From e69042c383385386f23dc5ea0d2c57e1137687cd Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Thu, 26 May 2022 11:14:45 +0200
Subject: [PATCH 01/20] v2.0 (wip)
---
.coveragerc | 2 -
.gitignore | 2 +
.npmignore | 2 +-
.travis.yml | 74 -
MANIFEST.in | 32 +-
README.md | 32 +-
HOWTO.md => RELEASE.md | 0
appveyor.yml | 62 -
binder/Dockerfile | 2 +-
codecov.yml | 12 -
css/widget.css | 13 +
environment-dev.yml | 17 +
install.json | 5 +
package-lock.json | 20258 ++++++++++++++------
package.json | 101 +-
pgljupyter/__init__.py | 18 +-
pgljupyter/_frontend.py | 2 +-
pgljupyter/_version.py | 2 +-
pgljupyter/editors.py | 258 +-
pgljupyter/magics.py | 56 +-
pgljupyter/tests/__init__.py | 0
pgljupyter/tests/conftest.py | 48 -
pgljupyter/tests/test_example.py | 8 -
pgljupyter/tests/test_nbextension_path.py | 8 -
pgljupyter/widgets.py | 6 +-
pyproject.toml | 17 +
pytest.ini | 4 -
readthedocs.yml | 9 -
setup.cfg | 8 +-
setup.py | 158 +-
setupbase.py | 718 -
src/index.ts | 1 +
src/labplugin.ts | 3 +-
src/pgljs/plantgl | 2 +-
src/widgets/controls.ts | 15 +-
src/widgets/editors.ts | 51 +-
src/widgets/widgets.ts | 2 +-
tests/karma.conf.js | 41 -
tests/src/index.spec.ts | 32 -
tests/src/utils.spec.ts | 110 -
tests/tsconfig.json | 12 -
tsconfig.json | 13 +-
webpack.config.js | 15 +-
43 files changed, 14820 insertions(+), 7411 deletions(-)
delete mode 100644 .coveragerc
delete mode 100644 .travis.yml
rename HOWTO.md => RELEASE.md (100%)
delete mode 100644 appveyor.yml
delete mode 100644 codecov.yml
create mode 100644 environment-dev.yml
create mode 100644 install.json
delete mode 100644 pgljupyter/tests/__init__.py
delete mode 100644 pgljupyter/tests/conftest.py
delete mode 100644 pgljupyter/tests/test_example.py
delete mode 100644 pgljupyter/tests/test_nbextension_path.py
create mode 100644 pyproject.toml
delete mode 100644 pytest.ini
delete mode 100644 readthedocs.yml
delete mode 100644 setupbase.py
delete mode 100644 tests/karma.conf.js
delete mode 100644 tests/src/index.spec.ts
delete mode 100644 tests/src/utils.spec.ts
delete mode 100644 tests/tsconfig.json
diff --git a/.coveragerc b/.coveragerc
deleted file mode 100644
index e8fc942..0000000
--- a/.coveragerc
+++ /dev/null
@@ -1,2 +0,0 @@
-[run]
-omit = pgljupyter/tests/*
diff --git a/.gitignore b/.gitignore
index 07b2f72..b69fa42 100644
--- a/.gitignore
+++ b/.gitignore
@@ -158,3 +158,5 @@ pgljupyter/labextension/*.tgz
pgljupyter/labextension
.vscode
+
+examples/test
diff --git a/.npmignore b/.npmignore
index 12b5769..fa1b917 100644
--- a/.npmignore
+++ b/.npmignore
@@ -1,10 +1,10 @@
.DS_Store
node_modules/
tests/
-.jshintrc
# Ignore any build output from python:
dist/*.tar.gz
dist/*.wheel
examples
src/pgljs/plantgl
src/pgljs/build
+src/pgljs/dist
diff --git a/.travis.yml b/.travis.yml
deleted file mode 100644
index f075266..0000000
--- a/.travis.yml
+++ /dev/null
@@ -1,74 +0,0 @@
-language: python
-python:
- - 3.7
- - 3.6
- - 3.5
-sudo: false
-dist: xenial
-services:
- - xvfb
-addons:
- apt_packages:
- - pandoc
-env:
- matrix:
- - GROUP=python
-matrix:
- include:
- - python: 3.5
- env: GROUP=js
- include:
- - python: 3.6
- env: GROUP=docs
-cache:
- pip: true
- directories:
- - node_modules # NPM packages
- - $HOME/.npm
-before_install:
- - pip install -U pip setuptools
- - nvm install 8
- - |
- if [[ $GROUP == python ]]; then
- pip install codecov
- elif [[ $GROUP == js ]]; then
- npm install -g codecov
- fi
-install:
- - |
- if [[ $GROUP == python ]]; then
- pip install --upgrade ".[test]" -v
- elif [[ $GROUP == js ]]; then
- pip install --upgrade -e ".[test]" -v
- elif [[ $GROUP == docs ]]; then
- pip install --upgrade ".[test, examples, docs]" -v
- fi
-before_script:
- # Set up a virtual screen for Firefox browser testing:
- - |
- if [[ $GROUP == js ]]; then
- export CHROME_BIN=chromium-browser
- fi
- git config --global user.email travis@fake.com
- git config --global user.name "Travis CI"
-script:
- - |
- if [[ $GROUP == python ]]; then
- EXIT_STATUS=0
- pushd $(mktemp -d)
- py.test -l --cov-report xml:$TRAVIS_BUILD_DIR/coverage.xml --cov=pgljupyter --pyargs pgljupyter || EXIT_STATUS=$?
