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Describe the bug
For histories with the 'training' tag, uploading a file from a url fails with the following error:
Traceback (most recent call last):
File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/tools/data_fetch.py", line 17, in <module>
import bdbag.bdbag_api
ModuleNotFoundError: No module named 'bdbag'
I've shared the history here https://usegalaxy.org/u/cat-bro/h/datafetch-history. The first upload succeeds and the second fails because training tag has been added. I can't think of any other variables that could be affecting it.
The text was updated successfully, but these errors were encountered:
cat-bro
changed the title
On usegalaxy.org, if a history has a 'training' tag, data fetch fails
On usegalaxy.org, some tools fail if a history has a 'training' tag
Jun 18, 2022
Reopening this issue because there is another tool "UCSC Main table browser" failing with the training tag on the history, working otherwise.
tool id: ucsc_table_direct1
stderr:
Traceback (most recent call last):
File "/cvmfs/main.galaxyproject.org/galaxy/tools/data_source/data_source.py", line 16, in <module>
from galaxy.datatypes import sniff
File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/datatypes/sniff.py", line 25, in <module>
from typing_extensions import Protocol
ModuleNotFoundError: No module named 'typing_extensions'
Describe the bug
For histories with the 'training' tag, uploading a file from a url fails with the following error:
I've shared the history here https://usegalaxy.org/u/cat-bro/h/datafetch-history. The first upload succeeds and the second fails because training tag has been added. I can't think of any other variables that could be affecting it.
The text was updated successfully, but these errors were encountered: