diff --git a/cloud/assembly.yml b/cloud/assembly.yml
index ada06f50..dbc24e55 100644
--- a/cloud/assembly.yml
+++ b/cloud/assembly.yml
@@ -8,3 +8,5 @@ tools:
   owner: iuc
 - name: racon
   owner: bgruening
+- name: gfastats
+  owner: bgruening
diff --git a/cloud/assembly.yml.lock b/cloud/assembly.yml.lock
index d0e8f50c..20a131ad 100644
--- a/cloud/assembly.yml.lock
+++ b/cloud/assembly.yml.lock
@@ -7,6 +7,7 @@ tools:
   owner: iuc
   revisions:
   - 9e3e80cc4ad4
+  - e022dff952df
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: spades
@@ -19,11 +20,19 @@ tools:
   owner: iuc
   revisions:
   - 8dee0218ac7d
+  - b799a615995d
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
 - name: racon
   owner: bgruening
   revisions:
+  - 78c533842eeb
   - a199cd7ac344
   tool_panel_section_id: assembly
   tool_panel_section_label: Assembly
+- name: gfastats
+  owner: bgruening
+  revisions:
+  - 3ef480892a9f
+  tool_panel_section_id: assembly
+  tool_panel_section_label: Assembly
diff --git a/cloud/bed.yml.lock b/cloud/bed.yml.lock
index 8b9fd2da..cbd678ee 100644
--- a/cloud/bed.yml.lock
+++ b/cloud/bed.yml.lock
@@ -6,7 +6,8 @@ tools:
 - name: bedtools
   owner: iuc
   revisions:
-  - ce3c7f062223
   - 07e8b80f278c
+  - 64e2edfe7a2c
+  - ce3c7f062223
   tool_panel_section_id: bed
   tool_panel_section_label: BED
diff --git a/cloud/collection_operations.yml b/cloud/collection_operations.yml
index d96d205c..b70976e7 100644
--- a/cloud/collection_operations.yml
+++ b/cloud/collection_operations.yml
@@ -8,3 +8,5 @@ tools:
   owner: iuc
 - name: collection_column_join
   owner: iuc
+- name: pick_value
+  owner: iuc
diff --git a/cloud/collection_operations.yml.lock b/cloud/collection_operations.yml.lock
index e09fdcd8..6fed9d23 100644
--- a/cloud/collection_operations.yml.lock
+++ b/cloud/collection_operations.yml.lock
@@ -12,6 +12,7 @@ tools:
 - name: split_file_to_collection
   owner: bgruening
   revisions:
+  - 2dae863c8f42
   - 6cbe2f30c2d7
   tool_panel_section_id: collection_operations
   tool_panel_section_label: Collection Operations
@@ -25,6 +26,13 @@ tools:
   owner: iuc
   revisions:
   - 071084070619
+  - 3ddd99c7efee
   - 58228a4d58fe
   tool_panel_section_id: collection_operations
   tool_panel_section_label: Collection Operations
+- name: pick_value
+  owner: iuc
+  revisions:
+  - b19e21af9c52
+  tool_panel_section_id: collection_operations
+  tool_panel_section_label: Collection Operations
diff --git a/cloud/convert_formats.yml.lock b/cloud/convert_formats.yml.lock
index 5bd06e1b..ed96c9b4 100644
--- a/cloud/convert_formats.yml.lock
+++ b/cloud/convert_formats.yml.lock
@@ -7,4 +7,5 @@ tools:
   owner: iuc
   revisions:
   - b026dae67fba
+  tool_panel_section_id: convert_formats
   tool_panel_section_label: Convert Formats
diff --git a/cloud/datamash.yml.lock b/cloud/datamash.yml.lock
index 2a6310bf..5f1952a9 100644
--- a/cloud/datamash.yml.lock
+++ b/cloud/datamash.yml.lock
@@ -6,20 +6,23 @@ tools:
 - name: datamash_reverse
   owner: iuc
   revisions:
+  - b8a457820315
   - f198773344e4
   tool_panel_section_id: datamash
   tool_panel_section_label: Datamash
 - name: datamash_transpose
   owner: iuc
   revisions:
+  - 22c2a1ac7ae3
   - 374cb875d38a
+  - a513e3fbb4c5
   - ac092723240d
-  - 22c2a1ac7ae3
   tool_panel_section_id: datamash
   tool_panel_section_label: Datamash
 - name: datamash_ops
   owner: iuc
   revisions:
+  - 4c07ddedc198
   - 746e8e4bf929
   tool_panel_section_id: datamash
   tool_panel_section_label: Datamash
diff --git a/cloud/deeptools.yml.lock b/cloud/deeptools.yml.lock
index b73919ce..674ae406 100644
--- a/cloud/deeptools.yml.lock
+++ b/cloud/deeptools.yml.lock
@@ -7,17 +7,20 @@ tools:
   owner: bgruening
   revisions:
   - 514fa53b5efb
+  - a60c359ec43c
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_plot_heatmap
   owner: bgruening
   revisions:
   - a4dfb122e52b
+  - e4c7985d4585
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_bam_compare
   owner: bgruening
   revisions:
+  - c929a006727f
   - e821645ef8fc
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
@@ -25,17 +28,20 @@ tools:
   owner: bgruening
   revisions:
   - 62eb6d63f582
+  - c06951d10364
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_bigwig_compare
   owner: bgruening
   revisions:
+  - 07418a30ed01
   - 26e7304d6737
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_compute_gc_bias
   owner: bgruening
   revisions:
+  - 26983857c91a
   - 2bc10a9ca58b
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
@@ -43,17 +49,20 @@ tools:
   owner: bgruening
   revisions:
   - 2c37ce318bc3
+  - e479c7ca5570
