multiqc_config.yaml

title: "GEMmaker Quality Report"

subtitle: "<a href='https://github.com/SystemsGenetics/GEMmaker'>GEMmaker</a> is a Nextflow workflow for large-scale gene expression sample processing, expression-level quantification and Gene Expression Matrix (GEM) construction."

intro_text: "Results from GEMmaker are useful for differential gene expression and gene co-expression network analyses. This report is the MultiQC summary of the GEMmaker workflow results."

custom_logo: './images/GEMmaker-logo-sm.png'

fn_ignore_dirs:
    - '.git'
    - 'work'
    - 'files'
    - 'images'
    - 'examples'
    - 'scripts'

fn_ignore_files:
    - 'main.nf'
    - 'multiqc_config.yaml'
    - 'multiqc_report.html'
    - 'nextflow.config'
    - 'README.md'
    - 'trace.txt'
    - '*.html'