From 8d2cf66888663dbdb40b427cf9f45edc1d1e7957 Mon Sep 17 00:00:00 2001 From: mvdbeek Date: Mon, 17 Jun 2024 17:46:28 +0200 Subject: [PATCH] Install ebi-gxa single-cell tools --- usegalaxy.org/single_cell.yml | 10 ++++++++++ usegalaxy.org/single_cell.yml.lock | 30 ++++++++++++++++++++++++++++++ 2 files changed, 40 insertions(+) diff --git a/usegalaxy.org/single_cell.yml b/usegalaxy.org/single_cell.yml index 0c226835..aa9cc326 100644 --- a/usegalaxy.org/single_cell.yml +++ b/usegalaxy.org/single_cell.yml @@ -68,6 +68,16 @@ tools: owner: ebi-gxa - name: gtf2gene_list owner: ebi-gxa +- name: scanpy_run_fdg + owner: ebi-gxa +- name: scanpy_run_diffmap + owner: ebi-gxa +- name: scanpy_run_paga + owner: ebi-gxa +- name: scanpy_run_dpt + owner: ebi-gxa +- name: scanpy_plot_trajectory + owner: ebi-gxa - name: alevin owner: bgruening - name: droplet_barcode_plot diff --git a/usegalaxy.org/single_cell.yml.lock b/usegalaxy.org/single_cell.yml.lock index 384848c1..2dbb7415 100644 --- a/usegalaxy.org/single_cell.yml.lock +++ b/usegalaxy.org/single_cell.yml.lock @@ -345,6 +345,36 @@ tools: - 1a642de6db01 tool_panel_section_id: single_cell tool_panel_section_label: Single-cell +- name: scanpy_run_fdg + owner: ebi-gxa + revisions: + - be019b069e31 + tool_panel_section_id: single_cell + tool_panel_section_label: Single-cell +- name: scanpy_run_diffmap + owner: ebi-gxa + revisions: + - 79cc06a557b0 + tool_panel_section_id: single_cell + tool_panel_section_label: Single-cell +- name: scanpy_run_paga + owner: ebi-gxa + revisions: + - b2768cae00a1 + tool_panel_section_id: single_cell + tool_panel_section_label: Single-cell +- name: scanpy_run_dpt + owner: ebi-gxa + revisions: + - 03921aa8b29c + tool_panel_section_id: single_cell + tool_panel_section_label: Single-cell +- name: scanpy_plot_trajectory + owner: ebi-gxa + revisions: + - cb1992d1804b + tool_panel_section_id: single_cell + tool_panel_section_label: Single-cell - name: alevin owner: bgruening revisions: