diff --git a/lib/galaxy/config/sample/datatypes_conf.xml.sample b/lib/galaxy/config/sample/datatypes_conf.xml.sample index 1ecd25ee5761..86ad796485c9 100644 --- a/lib/galaxy/config/sample/datatypes_conf.xml.sample +++ b/lib/galaxy/config/sample/datatypes_conf.xml.sample @@ -239,7 +239,9 @@ - + + + diff --git a/lib/galaxy/datatypes/display_applications/configs/image/avivator.xml b/lib/galaxy/datatypes/display_applications/configs/image/avivator.xml index b1c54b8a89d3..4d731b4f9bfa 100644 --- a/lib/galaxy/datatypes/display_applications/configs/image/avivator.xml +++ b/lib/galaxy/datatypes/display_applications/configs/image/avivator.xml @@ -1,7 +1,7 @@ http://avivator.gehlenborglab.org/?image_url=${qp($tiff_file.url)} - + diff --git a/lib/galaxy/datatypes/images.py b/lib/galaxy/datatypes/images.py index 3420b1be183a..e61efeaca05a 100644 --- a/lib/galaxy/datatypes/images.py +++ b/lib/galaxy/datatypes/images.py @@ -91,10 +91,6 @@ class Png(Image): class Tiff(Image): edam_format = "format_3591" file_ext = "tiff" - - -class OMETiff(Tiff): - file_ext = "ome.tiff" MetadataElement( name="offsets", desc="Offsets File", @@ -120,6 +116,10 @@ def set_meta( json.dump(offsets, f) dataset.metadata.offsets = offsets_file + +class OMETiff(Tiff): + file_ext = "ome.tiff" + def sniff(self, filename: str) -> bool: with tifffile.TiffFile(filename) as tif: if tif.is_ome: