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chembl.yaml
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chembl.yaml
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Name: ChEMBL - Data Lakehouse Ready
Description: ChEMBL is a manually curated database of bioactive molecules with drug-like properties. It brings together chemical, bioactivity and genomic data to aid the translation of genomic information into effective new drugs. This representation of ChEMBL is stored in Parquet format and most easily utilized through Amazon Athena. Follow the documentation for install instructions (< 2 minute install). New ChEMBL releases occur sporadically; the most up to date information on ChEMBL releases can be found [here](https://chembl.gitbook.io/chembl-interface-documentation/downloads).
Documentation: https://github.com/aws-samples/data-lake-as-code/blob/roda/docs/roda_install.md
Contact: https://github.com/aws-samples/data-lake-as-code/issues
ManagedBy: "[Amazon Web Services](https://aws.amazon.com/)"
UpdateFrequency: Upon request. We try to keep it updated to every odd version.
Tags:
- chemistry
- genomic
- molecule
- life sciences
- biotech blueprint
- parquet
License: https://github.com/aws-samples/data-lake-as-code/blob/roda/docs/roda_attributions.txt
Resources:
- Description: ChEMBL 29
ARN: arn:aws:s3:::aws-roda-hcls-datalake/chembl_29/
Region: us-east-1
Type: S3 Bucket
- Description: ChEMBL 27
ARN: arn:aws:s3:::aws-roda-hcls-datalake/chembl_27/
Region: us-east-1
Type: S3 Bucket
- Description: ChEMBL 25
ARN: arn:aws:s3:::aws-roda-hcls-datalake/chembl_25/
Region: us-east-1
Type: S3 Bucket
DataAtWork:
Tutorials:
- Title: Data Lake as Code Deployment Guide
URL: https://github.com/aws-samples/data-lake-as-code/blob/roda/docs/roda_install.md
AuthorName: AWS Biotech Blueprints Team
Services:
- Athena
- Glue
- Lake Formation
Publications:
- Title: Data Lake as Code, Featuring ChEMBL and Open Targets
URL: https://aws.amazon.com/blogs/startups/a-data-lake-as-code-featuring-chembl-and-opentargets/
AuthorName: Paul Underwood