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restapidoc.json
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restapidoc.json
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{
"basePath": "Fill with basePath config",
"apis": [
{
"jsondocId": "a2ca84bf-cbab-4c0b-9ae0-d9c70ae13fa1",
"methods": [
{
"headers": [],
"pathparameters": [],
"queryparameters": [
{
"jsondocId": "02670b3d-ef77-4797-bc59-89a271b00f96",
"name": "username",
"format": "",
"description": "",
"type": "email",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "8bf4ca6a-4418-4e21-bd51-e9e33a245bf7",
"name": "password",
"format": "",
"description": "",
"type": "password",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "50fced28-00ac-4146-b8dd-5eec1225325e",
"name": "sequence",
"format": "",
"description": "(optional) Sequence name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "8245f62d-4d2d-440c-b9f7-39b6770011cd",
"name": "organism",
"format": "",
"description": "(optional) Organism ID or common name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "543d5338-ce44-4908-abbd-4bcde239a2b1",
"name": "features",
"format": "",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','name':'gene01'}",
"type": "JSONArray",
"required": "true",
"allowedvalues": []
}
],
"verb": "POST",
"description": "Set name of a feature",
"methodName": "setName",
"jsondocId": "3852f71b-83cb-4db9-99cc-0e71266f2b0b",
"bodyobject": {
"jsondocId": "f7b17cf2-6fb1-411a-a2e8-e8489e8ede04",
"mapValueObject": "",
"mapKeyObject": "",
"multiple": "Unknow",
"map": "",
"object": "annotation editor"
},
"apierrors": [],
"path": "/annotationEditor/setName",
"response": {
"jsondocId": "2eccbb30-4072-4a60-bc3c-aa6a6da7c048",
"mapValueObject": "",
"mapKeyObject": "",
"object": "annotation editor"
},
"produces": ["application/json"],
"consumes": ["application/json"]
},
{
"headers": [],
"pathparameters": [],
"queryparameters": [
{
"jsondocId": "dc82cd9d-0b75-433b-94c0-66ec7e2fc1f9",
"name": "username",
"format": "",
"description": "",
"type": "email",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "97514c26-5fa0-4018-9896-ef0f13e7215d",
"name": "password",
"format": "",
"description": "",
"type": "password",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "82a5f23d-64f6-47ce-9eec-34ad110ea6d1",
"name": "sequence",
"format": "",
"description": "(optional) Sequence name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "a640d2a4-0831-4f90-9c51-4b47d2e3eb7d",
"name": "organism",
"format": "",
"description": "(optional) Organism ID or common name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "1b7614be-83a4-4e29-8e9d-59448f6562d4",
"name": "features",
"format": "",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','status':'existing-status-string'}. Available status found here: /availableStatus/ ",
"type": "JSONArray",
"required": "true",
"allowedvalues": []
}
],
"verb": "POST",
"description": "Set status of a feature",
"methodName": "setStatus",
"jsondocId": "0d2bc859-94bc-41b4-872e-67ec74b3a768",
"bodyobject": {
"jsondocId": "3eeda8a2-9234-4892-8ba0-83c797fffe29",
"mapValueObject": "",
"mapKeyObject": "",
"multiple": "Unknow",
"map": "",
"object": "annotation editor"
},
"apierrors": [],
"path": "/annotationEditor/setStatus",
"response": {
"jsondocId": "cfdd25cf-d292-4e43-97da-33a22d3c772d",
"mapValueObject": "",
"mapKeyObject": "",
"object": "annotation editor"
},
"produces": ["application/json"],
"consumes": ["application/json"]
},
{
"headers": [],
"pathparameters": [],
"queryparameters": [
{
"jsondocId": "5f65e01d-99ff-472f-bf6f-153546614b52",
"name": "username",
"format": "",
"description": "",
