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DESCRIPTION
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DESCRIPTION
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Type: Package
Package: ROSeq
Title: Modeling expression ranks for noise-tolerant differential expression
analysis of scRNA-Seq data
Version: 1.3.10
Authors@R: c(person("Krishan", "Gupta",
email = "[email protected]", role = c("aut","cre")),
person("Manan", "Lalit",
email = "[email protected]", role = c("aut")),
person("Aditya", "Biswas",
email = "[email protected]", role = c("aut")),
person("Abhik", "Ghosh",
email = "[email protected]", role = c("aut")),
person("Debarka", "Sengupta",
email = "[email protected]", role = c("aut")))
Description: ROSeq - A rank based approach to modeling gene expression
with filtered and normalized read count matrix. ROSeq takes
filtered and normalized read matrix and cell-annotation/condition
as input and determines the differentially expressed genes between
the contrasting groups of single cells. One of the input parameters
is the number of cores to be used.
URL: https://github.com/krishan57gupta/ROSeq
BugReports: https://github.com/krishan57gupta/ROSeq/issues
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Depends: R (>= 4.0)
biocViews:
GeneExpression,
DifferentialExpression,
SingleCell
Imports:
pbmcapply,
edgeR,
limma
Suggests:
knitr,
rmarkdown,
testthat,
RUnit,
BiocGenerics
VignetteBuilder:
knitr