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manual_amp_ui.py
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manual_amp_ui.py
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# -*- coding: utf-8 -*-
"""
Copyright 2017 Bernard Giroux, Elie Dumas-Lefebvre, Jerome Simon
email: [email protected]
This file is part of BhTomoPy.
BhTomoPy is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
"""
import sys
from PyQt5 import QtGui, QtWidgets, QtCore
from matplotlib.axes import Axes
from matplotlib.backends.backend_qt5agg import FigureCanvasQTAgg, NavigationToolbar2QT
from matplotlib.figure import Figure
import numpy as np
import scipy as spy
from scipy import signal
from database import BhTomoDb
from mog import Mog
from utils_ui import MyQLabel, choose_mog, save_mog
class ManualAmpUI(QtWidgets.QFrame):
KeyPressed = QtCore.pyqtSignal()
def __init__(self, parent=None):
super(ManualAmpUI, self).__init__(parent)
self.setWindowTitle("BhTomoPy/Manual Traveltime Picking")
self.mog = 0
self.db = BhTomoDb()
self.init_UI()
# self.upperFig.UpperTracePickedSignal.connect(self.lowerFig.plot_trace_data)
self.upperFig.UpperTracePickedSignal.connect(self.update_control_center)
self.lowerFig.LowerTracePickedSignal.connect(self.upperFig.plot_trace)
self.lowerFig.LowerTracePickedSignal.connect(self.update_control_center)
def next_trace(self):
n = int(self.Tnum_Edit.text())
n += 1
self.Tnum_Edit.setText(str(n))
self.update_control_center()
def prev_trace(self):
n = int(self.Tnum_Edit.text())
n -= 1
self.Tnum_Edit.setText(str(n))
self.update_control_center()
def update_control_center(self):
n = int(self.Tnum_Edit.text()) - 1
self.xRx_label.setText(str(self.mog.data.Rx_x[n]))
self.xTx_label.setText(str(self.mog.data.Tx_x[n]))
self.yRx_label.setText(str(self.mog.data.Rx_y[n]))
self.yTx_label.setText(str(self.mog.data.Tx_y[n]))
self.zRx_label.setText(str(np.round(self.mog.data.Rx_z[n], 3)))
self.zTx_label.setText(str(self.mog.data.Tx_z[n]))
self.ntrace_label.setText(str(self.mog.data.ntrace))
self.update_settings_edits()
self.upperFig.plot_trace()
self.lowerFig.plot_spectra()
def update_settings_edits(self):
self.value_tmin_edit.setText(str(np.round(self.mog.data.timestp[0], 4)))
self.value_tmax_edit.setText(str(np.round(self.mog.data.timestp[-1], 4)))
self.value_z_surf_edit.setText(str(self.mog.Rx.fdata[0, 2]))
self.num_tx_freq_edit.setText(str(self.mog.data.rnomfreq))
def reinit_trace(self):
n = int(self.Tnum_Edit.text()) - 1
self.mog.amp_done[n] = 0
self.mog.amp_tmin[n] = -1.0
self.mog.amp_tmin[n] = -1.0
self.update_control_center()
def next_trace_to_pick(self):
ind = np.where(self.mog.amp_done == 0)[0]
to_pick = ind[0] + 1
self.Tnum_Edit.setText(str(to_pick))
self.update_control_center()
def reinit_tnum(self):
self.Tnum_Edit.setText('1')
def plot_stats(self):
self.statsFig1 = StatsFig1()
self.statsFig1.plot_stats(self.mog)
self.statsFig1.show()
def savefile(self):
try:
save_mog(self.mog, self.db)
QtWidgets.QMessageBox.information(self, 'Success', "Database was saved successfully",
buttons=QtWidgets.QMessageBox.Ok)
except ReferenceError as e:
QtWidgets.QMessageBox.Warning(self, 'Success', str(e),
buttons=QtWidgets.QMessageBox.Ok)
def openfile(self):
item, self.db = choose_mog(self.db)
if item is not None:
self.mog = item
self.update_control_center()
def import_tt_file(self):
filename = QtWidgets.QFileDialog.getOpenFileName(self, 'Import')[0]
self.load_tt_file(filename)
def load_tt_file(self, filename):
try:
info_tt = np.loadtxt(filename)
for row in info_tt:
trc_number = int(float(row[0]))
tt = float(row[1])
et = float(row[2])
self.mog.tt_done[trc_number - 1] = 1
self.mog.tt[trc_number - 1] = tt
self.mog.et[trc_number - 1] = et
self.update_control_center()
except:
QtWidgets.QMessageBox.warning(self, 'Warning', "Could not import {} file".format(filename), buttons=QtWidgets.QMessageBox.Ok)
def init_UI(self):
blue_palette = QtGui.QPalette()
blue_palette.setColor(QtGui.QPalette.Foreground, QtCore.Qt.darkCyan)
# ------ Creation of the Manager for the Upper figure ------- #
self.upperFig = UpperFig(self)
self.uppertool = NavigationToolbar2QT(self.upperFig, self)
self.uppermanager = QtWidgets.QWidget()
uppermanagergrid = QtWidgets.QGridLayout()
uppermanagergrid.addWidget(self.uppertool, 0, 0)
uppermanagergrid.addWidget(self.upperFig, 1, 0)
uppermanagergrid.setContentsMargins(0, 0, 0, 0)
uppermanagergrid.setVerticalSpacing(3)
self.uppermanager.setLayout(uppermanagergrid)
# ------ Creation of the Manager for the Lower figure ------- #
self.lowerFig = LowerFig(self)
self.lowermanager = QtWidgets.QWidget()
lowermanagergrid = QtWidgets.QGridLayout()
lowermanagergrid.addWidget(self.lowerFig, 0, 0)
lowermanagergrid.setContentsMargins(0, 0, 0, 0)
self.lowermanager.setLayout(lowermanagergrid)
# ------- Widgets Creation ------- #
# --- Buttons --- #
btn_load = QtWidgets.QPushButton("Load Curved Rays")
btn_Prev = QtWidgets.QPushButton("Previous Trace")
btn_Next = QtWidgets.QPushButton("Next Trace")
btn_Next_Pick = QtWidgets.QPushButton("Next Trace to Pick")
btn_Reini = QtWidgets.QPushButton("Reinitialize Trace")
btn_Upper = QtWidgets.QPushButton("Activate Picking")
btn_Stats = QtWidgets.QPushButton("Statistics")
btn_fit = QtWidgets.QPushButton("Fit Spectra")
# - Buttons' Actions - #
btn_Next.clicked.connect(self.next_trace)
btn_Prev.clicked.connect(self.prev_trace)
btn_Upper.clicked.connect(self.upper_trace_isClicked)
btn_Stats.clicked.connect(self.plot_stats)
btn_Reini.clicked.connect(self.reinit_trace)
btn_Next_Pick.clicked.connect(self.next_trace_to_pick)
# --- Label --- #
trc_Label = MyQLabel("Trace number :", ha='right')
t_min_label = MyQLabel("t min", ha='right')
t_max_label = MyQLabel("t max", ha='right')
ang_min_label = MyQLabel("Minimum angle", ha='right')
z_surf_label = MyQLabel("Z surface", ha='right')
position_label = MyQLabel(("Position Tx--Rx"), ha='center')
x_label = MyQLabel("x", ha='center')
