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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(class_balance,default)
S3method(class_balance,nestcv.train)
S3method(coef,cva.glmnet)
S3method(coef,nestcv.glmnet)
S3method(innercv_preds,nestcv.glmnet)
S3method(innercv_preds,nestcv.train)
S3method(lines,prc)
S3method(outercv,default)
S3method(outercv,formula)
S3method(plot,cva.glmnet)
S3method(plot,prc)
S3method(prc,data.frame)
S3method(prc,default)
S3method(prc,nestcv.SuperLearner)
S3method(prc,nestcv.glmnet)
S3method(prc,nestcv.train)
S3method(prc,outercv)
S3method(prc,repeatcv)
S3method(predict,cva.glmnet)
S3method(predict,hsstan)
S3method(predict,nestcv.SuperLearner)
S3method(predict,nestcv.glmnet)
S3method(predict,nestcv.train)
S3method(print,nestcv.glmnet)
S3method(print,predSummary)
S3method(print,predSummaryMulti)
S3method(print,repeatcv)
S3method(print,summary.repeatcv)
S3method(slim,cva.glmnet)
S3method(slim,default)
S3method(slim,nestcv.glmnet)
S3method(summary,nestcv.SuperLearner)
S3method(summary,nestcv.glmnet)
S3method(summary,nestcv.train)
S3method(summary,outercv)
S3method(summary,repeatcv)
S3method(var_stability,list)
S3method(var_stability,nestcv.glmnet)
S3method(var_stability,nestcv.train)
S3method(var_stability,repeatcv)
export(anova_filter)
export(barplot_var_stability)
export(bin_stat_filter)
export(boot_anova)
export(boot_correl)
export(boot_filter)
export(boot_lm)
export(boot_ttest)
export(boot_wilcoxon)
export(boruta_filter)
export(boxplot_expression)
export(class_balance)
export(class_stat_filter)
export(collinear)
export(combo_filter)
export(cor_stat_filter)
export(correl_filter)
export(correls2)
export(cv_coef)
export(cv_varImp)
export(cva.glmnet)
export(glmnet_coefs)
export(glmnet_filter)
export(hist_var_ranks)
export(innercv_preds)
export(innercv_roc)
export(innercv_summary)
export(lm_filter)
export(mcc)
export(mcc_multi)
export(metrics)
export(model.hsstan)
export(nestcv.SuperLearner)
export(nestcv.glmnet)
export(nestcv.train)
export(one_hot)
export(outercv)
export(plot_alphas)
export(plot_caret)
export(plot_lambdas)
export(plot_shap_bar)
export(plot_shap_beeswarm)
export(plot_varImp)
export(plot_var_ranks)
export(plot_var_stability)
export(pls_filter)
export(prc)
export(predSummary)
export(pred_SuperLearner)
export(pred_nestcv_glmnet)
export(pred_nestcv_glmnet_class1)
export(pred_nestcv_glmnet_class2)
export(pred_nestcv_glmnet_class3)
export(pred_train)
export(pred_train_class1)
export(pred_train_class2)
export(pred_train_class3)
export(randomsample)
export(ranger_filter)
export(relieff_filter)
export(repeatcv)
export(repeatfolds)
export(rf_filter)
export(slim)
export(smote)
export(stat_filter)
export(summary_vars)
export(supervisedPCA)
export(train_preds)
export(train_roc)
export(train_summary)
export(ttest_filter)
export(txtProgressBar2)
export(var_direction)
export(var_stability)
export(weight)
export(wilcoxon_filter)
importFrom(Rfast,ttests)
importFrom(caret,confusionMatrix)
importFrom(caret,createFolds)
importFrom(caret,defaultSummary)
importFrom(caret,mnLogLoss)
importFrom(caret,train)
importFrom(caret,trainControl)
importFrom(caret,varImp)
importFrom(data.table,as.data.table)
importFrom(data.table,rbindlist)
importFrom(doParallel,registerDoParallel)
importFrom(foreach,registerDoSEQ)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_col)
importFrom(ggplot2,geom_errorbarh)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,guide_colorbar)
importFrom(ggplot2,rel)
importFrom(ggplot2,scale_color_gradient2)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_distiller)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_fill_viridis_c)
importFrom(ggplot2,scale_radius)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,scale_y_discrete)
importFrom(ggplot2,stat_summary)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_classic)
importFrom(ggplot2,theme_minimal)
importFrom(ggplot2,xlab)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylab)
importFrom(glmnet,cv.glmnet)
importFrom(glmnet,glmnet)
importFrom(grDevices,hcl.colors)
importFrom(grDevices,rainbow)
importFrom(graphics,abline)
importFrom(graphics,arrows)
importFrom(graphics,boxplot)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(graphics,points)
importFrom(matrixStats,rowSds)
importFrom(matrixTests,col_oneway_welch)
importFrom(matrixTests,row_wilcoxon_twosample)
importFrom(methods,formalArgs)
importFrom(pROC,roc)
importFrom(parallel,clusterEvalQ)
importFrom(parallel,clusterExport)
importFrom(parallel,makeCluster)
importFrom(parallel,mclapply)
importFrom(parallel,parLapply)
importFrom(parallel,stopCluster)
importFrom(rlang,.data)
importFrom(stats,as.formula)
importFrom(stats,chisq.test)
importFrom(stats,coef)
importFrom(stats,complete.cases)
importFrom(stats,cor)
importFrom(stats,dist)
importFrom(stats,formula)
importFrom(stats,median)
importFrom(stats,model.frame)
importFrom(stats,model.response)
importFrom(stats,na.fail)
importFrom(stats,pf)
importFrom(stats,predict)
importFrom(stats,princomp)
importFrom(stats,pt)
importFrom(stats,reformulate)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(stats,terms)
importFrom(stats,var)
importFrom(utils,argsAnywhere)
importFrom(utils,capture.output)
importFrom(utils,flush.console)
importFrom(utils,methods)
importFrom(utils,setTxtProgressBar)
importFrom(utils,stack)
importFrom(utils,tail)
importFrom(utils,txtProgressBar)