build.gradle

/*
 * This build file was generated by the Gradle 'init' task.
 *
 * This generated file contains a commented-out sample Java project to get you started.
 * For more details take a look at the Java Quickstart chapter in the Gradle
 * user guide available at https://docs.gradle.org/4.4.1/userguide/tutorial_java_projects.html
 */

// Apply the java plugin to add support for Java
plugins {
    id 'application'
    id 'java'
}

//mainClassName = 'exercises/Exercise06'
mainClassName = project.hasProperty("mainClass") ? getProperty("mainClass") : 'exercises.Exercise01'
description = 'My Application'

sourceCompatibility = 1.11
targetCompatibility = 1.11

repositories {
    jcenter()
    mavenCentral()
    maven {
      url "https://maven.scijava.org/content/groups/public"
    }
}


tasks.withType(JavaExec) {
    jvmArgs += '-ea'
}

test {
  // enable JUnit Platform (a.k.a. JUnit 5) support
  useJUnitPlatform()
}


dependencies {
    implementation 'net.imagej:ij:1.53c'

    implementation 'us.hebi.matlab.mat:mfl-core:0.5.6'
    implementation 'sc.fiji:imglib-clearvolume:1.4.2'
    //implementation 'net.clearvolume:clearvolume:1.4.2'
    //implementation 'net.clearcontrol:coremem:0.4.7'

//'org.jetbrains:annotations:16.0.2'

    implementation 'net.imagej:imagej:2.0.0-SNAPSHOT'
    implementation 'net.imagej:imagej-plugins-commands:0.8.1'
    // search https://maven.scijava.org/#nexus-search;quick~imglib2
    implementation 'org.scijava:scijava-common:2.83.0'
    implementation 'org.scijava:scijava-plugins-commands:0.2.0'
    implementation 'net.imglib2:imglib2:5.9.0'
    implementation 'net.imglib2:imglib2-ij:2.0.0-beta6'
    implementation 'net.imglib2:imglib2-algorithm:0.11.0'
    implementation 'net.imglib2:imglib2-algorithm-fft:0.2.0'
    //implementation 'net.imglib2:imglib2-ij:2.0.0-SNAPSHOT'
    //runtime 'org.scijava:script-editor:0.5.4'
    //implementation 'net.imglib2:imglib2-scripting:2.0.0-SNAPSHOT'
    //implementation 'net.imglib2:imglib2-script:0.2.4'
    //implementation  'org.scijava:script-editor:0.5.4'
    //implementation 'net.imagej:imagej-ui-swing:0.20.0'

    //implementation "net.imagej:ij1-patcher:1.0.1"
    implementation "net.imagej:imagej-legacy:0.36.0"
    implementation 'io.jhdf:jhdf:0.6.6'
    testImplementation("org.junit.jupiter:junit-jupiter-api:5.6.1")
    testRuntimeOnly("org.junit.jupiter:junit-jupiter-engine:5.6.1")

    //Ex2: parse JSON
    implementation 'org.json:json:20201115'

    //Ex3: progressbar
    implementation 'me.tongfei:progressbar:0.9.1'
}