y_label = MyQLabel("y", ha='center')
z_label = MyQLabel("z", ha='center')
Tx_label = MyQLabel("Tx:", ha='right')
Rx_label = MyQLabel("Rx:", ha='right')
centroid_freq_label = MyQLabel('Centroid freq.: ', ha='right')
centroid_var_label = MyQLabel('Var. Centroid: ', ha='right')
freq1_label = MyQLabel('MHz', ha='center')
freq2_label = MyQLabel('MHz', ha='center')
trace_label = MyQLabel("traces", ha='center')
tx_freq_label = MyQLabel("Tx Frequency [MHz]", ha='right')
f_min_label = MyQLabel("Min F centroid", ha='right')
f_max_label = MyQLabel("Max F centroid", ha='right')
auto_pick_label = MyQLabel("Window - Auto pick", ha='right')
self.num_freq1_label = MyQLabel('0', ha='center')
self.num_freq2_label = MyQLabel('0', ha='center')
self.xTx_label = MyQLabel("", ha='center')
self.yTx_label = MyQLabel("", ha='center')
self.zTx_label = MyQLabel("", ha='center')
self.xRx_label = MyQLabel("", ha='center')
self.yRx_label = MyQLabel("", ha='center')
self.zRx_label = MyQLabel("", ha='center')
self.ntrace_label = MyQLabel("", ha='center')
# --- Edits --- #
self.Tnum_Edit = QtWidgets.QLineEdit('1')
self.num_tx_freq_edit = QtWidgets.QLineEdit()
self.value_f_min_edit = QtWidgets.QLineEdit('1')
self.value_f_max_edit = QtWidgets.QLineEdit('175')
self.value_window_edit = QtWidgets.QLineEdit('30')
self.value_tmin_edit = QtWidgets.QLineEdit()
self.value_tmax_edit = QtWidgets.QLineEdit()
self.value_ang_min_edit = QtWidgets.QLineEdit('45')
self.value_z_surf_edit = QtWidgets.QLineEdit()
# - Edits' Disposition - #
self.Tnum_Edit.setAlignment(QtCore.Qt.AlignCenter)
self.num_tx_freq_edit.setAlignment(QtCore.Qt.AlignCenter)
self.value_f_min_edit.setAlignment(QtCore.Qt.AlignCenter)
self.value_f_max_edit.setAlignment(QtCore.Qt.AlignCenter)
self.value_window_edit.setAlignment(QtCore.Qt.AlignCenter)
self.value_tmin_edit.setAlignment(QtCore.Qt.AlignCenter)
self.value_tmax_edit.setAlignment(QtCore.Qt.AlignCenter)
self.value_ang_min_edit.setAlignment(QtCore.Qt.AlignCenter)
self.value_z_surf_edit.setAlignment(QtCore.Qt.AlignCenter)
# - Edits' Disposition - #
self.Tnum_Edit.setFixedWidth(100)
self.Tnum_Edit.setAlignment(QtCore.Qt.AlignHCenter)
# - Edits' Actions - #
self.Tnum_Edit.editingFinished.connect(self.update_control_center)
# --- Actions --- #
openAction = QtWidgets.QAction('Open main data file', self)
# openAction.triggered.connect(self.openmain.show)
openAction.triggered.connect(self.openfile)
saveAction = QtWidgets.QAction('Save', self)
saveAction.triggered.connect(self.savefile)
importAction = QtWidgets.QAction('Import ...', self)
importAction.triggered.connect(self.import_tt_file)
# --- ToolBar --- #
self.tool = QtWidgets.QMenuBar()
fileMenu = self.tool.addMenu('&File')
fileMenu.addAction(openAction)
fileMenu.addAction(saveAction)
fileMenu.addAction(importAction)
optionMenu = self.tool.addMenu('&Options')
radiationMenu = optionMenu.addMenu('&Radiation Pattern')
centroidMenu = optionMenu.addMenu('&Centroid f (S transf.)')
