.command-engine.yml

project_name: chakin
strict: true
module:
    base_module: chado
    instance_cls: "<class 'chado.ChadoInstance'>"
    instance_func: ChadoInstance
    instance_args: []
    instance_kwargs:
        dbhost: "localhost"
        dbuser: "postgres"
        dbpass: "postgres"
        dbname: "postgres"
        dbschema: "public"
        dbport: 5432

    ignore:
        top_attrs:
            - 'session'
            - 'dbname'
            - 'dbhost'
            - 'dbport'
            - 'dbuser'
            - 'dbpass'
            - 'dburl'
            - 'dbschema'
            - 'get_cvterm_id'
            - 'get_cvterm_name'
            - 'create_cvterm'
            - 'get_pub_id'
            - 'model'
        funcs:
            - get
            - post

documentation: |
    Chakin is a set of wrappers for accessing Chado. Each utility is implemented as
    a subcommand of ``chakin``. This section of the documentation
    describes these commands.

docs_import:
    - sqlalchemy

docs_reset_hook: |
    sqlalchemy.orm.clear_mappers()