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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(calculate_color_distance)
export(calculate_hires)
export(calculate_recovered_uc_rmse)
export(calculate_replicate_state_uptake)
export(calculate_uc_from_hires_peptide)
export(compare_aggregation_methods)
export(create_fit_dataset)
export(create_monotony)
export(create_replicate_state_uptake_dataset)
export(create_two_state_dataset)
export(create_uc_distance_dataset)
export(create_uc_from_hires_dataset)
export(detect_class)
export(fit_1_exp)
export(fit_2_exp)
export(fit_3_exp)
export(fix_class_result)
export(get_example_control)
export(get_example_fit_k_params)
export(get_example_fit_k_params_2)
export(get_fit_results)
export(get_fit_values_info)
export(get_params_summary_image)
export(get_peptide_list)
export(get_peptide_list_v2)
export(get_residue_positions)
export(get_uc_distance)
export(hradexify)
export(move_dataset)
export(omit_amino)
export(plot_3d_structure_blank)
export(plot_3d_structure_hires)
export(plot_class_heatmap)
export(plot_color_distance)
export(plot_cov_class)
export(plot_double_uc)
export(plot_estimated_k)
export(plot_fitted_uc)
export(plot_hires)
export(plot_hires_components)
export(plot_interactive)
export(plot_k_distance)
export(plot_lm)
export(plot_monotony)
export(plot_n)
export(plot_params_map)
export(plot_recovered_uc_coverage)
export(plot_rss_hist)
export(plot_singular_uc)
export(plot_start_params)
export(plot_two_states)
export(plot_uc)
export(plot_uc_distance)
export(plot_uc_real_dist)
export(prepare_diff_data)
export(prepare_kin_dat)
export(recreate_uc)
export(run_compahradex)
export(run_hradex)
import(r3dmol)
importFrom(HaDeX,calculate_exp_masses_per_replicate)
importFrom(HaDeX,create_control_dataset)
importFrom(HaDeX,create_kinetic_dataset)
importFrom(HaDeX,create_state_uptake_dataset)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,reframe)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,summarize)
importFrom(dplyr,ungroup)
importFrom(ggiraph,geom_histogram_interactive)
importFrom(ggiraph,geom_line_interactive)
importFrom(ggiraph,geom_point_interactive)
importFrom(ggiraph,geom_rect_interactive)
importFrom(ggiraph,geom_segment_interactive)
importFrom(ggiraph,girafe)
importFrom(ggiraph,girafe_options)
importFrom(ggiraph,opts_hover)
importFrom(ggiraph,opts_hover_inv)
importFrom(ggiraph,opts_sizing)
importFrom(ggiraph,opts_tooltip)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,annotation_custom)
importFrom(ggplot2,coord_cartesian)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_errorbar)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_linerange)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_rect)
importFrom(ggplot2,geom_ribbon)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_colour_manual)
importFrom(ggplot2,scale_fill_gradient)
importFrom(ggplot2,scale_shape_manual)
importFrom(ggplot2,scale_x_log10)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,scale_y_log10)
importFrom(ggplot2,stat_function)
importFrom(ggplot2,stat_smooth)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_gray)
importFrom(ggplot2,theme_void)
importFrom(ggplot2,unit)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylim)
importFrom(glue,glue)
importFrom(gridExtra,grid.arrange)
importFrom(magick,image_read)
importFrom(purrr,map_chr)
importFrom(tibble,deframe)
importFrom(tibble,remove_rownames)
importFrom(tibble,rownames_to_column)