hybridMenu = optionMenu.addMenu('&Hybrid data')
spectrumMenu = optionMenu.addMenu('&Spectrum fitting')
unitsMenu = optionMenu.addMenu('&Units of frequency')
sinAction = QtWidgets.QAction('&Sin (theta)', self)
sin2Action = QtWidgets.QAction('&Sin2 (theta)', self)
showspectrumAction = QtWidgets.QAction('&Show frequency spectrum', self)
showspectrumtimeAction = QtWidgets.QAction('&Show time - frequency spectrum', self)
firstcycleAction = QtWidgets.QAction('&Evaluate at start of 1st cycle', self)
firsthalfcycleAction = QtWidgets.QAction('&Evaluate at 1st half-cycle peak', self)
maxenergyAction = QtWidgets.QAction('&Evaluate at maximum of energy', self)
maxenergyAction = QtWidgets.QAction('&Evaluate at maximum of amplitude', self)
# sinAction.setCheckable(True)
# sin2Action.setCheckable(True)
# sinAction.setChecked(True)
# radiationMenu.addAction(sinAction)
# radiationMenu.addAction(sin2Action)
radiationActionGroup = QtWidgets.QActionGroup(self)
radiationActionGroup.addAction(sinAction)
radiationActionGroup.addAction(sin2Action)
# radiationMenu.addAction(radiationActionGroup)
# --- Checkboxes --- #
self.weight_check = QtWidgets.QCheckBox('Weighting 1/(S/N)')
self.process_check = QtWidgets.QCheckBox("Process picked tt traces")
self.Wave_check = QtWidgets.QCheckBox("Wavelet tranf. denoising")
self.ap_win_check = QtWidgets.QCheckBox("Use AP Window")
self.hybrid_check = QtWidgets.QCheckBox("Genrerate hybrid Data")
# --- Text Edits --- #
info_Tedit = QtWidgets.QTextEdit()
info_Tedit.setReadOnly(True)
# --- ComboBox --- #
self.option_combo = QtWidgets.QComboBox()
# - ComboBox Items - #
items = ['Centroid freq. (fft)', 'Centroid freq. (S-transform)', 'Peak-to-peak amplutide', 'Maximum absolute amplitude']
self.option_combo.addItems(items)
# ------- subWidgets ------- #
# --- freq1 subwidget --- #
sub_freq1_widget = QtWidgets.QWidget()
sub_freq1_grid = QtWidgets.QGridLayout()
sub_freq1_grid.addWidget(self.num_freq1_label, 0, 0)
sub_freq1_grid.addWidget(freq1_label, 0, 1)
sub_freq1_grid.setContentsMargins(0, 0, 0, 0)
sub_freq1_widget.setLayout(sub_freq1_grid)
# --- freq2 subwidget --- #
sub_freq2_widget = QtWidgets.QWidget()
sub_freq2_grid = QtWidgets.QGridLayout()
sub_freq2_grid.addWidget(self.num_freq2_label, 0, 0)
sub_freq2_grid.addWidget(freq2_label, 0, 1)
sub_freq2_grid.setContentsMargins(0, 0, 0, 0)
sub_freq2_widget.setLayout(sub_freq2_grid)
# --- Trace Subwidget --- #
Sub_Trace_Widget = QtWidgets.QWidget()
Sub_Trace_Grid = QtWidgets.QGridLayout()
Sub_Trace_Grid.addWidget(trc_Label, 0, 0)
Sub_Trace_Grid.addWidget(self.Tnum_Edit, 0, 1)
Sub_Trace_Grid.setContentsMargins(0, 0, 0, 0)
Sub_Trace_Grid.setAlignment(QtCore.Qt.AlignCenter)
Sub_Trace_Widget.setLayout(Sub_Trace_Grid)
# --- Info Subwidget --- #
Sub_Info_widget = QtWidgets.QWidget()
Sub_Info_grid = QtWidgets.QGridLayout()
Sub_Info_grid.addWidget(position_label, 0, 1, 1, 3)
Sub_Info_grid.addWidget(x_label, 2, 1)
Sub_Info_grid.addWidget(y_label, 2, 2)
Sub_Info_grid.addWidget(z_label, 2, 3)
Sub_Info_grid.addWidget(Tx_label, 3, 0)
Sub_Info_grid.addWidget(self.xTx_label, 3, 1)
Sub_Info_grid.addWidget(self.yTx_label, 3, 2)
