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FYI: copynumber package removed from Bioconductor >=3.18 #538

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toddajohnson opened this issue Apr 2, 2024 · 0 comments
Open

FYI: copynumber package removed from Bioconductor >=3.18 #538

toddajohnson opened this issue Apr 2, 2024 · 0 comments

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@toddajohnson
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Our cluster's installed software was just completely updated, and in setting up needed packages for hmftools, R 4.3.2 Bioconductor 3.19 could not find the package copynumber; release notes said it was removed as of 3.18. It installed from previous source without complaint, but since this package has not had an active maintainer for about 7 years, I wonder about hidden faults; like non-support for hg38.

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