- popd
- (exit $EXIT_STATUS)
- elif [[ $GROUP == js ]]; then
- npm test
- elif [[ $GROUP == docs ]]; then
- EXIT_STATUS=0
- cd docs
- make html || EXIT_STATUS=$?
- make linkcheck || EXIT_STATUS=$?
- cd ..
- python -m pytest_check_links --links-ext=.md -o testpaths=. -o addopts= || EXIT_STATUS=$?
- (exit $EXIT_STATUS)
- fi
-after_success:
- - codecov
diff --git a/MANIFEST.in b/MANIFEST.in
index 58affb1..539b8cd 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -1,36 +1,18 @@
-include LICENSE.txt
-include README.md
+include LICENSE
+include *.md
+include pyproject.toml
-include setupbase.py
-include pytest.ini
-include .coverage.rc
-
-include tsconfig.json
include package.json
-include webpack.config.js
-include pgljupyter/labextension/*.tgz
-
-# Documentation
-#graft docs
-exclude docs/\#*
-prune docs/build
-prune docs/gh-pages
-prune docs/dist
-
-# Examples
-#graft examples
-
-# Tests
-prune tests
+include install.json
+include ts*.json
+include yarn.lock
# Javascript files
-graft pgljupyter/nbextension
graft src
+graft css
prune src/pgljs/node_modules
prune src/pgljs/plantgl
prune src/pgljs/debug
-prune src/pgljs/build
-prune src/pgljs/dist
prune **/node_modules
prune *.js.map
prune examples
diff --git a/README.md b/README.md
index f24de14..fd02691 100644
--- a/README.md
+++ b/README.md
@@ -189,14 +189,13 @@ jupyter labextension install @jupyter-widgets/jupyterlab-manager
pip install pgljupyter
```
-### Build, install and run from source
+### Development install
- install lpy, plantgl, jupyterlab, widgets and widgetsextension
```bash
-conda create -y -n pgl -c fredboudon -c conda-forge openalea.lpy jupyterlab ipywidgets
-conda activate pgl
-jupyter labextension install --no-build @jupyter-widgets/jupyterlab-manager
+mamba env create -f environment-dev.yml
+conda activate pgljupyter-dev
```
- install emsdk: https://emscripten.org/docs/getting_started/downloads.html
@@ -204,8 +203,8 @@ jupyter labextension install --no-build @jupyter-widgets/jupyterlab-manager
```bash
git clone https://github.com/emscripten-core/emsdk.git
cd emsdk
-./emsdk install 2.0.20
-./emsdk activate 2.0.20
+./emsdk install 2.0.29
+./emsdk activate 2.0.29
source ./emsdk_env.sh
cd ..
```
@@ -226,29 +225,30 @@ npm install
cd ../..
```
- - install pgljupyter deps and build (requires activation of emsdk i.e. source ./emsdk_env.sh)
+ - install pgljupyter deps and build (requires activated emsdk i.e. source ./emsdk_env.sh)
```bash
npm install
npm run build:all
+pip install -e .
+jupyter labextension develop . --overwrite
```
-
- - install python modules and jupyter extensions
+ - run lab
```bash
-pip install -e .
-jupyter nbextension install --sys-prefix --overwrite --py pgljupyter
-jupyter nbextension enable --sys-prefix --py pgljupyter
-jupyter labextension install .
-jupyter lab clean
+jupyter lab --notebook-dir=./examples
```
- - run the lab
+### Development uninstall
```bash
-jupyter lab --notebook-dir=./examples
+pip uninstall pgljupyter
```
+In development mode, you will also need to remove the symlink created by `jupyter labextension develop`
+command. To find its location, you can run `jupyter labextension list` to figure out where the `labextensions`
+folder is located. Then you can remove the symlink named `pgljupyter` within that folder.
+
## Docker
Run jupyter as docker container locally. Replace `/examples` with the path to your notebooks.
diff --git a/HOWTO.md b/RELEASE.md
similarity index 100%
rename from HOWTO.md
rename to RELEASE.md
diff --git a/appveyor.yml b/appveyor.yml
deleted file mode 100644
index b817807..0000000
--- a/appveyor.yml
+++ /dev/null
@@ -1,62 +0,0 @@
-# Do not build feature branch with open Pull Requests
-skip_branch_with_pr: true
-
-# environment variables
-environment:
- nodejs_version: "8"
- matrix:
- - PYTHON: "C:\\Miniconda3-x64"
- PYTHON_VERSION: "3.7"
- PYTHON_MAJOR: 3
- PYTHON_ARCH: "64"
- - PYTHON: "C:\\Miniconda3"
- PYTHON_VERSION: "3.4"
- PYTHON_MAJOR: 3
- PYTHON_ARCH: "32"
-
-# build cache to preserve files/folders between builds
-cache:
- - '%AppData%/npm-cache'
- - '%PYTHON%/pkgs'
