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Update cif2system.py
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williamyxl authored Sep 9, 2023
1 parent f37ad4e commit 657e521
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion mofa/simulation/cif2lammps/cif2system.py
Original file line number Diff line number Diff line change
Expand Up @@ -314,7 +314,7 @@ def initialize_system(filename, charges=False, small_molecule_cutoff=5, read_pym
data['index'] = index
SM = nx.relabel_nodes(SM, sm_remap)

return {'box': (A, B, C, alpha, beta, gamma), 'graph': framework, 'SM_graph': SM, 'max_ind': index}
return {'box': (A, B, C, alpha, beta, gamma), 'graph': framework, 'SM_graph': SM, 'max_ind': index, 'names': names}


def duplicate_system(system, replications, small_molecule_cutoff=10):
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