Sub_Info_grid.addWidget(self.zTx_label, 3, 3)
Sub_Info_grid.addWidget(Rx_label, 4, 0)
Sub_Info_grid.addWidget(self.xRx_label, 4, 1)
Sub_Info_grid.addWidget(self.yRx_label, 4, 2)
Sub_Info_grid.addWidget(self.zRx_label, 4, 3)
Sub_Info_grid.addWidget(self.ntrace_label, 5, 1)
Sub_Info_grid.addWidget(trace_label, 5, 2)
Sub_Info_grid.addWidget(centroid_freq_label, 8, 0)
Sub_Info_grid.addWidget(sub_freq1_widget, 8, 1)
Sub_Info_grid.addWidget(centroid_var_label, 9, 0)
Sub_Info_grid.addWidget(sub_freq2_widget, 9, 1)
Sub_Info_widget.setLayout(Sub_Info_grid)
Sub_Info_widget.setStyleSheet("background: white")
# --- Buttons SubWidget --- #
sub_button_widget = QtWidgets.QWidget()
sub_button_grid = QtWidgets.QGridLayout()
sub_button_grid.addWidget(btn_load, 1, 0, 1, 4)
sub_button_grid.addWidget(btn_Upper, 2, 0, 1, 4)
sub_button_grid.addWidget(Sub_Trace_Widget, 3, 1, 1, 2)
sub_button_grid.addWidget(btn_Prev, 4, 0, 1, 2)
sub_button_grid.addWidget(btn_Next, 4, 2, 1, 2)
sub_button_grid.addWidget(btn_Next_Pick, 5, 0, 1, 4)
sub_button_grid.addWidget(btn_Reini, 6, 0, 1, 4)
sub_button_grid.addWidget(btn_Stats, 7, 0, 1, 4)
sub_button_grid.addWidget(btn_fit, 8, 0, 1, 4)
sub_button_widget.setLayout(sub_button_grid)
# --- Info Groupbox --- #
info_group = QtWidgets.QGroupBox('Infos')
info_grid = QtWidgets.QGridLayout()
info_grid.addWidget(Sub_Info_widget)
info_group.setLayout(info_grid)
# --- Settings GroupBox --- #
settings_group = QtWidgets.QGroupBox('Settings')
sub_settings_grid = QtWidgets.QGridLayout()
sub_settings_grid.addWidget(self.hybrid_check, 0, 0)
sub_settings_grid.addWidget(self.option_combo, 0, 1)
sub_settings_grid.addWidget(self.weight_check, 1, 0)
sub_settings_grid.addWidget(self.process_check, 2, 0)
sub_settings_grid.addWidget(self.ap_win_check, 3, 0)
sub_settings_grid.addWidget(self.Wave_check, 4, 0)
sub_settings_grid.addWidget(self.num_tx_freq_edit, 1, 2)
sub_settings_grid.addWidget(self.value_f_min_edit, 2, 2)
sub_settings_grid.addWidget(self.value_f_max_edit, 3, 2)
sub_settings_grid.addWidget(self.value_window_edit, 4, 2)
sub_settings_grid.addWidget(tx_freq_label, 1, 1)
sub_settings_grid.addWidget(f_min_label, 2, 1)
sub_settings_grid.addWidget(f_max_label, 3, 1)
sub_settings_grid.addWidget(auto_pick_label, 4, 1)
sub_settings_grid.addWidget(self.value_tmin_edit, 1, 4)
sub_settings_grid.addWidget(self.value_tmax_edit, 2, 4)
sub_settings_grid.addWidget(self.value_ang_min_edit, 3, 4)
sub_settings_grid.addWidget(self.value_z_surf_edit, 4, 4)
sub_settings_grid.addWidget(t_min_label, 1, 3)
sub_settings_grid.addWidget(t_max_label, 2, 3)
sub_settings_grid.addWidget(ang_min_label, 3, 3)
sub_settings_grid.addWidget(z_surf_label, 4, 3)
settings_group.setLayout(sub_settings_grid)
# --- Control Center SubWidget --- #
Control_Center_GroupBox = QtWidgets.QGroupBox("Control Center")
Control_Center_Grid = QtWidgets.QGridLayout()
Control_Center_Grid.addWidget(info_group, 0, 0)
Control_Center_Grid.addWidget(settings_group, 1, 0, 1, 2)
Control_Center_Grid.addWidget(sub_button_widget, 0, 1)
Control_Center_GroupBox.setLayout(Control_Center_Grid)