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_multi_bam_summary
   owner: bgruening
   revisions:
+  - 01fb6a7654e6
   - 78f405266706
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_multi_bigwig_summary
   owner: bgruening
   revisions:
+  - 137c4beed34b
   - 3c9f0c486cca
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
@@ -61,17 +70,20 @@ tools:
   owner: bgruening
   revisions:
   - 32e451def88c
+  - bad3ca889618
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_plot_coverage
   owner: bgruening
   revisions:
+  - 231994413f89
   - 56bce3c82278
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_plot_enrichment
   owner: bgruening
   revisions:
+  - 4431f39ede55
   - e65d16fb2724
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
@@ -79,23 +91,27 @@ tools:
   owner: bgruening
   revisions:
   - 2da482e408b8
+  - 4ed32329e0ed
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_plot_pca
   owner: bgruening
   revisions:
+  - 443d9a9d6d11
   - 69264da0ce77
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_bam_coverage
   owner: bgruening
   revisions:
+  - 0e49b109abc2
   - bb1e4f63e0e6
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
 - name: deeptools_plot_profile
   owner: bgruening
   revisions:
+  - 6662b1a8d326
   - c361b12d207a
   tool_panel_section_id: deeptools
   tool_panel_section_label: deepTools
diff --git a/cloud/expressiontools.yml.lock b/cloud/expressiontools.yml.lock
index 55f84f4b..c41eb420 100644
--- a/cloud/expressiontools.yml.lock
+++ b/cloud/expressiontools.yml.lock
@@ -6,10 +6,13 @@ tools:
 - name: map_param_value
   owner: iuc
   revisions:
+  - 5ac8a4bf7a8d
   - a01f088d0e5e
+  tool_panel_section_id: expression_tools
   tool_panel_section_label: Expression Tools
 - name: compose_text_param
   owner: iuc
   revisions:
   - e188c9826e0f
+  tool_panel_section_id: expression_tools
   tool_panel_section_label: Expression Tools
diff --git a/cloud/fasta_fastq.yml.lock b/cloud/fasta_fastq.yml.lock
index f27cd622..dcef0652 100644
--- a/cloud/fasta_fastq.yml.lock
+++ b/cloud/fasta_fastq.yml.lock
@@ -8,8 +8,10 @@ tools:
   revisions:
   - 093678460093
   - 135b80fb1ac2
-  - c5e2e5902201
+  - 5eb7e84243f2
   - 660cffd8d92a
+  - aa784cb3810d
+  - c5e2e5902201
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: fastq_filter
@@ -51,6 +53,7 @@ tools:
 - name: flash
   owner: iuc
   revisions:
+  - 01a4ebf1f237
   - a27654fc4270
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
@@ -58,14 +61,15 @@ tools:
   owner: bgruening
   revisions:
   - 084bbd8ba7b8
+  - cd7e644cae1d
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: umi_tools_count
   owner: iuc
   revisions:
   - 8250ea3a1501
-  - b557acca0b56
   - a535cf1e5da4
+  - b557acca0b56
   tool_panel_section_id: fasta_fastq
   tool_panel_section_label: FASTA/FASTQ
 - name: umi_tools_extract
diff --git a/cloud/fastq_quality_control.yml.lock b/cloud/fastq_quality_control.yml.lock
index ee99a7bf..08e326da 100644
--- a/cloud/fastq_quality_control.yml.lock
+++ b/cloud/fastq_quality_control.yml.lock
@@ -6,27 +6,30 @@ tools:
 - name: multiqc
   owner: iuc
   revisions:
+  - 1c2db0054039
+  - 5e33b465d8d5
   - 75c93c70d094
   - 9a913cdee30e
-  - df99138d2776
   - abfd8a6544d7
-  - 5e33b465d8d5
-  - 1c2db0054039
+  - df99138d2776
+  - f7e2f1eb3a16
   tool_panel_section_id: fastq_quality_control
   tool_panel_section_label: FASTQ Quality Control
 - name: fastp
   owner: iuc
   revisions:
   - 65b93b623c77
+  - d60c3f704da0
   - dbf9c561ef29
   tool_panel_section_id: fastq_quality_control
   tool_panel_section_label: FASTQ Quality Control
 - name: fastqc
   owner: devteam
   revisions:
+  - 2c64fded1286
   - 3d0c7bdf12f5
-  - e7b2202befea
   - 9da02be9c6cc
+  - e7b2202befea
   tool_panel_section_id: fastq_quality_control
   tool_panel_section_label: FASTQ Quality Control
 - name: trimmomatic
diff --git a/cloud/gemini.yml.lock b/cloud/gemini.yml.lock
index efee7ba5..8d340131 100644
--- a/cloud/gemini.yml.lock
+++ b/cloud/gemini.yml.lock
@@ -8,16 +8,19 @@ tools:
   revisions:
   - 2270a8b83c12
   - cf61daf064fe
+  tool_panel_section_id: gemini
   tool_panel_section_label: GEMINI
 - name: gemini_db_info
   owner: iuc
   revisions:
-  - c2a413e47fe9
   - 4c5f4e9b1931
+  - c2a413e47fe9
+  tool_panel_section_id: gemini
   tool_panel_section_label: GEMINI
 - name: gemini_query
   owner: iuc
   revisions:
-  - 77a1e60fd1de
   - 666f60a9331a
+  - 77a1e60fd1de
+  tool_panel_section_id: gemini
   tool_panel_section_label: GEMINI
diff --git a/cloud/get_data.yml.lock b/cloud/get_data.yml.lock
index d406f524..4ef4cbb9 100644
--- a/cloud/get_data.yml.lock
+++ b/cloud/get_data.yml.lock
@@ -7,11 +7,13 @@ tools:
   owner: iuc
   revisions:
   - 83c7d564b128
+  - 8848455c0270
   tool_panel_section_id: get_data
   tool_panel_section_label: Get Data
 - name: ncbi_acc_download
   owner: iuc
   revisions:
   - 1c58de56d587
+  - e063168e0a81
   tool_panel_section_id: get_data
   tool_panel_section_label: Get Data
diff --git a/cloud/graph_display_data.yml.lock b/cloud/graph_display_data.yml.lock
index 9bb0af2a..0e251bf5 100644
--- a/cloud/graph_display_data.yml.lock
+++ b/cloud/graph_display_data.yml.lock
@@ -7,12 +7,14 @@ tools:
   owner: iuc
   revisions:
   - 2824d77cd8f8
+  - 36b848d5f3ec
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data
 - name: circos
   owner: iuc
   revisions:
   - df7356989ac1
+  - c4bde687c846
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data
 - name: jbrowse
@@ -27,6 +29,7 @@ tools:
   revisions:
   - 83c573f2e73c
   - 73b8cb5bddcd
+  - 2f557f6abbfb
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data
 - name: pathview
@@ -42,5 +45,6 @@ tools:
   - 53460afd5115
   - 566197475670
   - 4955e9bb96d1
+  - 374e9062d874
   tool_panel_section_id: graph_display_data
   tool_panel_section_label: Graph/Display Data
diff --git a/cloud/machine_learning.yml.lock b/cloud/machine_learning.yml.lock
index 3fb946e6..b66cd53a 100644
--- a/cloud/machine_learning.yml.lock
+++ b/cloud/machine_learning.yml.lock
@@ -1,4 +1,4 @@
-install_repository_dependencies: true
+install_repository_dependencies: false
 install_resolver_dependencies: false
 install_tool_dependencies: false
 tool_panel_section_label: Machine Learning
diff --git a/cloud/mapping.yml.lock b/cloud/mapping.yml.lock
index 3ba7e81e..4c14c202 100644
--- a/cloud/mapping.yml.lock
+++ b/cloud/mapping.yml.lock
@@ -6,6 +6,7 @@ tools:
 - name: minimap2
   owner: iuc
   revisions:
+  - 5cc34c3f440d
   - f54f5baedfdd
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping
@@ -13,39 +14,47 @@ tools:
   owner: devteam
   revisions:
   - 09b2cdb7ace5
+  - d5ceb9f3c25b
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping
 - name: bwa
   owner: devteam
   revisions:
-  - e188dc7a68e6
+  - 2477830927ec
   - 3fe632431b68
+  - e188dc7a68e6
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping
 - name: bwameth
   owner: iuc
   revisions:
   - 29bdbc353f20
+  - cf1322aeb137
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping
 - name: lastz
   owner: devteam
   revisions:
+  - 37b497aa133f
   - e7f19d6a9af8
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping
 - name: rgrnastar
   owner: iuc
   revisions:
-  - c772497b2c32
   - 2055c2667eb3
+  - 4014de1b6daf
   - 980d2a2e1180
+  - b0f2be869d6d
+  - c772497b2c32
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping
 - name: rna_starsolo
   owner: iuc
   revisions:
-  - eec9494fdafa
+  - 42ce70172b72
+  - 45795f582ae9
   - 79b885ce78d7
+  - eec9494fdafa
   tool_panel_section_id: mapping
   tool_panel_section_label: Mapping
diff --git a/cloud/multiple_alignments.yml.lock b/cloud/multiple_alignments.yml.lock
index 94182b7f..f7483291 100644
--- a/cloud/multiple_alignments.yml.lock
+++ b/cloud/multiple_alignments.yml.lock
@@ -7,23 +7,27 @@ tools:
   owner: iuc
   revisions:
   - 636b049e6141
+  - 7cd7a55a678d
   tool_panel_section_id: multiple_alignments
   tool_panel_section_label: Multiple Alignments
 - name: mummer_mummerplot
   owner: iuc
   revisions:
   - ebe3b0f84de9
+  - fb43e8887350
   tool_panel_section_id: multiple_alignments
   tool_panel_section_label: Multiple Alignments
 - name: mummer_show_coords
   owner: iuc
   revisions:
   - 959c1f8dae95
+  - cf3c9489c088
   tool_panel_section_id: multiple_alignments
   tool_panel_section_label: Multiple Alignments
 - name: mummer_dnadiff
   owner: iuc
   revisions:
+  - 5561a1193611
   - 60698466facd
   tool_panel_section_id: multiple_alignments
   tool_panel_section_label: Multiple Alignments
@@ -31,11 +35,13 @@ tools:
   owner: iuc
   revisions:
   - 48823c9635a4
+  - 57f042937ba7
   tool_panel_section_id: multiple_alignments
   tool_panel_section_label: Multiple Alignments
 - name: mummer_delta_filter
   owner: iuc
   revisions:
   - b3acbb3a6af0
+  - e8fdceffea4c
   tool_panel_section_id: multiple_alignments
   tool_panel_section_label: Multiple Alignments
diff --git a/cloud/nanopore.yml.lock b/cloud/nanopore.yml.lock
index 06b8dfb5..2ca1df31 100644
--- a/cloud/nanopore.yml.lock
+++ b/cloud/nanopore.yml.lock
@@ -7,11 +7,13 @@ tools:
   owner: iuc
   revisions:
   - 43815fa60f3a
+  - eb746fa6f514
   tool_panel_section_id: nanopore
   tool_panel_section_label: Nanopore
 - name: flye
   owner: bgruening
   revisions:
+  - 3e4f8642c77e
   - 3ee0ef312022
   tool_panel_section_id: nanopore
