revisions: - 0b004354dcd2 + - 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