diff --git a/docs/project/changelog.md b/docs/project/changelog.md
index 7b48546e5d3..f889ae6aef0 100644
--- a/docs/project/changelog.md
+++ b/docs/project/changelog.md
@@ -30,6 +30,8 @@ myst:
 
 - Upgraded scipy to 1.11.2 {pr}`4156`
 
+- Upgraded scikit-learn to 1.3.1 {pr}`4161`
+
 ## Version 0.24.0
 
 _September 13, 2023_
diff --git a/packages/scikit-learn/meta.yaml b/packages/scikit-learn/meta.yaml
index 9d8e576b0cd..cd2ec343e7c 100644
--- a/packages/scikit-learn/meta.yaml
+++ b/packages/scikit-learn/meta.yaml
@@ -1,13 +1,13 @@
 package:
   name: scikit-learn
-  version: 1.3.0
+  version: 1.3.1
   tag:
     - min-scipy-stack
   top-level:
     - sklearn
 source:
-  url: https://files.pythonhosted.org/packages/72/cd/4761675df1b3dd93072c89697278f3ed3dc004a60c034cd2603c43ff64b5/scikit-learn-1.3.0.tar.gz
-  sha256: 8be549886f5eda46436b6e555b0e4873b4f10aa21c07df45c4bc1735afbccd7a
+  url: https://files.pythonhosted.org/packages/4b/49/4b3e90399f49e875a1a6a0e72bb99d7e8fe808fcfe0a6a12b43a77e7d64d/scikit-learn-1.3.1.tar.gz
+  sha256: 1a231cced3ee3fa04756b4a7ab532dc9417acd581a330adff5f2c01ac2831fcf
 
 build:
   cflags: -Wno-implicit-function-declaration