docker-compose.yml

# Open PHACTS platform
# Docker Compose configuration
# https://docs.docker.com/compose/yml/
#
# Each entry below defines a docker container,
# some of which expose ports, e.g. this exposes
# the internal port 80 as port 3002 to the world:
#
# ports:
#   - "3002:80"
#
# To change the exposed port, change the number on the left
#
# Data is stored in Docker volumes, which by default would be
# managed by Docker, e.g. created within /var/lib/docker
# with a UUID.
#
# To use a different folder/partition, e.g. for backup purposes,
# speed or disk requirements, modify "volumes:" for the
# *data containers further down.
#

## NOTE: Be careful about indentation!

version: '2'
services:
  explorer:
    container_name: ops-explorer
    image: openphacts/explorer2
    ports:
      - "3001:3000"
    links:
      - api
    environment:
      # CHANGE: "localhost" to fully qualified hostname
      # Do NOT include a trailing /
      - API_URL=http://localhost:3002
    #restart: always
  
  api:
    container_name: ops-api
    image: openphacts/ops-linkeddataapi
    ports:
      # Remember to match port in API_URL below
      - "3002:80"
    links:
      - ims
      - memcached
      - virtuoso:sparql
    #environment:
    #  - CRS=https://ops.rsc.org/api/v1/
    #  - CONCEPTWIKI=http://www.conceptwiki.org/web-ws/concept
    #restart: always
  
  # SPARQL server
  virtuoso:
    container_name: ops-virtuoso
    #image: stain/virtuoso
    build: virtuoso-ops
    ports:
      - "3003:8890"
    volumes_from:
      - virtuosodata
    #restart: always
  
  virtuosodata:
    container_name: ops-virtuosodata
    image: busybox
    volumes:
      # To specify alternative data folder, use instad:
      # - /media/big-SSD/virtuoso:/virtuoso
      - /virtuoso
    container_name: ops-virtuosodata
  
  mysqldata:
    container_name: ops-mysqldata
    image: busybox
    volumes:
      # To specify alternative data folder, use instead:
      # - /media/big-SSD/mysql:/var/lib/mysql
      - /var/lib/mysql
  
  
  mysql:
    container_name: ops-mysql
    image: mysql:5.6
    volumes_from:
      - mysqldata
    environment:
      - MYSQL_ROOT_PASSWORD=uCie0ahgah
      - MYSQL_DATABASE=ims
      - MYSQL_USER=ims
      - MYSQL_PASSWORD=ims
    #restart: always
  
  ims:
    container_name: ops-ims
    image: openphacts/identitymappingservice
    ports:
      - "3004:8080"
    links:
      - mysql
    #restart: always
  
  memcached:
    container_name: ops-memcached
    image: memcached
    #restart: always
  
  
  mysqlstaging:
    container_name: ops-mysqlstaging
    #build: mysqlstaging
    image: openphacts/identitymappingservice-staging
    links:
      - mysql
  #
  # Populate RDF from virtuoso backup download
  virtuosostaging:
    container_name: ops-virtuosostaging
    build: virtuosodata-frombackup
    volumes_from:
      - virtuosodata
  #
  # To customize RDF dataloading, comment OUT the above 'virtuosostaging' block,
  # uncomment the below block, and then run
  # docker-compose up -d virtuosostagingrdf
  #
  ## BEGIN custom loading
  
  ### Download from data.openphacts.org
  #openphactsrdf:
  #  container_name: ops-openphactsrdf
  #  build: openphacts-rdf
  #  volumes:
  #    # To specify alternative data folder, use instad:
  #    # - /media/big-SSD/download:/download
  #    # - /media/big-SSD/staging:/staging
  #    - /download
  #    - /staging
  #    # /download
  #
  ### Load into virtuoso
  #virtuosostagingrdf:
  #  container_name: ops-virtuosostagingrdf
  #  build: virtuosodata-fromrdf
  #  volumes_from:
  #    - virtuosodata
  #    - openphactsrdf
  
  ### END custom loading
  
  
  
  ## Future services
  
  #elasticsearch:
  #  container_name: ops-elasticsearch
  #  image: elasticsearch
  ##  TODO: Data loading
  #ops-search:
  # container_name: ops-search
  # image: openphacts/ops-search