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SingleSampleQc.exome.json
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SingleSampleQc.exome.json
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{
"SingleSampleQc.input_bam": "",
"SingleSampleQc.base_name": "",
"SingleSampleQc.contamination_sites_ud": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.contam.UD",
"SingleSampleQc.contamination_sites_bed": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.contam.bed",
"SingleSampleQc.contamination_sites_mu": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.contam.mu",
"SingleSampleQc.ref_cache": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.ref_cache.tar.gz",
"SingleSampleQc.ref_dict": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.dict",
"SingleSampleQc.ref_fasta": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta",
"SingleSampleQc.ref_fasta_index": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.fai",
"SingleSampleQc.coverage_interval_list": "gs://genomics-public-data/references/hg38/v0/exome_evaluation_regions.v1.interval_list",
"SingleSampleQc.preemptible_tries": 3,
"SingleSampleQc.is_wgs": "false",
"SingleSampleQc.evaluation_thresholds": "",
"SingleSampleQc.CollectRawWgsMetrics.memory_multiplier": 4,
"SingleSampleQc.CollectHsMetrics.memory_multiplier": 2,
"SingleSampleQc.ValidateSamFile.memory_multiplier": 2
}