Compression feature #437
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: h5bench (HDF5 1.12.0) | |
| on: | |
| pull_request: | |
| workflow_dispatch: | |
| push: | |
| branches: | |
| - master | |
| jobs: | |
| h5bench: | |
| runs-on: ubuntu-20.04 | |
| container: | |
| image: hpcio/hdf5-1.12.0 | |
| timeout-minutes: 60 | |
| env: | |
| OMPI_ALLOW_RUN_AS_ROOT: 1 | |
| OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: Configuration | |
| run: | | |
| git config --global user.email "[email protected]" | |
| git config --global user.name "Github CI" | |
| - name: Build h5bench | |
| run: | | |
| export HDF5_HOME=/opt/hdf5 | |
| mkdir build | |
| cd build | |
| cmake .. \ | |
| -DH5BENCH_ALL=ON | |
| make -j 2 | |
| make install | |
| ldconfig | |
| - name: Test h5bench SYNC write/read | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-contig-1d-small.json | |
| - name: Test h5bench SYNC write 1D contiguous (memory) strided (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-strided.json | |
| - name: Test h5bench SYNC write 1D contiguous (memory) contiguous (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig.json | |
| - name: Test h5bench SYNC write 1D contiguous (memory) interleaved (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-interleaved.json | |
| - name: Test h5bench SYNC write 1D interleaved (memory) contiguous (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-interleaved-contig.json | |
| - name: Test h5bench SYNC write 1D interleaved (memory) interleaved (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-interleaved-interleaved.json | |
| - name: Test h5bench SYNC write 2D contiguous (memory) contiguous (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig.json | |
| - name: Test h5bench SYNC write 2D contiguous (memory) interleaved (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-interleaved.json | |
| - name: Test h5bench SYNC write 2D interleaved (memory) contiguous (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-interleaved-contig.json | |
| - name: Test h5bench SYNC write 2D interleaved (memory) interleaved (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-interleaved-interleaved.json | |
| - name: Test h5bench SYNC write 3D contiguous (memory) contiguous (file) | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-3d-contig-contig.json | |
| - name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) full | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-full.json | |
| - name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) partial | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-partial.json | |
| - name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) strided | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-strided.json | |
| - name: Test h5bench SYNC read 2D contiguous (memory) contiguous (file) full | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json | |
| - name: Test h5bench SYNC read 3D contiguous (memory) contiguous (file) full | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json | |
| - name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) full | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-full.json | |
| - name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) partial | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-partial.json | |
| - name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) strided | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-strided.json | |
| - name: Test h5bench SYNC read 2D contiguous (memory) contiguous (file) full | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json | |
| - name: Test h5bench SYNC read 3D contiguous (memory) contiguous (file) full | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json | |
| - name: Test h5bench SYNC write unlimited | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-write-unlimited.json | |
| - name: Test h5bench SYNC overwrite | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-overwrite.json | |
| - name: Test h5bench SYNC append | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-append.json | |
| - name: Test h5bench SYNC exerciser | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-exerciser.json | |
| - name: Test h5bench SYNC metadata | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-metadata.json | |
| - name: Test h5bench SYNC amrex | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-amrex.json | |
| - name: Test h5bench SYNC openpmd | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-openpmd.json | |
| - name: Test h5bench SYNC e3sm | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-e3sm.json | |
| - name: Test h5bench SYNC macsio | |
| run: | | |
| export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH | |
| cd build | |
| ./h5bench --debug --abort-on-failure ../samples/sync-macsio.json | |
| - name: Setup tmate session | |
| if: ${{ failure() }} | |
| uses: mxschmitt/action-tmate@v3 | |
| - name: Upload artifact | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test | |
| path: build/storage/**/std* | |
| retention-days: 5 |