odds and ends

dlpex566


errIs029
no coinjection, but chromo is ii

what if we were to set the post variable
$_POST['transgeneArray_htmlName'] to the id of the original element
we would need to know which array to use and which id
need to pass id
the class would know which element

problem for single elemnent since it won't know which element unless we subclass 
all the elements

alternative cheat is to use a switch statement
but we'd need to know when we are editing

doesItAlreadyExist(element_id, editedstate)
it must reassign a post variable and I don't know if that can be done

if editedstate is false, then just supply a button that goes to new screen for the selected element)
how does it know which element. the proper way is to subclass the sigle element item, but I don't want to have separate pages for each of them. 

single element has its own doesitexist



1) we could have data2blob in common functions
2) button would have saveas code, but obvious problem is next

how do we associate the text to the button
could we have a hidden field 
problem then is there may be 50 buttons on the screen; how do we map each button to each piece of text?

not so obvious

<button id="button-66" type="button" class="btn btn-info">download sequence data</button>
each plasmid will have a different id; it will use the id to retrieve the sequence data from the corresponding hidden variable

say we have plasmid with id 66

we have a hidden field with "sequence-66"

externally-sourced extra-chromosomal:
	1) the associated chromosomal is dimmed
	2) coinjection is available
	3) plasmids are available

externally-sourced integrated:
	1) the associated chromosomal is dimmed
	2) coinjection is dimmed
	3) plasmids is dimmed

lab-produced extra-chromosomal 
	1) the associated chromosomal is dimmed
	2) coinjection is available
	3) plasmids is available

lab-produced integrated
	1) the associated chromosomal is available
	2) coinjection is dimmed
	3) plasmids is dimmed

add a checkbox which itself is enabled only for lab-produced integrated. If it's checked, undim coinjection and plasmids. 

also, for the search, if there is an extra-choromsomal transgene, then dipslay its coinjection markers and plasmids


if it's integrated, the items are disabled. so we have another state if extra-choromsomal transgene selector has no selected item 

one idea have an N/A item for selectize or a button, I don't have an extra-chromosomal item


first question how can I have N/A item in transgene. 

Extra-chromosomal is unknown item.

1) lab-produced and integrated enable checkbox: is extra-chromsomal is not known
for all other instances, button is hidden

2) selecting it causes coinjection marker and plasmids to enable 

3) deselect it causes them to re disable

epvEx302 with coinjection 17 and plasmids 999 and 98 in wpc-111

strain epo454 has transgene kurIs38 which in turn has epvEx302 as an external transgene; log doesn't record this



F-003, E1-3; N-001, H4
j

The specified value does not conform to the required format, "yyyy-MM-dd".

we need a list of every frozen entry in the database 
we figure out the last entry, then looop through 

buildFrozenList buildNitrogenList

$theMaxFrozenNumber = 
$theMaxFrozenLetters = 

$this->returnCurrentFreezerNitrogenNumbers($theMaxFrozenNumber,$ theMaxFrozenLetters, $theMaxNitrogenNumber, $ theMaxNitrogenLetters);

$theMaxFullFreezerNumber = "F-" . sprintf("%03d", $ theMaxFrozenNumber) . ", " . $ theMaxFrozenLetters;

$theMaxFullNitrogenNumber = "N-" . sprintf("%03d", $ theMaxNitrogenNumber) . ", " . $ theMaxNitrogenLetters;

$theStrain->returnFreezerNitrogenArrays($theFreezerArray,$theNitrogenArray)

foreach ($theFreezerArray as $theFreezerEntry) {

}

foreach ($theNitrogenArray as $theNitrogenEntry) {

}

	
echo "<select id='freezerArrayID'name='freezerArrayName' placeholder='freezer location'>";

echo "<option value=''>'freezer location'</option>";

foreach($theArray as $row) {
	echo "<option value=\"$id\">$name</option>";
}

echo "</select>";

are there enough entries to accommodate all the possible strain
27 x 999 = 26,973 maximum number of strains should it accommodate more 

If I've calculated correctly, the database can specify up to 26,973 strain locations. Will that be enough?