From 5a7fa36d52505c7c0859c66a1ffaf2bcd07391d3 Mon Sep 17 00:00:00 2001
From: Stefan Janssen <stefan.m.janssen@gmail.com>
Date: Wed, 14 Apr 2021 13:37:30 +0200
Subject: [PATCH] updating truth after fixing parameter bug in ViennaRNA

---
 Truth/Regress/adpf.mfepp.mfe1.t2004.out        | 4 ++--
 Truth/Regress/adpf.mfepp.mfe2.t2004.out        | 2 +-
 Truth/Regress/adpf.mfepp.temp50.mfe1.t2004.out | 4 ++--
 Truth/Regress/adpfiupac.mfepp.iupac.out        | 2 +-
 4 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/Truth/Regress/adpf.mfepp.mfe1.t2004.out b/Truth/Regress/adpf.mfepp.mfe1.t2004.out
index 2a14d873..75b76016 100644
--- a/Truth/Regress/adpf.mfepp.mfe1.t2004.out
+++ b/Truth/Regress/adpf.mfepp.mfe1.t2004.out
@@ -1,4 +1,4 @@
 Answer: 
-( -2300 , .....(((((((...((((......))..))......))))).)).....((((((((....(((((.....((((((.....))))))..))))))).)))))) )
-( -2300 , .....(((((((...((((......))..))......))))).)).....((((((((....(((((.....((((((.....))))))..)))))))).))))) )
+( -2360 , (((((((((....))).)).))))............(((....)))....((((((((....(((((.....((((((.....))))))..))))))).)))))) )
+( -2360 , (((((((((....))).)).))))............(((....)))....((((((((....(((((.....((((((.....))))))..)))))))).))))) )
 
diff --git a/Truth/Regress/adpf.mfepp.mfe2.t2004.out b/Truth/Regress/adpf.mfepp.mfe2.t2004.out
index a3ac37a3..2d67bdaa 100644
--- a/Truth/Regress/adpf.mfepp.mfe2.t2004.out
+++ b/Truth/Regress/adpf.mfepp.mfe2.t2004.out
@@ -1,3 +1,3 @@
 Answer: 
-( -80 , ...........(((((...))))) )
+( -100 , ............((((...)))). )
 
diff --git a/Truth/Regress/adpf.mfepp.temp50.mfe1.t2004.out b/Truth/Regress/adpf.mfepp.temp50.mfe1.t2004.out
index acd11f42..ff6c41ca 100644
--- a/Truth/Regress/adpf.mfepp.temp50.mfe1.t2004.out
+++ b/Truth/Regress/adpf.mfepp.temp50.mfe1.t2004.out
@@ -1,4 +1,4 @@
 Answer: 
-( -1398 , .....(((((((...((((......))..))......))))).)).....((((((((....(((((.....((((((.....))))))..))))))).)))))) )
-( -1398 , .....(((((((...((((......))..))......))))).)).....((((((((....(((((.....((((((.....))))))..)))))))).))))) )
+( -1474 , .((((((((....))).)).))).............(((....)))....((((((((....(((((.....((((((.....))))))..))))))).)))))) )
+( -1474 , .((((((((....))).)).))).............(((....)))....((((((((....(((((.....((((((.....))))))..)))))))).))))) )
 
diff --git a/Truth/Regress/adpfiupac.mfepp.iupac.out b/Truth/Regress/adpfiupac.mfepp.iupac.out
index 4a56b697..ee4d6e1c 100644
--- a/Truth/Regress/adpfiupac.mfepp.iupac.out
+++ b/Truth/Regress/adpfiupac.mfepp.iupac.out
@@ -1,3 +1,3 @@
 Answer: 
-( -380 , .(((((...)))))............ )
+( -350 , .(((((...)))))............ )