Test taxonomy_krona_chart 2.7.1+galaxy0

[jennaj]

galaxyproject/usegalaxy-playbook#360

tool_id=toolshed.g2.bx.psu.edu/repos/crs4/taxonomy_krona_chart/taxonomy_krona_chart/2.7.1+galaxy0

[jennaj]

/run-tool-test tool_id=toolshed.g2.bx.psu.edu/repos/crs4/taxonomy_krona_chart/taxonomy_krona_chart/2.7.1+galaxy0

[mvdbeek]

Results (powered by Planemo)

Summary

State	Count
Total	3
Passed	3
Error	0
Failure	0
Skipped	0

Passed s

• ✅ toolshed.g2.bx.psu.edu/repos/crs4/taxonomy_krona_chart/taxonomy_krona_chart (Test tool test #1)

  Command Line:

  Exit Code:

  • 0

  Standard Output:

  • Importing /corral4/main/objects/e/e/2/dataset_ee295979-d76e-4bb8-9f0b-8c0f5e0f2382.dat...
    Writing /corral4/main/jobs/043/641/43641272/outputs/galaxy_dataset_29defae1-fb3a-4a02-9f46-e66af5e6c15a.dat...
    
    Importing /corral4/main/objects/e/e/2/dataset_ee295979-d76e-4bb8-9f0b-8c0f5e0f2382.dat...
    Writing /corral4/main/jobs/043/641/43641272/outputs/galaxy_dataset_29defae1-fb3a-4a02-9f46-e66af5e6c15a.dat...
    

  Job Parameters:

  • Job parameter	Parameter value
    type_of_data	{"__current_case__": 0, "input": {"values": [{"id": 98655773, "src": "hda"}]}, "max_rank": "18", "type_of_data_selector": "taxonomy"}
    root_name	"Root"
    combine_inputs	"false"
    chromInfo	"/cvmfs/data.galaxyproject.org/managed/len/ucsc/?.len"
    dbkey	"?"
    __input_ext	"taxonomy"

• ✅ toolshed.g2.bx.psu.edu/repos/crs4/taxonomy_krona_chart/taxonomy_krona_chart (Test test against test.galaxyproject.org #2)

  Command Line:

  Exit Code:

  • 0

  Standard Output:

  • Importing /corral4/main/objects/e/e/2/dataset_ee295979-d76e-4bb8-9f0b-8c0f5e0f2382.dat...
    Importing /corral4/main/objects/0/6/c/dataset_06cec197-d889-4324-a166-5666c4c5f818.dat...
    Writing /corral4/main/jobs/043/641/43641275/outputs/galaxy_dataset_fd18a99f-89ae-4985-bf81-89de74aaedfc.dat...
    
    Importing /corral4/main/objects/e/e/2/dataset_ee295979-d76e-4bb8-9f0b-8c0f5e0f2382.dat...
    Importing /corral4/main/objects/0/6/c/dataset_06cec197-d889-4324-a166-5666c4c5f818.dat...
    Writing /corral4/main/jobs/043/641/43641275/outputs/galaxy_dataset_fd18a99f-89ae-4985-bf81-89de74aaedfc.dat...
    

  Job Parameters:

  • Job parameter	Parameter value
    type_of_data	{"__current_case__": 0, "input": {"values": [{"id": 98655773, "src": "hda"}, {"id": 98655776, "src": "hda"}]}, "max_rank": "18", "type_of_data_selector": "taxonomy"}
    root_name	"Root"
    combine_inputs	"false"
    chromInfo	"/cvmfs/data.galaxyproject.org/managed/len/ucsc/?.len"
    dbkey	"?"
    __input_ext	"taxonomy"

• ✅ toolshed.g2.bx.psu.edu/repos/crs4/taxonomy_krona_chart/taxonomy_krona_chart (Test Test Prokka 1.14.6+galaxy1 #3)

  Command Line:

  Exit Code:

  • 0

  Standard Output:

  • Writing /corral4/main/jobs/043/641/43641274/outputs/galaxy_dataset_9977f2e1-896f-448d-92eb-8a20b660953c.dat...
    
    Writing /corral4/main/jobs/043/641/43641274/outputs/galaxy_dataset_9977f2e1-896f-448d-92eb-8a20b660953c.dat...
    

  Job Parameters:

  • Job parameter	Parameter value
    type_of_data	{"__current_case__": 1, "input": {"values": [{"id": 98655774, "src": "hda"}, {"id": 98655777, "src": "hda"}]}, "type_of_data_selector": "text"}
    root_name	"Root"
    combine_inputs	"false"
    chromInfo	"/cvmfs/data.galaxyproject.org/managed/len/ucsc/?.len"
    dbkey	"?"
    __input_ext	"tabular"