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requirements.txt
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requirements.txt
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aiosignal==1.3.1
anndata==0.9.2
appdirs==1.4.4
attrs==23.1.0
click==8.1.7
cmake==3.27.4.1
colorama
comm
contourpy==1.1.0
cycler==0.11.0
debugpy
decorator
docker-pycreds==0.4.0
et-xmlfile==1.1.0
executing
filelock==3.12.4
fonttools==4.42.1
frozenlist==1.4.0
fsspec==2023.9.1
gitdb==4.0.10
GitPython==3.1.36
h5py==3.9.0
hnswlib==0.7.0
idna==3.4
igraph==0.10.8
importlib-metadata
importlib-resources==6.0.1
ipykernel
ipython
jedi
Jinja2==3.1.2
joblib==1.3.2
jsonschema==4.19.1
jsonschema-specifications==2023.7.1
jupyter_client
jupyter_core
kiwisolver==1.4.5
lit==16.0.6
littleutils==0.2.2
llvmlite==0.40.1
louvain==0.8.1
MarkupSafe==2.1.3
matplotlib==3.6.3
matplotlib-inline
mpmath==1.3.0
msgpack==1.0.5
natsort==8.4.0
nest-asyncio
networkx
numba==0.57.1
numpy
nvidia-cublas-cu11==11.10.3.66
nvidia-cuda-cupti-cu11==11.7.101
nvidia-cuda-nvrtc-cu11==11.7.99
nvidia-cuda-runtime-cu11==11.7.99
nvidia-cudnn-cu11==8.5.0.96
nvidia-cufft-cu11==10.9.0.58
nvidia-curand-cu11==10.2.10.91
nvidia-cusolver-cu11==11.4.0.1
nvidia-cusparse-cu11==11.7.4.91
nvidia-nccl-cu11==2.14.3
nvidia-nvtx-cu11==11.7.91
ogb==1.3.6
openpyxl==3.1.2
outdated==0.2.2
packaging
pandas==1.5.3
parso
paste-bio==1.4.0
pathtools==0.1.2
patsy==0.5.3
pexpect
pickleshare
Pillow==10.0.1
pkgutil_resolve_name==1.3.10
platformdirs
plotly==5.17.0
pooch
POT==0.9.1
prompt-toolkit
protobuf==4.24.3
psutil
ptyprocess
pure-eval
pyarrow==13.0.0
pycparser==2.21
Pygments
pynndescent==0.5.10
pyparsing==3.1.1
PySocks
python-dateutil
pytz==2023.3.post1
PyYAML==5.4.1
pyzmq
ray==2.7.0
referencing==0.30.2
requests
rpds-py==0.10.3
rpy2==3.5.14
scanpy==1.9.1
scikit-learn==1.3.0
scikit-misc==0.2.0
scipy
seaborn==0.12.2
sentry-sdk==1.31.0
session-info==1.0.0
setproctitle==1.3.2
six
smmap==5.0.0
stack-data
statsmodels==0.14.0
stdlib-list==0.9.0
sympy==1.12
tbb==2021.10.0
tenacity==8.2.3
tensorboardX==2.6.2.2
texttable==1.6.7
threadpoolctl==3.2.0
torch==2.0.1
tornado
tqdm
traitlets
triton==2.0.0
typing_extensions
tzdata==2023.3
tzlocal==5.0.1
umap-learn==0.5.4
urllib3
wandb==0.15.10
wcwidth
zipp