- - '%LOCALAPPDATA%\pip\Cache'
-
-# scripts that run after cloning repository
-install:
- # Install node:
- - ps: Install-Product node $env:nodejs_version
- # Ensure python scripts are from right version:
- - 'SET "PATH=%PYTHON%\Scripts;%PYTHON%;%PATH%"'
- # Setup conda:
- - 'conda list'
- - 'conda update conda -y'
- # If 32 bit, force conda to use it:
- - 'IF %PYTHON_ARCH% EQU 32 SET CONDA_FORCE_32BIT=1'
- - 'conda create -n test_env python=%PYTHON_VERSION% -y'
- - 'activate test_env'
- # Update install tools:
- - 'conda install setuptools pip -y'
- - 'python -m pip install --upgrade pip'
- - 'python -m easy_install --upgrade setuptools'
- # Install coverage utilities:
- - 'pip install codecov'
- # Install our package:
- - 'pip install --upgrade ".[test]" -v'
-
-build: off
-
-# scripts to run before tests
-before_test:
- - git config --global user.email appveyor@fake.com
- - git config --global user.name "AppVeyor CI"
- - set "tmptestdir=%tmp%\pgljupyter-%RANDOM%"
- - mkdir "%tmptestdir%"
- - cd "%tmptestdir%"
-
-
-# to run your custom scripts instead of automatic tests
-test_script:
- - 'py.test -l --cov-report xml:"%APPVEYOR_BUILD_FOLDER%\coverage.xml" --cov=pgljupyter --pyargs pgljupyter'
-
-on_success:
- - cd "%APPVEYOR_BUILD_FOLDER%"
- - codecov -X gcov --file "%APPVEYOR_BUILD_FOLDER%\coverage.xml"
diff --git a/binder/Dockerfile b/binder/Dockerfile
index cc2c7fa..c293744 100644
--- a/binder/Dockerfile
+++ b/binder/Dockerfile
@@ -1,4 +1,4 @@
-FROM jvail/plantgl-jupyter:1.1.0
+FROM jvail/plantgl-jupyter:2.0.0
ARG NB_USER=jovyan
ARG NB_UID=1000
diff --git a/codecov.yml b/codecov.yml
deleted file mode 100644
index b0b6fa9..0000000
--- a/codecov.yml
+++ /dev/null
@@ -1,12 +0,0 @@
-comment: off
-# show coverage in CI status, but never consider it a failure
-coverage:
- status:
- project:
- default:
- target: 0%
- patch:
- default:
- target: 0%
-ignore:
- - "pgljupyter/tests"
diff --git a/css/widget.css b/css/widget.css
index c0f1171..866f855 100644
--- a/css/widget.css
+++ b/css/widget.css
@@ -67,6 +67,19 @@
--mdc-theme-primary: rgb(75, 75, 75);
--mdc-icon-size: 30px;
--mdc-button-size: 35px;
+ --mdc-switch-selected-handle-color: #F37726;
+ --mdc-switch-selected-hover-handle-color: #F37726;
+ --mdc-switch-selected-pressed-handle-color: #F37726;
+ --mdc-switch-selected-focus-handle-color: #F37726;
+ --mdc-switch-selected-track-color: rgb(100, 100, 100);
+ --mdc-switch-selected-hover-track-color: rgb(100, 100, 100);
+ --mdc-switch-selected-pressed-track-color: rgb(100, 100, 100);
+ --mdc-switch-selected-focus-track-color: rgb(100, 100, 100);
+ --mdc-switch-unselected-track-color: rgb(100, 100, 100);
+ --mdc-switch-unselected-handle-color: rgb(100, 100, 100);
+ --mdc-switch-unselected-hover-handle-color: rgb(100, 100, 100);
+ --mdc-switch-unselected-pressed-handle-color: rgb(100, 100, 100);
+ --mdc-switch-unselected-focus-handle-color: rgb(100, 100, 100);
}
.pgl-jupyter-pgl-widget-controls-header {
diff --git a/environment-dev.yml b/environment-dev.yml
new file mode 100644
index 0000000..6ebd5ad
--- /dev/null
+++ b/environment-dev.yml
@@ -0,0 +1,17 @@
+name: pgljupyter-dev
+channels:
+ - fredboudon
+ - conda-forge
+dependencies:
+ - python=3.9.*
+ - jupyterlab=3.4.*
+ - jupyter-packaging
+ - ipywidgets=7.6.*
+ - openalea.lpy=3.9.*
+ - openalea.plantgl=3.14.*
+ - flake8
+ - pip
+ - pip:
+ # build & release: see https://github.com/jupyterlab/extension-cookiecutter-ts
+ - build
+ - twine
diff --git a/install.json b/install.json
new file mode 100644
index 0000000..06147f9
--- /dev/null
+++ b/install.json
@@ -0,0 +1,5 @@
+{
+ "packageManager": "python",
+ "packageName": "pgljupyter",
+ "uninstallInstructions": "Use your Python package manager (pip, conda, etc.) to uninstall the package pgljupyter"
+}
diff --git a/package-lock.json b/package-lock.json
index 8573bc6..d533d2d 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -1,7473 +1,15812 @@
{
"name": "pgljupyter",
- "version": "1.2.0",
+ "version": "2.0.0",
"lockfileVersion": 1,
"requires": true,
"dependencies": {
- "@babel/runtime": {
- "version": "7.13.10",