   tool_panel_section_label: Nanopore
@@ -19,23 +21,27 @@ tools:
   owner: iuc
   revisions:
   - a7228a7ea146
+  - fc8804320156
   tool_panel_section_id: nanopore
   tool_panel_section_label: Nanopore
 - name: medaka_variant_pipeline
   owner: iuc
   revisions:
+  - 1d62240feff3
   - 336b3def9b2b
   tool_panel_section_id: nanopore
   tool_panel_section_label: Nanopore
 - name: medaka_consensus
   owner: iuc
   revisions:
+  - 18505fe2bdb1
   - db25ec99c3ea
   tool_panel_section_id: nanopore
   tool_panel_section_label: Nanopore
 - name: nanoplot
   owner: iuc
   revisions:
+  - a38bdcec9e4c
   - edbb6c5028f5
   tool_panel_section_id: nanopore
   tool_panel_section_label: Nanopore
@@ -78,6 +84,7 @@ tools:
 - name: porechop
   owner: iuc
   revisions:
+  - 543cbeef3949
   - 93d623d9979c
   tool_panel_section_id: nanopore
   tool_panel_section_label: Nanopore
diff --git a/cloud/pharmacology.yml.lock b/cloud/pharmacology.yml.lock
index 57068cd1..5708f4b6 100644
--- a/cloud/pharmacology.yml.lock
+++ b/cloud/pharmacology.yml.lock
@@ -6,6 +6,7 @@ tools:
 - name: pharmcat
   owner: bgruening
   revisions:
+  - 891283e0ee89
   - d67642a21a1d
   tool_panel_section_id: pharmacology
   tool_panel_section_label: Pharmacology
diff --git a/cloud/picard.yml.lock b/cloud/picard.yml.lock
index 43de521c..920d02be 100644
--- a/cloud/picard.yml.lock
+++ b/cloud/picard.yml.lock
@@ -6,8 +6,9 @@ tools:
 - name: picard
   owner: devteam
   revisions:
-  - b502c227b5e6
+  - 3f254c5ced1d
   - a1f0b3f4b781
+  - b502c227b5e6
   - b9fbec5ac6b2
   tool_panel_section_id: picard
   tool_panel_section_label: Picard
diff --git a/cloud/qiime2.yml.lock b/cloud/qiime2.yml.lock
index 07ddd228..c8c3ecb2 100644
--- a/cloud/qiime2.yml.lock
+++ b/cloud/qiime2.yml.lock
@@ -1,4 +1,4 @@
-install_repository_dependencies: true
+install_repository_dependencies: false
 install_resolver_dependencies: false
 install_tool_dependencies: false
 tool_panel_section_label: QIIME2
@@ -7,4 +7,5 @@ tools:
   owner: q2d2
   revisions:
   - 3f011fac899d
-  tool_panel_section_label: QIIME2
\ No newline at end of file
+  tool_panel_section_id: qiime2
+  tool_panel_section_label: QIIME2
diff --git a/cloud/rna_seq.yml b/cloud/rna_seq.yml
index 07a71a81..0035acc7 100644
--- a/cloud/rna_seq.yml
+++ b/cloud/rna_seq.yml
@@ -30,3 +30,5 @@ tools:
   owner: iuc
 - name: fgsea
   owner: iuc
+- name: brew3r_r
+  owner: iuc
diff --git a/cloud/rna_seq.yml.lock b/cloud/rna_seq.yml.lock
index ff854f22..385b576b 100644
--- a/cloud/rna_seq.yml.lock
+++ b/cloud/rna_seq.yml.lock
@@ -7,40 +7,46 @@ tools:
   owner: bgruening
   revisions:
   - cc05793bb896
+  - f4d5237a84f6
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: kallisto_pseudo
   owner: iuc
   revisions:
   - 5ae5c312d718
+  - ce5d418183c5
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: kallisto_quant
   owner: iuc
   revisions:
+  - 4f9c4e6566e5
   - 60f888039fb2
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: deseq2
   owner: iuc
   revisions:
+  - 6a3a025714d3
   - 8fe98f7094de
+  - 9a882d108833
   - cd9874cb9019
-  - 6a3a025714d3
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: limma_voom
   owner: iuc
   revisions:
   - 0921444c832d
-  - d6f5fa4ee473
+  - 119b069fc845
   - d5a940112511
+  - d6f5fa4ee473
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: edger
   owner: iuc
   revisions:
   - 334ce9b1bac5
+  - ae2aad0a6d50
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: sailfish
@@ -53,22 +59,24 @@ tools:
   owner: iuc
   revisions:
   - 26371a1df031
-  - f4af63aaf57a
   - 61ee47027bd3
+  - f4af63aaf57a
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: stringtie
   owner: iuc
   revisions:
   - 1ebd14235b92
+  - cbf488da3b2c
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: featurecounts
   owner: iuc
   revisions:
+  - 1759d845181e
   - 38b6d12edc68
   - f3a5f075498f
-  - 1759d845181e
+  - f9d49f5cb597
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
 - name: cufflinks
@@ -102,3 +110,9 @@ tools:
   - 17eb1e0d711f
   tool_panel_section_id: rna_seq
   tool_panel_section_label: RNA-seq
+- name: brew3r_r
+  owner: iuc
+  revisions:
+  - 05f8e9d1e8b8
+  tool_panel_section_id: rna_seq
+  tool_panel_section_label: RNA-seq
diff --git a/cloud/sam_bam.yml.lock b/cloud/sam_bam.yml.lock
index 2a0a9941..f4c81653 100644
--- a/cloud/sam_bam.yml.lock
+++ b/cloud/sam_bam.yml.lock
@@ -13,20 +13,24 @@ tools:
   owner: iuc
   revisions:
   - 19ece8afbaab
+  - 30a201c9c310
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_view
   owner: iuc
   revisions:
-  - 5826298f6a73
   - 0dbf49c414ae
+  - 32dc5f781059
+  - 5826298f6a73
   - b72793637686
