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_quarto.yml
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_quarto.yml
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---
project:
type: website
preview:
port: 4200
browser: true
watch-inputs: true
navigate: true
timeout: 300
license: "Copyright 2023, Hoffmann-La Roche Ltd."
format:
html:
search: true
theme:
light:
- flatly
dark:
- darkly
anchor-sections: true
smooth-scroll: true
code-link: true
code-fold: true
code-overflow: scroll
code-line-numbers: true
code-copy: true
code-tools:
source: true
toggle: false
caption: none
code-block-bg: true
code-block-border-left: "#1482FA"
css: assets/css/style.scss
number-sections: false
lang: en-US
page-layout: full
execute:
freeze: auto
cache: true
code-line-numbers: true
knitr:
opts_chunk:
echo: true
fig.width: 15
editor: visual
highlight-style: github
website:
image: assets/images/logo.png
favicon: assets/images/logo.png
open-graph: true
search:
location: navbar
type: overlay
copy-button: true
page-navigation: true
reader-mode: true
site-url: https://insightsengineering.github.io/biomarker-catalog
repo-url: https://github.com/insightsengineering/biomarker-catalog
issue-url: https://github.com/insightsengineering/biomarker-catalog/issues/new/choose
repo-actions: [edit, issue]
repo-branch: main
google-analytics: UA-125641273-1
cookie-consent: true
page-footer:
left: |
Made with ❤️ by the Statistical Engineering Team
[{fig-alt="StatisticalEngineering" width=15px}](https://github.com/insightsengineering)
center:
- text: "License"
href: misc/license.qmd
right:
- icon: github
href: https://github.com/insightsengineering/biomarker-catalog
aria-label: BAC GitHub
- icon: rss
href: https://insightsengineering.github.io/biomarker-catalog/index.xml
aria-label: BAC RSS
navbar:
pinned: true
collapse: false
background: primary
search: true
tools:
- icon: slack
href: https://app.slack.com/client/T028PB489D3/
aria-label: Slack
text: Pharmaverse Slack
- icon: github
href: https://github.com/insightsengineering/biomarker-catalog
aria-label: Repository
text: BAC GitHub
- icon: rss
href: https://insightsengineering.github.io/biomarker-catalog/index.xml
aria-label: RSS
text: BAC RSS
sidebar:
- id: sidebar
style: docked
collapse-level: 1
logo: assets/images/logo.png
border: true
contents:
- text: Index
file: index.qmd
- text: "---"
# If the content needs to be auto-organized
# consider uncommenting this line and removing
# the lines in this tree below
#- auto: tables
- file: tables/index.qmd
text: Tables
contents:
- file: tables/cpmt01.qmd
text: CPMT
contents:
- file: tables/cpmt01.qmd
text: CPMT1
- file: tables/CPMT2/cpmt02.qmd
text: CPMT2
contents:
- file: tables/CPMT2/cpmt02a.qmd
text: CPMT2A
- file: tables/cpmt03.qmd
text: CPMT3
- file: tables/DT1/dt01.qmd
text: DT
contents:
- file: tables/DT1/dt01.qmd
text: DT1
contents:
- file: tables/DT1/dt01a.qmd
text: DT1A
- file: tables/DT1/dt01b.qmd
text: DT1B
- file: tables/DT1/dt01c.qmd
text: DT1C
- file: tables/DT2/dt02.qmd
text: DT2
contents:
- file: tables/DT2/dt02a.qmd
text: DT2A
- file: tables/TET1/tet01.qmd
text: TET
contents:
- file: tables/TET1/tet01.qmd
text: TET1
contents:
- file: tables/TET1/tet01a.qmd
text: TET1A
- text: "---"
# If the content needs to be auto-organized
# consider uncommenting this line and removing
# the lines in this tree below
#- auto: graphs
- file: graphs/index.qmd
text: Graphs
contents:
- file: graphs/ag01.qmd
text: AG
contents:
- file: graphs/ag01.qmd