- "resolved": "https://registry.npmjs.org/@babel/runtime/-/runtime-7.13.10.tgz",
- "integrity": "sha512-4QPkjJq6Ns3V/RgpEahRk+AGfL0eO6RHHtTWoNNr5mO49G6B5+X6d6THgWEAvTrznU5xYpbAlVKRYcsCgh/Akw==",
- "requires": {
- "regenerator-runtime": "^0.13.4"
- }
- },
- "@blueprintjs/core": {
- "version": "3.42.0",
- "resolved": "https://registry.npmjs.org/@blueprintjs/core/-/core-3.42.0.tgz",
- "integrity": "sha512-ln+4SNqVUnAGKy8r39l+3u/ycI9YEdPUT7bWUI4lFTyckX+eQzj4Jznqvy8UljXXzJwjCNABFs83OjG70QdAQw==",
- "requires": {
- "@blueprintjs/icons": "^3.26.0",
- "@types/dom4": "^2.0.1",
- "classnames": "^2.2",
- "dom4": "^2.1.5",
- "normalize.css": "^8.0.1",
- "popper.js": "^1.16.1",
- "react-lifecycles-compat": "^3.0.4",
- "react-popper": "^1.3.7",
- "react-transition-group": "^2.9.0",
- "resize-observer-polyfill": "^1.5.1",
- "tslib": "~1.13.0"
- }
- },
- "@blueprintjs/icons": {
- "version": "3.26.0",
- "resolved": "https://registry.npmjs.org/@blueprintjs/icons/-/icons-3.26.0.tgz",
- "integrity": "sha512-1+yhYH1Fjj5qGx8drZUL2L1R42MiN0WVHTTKYqGEV9TAzhvFHCSZgALD7WNQa+FEibw/8B4U+79IRgUPJNEjow==",
- "requires": {
- "classnames": "^2.2",
- "tslib": "~1.13.0"
- }
- },
- "@blueprintjs/select": {
- "version": "3.15.9",
- "resolved": "https://registry.npmjs.org/@blueprintjs/select/-/select-3.15.9.tgz",
- "integrity": "sha512-MBD6mud1XXFnLC2C6FP9OZ5gdfqv4LkpYkpsImtgKUINb31Jz9GE3S1d21PICuzuxcvZWyCku+t+P1lOgJVgxA==",
- "requires": {
- "@blueprintjs/core": "^3.42.0",
- "classnames": "^2.2",
- "tslib": "~1.13.0"
- }
- },
- "@fortawesome/fontawesome-free": {
- "version": "5.15.3",
- "resolved": "https://registry.npmjs.org/@fortawesome/fontawesome-free/-/fontawesome-free-5.15.3.tgz",
- "integrity": "sha512-rFnSUN/QOtnOAgqFRooTA3H57JLDm0QEG/jPdk+tLQNL/eWd+Aok8g3qCI+Q1xuDPWpGW/i9JySpJVsq8Q0s9w=="
- },
- "@hypnosphi/create-react-context": {
- "version": "0.3.1",
- "resolved": "https://registry.npmjs.org/@hypnosphi/create-react-context/-/create-react-context-0.3.1.tgz",
- "integrity": "sha512-V1klUed202XahrWJLLOT3EXNeCpFHCcJntdFGI15ntCwau+jfT386w7OFTMaCqOgXUH1fa0w/I1oZs+i/Rfr0A==",
+ "@ampproject/remapping": {
+ "version": "2.2.0",
+ "resolved": "https://registry.npmjs.org/@ampproject/remapping/-/remapping-2.2.0.tgz",
+ "integrity": "sha512-qRmjj8nj9qmLTQXXmaR1cck3UXSRMPrbsLJAasZpF+t3riI71BXed5ebIOYwQntykeZuhjsdweEc9BxH5Jc26w==",
+ "dev": true,
"requires": {
- "gud": "^1.0.0",
- "warning": "^4.0.3"
+ "@jridgewell/gen-mapping": "^0.1.0",
+ "@jridgewell/trace-mapping": "^0.3.9"
}
},
- "@jupyter-widgets/base": {
- "version": "4.0.0",
- "resolved": "https://registry.npmjs.org/@jupyter-widgets/base/-/base-4.0.0.tgz",
- "integrity": "sha512-lBQgLYzq6C+XjfVJTidk+rckKo/+xlTgIm1XUtACA3BUz8bgi2du2zmbYkcrplJMwGub4QWP6GnKgM5ZZRhzYg==",
+ "@babel/code-frame": {
+ "version": "7.16.7",
+ "resolved": "https://registry.npmjs.org/@babel/code-frame/-/code-frame-7.16.7.tgz",
+ "integrity": "sha512-iAXqUn8IIeBTNd72xsFlgaXHkMBMt6y4HJp1tIaK465CWLT/fG1aqB7ykr95gHHmlBdGbFeWWfyB4NJJ0nmeIg==",
+ "dev": true,
"requires": {
- "@jupyterlab/services": "^6.0.0",
- "@lumino/coreutils": "^1.2.0",
- "@lumino/messaging": "^1.2.1",
- "@lumino/widgets": "^1.3.0",
- "@types/backbone": "^1.4.1",
- "@types/lodash": "^4.14.134",
- "backbone": "1.2.3",
- "base64-js": "^1.2.1",
- "jquery": "^3.1.1",
- "lodash": "^4.17.4"
+ "@babel/highlight": "^7.16.7"
}
},
- "@jupyter-widgets/controls": {
- "version": "3.0.0",
- "resolved": "https://registry.npmjs.org/@jupyter-widgets/controls/-/controls-3.0.0.tgz",
- "integrity": "sha512-VyoBxUp/8pf7IFlM4hriD/UvYpHzXFXrUAaT/NRAhMUFO4Ruh4ALcxeHdWFnqxMjiSyOnWdjzdIeQL0pYi83Gg==",
- "requires": {
- "@jupyter-widgets/base": "^4.0.0",
- "@lumino/algorithm": "^1.1.0",
- "@lumino/domutils": "^1.1.0",
- "@lumino/messaging": "^1.2.1",
- "@lumino/signaling": "^1.2.0",
- "@lumino/widgets": "^1.3.0",
- "d3-format": "^1.3.0",
- "jquery": "^3.1.1",
- "jquery-ui": "^1.12.1",
- "underscore": "^1.8.3"
- }
+ "@babel/compat-data": {
+ "version": "7.17.10",
+ "resolved": "https://registry.npmjs.org/@babel/compat-data/-/compat-data-7.17.10.tgz",