# --- Master Grid Disposition --- #
master_grid = QtWidgets.QGridLayout()
master_grid.addWidget(self.tool, 0, 0, 1, 3)
master_grid.addWidget(self.uppermanager, 1, 0, 1, 3)
master_grid.addWidget(self.lowermanager, 2, 0, 1, 2)
master_grid.addWidget(Control_Center_GroupBox, 2, 2)
master_grid.setRowStretch(1, 100)
master_grid.setColumnStretch(1, 100)
master_grid.setContentsMargins(10, 10, 10, 10)
master_grid.setVerticalSpacing(0)
self.setLayout(master_grid)
def upper_trace_isClicked(self):
if self.sender().isFlat():
self.sender().setFlat(False)
self.upperFig.isTracingOn = False
else:
self.sender().setFlat(True)
self.upperFig.isTracingOn = True
def lower_trace_isClicked(self):
if self.sender().isFlat():
self.sender().setFlat(False)
self.lowerFig.isTracingOn = False
else:
self.sender().setFlat(True)
self.lowerFig.isTracingOn = True
class UpperFig(FigureCanvasQTAgg):
UpperTracePickedSignal = QtCore.pyqtSignal(bool)
def __init__(self, ui):
fig_width, fig_height = 4, 4
fig = Figure(figsize=(fig_width, fig_height), facecolor='white')
super(UpperFig, self).__init__(fig)
self.init_figure()
self.trc_number = 0
self.ui = ui
self.mpl_connect('button_press_event', self.onclick)
# self.mpl_connect('key_press_event', self.press)
self.isTracingOn = False
def init_figure(self):
self.ax = self.figure.add_axes([0.05, 0.13, 0.935, 0.85])
self.ax.yaxis.set_ticks_position('left')
self.ax.xaxis.set_ticks_position('bottom')
self.ax.set_ylabel('Amplitude')
self.trace, = self.ax.plot([],
[],
color='b')
self.pick_amp_tmin = self.ax.axvline(-100,
ymin=0,
ymax=1,
color='g')
self.pick_amp_tmax = self.ax.axvline(-100,
ymin=0,
ymax=1,
color='g')
self.pick_amp_tmax.set_visible(False)
self.pick_amp_tmin.set_visible(False)
self.trace.set_visible(False)
def plot_trace(self):
self.pick_amp_tmax.set_visible(True)
self.pick_amp_tmin.set_visible(True)
self.trace.set_visible(True)
n = int(self.ui.Tnum_Edit.text())
self.trc_number = n - 1
trace = self.ui.mog.data.rdata[:, self.trc_number]
self.ax.set_xlim(self.ui.mog.data.timestp[0], self.ui.mog.data.timestp[-1])
self.ax.set_ylim(min(trace.flatten()), max(trace.flatten()))
self.pick_amp_tmin.set_xdata(self.ui.mog.amp_tmin[self.trc_number])
self.pick_amp_tmax.set_xdata(self.ui.mog.amp_tmax[self.trc_number])
self.trace.set_ydata(trace)
self.trace.set_xdata(self.ui.mog.data.timestp)
self.draw()
def onclick(self, event):
if self.isTracingOn is False:
return
self.x, self.y = event.x, event.y
if event.button == 1:
if self.x is not None and self.y is not None:
self.ui.mog.amp_tmin[self.trc_number] = event.xdata
self.ui.update_control_center()
self.UpperTracePickedSignal.emit(True)
elif event.button == 2:
self.ui.next_trace()
elif event.button == 3:
if self.x is not None and self.y is not None:
self.ui.mog.amp_tmax[self.trc_number] = event.xdata
self.ui.update_control_center()
self.UpperTracePickedSignal.emit(True)
self.draw()
class LowerFig(FigureCanvasQTAgg):
LowerTracePickedSignal = QtCore.pyqtSignal(bool)
def __init__(self, ui):
fig_width, fig_height = 4, 4
fig = Figure(figsize=(fig_width, fig_height), facecolor='white')
super(LowerFig, self).__init__(fig)