+  - c370440f901e
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_reheader
   owner: devteam
   revisions:
   - 30388d878f81
+  - 85e38b31e8b3
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: sam_pileup
@@ -39,12 +43,14 @@ tools:
   owner: devteam
   revisions:
   - 4d343c1f606b
+  - 970e6333f07e
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: bamtools_split
   owner: devteam
   revisions:
   - 9676127a1ed2
+  - 96c9315b0e29
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: sam2interval
@@ -56,26 +62,29 @@ tools:
 - name: qualimap_multi_bamqc
   owner: iuc
   revisions:
+  - 17b35d23731f
   - e38af83df163
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_phase
   owner: devteam
   revisions:
-  - b5c3b1856370
   - 1e5880498f52
+  - b5c3b1856370
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_merge
   owner: iuc
   revisions:
-  - 740ce0a18f0d
   - 36677f429310
+  - 740ce0a18f0d
+  - cae2794d2deb
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_markdup
   owner: iuc
   revisions:
+  - 40fa6c240105
   - 83b8e36e9cbe
   - b5527cc104ab
   tool_panel_section_id: sam_bam
@@ -84,18 +93,21 @@ tools:
   owner: iuc
   revisions:
   - bc0cc7bfbfe9
+  - d2df79922531
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_fastx
   owner: iuc
   revisions:
   - a8d69aee190e
+  - b906586a6596
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_depth
   owner: iuc
   revisions:
   - 44de678a44c4
+  - 971dc85e9441
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_stats
@@ -103,17 +115,20 @@ tools:
   revisions:
   - 145f6d74ff5e
   - 24c5d43cb545
+  - 541082d03bef
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_split
   owner: devteam
   revisions:
   - 135c85f4cfaf
+  - 818030fa6bbf
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_bedcov
   owner: devteam
   revisions:
+  - 6856f8a01905
   - 9149ad20699a
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
@@ -121,6 +136,7 @@ tools:
   owner: devteam
   revisions:
   - 06dc50b7b711
+  - 26b4f9f98aca
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_idxstats
@@ -129,6 +145,7 @@ tools:
   - 7a6034296ae9
   - 7def34e6cf4d
   - 811fc2d75ad4
+  - fa5d3e61e429
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtool_filter2
@@ -141,37 +158,43 @@ tools:
   owner: devteam
   revisions:
   - 22970df7a40e
+  - fefd89ab563c
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_sort
   owner: devteam
   revisions:
+  - d54a4df48867
   - e613c1ad4c4c
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_mpileup
   owner: devteam
   revisions:
+  - b61f5d6a7f25
   - fa7ad9b89f4a
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: bam_to_sam
   owner: devteam
   revisions:
+  - 3c661e57a88f
   - 88eedb4abea0
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: bamtools_filter
   owner: devteam
   revisions:
-  - cb20f99fd45b
-  - bd735cae4ce6
   - 108db6635177
+  - 993b19f20c76
+  - bd735cae4ce6
+  - cb20f99fd45b
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: sam_to_bam
   owner: devteam
   revisions:
+  - 0e60e2dd20af
   - cf1ffd88f895
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
@@ -179,6 +202,7 @@ tools:
   owner: devteam
   revisions:
   - a4a10c7924d1
+  - b8beef827165
   tool_panel_section_id: sam_bam
   tool_panel_section_label: SAM/BAM
 - name: samtools_rmdup
diff --git a/cloud/single_cell.yml b/cloud/single_cell.yml
index 11f96bfa..aceeb409 100644
--- a/cloud/single_cell.yml
+++ b/cloud/single_cell.yml
@@ -167,3 +167,6 @@ tools:
 
   - name: scanpy_plot_embed
     owner: ebi-gxa
+
+  - name: cite_seq_count
+    owner: iuc
diff --git a/cloud/single_cell.yml.lock b/cloud/single_cell.yml.lock
index 9c72c162..a53e2df6 100644
--- a/cloud/single_cell.yml.lock
+++ b/cloud/single_cell.yml.lock
@@ -45,34 +45,39 @@ tools:
   owner: iuc
   revisions:
   - 55e35e9203cf
+  - 93dd15e13e6a
   - fb9e030ffae4
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: anndata_export
   owner: iuc
   revisions:
-  - 707023fa62fe
   - 0cb889db0910
+  - 707023fa62fe
+  - e1c3c2f2a834
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: anndata_manipulate
   owner: iuc
   revisions:
-  - 9bd945a03d7b
   - 3d748954434b
+  - 9bd945a03d7b
+  - ed4996a16f7f
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: chromeister
   owner: iuc
   revisions:
+  - b768cc4cca40
   - e483be1014b6
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: anndata_inspect
   owner: iuc
   revisions:
-  - 688357ad5e61
   - 286a24ac079c
+  - 688357ad5e61
+  - 6f0d0c784f09
   - ee98d611afc6
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
@@ -80,13 +85,14 @@ tools:
   owner: iuc
   revisions:
   - 05631436cdf1
+  - e98619de2776
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: dropletutils
   owner: iuc
   revisions:
-  - a9caad671439
   - 2c1200fba922
+  - a9caad671439
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: dropletutils_read_10x
@@ -112,18 +118,21 @@ tools:
   revisions:
   - 2b0d3e2f402a
   - 41f34e925bd5
+  - f3eb2291da05
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: raceid_filtnormconf
   owner: iuc
   revisions:
-  - c891d8b33ede
   - 43c146e25a43
+  - b83fbc90161e
+  - c891d8b33ede
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: raceid_clustering
   owner: iuc
   revisions:
+  - 0bff0ee0683a
   - a4b734cd253b
   - f911a64454fb
   tool_panel_section_id: single_cell
@@ -131,6 +140,7 @@ tools:
 - name: raceid_trajectory
   owner: iuc
   revisions:
+  - 2af7c5086a96
   - 72979cac22b2
   - c92d0f9338c5
   tool_panel_section_id: single_cell
@@ -138,6 +148,7 @@ tools:
 - name: raceid_inspecttrajectory
   owner: iuc
   revisions:
+  - a6821f856a1e
   - c8434a623268
   - df8e4e54d367
   tool_panel_section_id: single_cell
@@ -146,6 +157,7 @@ tools:
   owner: bgruening
   revisions:
   - 04b494623f8e
+  - c9944a2600f1
   - e4c01dcece8b
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
@@ -153,6 +165,7 @@ tools:
   owner: bgruening
   revisions:
   - 88c07fc4024c
+  - a896b8b7d264
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: slice_image
@@ -211,42 +224,49 @@ tools:
   owner: iuc
   revisions:
   - aaa5da8e73a9
+  - f9353ee6a0d4
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_filter
   owner: iuc
   revisions:
+  - 72a6bebab2a5
   - b409c2486353
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_inspect
   owner: iuc
   revisions:
+  - c0a80a16560f
   - c5d3684f7c4c
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_normalize
   owner: iuc
   revisions:
+  - 9f354c7c8c92
   - ab55fe8030b6
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_plot
   owner: iuc
   revisions:
-  - aa0c474463c2
+  - 1072ce66b426
   - a8f865950ac4
+  - aa0c474463c2
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_remove_confounders
   owner: iuc
   revisions:
+  - a39040ae0a38
   - bf2017df9837
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_read_10x
   owner: ebi-gxa
   revisions:
+  - 078aa23c9374
   - c8391a25dee3
   - d92e6f12b790
   tool_panel_section_id: single_cell
@@ -254,6 +274,7 @@ tools:
 - name: gtf2gene_list
   owner: ebi-gxa
   revisions:
+  - 14b3f2a4523b
   - 1a642de6db01
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
@@ -275,6 +296,7 @@ tools:
   revisions:
   - 54f1212d26ac
   - 6aa025ea64d3
+  - a4774b7b2e85
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: retrieve_scxa
@@ -287,6 +309,7 @@ tools:
   owner: ebi-gxa
   revisions:
   - 0387a2179f88
+  - 73d43034c860
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_filter_cells
@@ -294,6 +317,7 @@ tools:
   revisions:
   - 4c42e5d8cb7c
   - ba64b91ed2b9
+  - bf1e0bdec1db
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_filter_genes
@@ -301,11 +325,13 @@ tools:
   revisions:
   - 7857ea93a011
   - a1698b43abeb
+  - cc64914b0cf4
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_normalise_data
   owner: ebi-gxa
   revisions:
+  - 3027cb62adbd
   - 439f7f939d46
   - 463d4fa8f5ec
   tool_panel_section_id: single_cell
@@ -315,11 +341,13 @@ tools:
   revisions:
   - 0edb75c411a4
   - 5c62f39aab8f
+  - 64dd8bb151e1
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_scale_data
   owner: ebi-gxa
   revisions:
+  - 4cc9362782b4
   - 9664a6c00fd1
   - c6e52529260e
   tool_panel_section_id: single_cell
@@ -327,6 +355,7 @@ tools:
 - name: scanpy_run_pca
   owner: ebi-gxa
   revisions:
+  - 4428dba93375
   - 988edd5fa902
   - ce93e630b55a
   tool_panel_section_id: single_cell
@@ -334,6 +363,7 @@ tools:
 - name: scanpy_compute_graph
   owner: ebi-gxa
   revisions:
+  - 22bd5861706d
   - 2401808e20e8
   - a58d4166805b
   tool_panel_section_id: single_cell
@@ -343,6 +373,7 @@ tools:
   revisions:
   - 384cacc40611
   - 8eff7ec034e3
+  - abdb61e4afa3
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_run_umap
@@ -350,18 +381,21 @@ tools:
   revisions:
   - 0f98603d0116
   - abae3d11d920
+  - ea91cfd0444e
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_find_cluster
   owner: ebi-gxa
   revisions:
   - 35caf3c27c91
+  - 36735850e461
   - 9e4f79e40b84
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
 - name: scanpy_find_markers
   owner: ebi-gxa
   revisions:
+  - d8f5224005bb
   - eb01a7e59e9a
   - f04dd4e5b6a7
   tool_panel_section_id: single_cell
@@ -369,7 +403,14 @@ tools:
 - name: scanpy_plot_embed
   owner: ebi-gxa