+ "integrity": "sha512-GZt/TCsG70Ms19gfZO1tM4CVnXsPgEPBCpJu+Qz3L0LUDsY5nZqFZglIoPC1kIYOtNBZlrnFT+klg12vFGZXrw==",
+ "dev": true
},
- "@jupyterlab/application": {
- "version": "3.0.7",
- "resolved": "https://registry.npmjs.org/@jupyterlab/application/-/application-3.0.7.tgz",
- "integrity": "sha512-l3g9LUMRtHIclwyNlSqmE9TUe8k/kJX5jB6E+a5iruRMjlX3Oij1gubIK1XXdUR7c9o/nuBA6DVBWyhhQ51PoQ==",
+ "@babel/core": {
+ "version": "7.18.0",
+ "resolved": "https://registry.npmjs.org/@babel/core/-/core-7.18.0.tgz",
+ "integrity": "sha512-Xyw74OlJwDijToNi0+6BBI5mLLR5+5R3bcSH80LXzjzEGEUlvNzujEE71BaD/ApEZHAvFI/Mlmp4M5lIkdeeWw==",
+ "dev": true,
"requires": {
- "@fortawesome/fontawesome-free": "^5.12.0",
- "@jupyterlab/apputils": "^3.0.5",
- "@jupyterlab/coreutils": "^5.0.3",
- "@jupyterlab/docregistry": "^3.0.7",
- "@jupyterlab/rendermime": "^3.0.6",
- "@jupyterlab/rendermime-interfaces": "^3.0.5",
- "@jupyterlab/services": "^6.0.5",
- "@jupyterlab/statedb": "^3.0.3",
- "@jupyterlab/translation": "^3.0.5",
- "@jupyterlab/ui-components": "^3.0.4",
- "@lumino/algorithm": "^1.3.3",
- "@lumino/application": "^1.13.1",
- "@lumino/commands": "^1.12.0",
- "@lumino/coreutils": "^1.5.3",
- "@lumino/disposable": "^1.4.3",
- "@lumino/messaging": "^1.4.3",
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+ "dev": true,
+ "requires": {
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+ }
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+ "fast-glob": {
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+ "resolved": "https://registry.npmjs.org/fast-glob/-/fast-glob-2.2.7.tgz",
+ "integrity": "sha512-g1KuQwHOZAmOZMuBtHdxDtju+T2RT8jgCC9aANsbpdiDDTSnjgfuVsIBNKbUeJI3oKMRExcfNDtJl4OhbffMsw==",
+ "dev": true,
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+ "glob-parent": "^3.1.0",
+ "is-glob": "^4.0.0",
+ "merge2": "^1.2.3",
+ "micromatch": "^3.1.10"
+ }
+ },
"find-up": {
"version": "3.0.0",
"resolved": "https://registry.npmjs.org/find-up/-/find-up-3.0.0.tgz",
@@ -7477,6 +15816,28 @@
"locate-path": "^3.0.0"
}
},
+ "globby": {
+ "version": "9.2.0",
+ "resolved": "https://registry.npmjs.org/globby/-/globby-9.2.0.tgz",
+ "integrity": "sha512-ollPHROa5mcxDEkwg6bPt3QbEf4pDQSNtd6JPL1YvOvAo/7/0VAm9TccUeoTmarjPw4pfUthSCqcyfNB1I3ZSg==",
+ "dev": true,
+ "requires": {
+ "@types/glob": "^7.1.1",
+ "array-union": "^1.0.2",
+ "dir-glob": "^2.2.2",
+ "fast-glob": "^2.2.6",
+ "glob": "^7.1.3",
+ "ignore": "^4.0.3",
+ "pify": "^4.0.1",
+ "slash": "^2.0.0"
+ }
+ },
+ "ignore": {
+ "version": "4.0.6",
+ "resolved": "https://registry.npmjs.org/ignore/-/ignore-4.0.6.tgz",
+ "integrity": "sha512-cyFDKrqc/YdcWFniJhzI42+AzS+gNwmUzOSFcRCQYwySuBBBy/KjuxWLZ/FHEH6Moq1NizMOBWyTcv8O4OZIMg==",
+ "dev": true
+ },
"locate-path": {
"version": "3.0.0",
"resolved": "https://registry.npmjs.org/locate-path/-/locate-path-3.0.0.tgz",
@@ -7487,6 +15848,48 @@
"path-exists": "^3.0.0"
}
},
+ "mem-fs-editor": {
+ "version": "7.1.0",
+ "resolved": "https://registry.npmjs.org/mem-fs-editor/-/mem-fs-editor-7.1.0.tgz",
+ "integrity": "sha512-BH6QEqCXSqGeX48V7zu+e3cMwHU7x640NB8Zk8VNvVZniz+p4FK60pMx/3yfkzo6miI6G3a8pH6z7FeuIzqrzA==",
+ "dev": true,
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+ "deep-extend": "^0.6.0",
+ "ejs": "^3.1.5",
+ "glob": "^7.1.4",
+ "globby": "^9.2.0",
+ "isbinaryfile": "^4.0.0",
+ "mkdirp": "^1.0.0",
+ "multimatch": "^4.0.0",
+ "rimraf": "^3.0.0",
+ "through2": "^3.0.2",
+ "vinyl": "^2.2.1"
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+ "resolved": "https://registry.npmjs.org/rimraf/-/rimraf-3.0.2.tgz",
+ "integrity": "sha512-JZkJMZkAGFFPP2YqXZXPbMlMBgsxzE8ILs4lMIX/2o0L9UBw9O/Y3o6wFw/i9YLapcUJWwqbi3kdxIPdC62TIA==",
+ "dev": true,
+ "requires": {
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+ }
+ }
+ }
+ },
+ "mkdirp": {
+ "version": "1.0.4",
+ "resolved": "https://registry.npmjs.org/mkdirp/-/mkdirp-1.0.4.tgz",
+ "integrity": "sha512-vVqVZQyf3WLx2Shd0qJ9xuvqgAyKPLAiqITEtqW0oIUjzo3PePDd6fW9iFz30ef7Ysp/oiWqbhszeGWW2T6Gzw==",
+ "dev": true
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+ "integrity": "sha512-sGkPx+VjMtmA6MX27oA4FBFELFCZZ4S4XqeGOXCv68tT+jb3vk/RyaKWP0PTKyWtmLSM0b+adUTEvbs1PEaH2w==",