"type": "email",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "6c82e16e-bbe7-4fd0-b403-fc156655554d",
"name": "password",
"format": "",
"description": "",
"type": "password",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "537030db-9aa6-4fee-b871-93d05e253671",
"name": "sequence",
"format": "",
"description": "(optional) Sequence name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "89f62a93-22d4-4c17-b8ff-94222cb93aa5",
"name": "organism",
"format": "",
"description": "(optional) Organism ID or common name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "4952e97d-f874-408d-8b9d-665f4855db21",
"name": "features",
"format": "",
"description": "JSONArray of JSON feature objects ('uniquename' required) JSONArray described by https://github.com/GMOD/Apollo/blob/master/grails-app/domain/org/bbop/apollo/Feature.groovy",
"type": "JSONArray",
"required": "true",
"allowedvalues": []
}
],
"verb": "POST",
"description": "Get comments",
"methodName": "getComments",
"jsondocId": "4bb0ef9c-9612-4bd1-970c-c1c05032b795",
"bodyobject": {
"jsondocId": "2a7456b3-9f0d-48de-a266-7c28f3ef5aaa",
"mapValueObject": "",
"mapKeyObject": "",
"multiple": "Unknow",
"map": "",
"object": "annotation editor"
},
"apierrors": [],
"path": "/annotationEditor/getComments",
"response": {
"jsondocId": "c7d9f67c-7854-4d01-b669-4f961fb449a6",
"mapValueObject": "",
"mapKeyObject": "",
"object": "annotation editor"
},
"produces": ["application/json"],
"consumes": ["application/json"]
},
{
"headers": [],
"pathparameters": [],
"queryparameters": [
{
"jsondocId": "106827a8-a08b-4613-882d-250d42a82e48",
"name": "username",
"format": "",
"description": "",
"type": "email",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "7d50f769-e195-4b90-a403-bce02a26d530",
"name": "password",
"format": "",
"description": "",
"type": "password",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "16903b70-9fd6-457a-a9cc-37ac406ca357",
"name": "sequence",
"format": "",
"description": "(optional) Sequence name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "664b382f-9819-42a1-9f30-71239ce2ab69",
"name": "organism",
"format": "",
"description": "(optional) Organism ID or common name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "59a4bd34-1be3-4527-9b3a-3ca69f39827a",
"name": "features",
"format": "",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','non_reserved_properties':[{'tag':'clockwork','value':'orange'},{'tag':'color','value':'purple'}]}. Available status found here: /availableStatus/ ",
"type": "JSONArray",
"required": "true",
"allowedvalues": []
}
],
"verb": "POST",
"description": "Add attribute (key,value pair) to feature",
"methodName": "addAttribute",
"jsondocId": "a3aa668b-d8f8-4d54-9cf6-e740725e31bb",
"bodyobject": {
"jsondocId": "850913b9-5ece-4bc1-a08d-1efe888de19e",
"mapValueObject": "",
"mapKeyObject": "",
"multiple": "Unknow",
"map": "",
"object": "annotation editor"
},
"apierrors": [],
"path": "/annotationEditor/addAttribute",
"response": {
"jsondocId": "33831164-2563-4db7-9698-ee1ceaee9282",
"mapValueObject": "",
"mapKeyObject": "",
"object": "annotation editor"
},
"produces": ["application/json"],
"consumes": ["application/json"]
},
{
"headers": [],
"pathparameters": [],
"queryparameters": [
{
"jsondocId": "18bab019-667e-42db-a0db-467c0be320fa",
"name": "username",
"format": "",
"description": "",
"type": "email",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "83deac9b-cc8a-4adb-bece-11d464fad38f",
"name": "password",
"format": "",
"description": "",
"type": "password",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "831d6310-0a6e-4d8f-b744-8d916df1b180",
"name": "sequence",
"format": "",