   revisions:
+  - 7d5c97823f8b
   - 99dd7baf9e23
   - a8ef4bc35839
   tool_panel_section_id: single_cell
   tool_panel_section_label: Single-cell
+- name: cite_seq_count
+  owner: iuc
+  revisions:
+  - 3df3d1b51110
+  tool_panel_section_label: single_cell
+  tool_panel_section_label: Single-cell
diff --git a/cloud/text_manipulation.yml.lock b/cloud/text_manipulation.yml.lock
index 4965bf71..6e062e29 100644
--- a/cloud/text_manipulation.yml.lock
+++ b/cloud/text_manipulation.yml.lock
@@ -7,34 +7,39 @@ tools:
   owner: iuc
   revisions:
   - 6544e4b87a4f
+  - 90f657745fea
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: query_tabular
   owner: iuc
   revisions:
   - cf34c344508d
+  - cf4397560712
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: column_maker
   owner: devteam
   revisions:
-  - 6595517c2dd8
   - 02026300aa45
+  - 6595517c2dd8
+  - aff5135563c6
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: sqlite_to_tabular
   owner: iuc
   revisions:
   - bce29ec10b78
+  - c4d18aa4ec4a
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: annotatemyids
   owner: iuc
   revisions:
   - 133f36c29579
+  - 1a125daea0d8
   - 44018dd6b447
+  - a79ee60b6926
   - fe3ca740a485
-  - 1a125daea0d8
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: concatenate_multiple_datasets
@@ -46,6 +51,7 @@ tools:
 - name: regex_find_replace
   owner: galaxyp
   revisions:
+  - 503bcd6ebe4b
   - ae8c4b2488e7
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
@@ -60,6 +66,7 @@ tools:
   owner: bgruening
   revisions:
   - 37a53100b67e
+  - ff2a81aa3f08
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: add_input_name_as_column
@@ -71,10 +78,12 @@ tools:
 - name: text_processing
   owner: bgruening
   revisions:
+  - 74a8bef53a00
+  - 86755160afbf
+  - 9ff72e942410
   - d698c222f354
   - ddf54b12c295
-  - 9ff72e942410
-  - 74a8bef53a00
+  - fbf99087e067
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: reshape2_melt
@@ -99,11 +108,13 @@ tools:
   owner: iuc
   revisions:
   - 238981ed43b7
+  - f7ad5e69aa60
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
 - name: column_remove_by_header
   owner: iuc
   revisions:
+  - 2040e4c2750a
   - 372967836e98
   tool_panel_section_id: text_manipulation
   tool_panel_section_label: Text Manipulation
diff --git a/cloud/variant_calling.yml.lock b/cloud/variant_calling.yml.lock
index 9e7bd2eb..83175a2f 100644
--- a/cloud/variant_calling.yml.lock
+++ b/cloud/variant_calling.yml.lock
@@ -14,8 +14,8 @@ tools:
   owner: iuc
   revisions:
   - 4805fe3d8fda
-  - e1461b5c52a0
   - 65432c3abf6c
+  - e1461b5c52a0
   tool_panel_section_id: variant_calling
   tool_panel_section_label: Variant Calling
 - name: lofreq_viterbi
@@ -28,6 +28,7 @@ tools:
   owner: iuc
   revisions:
   - 426d707dfc47
+  - 971e07ca4456
   tool_panel_section_id: variant_calling
   tool_panel_section_label: Variant Calling
 - name: lofreq_filter
@@ -40,14 +41,15 @@ tools:
   owner: iuc
   revisions:
   - 09d6e4693887
+  - 791f73caa0c8
   tool_panel_section_id: variant_calling
   tool_panel_section_label: Variant Calling
 - name: freebayes
   owner: devteam
   revisions:
+  - 156b60c1530f
   - a5937157062f
   - ef2c525bd8cd
-  - 156b60c1530f
   tool_panel_section_id: variant_calling
   tool_panel_section_label: Variant Calling
 - name: snpsift_genesets
@@ -66,15 +68,17 @@ tools:
   owner: iuc
   revisions:
   - 5b80f544c67f
+  - 68693743661e
   - 74aebe30fb52
+  - 9473cd297a76
   - cfcf33df7fc0
-  - 68693743661e
   tool_panel_section_id: variant_calling
   tool_panel_section_label: Variant Calling
 - name: snpsift
   owner: iuc
   revisions:
   - 2e497a770bca
+  - 5fab4f81391d
   tool_panel_section_id: variant_calling
   tool_panel_section_label: Variant Calling
 - name: sniffles
diff --git a/cloud/vcf_bcf.yml.lock b/cloud/vcf_bcf.yml.lock
index eb159bac..a6ec035f 100644
--- a/cloud/vcf_bcf.yml.lock
+++ b/cloud/vcf_bcf.yml.lock
@@ -6,6 +6,7 @@ tools:
 - name: bcftools_consensus
   owner: iuc
   revisions:
+  - 8aa352093d73
   - d6dc477167f8
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
@@ -13,35 +14,41 @@ tools:
   owner: iuc
   revisions:
   - 672b6c02fbc7
+  - 7b4454382d39
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_fixploidy
   owner: iuc
   revisions:
   - '365325116147'
+  - dd72ff87cfd0
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_convert_to_vcf
   owner: iuc
   revisions:
+  - cfd81f17580b
   - fec517907949
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_norm
   owner: iuc
   revisions:
+  - 271965b55437
   - c077f71d351f
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_query_list_samples
   owner: iuc