+ "dev": true
+ },
"p-limit": {
"version": "2.3.0",
"resolved": "https://registry.npmjs.org/p-limit/-/p-limit-2.3.0.tgz",
@@ -7510,17 +15913,36 @@
"resolved": "https://registry.npmjs.org/path-exists/-/path-exists-3.0.0.tgz",
"integrity": "sha1-zg6+ql94yxiSXqfYENe1mwEP1RU=",
"dev": true
+ },
+ "pify": {
+ "version": "4.0.1",
+ "resolved": "https://registry.npmjs.org/pify/-/pify-4.0.1.tgz",
+ "integrity": "sha512-uB80kBFb/tfd68bVleG9T5GGsGPjJrLAUpR5PZIrhBnIaRTQRjqdJSsIKkOP6OAIFbj7GOrcudc5pNjZ+geV2g==",
+ "dev": true
+ },
+ "semver": {
+ "version": "7.3.7",
+ "resolved": "https://registry.npmjs.org/semver/-/semver-7.3.7.tgz",
+ "integrity": "sha512-QlYTucUYOews+WeEujDoEGziz4K6c47V/Bd+LjSSYcA94p+DmINdf7ncaUinThfvZyu13lN9OY1XDxt8C0Tw0g==",
+ "dev": true,
+ "requires": {
+ "lru-cache": "^6.0.0"
+ }
+ },
+ "slash": {
+ "version": "2.0.0",
+ "resolved": "https://registry.npmjs.org/slash/-/slash-2.0.0.tgz",
+ "integrity": "sha512-ZYKh3Wh2z1PpEXWr0MpSBZ0V6mZHAQfYevttO11c51CaWjGTaadiKZ+wVt1PbMlDV5qhMFslpZCemhwOK7C89A==",
+ "dev": true
}
}
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- "resolved": "https://registry.npmjs.org/yargs-parser/-/yargs-parser-13.1.2.tgz",
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- "dev": true,
+ "yjs": {
+ "version": "13.5.38",
+ "resolved": "https://registry.npmjs.org/yjs/-/yjs-13.5.38.tgz",
+ "integrity": "sha512-YCHj6DkgxhIRqdxqTI+htGAhvfmgkS974pz+/OOiuLOj0EgGfUKvtp4yYyQGg1Wf3m4oLet9x7gEvCrxaGiVZQ==",
"requires": {
- "camelcase": "^5.0.0",
- "decamelize": "^1.2.0"
+ "lib0": "^0.2.49"
}
},
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diff --git a/package.json b/package.json
index 832d489..900b01e 100644
--- a/package.json
+++ b/package.json
@@ -1,7 +1,7 @@
{
"name": "pgljupyter",
- "version": "1.2.0",
- "description": "PlantGL jupyter widget",
+ "version": "2.0.0-beta",
+ "description": "PlantGL and L-Py Jupyter widgets",
"keywords": [
"jupyter",
"jupyterlab",
@@ -16,65 +16,62 @@
"dist/*.js",
"css/*.css"
],
- "homepage": "https://github.com/jvail/plantgl-jupyter",
+ "homepage": "https://github.com/fredboudon/plantgl-jupyter",
"bugs": {
- "url": "https://github.com/jvail/plantgl-jupyter/issues"
+ "url": "https://github.com/fredboudon/plantgl-jupyter/issues"
},
"license": "CeCILL",
- "author": {
- "name": "Jan Vaillant",
- "email": "jan.vaillant@cirad.fr"
- },
"repository": {
"type": "git",
- "url": "https://github.com/jvail/plantgl-jupyter.git"
+ "url": "https://github.com/fredboudon/plantgl-jupyter.git"
},
"main": "lib/index.js",
- "types": "./lib/index.d.ts",
+ "types": "lib/index.d.ts",
"scripts": {
- "build": "npm run build:lib && npm run build:labextension && npm run build:nbextension",
- "build:labextension": "npm run clean:labextension && mkdirp pgljupyter/labextension && cd pgljupyter/labextension && npm pack ../..",
+ "build": "jlpm build:lib && jlpm build:labextension:dev",
+ "build:prod": "jlpm clean && npm run build:pgljs && jlpm build:lib && jlpm build:nbextension && jlpm build:labextension",
+ "build:labextension": "jupyter labextension build .",
+ "build:labextension:dev": "jupyter labextension build --development True .",
+ "build:nbextension": "webpack",
"build:lib": "tsc",
"build:pgljs": "cd src/pgljs && npm run build && mkdir -p ../../lib/pgljs && cp -a dist ../../lib/pgljs",
- "build:nbextension": "webpack -p",
- "build:all": "npm run build:pgljs && npm run build:lib && npm run build:labextension && npm run build:nbextension",
- "clean": "npm run clean:lib && npm run clean:nbextension && npm run clean:labextension && rimraf dist",
- "clean:lib": "rimraf lib",
+ "build:all": "npm run build:pgljs && npm run build",
+ "clean": "jlpm clean:lib",
+ "clean:lib": "rimraf lib tsconfig.tsbuildinfo",
+ "clean:lintcache": "rimraf .eslintcache .stylelintcache",
"clean:labextension": "rimraf pgljupyter/labextension",
- "clean:nbextension": "rimraf pgljupyter/nbextension/static/index.js",
- "prepack": "npm run build:lib",
- "watch": "npm-run-all -p watch:*",
- "watch:lib": "tsc -w",
- "watch:nbextension": "webpack --watch --mode=development"