text: AG1
- file: graphs/DG1/dg01.qmd
text: DG
contents:
- file: graphs/DG1/dg01.qmd
text: DG1
contents:
- file: graphs/DG1/dg01a.qmd
text: DG1A
- file: graphs/DG1/dg01b.qmd
text: DG1B
- file: graphs/dg02.qmd
text: DG2
- file: graphs/DG3/dg03.qmd
text: DG3
contents:
- file: graphs/DG3/dg03a.qmd
text: DG3A
- file: graphs/dg04.qmd
text: DG4
- file: graphs/KG1/kg01.qmd
text: KG
contents:
- file: graphs/KG1/kg01.qmd
text: KG1
contents:
- file: graphs/KG1/kg01a.qmd
text: KG1A
- file: graphs/KG1/kg01b.qmd
text: KG1B
- file: graphs/KG2/kg02.qmd
text: KG2
contents:
- file: graphs/KG2/kg02a.qmd
text: KG2A
- file: graphs/kg03.qmd
text: KG3
- file: graphs/KG4/kg04.qmd
text: KG4
contents:
- file: graphs/KG4/kg04a.qmd
text: KG4A
- file: graphs/KG4/kg04b.qmd
text: KG4B
- file: graphs/KG5/kg05.qmd
text: KG5
contents:
- file: graphs/KG5/kg05a.qmd
text: KG5A
- file: graphs/KG5/kg05b.qmd
text: KG5B
- file: graphs/RFG1/rfg01.qmd
text: RFG
contents:
- file: graphs/RFG1/rfg01.qmd
text: RFG1
contents:
- file: graphs/RFG1/rfg01a.qmd
text: RFG1A
- file: graphs/RFG2/rfg02a.qmd
text: RFG2
contents:
- file: graphs/RFG2/rfg02a.qmd
text: RFG2A
- file: graphs/RFG2/rfg02b.qmd
text: RFG2B
- file: graphs/RFG2/rfg02c.qmd
text: RFG2C
- file: graphs/rfg03.qmd
text: RFG3
- file: graphs/RG1/rg01.qmd
text: RG
contents:
- file: graphs/RG1/rg01.qmd
text: RG1
contents:
- file: graphs/RG1/rg01a.qmd
text: RG1A
- file: graphs/RG1/rg01b.qmd
text: RG1B
- file: graphs/RG1/rg01c.qmd
text: RG1C
- file: graphs/RG2/rg02.qmd
text: RG2
contents:
- file: graphs/RG2/rg02a.qmd
text: RG2A
- file: graphs/RG3/rg03.qmd
text: RG3
contents:
- file: graphs/RG3/rg03a.qmd
text: RG3A
- file: graphs/RG3/rg03b.qmd
text: RG3B
- file: graphs/spg01.qmd
text: SPG
contents:
- file: graphs/spg01.qmd
text: SPG1
- file: graphs/spg02.qmd
text: SPG2
- file: graphs/rnag01.qmd
text: RNAG
contents:
- file: graphs/rnag01.qmd
text: RNAG1
- file: graphs/rnag02.qmd
text: RNAG2
- file: graphs/rnag03.qmd
text: RNAG3
- file: graphs/rnag04.qmd
text: RNAG4
- file: graphs/rnag05.qmd
text: RNAG5
- file: graphs/rnag06.qmd
text: RNAG6
- file: graphs/rnag07.qmd
text: RNAG7
- file: graphs/rnag08.qmd
text: RNAG8
- file: graphs/rnag09.qmd
text: RNAG9
- file: graphs/rnag10.qmd
text: RNAG10
- file: graphs/SFG1/sfg01.qmd
text: SFG
contents:
- file: graphs/SFG1/sfg01.qmd
text: SFG1
contents:
- file: graphs/SFG1/sfg01a.qmd
text: SFG1A
- file: graphs/SFG1/sfg01b.qmd
text: SFG1B
- file: graphs/SFG2/sfg02.qmd
text: SFG2
contents:
- file: graphs/SFG2/sfg02a.qmd
text: SFG2A
- file: graphs/SFG2/sfg02b.qmd
text: SFG2B
- file: graphs/SFG2/sfg02c.qmd
text: SFG2C
- file: graphs/SFG2/sfg02d.qmd
text: SFG2D
- file: graphs/SFG3/sfg03.qmd
text: SFG3
contents:
- file: graphs/SFG3/sfg03a.qmd
text: SFG3A
- file: graphs/sfg04.qmd
text: SFG4
- file: graphs/SFG5/sfg05.qmd
text: SFG5
contents:
- file: graphs/SFG5/sfg05a.qmd
text: SFG5A
- file: graphs/SFG5/sfg05b.qmd
text: SFG5B
- file: graphs/SFG5/sfg05c.qmd
text: SFG5C
- file: graphs/SFG6/sfg06a.qmd
text: SFG6
contents:
- file: graphs/SFG6/sfg06a.qmd
text: SFG6A
- file: graphs/SFG6/sfg06b.qmd
text: SFG6B
- file: graphs/SFG6/sfg06c.qmd
text: SFG6C
comments:
giscus:
# Reference: https://quarto.org/docs/reference/projects/books.html#giscus
# Also https://giscus.app/ for all options
repo: insightsengineering/biomarker-catalog
repo-id: "R_kgDOJMeENQ"
category: General
category-id: "DIC_kwDOJMeENc4CVB9s"
reactions-enabled: true
theme: light
language: en
loading: lazy
mapping: pathname