diff --git a/.ci/jenkins.sh b/.ci/jenkins.sh
index f99880bd..7ffaf6d8 100755
--- a/.ci/jenkins.sh
+++ b/.ci/jenkins.sh
@@ -637,7 +637,9 @@ function install_tools() {
     log "Installing tools"
     for tool_yaml in "${TOOL_YAMLS[@]}"; do
         log "Installing tools in ${tool_yaml}"
-        log_exec shed-tools install -v -g "$GALAXY_URL" -a "$API_KEY" -t "$tool_yaml" || {
+        # FIXME: after https://github.com/galaxyproject/ephemeris/pull/181 is merged you would need to remove
+        # --skip_install_resolver_dependencies for install_resolver_dependencies in tools.yaml to work
+        log_exec shed-tools install --skip_install_resolver_dependencies -v -g "$GALAXY_URL" -a "$API_KEY" -t "$tool_yaml" || {
             log_error "Tool installation failed"
             show_logs
             show_paths
diff --git a/usegalaxy.org/annotation.yml.lock b/usegalaxy.org/annotation.yml.lock
index 42248e86..d23548f4 100644
--- a/usegalaxy.org/annotation.yml.lock
+++ b/usegalaxy.org/annotation.yml.lock
@@ -1,11 +1,12 @@
 install_repository_dependencies: true
-install_resolver_dependencies: true
+install_resolver_dependencies: false
 install_tool_dependencies: false
 tool_panel_section_label: Annotation
 tools:
 - name: prokka
   owner: crs4
   revisions:
+  - 8a22554cdde2
   - bf68eb663bc3
   - eaee459f3d69
   - 111884f0d912