+ "clean:nbextension": "rimraf ts-widget-extension/nbextension/static/index.js",
+ "clean:all": "jlpm clean:lib && jlpm clean:labextension && jlpm clean:nbextension && jlpm clean:lintcache",
+ "install:extension": "jlpm build"
},
"dependencies": {
- "@jupyter-widgets/base": "^4.0.0",
- "@jupyter-widgets/controls": "^3.0.0",
- "@jupyterlab/application": "^3.0.7",
- "@jupyterlab/codemirror": "^3.0.5",
- "@jupyterlab/docregistry": "^3.0.7",
- "@jupyterlab/rendermime": "^3.0.6",
- "@jupyterlab/rendermime-interfaces": "^3.0.5",
- "@jupyterlab/ui-components": "^3.0.4",
- "@material/mwc-circular-progress": "^0.18.0",
- "@material/mwc-formfield": "^0.18.0",
- "@material/mwc-icon-button": "^0.18.0",
- "@material/mwc-icon-button-toggle": "^0.18.0",
- "@material/mwc-linear-progress": "^0.18.0",
- "@material/mwc-switch": "^0.18.0",
- "d3": "^5.16.0",
- "lit-html": "^1.3.0",
+ "@jupyter-widgets/base": "^4.1.0",
+ "@jupyter-widgets/controls": "^3.1.0",
+ "@jupyterlab/application": "^3.4.2",
+ "@jupyterlab/codemirror": "^3.4.2",
+ "@jupyterlab/docregistry": "^3.4.2",
+ "@jupyterlab/rendermime": "^3.4.2",
+ "@jupyterlab/rendermime-interfaces": "^3.4.2",
+ "@jupyterlab/ui-components": "^3.4.2",
+ "@material/mwc-circular-progress": "^0.26.1",
+ "@material/mwc-formfield": "^0.26.1",
+ "@material/mwc-icon-button": "^0.26.1",
+ "@material/mwc-icon-button-toggle": "^0.26.1",
+ "@material/mwc-linear-progress": "^0.26.1",
+ "@material/mwc-switch": "^0.26.1",
+ "d3": "^7.4.4",
+ "lit-html": "^2.2.4",
"nurbs": "^1.1.1",
- "three": "^0.127.0"
+ "three": "^0.140.2"
},
"devDependencies": {
- "@lumino/application": "^1.16.0",
- "@lumino/widgets": "^1.19.0",
+ "@jupyterlab/builder": "^3.4.2",
+ "@lumino/widgets": "^1.32.0",
"@types/d3": "^5.16.4",
"@types/expect.js": "^0.3.29",
"@types/node": "^10.17.56",
"@types/webpack-env": "^1.16.0",
- "css-loader": "^3.6.0",
+ "css-loader": "^5.0.1",
"expect.js": "^0.3.1",
"fs-extra": "^7.0.0",
"mkdirp": "^0.5.1",
@@ -85,13 +82,27 @@
"svg-inline-loader": "^0.8.2",
"terser-webpack-plugin": "^3.1.0",
"ts-loader": "^5.2.1",
- "typescript": "^4.0.7",
- "webpack": "^4.46.0",
+ "typescript": "^4.6.4",
+ "webpack": "^5.72.1",
"webpack-bundle-analyzer": "^3.9.0",
- "webpack-cli": "^3.3.12"
+ "webpack-cli": "^4.0.0"
+ },
+ "publishConfig": {
+ "access": "public"
},
"jupyterlab": {
"extension": "lib/labplugin",
- "outputDir": "pgljupyter/labextension/"
+ "outputDir": "pgljupyter/labextension",
+ "sharedPackages": {
+ "@jupyter-widgets/base": {
+ "bundled": false
+ },
+ "@jupyter-widgets/controls": {
+ "bundled": false
+ },
+ "@lumino/widgets": {
+ "bundled": false
+ }
+ }
}
}
diff --git a/pgljupyter/__init__.py b/pgljupyter/__init__.py
index 77ce421..4333ae0 100644
--- a/pgljupyter/__init__.py
+++ b/pgljupyter/__init__.py
@@ -1,10 +1,26 @@
+import json
+import os.path as osp
+
+from ._version import __version__
+
from .widgets import SceneWidget, LsystemWidget
from .editors import ParameterEditor
from ._version import __version__, version_info
-from .nbextension import _jupyter_nbextension_paths
+# from .nbextension import _jupyter_nbextension_paths
from .magics import PGLMagics
try:
get_ipython().register_magics(PGLMagics)
except NameError:
pass
+
+
+with open(osp.join(osp.abspath(osp.dirname(__file__)), 'labextension', 'package.json')) as fid:
+ data = json.load(fid)
+
+
+def _jupyter_labextension_paths():
+ return [{
+ 'src': 'labextension',
+ 'dest': data['name']
+ }]
diff --git a/pgljupyter/_frontend.py b/pgljupyter/_frontend.py
index 77e89fd..ccf09b6 100644
--- a/pgljupyter/_frontend.py
+++ b/pgljupyter/_frontend.py
@@ -3,4 +3,4 @@
"""
module_name = "pgljupyter"
-module_version = "^1.2.0"
+module_version = "^2.0.0-beta"
diff --git a/pgljupyter/_version.py b/pgljupyter/_version.py
index d377bad..c748977 100644
--- a/pgljupyter/_version.py
+++ b/pgljupyter/_version.py
@@ -1,2 +1,2 @@
-version_info = (1, 2, 0) # (0, 1, 16, '-devx')
+version_info = (2, 0, 0, '-beta')
__version__ = ".".join(map(str, version_info))
diff --git a/pgljupyter/editors.py b/pgljupyter/editors.py
index 880d570..0a4d12e 100644
