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This repository has been archived by the owner on Aug 14, 2024. It is now read-only.
We can start developing the Snakefile on a compute node (srun --pty bash) using 1 core, then when a user's Snakefile uses more than 1 core, the workflow manager will kill their session for grabbing more than was allocated. This becomes an HPC & shared resource lesson, and marks the turning point between live development of the script and launching it through the head node. Hat tip @tobyhodges
The text was updated successfully, but these errors were encountered:
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We can start developing the Snakefile on a compute node (
srun --pty bash
) using 1 core, then when a user's Snakefile uses more than 1 core, the workflow manager will kill their session for grabbing more than was allocated. This becomes an HPC & shared resource lesson, and marks the turning point between live development of the script and launching it through the head node. Hat tip @tobyhodgesThe text was updated successfully, but these errors were encountered: