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The purpose of this repository is to be able to recursively inspect the csv files in a data directory. Additionally it is capable of recursively extracting any compressed files and folders in the directories and subdirectories of a data directory.
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The ADNI data used to test this script was downloaded in December 2019
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It was downloaded at http://adni.loni.usc.edu/
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Command for recusrisvely extracting all compressed files and directories in your data directory:
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python3 main.py extract --data-path /path/to/data/directory
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Currently can extract the following file extensions: .tgz, .tar, .gz, .tar.gz, and .zip
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Command for inspecting:
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python3 main.py inspect --data-path /path/to/data/directory --key-words keyword1 keyword2 ...
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Use the --verbose option to print statistical information about the columns in the CSVs in addition to the column names