   revisions:
+  - 2c80b0d6bde0
   - ed4ea9de1791
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_missing2ref
   owner: iuc
   revisions:
+  - 8b260d252ff4
   - dfef7a353ed0
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
@@ -49,41 +56,48 @@ tools:
   owner: iuc
   revisions:
   - 01d6b7d6365e
+  - ccb83bf54de0
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_setgt
   owner: iuc
   revisions:
   - 8abfcd1a6949
+  - a730269af659
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_counts
   owner: iuc
   revisions:
   - 4813f99d81b7
+  - dadbd61dc4cf
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_mpileup
   owner: iuc
   revisions:
+  - 0a5dcc9a8ec2
   - 0dbff46d5a1b
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_mendelian
   owner: iuc
   revisions:
+  - 8f5962c43868
   - bf235558f2cf
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_concat
   owner: iuc
   revisions:
+  - 05f317e50e61
   - d40d4bf05718
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_convert_from_vcf
   owner: iuc
   revisions:
+  - 012656fd329f
   - b8e9da766b0f
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
@@ -91,17 +105,20 @@ tools:
   owner: iuc
   revisions:
   - 776ad0b21536
+  - bc5332d47b1c
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_reheader
   owner: iuc
   revisions:
+  - 2331ddcbd5aa
   - 9ef52d95114b
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_stats
   owner: iuc
   revisions:
+  - 591cc8518033
   - b17394940c7a
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
@@ -109,11 +126,13 @@ tools:
   owner: iuc
   revisions:
   - 582f8b13873d
+  - a12844ca467a
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_fill_tags
   owner: iuc
   revisions:
+  - b10d1510fa84
   - bf7d6acd9884
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
@@ -121,11 +140,13 @@ tools:
   owner: iuc
   revisions:
   - 02f349bdbf96
+  - 39bca000353d
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_merge
   owner: iuc
   revisions:
+  - 5b006286a458
   - e03f2f3ac3a9
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
@@ -133,53 +154,62 @@ tools:
   owner: iuc
   revisions:
   - b76adb2f1c51
+  - fa65af07ce7d
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_call
   owner: iuc
   revisions:
   - 072f606e2e69
+  - 07396b423218
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_view
   owner: iuc
   revisions:
+  - 1a2ef636f48e
   - 23680a42e149
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_filter
   owner: iuc
   revisions:
+  - 46fcafba49ec
   - 6ca7c55a27e8
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_csq
   owner: iuc
   revisions:
+  - d237eaef451f
   - fdd127bd4a32
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_annotate
   owner: iuc
   revisions:
+  - 2c372041ed8c
   - 403553ae19f6
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_dosage
   owner: iuc
   revisions:
+  - 283911fe7e1a
   - 5c232a738c74
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_query
   owner: iuc
   revisions:
+  - 31a1b89eab9b
   - c9c5718edc19
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: bcftools_plugin_tag2tag
   owner: iuc
   revisions:
+  - 3897eaadfbff
   - bdfdf5f6e950
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
@@ -230,6 +260,7 @@ tools:
   owner: devteam
   revisions:
   - 2968c6916579
+  - aa8e8c96ca06
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
 - name: vcfcombine
@@ -295,6 +326,7 @@ tools:
 - name: vcfsort
   owner: devteam
   revisions:
+  - dd44c3f416c3
   - f0580efedada
   tool_panel_section_id: vcf_bcf
   tool_panel_section_label: VCF/BCF
diff --git a/cloud/virology.yml.lock b/cloud/virology.yml.lock
index 100ab31c..4c1b77f4 100644
--- a/cloud/virology.yml.lock
+++ b/cloud/virology.yml.lock
@@ -6,12 +6,14 @@ tools:
 - name: ivar_trim
   owner: iuc
   revisions:
+  - a250929be21b
   - db536ad45f28
   tool_panel_section_id: virology
   tool_panel_section_label: Virology
 - name: ivar_removereads
   owner: iuc
   revisions:
+  - 5dc33613c288
   - ee2beb764a7b
   tool_panel_section_id: virology
   tool_panel_section_label: Virology
@@ -24,6 +26,7 @@ tools:
 - name: ivar_consensus
   owner: iuc
   revisions:
+  - 3a72fede57ce
   - 78bbd17d0703
   tool_panel_section_id: virology
   tool_panel_section_label: Virology
@@ -31,6 +34,7 @@ tools:
   owner: iuc
   revisions:
   - 7fe36019c073
+  - fcbeda41d0ac
   tool_panel_section_id: virology
   tool_panel_section_label: Virology
 - name: ivar_getmasked
@@ -42,6 +46,7 @@ tools:
 - name: ivar_variants
   owner: iuc
   revisions:
+  - abbc8041e8ec
   - f95f403841ad
   tool_panel_section_id: virology
   tool_panel_section_label: Virology