self.init_figure()
self.ui = ui
self.trace_number = 0
self.mpl_connect('button_press_event', self.onclick)
self.isTracingOn = False
def init_figure(self):
self.ax = self.figure.add_axes([0.07, 0.05, 0.9, 0.85])
self.ax.yaxis.set_ticks_position('left')
self.ax.xaxis.set_ticks_position('bottom')
self.spectrum_plot, = self.ax.plot([],
[],
color='b')
def plot_spectra(self):
self.ax.cla()
if 'ns' in self.ui.mog.data.tunits:
fac_f = 10**6
fac_t = 10**-9
elif 'ms' in self.ui.mog.data.tunits:
fac_f = 10**3
fac_t = 10**-3
dt = self.ui.mog.data.timec * self.ui.mog.fac_dt
dt = dt * fac_t
Fs = 1 / dt
n = int(self.ui.Tnum_Edit.text())
self.trc_number = n - 1
trace = self.ui.mog.data.rdata[:, self.trc_number]
if self.ui.mog.amp_tmin[self.trc_number] != -1 and self.ui.mog.amp_tmax[self.trc_number] != -1:
imin = np.argmin((np.abs(self.ui.mog.data.timestp - self.ui.mog.amp_tmin[self.trc_number])))
imax = np.argmin((np.abs(self.ui.mog.data.timestp - self.ui.mog.amp_tmax[self.trc_number])))
trace = trace[imin:imax]
# freq, tmp = spy.signal.welch(trace, Fs)
# Pxx = tmp.T
Pxx = np.fft.rfft(trace, axis=0)
freq = np.fft.rfftfreq(len(Pxx), Fs)
print(freq)
print(freq.shape)
print(Pxx.shape)
# self.ax.plot(Pxx, freq)
self.draw()
# self.spectrum_plot.set_ydata(Pxx)
# self.ax.set_xlim(min(Pxx), max(Pxx))
def onclick(self, event):
if self.isTracingOn is False:
return
self.x, self.y = event.x, event.y
if event.button == 1:
if self.x is not None and self.y is not None:
y_lim = self.ax.get_ylim()
x_lim = self.ax.get_xlim()
if self.tt.tt_picking_radio.isChecked():
if self.tt.main_data_radio.isChecked():
print('Traveltime being picked')
self.tt.mog.tt[self.trc_number] = event.ydata
self.tt.mog.tt_done[self.trc_number] = 1
self.picked_tt_circle.set_ydata(self.tt.mog.tt[self.trc_number])
elif self.tt.t0_before_radio.isChecked():
print('t0_before being picked')
self.tt.air[self.tt.mog.av].tt[self.trc_number] = event.ydata
self.tt.air[self.tt.mog.av].tt_done[self.trc_number] = 1
self.picked_tt_circle.set_ydata(self.tt.air[self.tt.mog.av].tt[self.trc_number])
elif self.tt.t0_after_radio.isChecked():
self.tt.air[self.tt.mog.ap].tt[self.trc_number] = event.ydata
self.tt.air[self.tt.mog.ap].tt_done[self.trc_number] = 1
self.picked_tt_circle.set_ydata(self.tt.air[self.tt.mog.av].tt[self.trc_number])
elif self.tt.trace_selec_radio.isChecked():
idx = np.argmin((np.abs(np.arange(self.tt.mog.data.ntrace) - event.xdata)))
self.tt.Tnum_Edit.setText(str(idx + 1))
self.tt.update_control_center()
self.ax.set_ylim(y_lim[0], y_lim[-1])
self.LowerTracePickedSignal.emit(True)
elif event.button == 2:
if self.tt.jump_checkbox.isChecked():
self.tt.next_trace_to_pick()
else:
self.tt.next_trace()
elif event.button == 3:
if self.x is not None and self.y is not None:
if self.tt.main_data_radio.isChecked():
self.tt.mog.et[self.trc_number] = np.abs(self.tt.mog.tt[self.trc_number] - event.ydata)
elif self.tt.t0_before_radio.isChecked():
self.tt.air[self.tt.mog.av].et[self.trc_number] = np.abs(self.tt.air[self.tt.mog.av].tt[self.trc_number] - event.ydata)
elif self.tt.t0_after_radio.isChecked():
