From 4fecd36cee0509e87cc1da2a90c4309f9828babf Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?B=C3=A9r=C3=A9nice=20Batut?= <berenice.batut@gmail.com>
Date: Wed, 6 Nov 2024 11:57:11 +0100
Subject: [PATCH] Add test conditional for format script

---
 .github/workflows/run_tests.yaml |  2 +-
 sources/bin/format_tools.sh      | 34 ++++++++++++++++++++++----------
 2 files changed, 25 insertions(+), 11 deletions(-)

diff --git a/.github/workflows/run_tests.yaml b/.github/workflows/run_tests.yaml
index 38d40e0a..012bea3b 100644
--- a/.github/workflows/run_tests.yaml
+++ b/.github/workflows/run_tests.yaml
@@ -64,7 +64,7 @@ jobs:
           bash sources/bin/get_community_tools.sh test
       - name: Create interactive table and wordcloud
         run: | 
-          bash sources/bin/format_tools.sh
+          bash sources/bin/format_tools.sh test
 
   test-tutorials:
     runs-on: ubuntu-20.04
diff --git a/sources/bin/format_tools.sh b/sources/bin/format_tools.sh
index 04c88095..ecf25c2a 100755
--- a/sources/bin/format_tools.sh
+++ b/sources/bin/format_tools.sh
@@ -1,13 +1,27 @@
 #!/usr/bin/env bash
 
-python sources/bin/create_interactive_table.py \
-        --input "communities/all/resources/tools.tsv" \
-        --template "sources/data/interactive_table_template.html" \
-        --output "communities/all/resources/tools.html"
+if [[ ! -z $1  && $1 == "test" ]]; then
+        python sources/bin/create_interactive_table.py \
+                --input "communities/all/resources/test_tools.tsv" \
+                --template "sources/data/interactive_table_template.html" \
+                --output "communities/all/resources/tools.html"
 
-python sources/bin/create_wordcloud.py \
-        --input "communities/all/resources/tools.tsv" \
-        --name-col "Galaxy wrapper id" \
-        --stat-col "No. of tool users (5 years) - all main servers" \
-        --wordcloud_mask "sources/data/usage_stats/wordcloud_mask.png" \
-        --output "communities/all/resources/tools_wordcloud.png" \
\ No newline at end of file
+        python sources/bin/create_wordcloud.py \
+                --input "communities/all/resources/test_tools.tsv" \
+                --name-col "Galaxy wrapper id" \
+                --stat-col "No. of tool users (5 years) - all main servers" \
+                --wordcloud_mask "sources/data/usage_stats/wordcloud_mask.png" \
+                --output "communities/all/resources/tools_wordcloud.png"
+else
+        python sources/bin/create_interactive_table.py \
+                --input "communities/all/resources/tools.tsv" \
+                --template "sources/data/interactive_table_template.html" \
+                --output "communities/all/resources/tools.html"
+
+        python sources/bin/create_wordcloud.py \
+                --input "communities/all/resources/tools.tsv" \
+                --name-col "Galaxy wrapper id" \
+                --stat-col "No. of tool users (5 years) - all main servers" \
+                --wordcloud_mask "sources/data/usage_stats/wordcloud_mask.png" \
+                --output "communities/all/resources/tools_wordcloud.png"
+fi;
\ No newline at end of file