"description": "(optional) Sequence name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "dff28f3a-06ce-47dd-9063-13c67db8027c",
"name": "organism",
"format": "",
"description": "(optional) Organism ID or common name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "9e019a38-c8e8-4082-b770-970a4d62b21f",
"name": "features",
"format": "",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','description':'some descriptive test'}",
"type": "JSONArray",
"required": "true",
"allowedvalues": []
}
],
"verb": "POST",
"description": "Set description for a feature",
"methodName": "setDescription",
"jsondocId": "17f72d5f-e8f9-4425-ad94-1455c9c003e2",
"bodyobject": {
"jsondocId": "f3b61e64-8653-41fa-a593-fa548c01a921",
"mapValueObject": "",
"mapKeyObject": "",
"multiple": "Unknow",
"map": "",
"object": "annotation editor"
},
"apierrors": [],
"path": "/annotationEditor/setDescription",
"response": {
"jsondocId": "f51f73a7-653f-420f-8db4-71c844ca2b7c",
"mapValueObject": "",
"mapKeyObject": "",
"object": "annotation editor"
},
"produces": ["application/json"],
"consumes": ["application/json"]
},
{
"headers": [],
"pathparameters": [],
"queryparameters": [],
"verb": "POST",
"description": "Returns a translation table as JSON",
"methodName": "getTranslationTable",
"jsondocId": "9860160d-e979-4318-a8e1-00be63966327",
"bodyobject": {
"jsondocId": "8f5fe3ae-2ae6-4c9f-8203-4ac14ca75c3a",
"mapValueObject": "",
"mapKeyObject": "",
"multiple": "Unknow",
"map": "",
"object": "annotation editor"
},
"apierrors": [],
"path": "/annotationEditor/getTranslationTable",
"response": {
"jsondocId": "bf853398-56c4-4521-8cae-a18f49523ff9",
"mapValueObject": "",
"mapKeyObject": "",
"object": "annotation editor"
},
"produces": ["application/json"],
"consumes": ["application/json"]
},
{
"headers": [],
"pathparameters": [],
"queryparameters": [
{
"jsondocId": "ce7ba39a-9043-4b8c-b345-c3b75e759b2e",
"name": "username",
"format": "",
"description": "",
"type": "email",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "320fe996-8ac6-4c1a-9c7f-c3555df5c632",
"name": "password",
"format": "",
"description": "",
"type": "password",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "6d896137-9667-40b1-87b0-d5fd87ab3824",
"name": "organism",
"format": "",
"description": "(optional) Organism ID or common name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "90ea0902-0c99-40fa-b001-cb5affd0af15",
"name": "sequence",
"format": "",
"description": "(optional) Sequence name",
"type": "string",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "0b393169-b74f-4a71-8846-a0fa6ebc8ef1",
"name": "suppressHistory",
"format": "",
"description": "Suppress the history of this operation",
"type": "boolean",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "d806a704-b0dd-4f08-adbe-8a63d1459cd0",
"name": "suppressEvents",
"format": "",
"description": "Suppress instant update of the user interface",
"type": "boolean",
"required": "true",
"allowedvalues": []
},
{
"jsondocId": "a3d44bd8-e0b4-4628-9910-8ebb60e18cca",
"name": "features",
"format": "",
"description": "JSONArray of JSON feature objects described by https://github.com/GMOD/Apollo/blob/master/grails-app/domain/org/bbop/apollo/Feature.groovy",
"type": "JSONArray",
"required": "true",
"allowedvalues": []
}
],
"verb": "POST",
"description": "Add non-coding genomic feature",
"methodName": "addFeature",
"jsondocId": "6b91e8e1-83a4-48b1-b84f-300a91f588d1",
"bodyobject": {
"jsondocId": "09c0e759-ecc0-4214-8efc-95a7c8458ca6",
"mapValueObject": "",
"mapKeyObject": "",
"multiple": "Unknow",
"map": "",
"object": "annotation editor"
},
"apierrors": [],
"path": "/annotationEditor/addFeature",
"response": {
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