self.tt.air[self.tt.mog.ap].et[self.trc_number] = np.abs(self.tt.air[self.tt.mog.ap].tt[self.trc_number] - event.ydata)
self.LowerTracePickedSignal.emit(True)
self.draw()
class StatsFig1(FigureCanvasQTAgg):
def __init__(self, parent=None):
fig = Figure(figsize=(100, 100), facecolor='white')
super(StatsFig1, self).__init__(fig)
self.init_figure()
def init_figure(self):
self.ax1 = self.figure.add_axes([0.1, 0.1, 0.2, 0.25])
self.ax2 = self.figure.add_axes([0.4, 0.1, 0.2, 0.25])
self.ax3 = self.figure.add_axes([0.7, 0.1, 0.2, 0.25])
self.ax4 = self.figure.add_axes([0.1, 0.55, 0.2, 0.25])
self.ax5 = self.figure.add_axes([0.4, 0.55, 0.2, 0.25])
self.ax6 = self.figure.add_axes([0.7, 0.55, 0.2, 0.25])
def plot_stats(self, mog):
done = (mog.tt_done + mog.in_vect.astype(int)) - 1
ind = np.nonzero(done == 1)[0]
print(ind)
tt, t0 = mog.getCorrectedTravelTimes()
print(tt)
et = mog.et[ind]
tt = tt[ind]
hyp = np.sqrt((mog.data.Tx_x[ind] - mog.data.Rx_x[ind])**2 +
(mog.data.Tx_y[ind] - mog.data.Rx_y[ind])**2 +
(mog.data.Tx_z[ind] - mog.data.Rx_z[ind])**2)
dz = mog.data.Rx_z[ind] - mog.data.Tx_z[ind]
theta = 180 / np.pi * np.arcsin(dz / hyp)
vapp = hyp / (tt - t0[ind])
# n = np.arange(len(ind)-1)
# n = n[ind]
ind2 = np.less(vapp, 0)
ind2 = np.nonzero(ind2)[0]
self.ax4.plot(hyp, tt, marker='o', ls='None')
self.ax5.plot(theta, hyp / tt, marker='o', ls='None')
self.ax2.plot(theta, vapp, marker='o', ls='None')
self.ax6.plot(t0)
self.ax1.plot(hyp, et, marker='o', ls='None')
self.ax3.plot(theta, et, marker='o', ls='None')
self.figure.suptitle('{}'.format(mog.name), fontsize=20)
Axes.set_ylabel(self.ax4, ' Time [{}]'.format(mog.data.tunits)) # @UndefinedVariable
Axes.set_xlabel(self.ax4, 'Straight Ray Length[{}]'.format(mog.data.cunits)) # @UndefinedVariable
Axes.set_ylabel(self.ax1, 'Standard Deviation') # @UndefinedVariable
Axes.set_xlabel(self.ax1, 'Straight Ray Length[{}]'.format(mog.data.cunits)) # @UndefinedVariable
Axes.set_ylabel(self.ax5, 'Apparent Velocity [{}/{}]'.format(mog.data.cunits, mog.data.tunits)) # @UndefinedVariable
Axes.set_xlabel(self.ax5, 'Angle w/r to horizontal[°]') # @UndefinedVariable
Axes.set_title(self.ax5, 'Velocity before correction') # @UndefinedVariable
Axes.set_ylabel(self.ax2, 'Apparent Velocity [{}/{}]'.format(mog.data.cunits, mog.data.tunits)) # @UndefinedVariable
Axes.set_xlabel(self.ax2, 'Angle w/r to horizontal[°]') # @UndefinedVariable
Axes.set_title(self.ax2, 'Velocity after correction') # @UndefinedVariable
Axes.set_ylabel(self.ax6, ' Time [{}]'.format(mog.data.tunits)) # @UndefinedVariable
Axes.set_xlabel(self.ax6, 'Shot Number') # @UndefinedVariable
Axes.set_title(self.ax6, '$t_0$ drift in air') # @UndefinedVariable
Axes.set_ylabel(self.ax3, 'Standard Deviation') # @UndefinedVariable
Axes.set_xlabel(self.ax3, 'Angle w/r to horizontal[°]') # @UndefinedVariable
if __name__ == '__main__':
app = QtWidgets.QApplication(sys.argv)
manual_ui = ManualAmpUI()
# manual_ui.update_control_center()
# manual_ui.update_settings_edits()
manual_ui.show()
# manual_ui.load_tt_file('C:\\Users\\Utilisateur\\Documents\\MATLAB\\t0302tt')
sys.exit(app.exec_())