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Schedule for hackseq 2016 - the Vancouver Genomics Hackathon!

Saturday October 15 - Monday October 17, 2016

Life Sciences Institute (LSI), University of British Columbia (UBC)

Official Room bookings (aside from the East Atrium):

SAT OCT 15, 2016 Room 1416 8am-6pm

SUN OCT 16, 2016 Room 1410 and Room 1330 8am - 6pm

MON OCT 17, 2016 Room 1416 11am-6pm; Room 1330 2pm-8pm; LSC03 4pm-6pm

If you tweet, please use #Hackseq16

Saturday October 15

Day schedule

Time Event Location
8:30 AM Coffee and snacks LSI, UBC
9:00 AM hackseq kickoff - introductions, administrative announcements LSI, UBC
9:30 AM Break into teams and begin working LSI, UBC
12:00 PM Lunch LSI, UBC
1:00 PM Continue working in teams LSI, UBC
3:30 PM Continue working in teams LSI, UBC
5:30 PM Daily summary by teams and wrap-up LSI, UBC
6:00 PM hackseq social The Pit, UBC

Workshops and Talks (Room 1416) - see more info

Time Topic Slides
11:00 AM - 12:00 PM Introduction to HGVS Nomenclature and the Python hgvs package Slides and preparation
2:00 PM - 3:00 PM Gitting Git: Beginner workshop with Git, Github Google slides

Sunday October 16

Day schedule

Time Event Location
8:30 AM Coffee and snacks LSI, UBC
9:00 AM Any necessary additional administrative announcements LSI, UBC
9:10 AM Break into teams and begin working LSI, UBC
12:00 PM Lunch LSI, UBC
1:00 PM Continue working in teams LSI, UBC
3:30 PM Continue working in teams LSI, UBC
5:30 PM Daily summary by teams and wrap-up LSI, UBC

Workshops and Talks (Room 1416) - see more info

Time Topic Slides
11:00 AM - 12:00 PM Bioinformatic solutions for variant calling within segmental duplications Available later
2:00 PM - 3:30 PM Making R packages accessible to non-programmer collaborators using the VisRseq platform presentation slides and workshop materials

Monday October 17

Day schedule

Time Event Location
8:30 AM Coffee and snacks LSI, UBC
9:00 AM Any necessary additional administrative announcements LSI, UBC
9:10 AM Break into teams and begin working LSI, UBC
12:00 PM Lunch LSI, UBC
1:00 PM Continue working in teams LSI, UBC
4:00 PM Team project presentations (5 min each) LSI, UBC
5:00 PM Voting & a words from our sponsors LSI, UBC
5:15 PM Presentation of People's Choice award (sponsored by 10XGenomics) for favourite project LSI, UBC
5:30 PM hackseq social RSVP here Gallery 2.0, UBC

Workshops and Talks (Room 1416) - see more info

Time Topic Slides
11:00 AM - 11:25 AM Can My Computer Read Those Papers For Me? Slides
11:30 AM - 12:00 AM The ENCODE Encyclopedia: The Ultimate User's Guide Available later