--- a/pgljupyter/editors.py
+++ b/pgljupyter/editors.py
@@ -8,12 +8,17 @@
from enum import Enum
from ipywidgets.widgets import (
- register, DOMWidget, VBox, HBox, Layout, Accordion, Dropdown, Button,
- Text, ColorPicker, Checkbox, IntSlider, FloatSlider, BoundedIntText
+ register, DOMWidget, VBox, HBox, Layout, Accordion, Dropdown, Button,
+ Text, ColorPicker, Checkbox, IntSlider, FloatSlider, BoundedIntText,
+ FloatText, BoundedFloatText, IntText
)
from traitlets import Unicode, List, Float, Bool, Int
from openalea.lpy.lsysparameters import (
- IntegerScalar, FloatScalar, BoolScalar, BaseScalar
+ LsystemParameters,
+ IntegerScalar,
+ FloatScalar,
+ BoolScalar,
+ BaseScalar
)
import openalea.plantgl.all as pgl
@@ -22,7 +27,7 @@
_property_name_regex = re.compile('^[^\\d\\W]\\w*\\Z')
-def make_scalar_editor(scalar, no_name=False):
+def make_scalar_editor(scalar, no_name=False, advanced=False):
editor = None
@@ -33,7 +38,8 @@ def make_scalar_editor(scalar, no_name=False):
min=scalar.minvalue,
max=scalar.maxvalue,
step=1,
- no_name=no_name
+ no_name=no_name,
+ advanced=advanced
)
elif isinstance(scalar, FloatScalar):
editor = FloatEditor(
@@ -41,8 +47,10 @@ def make_scalar_editor(scalar, no_name=False):
name=scalar.name,
min=scalar.minvalue,
max=scalar.maxvalue,
- step=1/10**scalar.precision,
- no_name=no_name
+ step=1 / 10**scalar.precision,
+ precision=scalar.precision,
+ no_name=no_name,
+ advanced=advanced
)
elif isinstance(scalar, BoolScalar):
editor = BoolEditor(
@@ -214,52 +222,77 @@ class FloatEditor(_Editor):
__min_ipt = None
__max_ipt = None
__step_ipt = None
+ __precision_ipt = None
__type = ''
value = Float(0).tag(sync=False)
min = Float(0).tag(sync=False)
max = Float(0).tag(sync=False)
step = Float(0).tag(sync=False)
+ precision = Int(2).tag(sync=False)
- def __init__(self, value, type='Float', min=1, max=10, step=1, **kwargs):
+ def __init__(self, value, type='Float', min=1, max=10, step=1, precision=2, **kwargs):
self.value = float(value)
description = kwargs['name'] if 'no_name' in kwargs and kwargs['no_name'] else 'value'
- self.__slider = FloatSlider(value, min=min, max=max, step=step, description=description, continuous_update=False)
- # self.__min_ipt = FloatText(min, description='min')
- # self.__max_ipt = FloatText(max, description='max')
- # self.__step_ipt = BoundedFloatText(step, description='step', min=0.01, max=1, step=step)
+ show_advanced_controls = 'advanced' in kwargs and kwargs['advanced']
+ self.__slider = FloatSlider(
+ value,
+ min=min,
+ max=max,
+ step=step,
+ description=description,
+ readout_format=f'.{precision}f',
+ continuous_update=False
+ )
+ self.__min_ipt = FloatText(min, step=step, description='min')
+ if show_advanced_controls:
+ self.__max_ipt = FloatText(max, step=step, description='max')
+ self.__step_ipt = BoundedFloatText(step, description='step', min=0.01, max=1, step=step)
+ self.__precision_ipt = BoundedIntText(precision, description='precision', min=0, max=10, step=1)
self.__slider.observe(self.__on_slider_changed, names='value')
- # self.__min_ipt.observe(self.__on_min_changed, names='value')
- # self.__max_ipt.observe(self.__on_max_changed, names='value')
- # self.__step_ipt.observe(self.__on_step_changed, names='value')
-
- kwargs['children'] = [
- self.__slider,
- # self.__min_ipt,
- # self.__max_ipt,
- # self.__step_ipt
- ]
+ if show_advanced_controls:
+ self.__min_ipt.observe(self.__on_min_changed, names='value')
+ self.__max_ipt.observe(self.__on_max_changed, names='value')
+ self.__step_ipt.observe(self.__on_step_changed, names='value')
+ self.__precision_ipt.observe(self.__on_precision_changed, names='value')
+
+ if show_advanced_controls:
+ kwargs['children'] = [
+ self.__slider,
+ self.__min_ipt,
+ self.__max_ipt,
+ self.__step_ipt,
+ self.__precision_ipt
+ ]
+ else:
+ kwargs['children'] = [
+ self.__slider
+ ]
super().__init__(**kwargs)
- # def __on_min_changed(self, change):
- # if self.__min_ipt.value < self.__slider.max:
- # self.__slider.min = self.__min_ipt.value
- # else:
- # self.__min_ipt.value = self.__slider.max - self.__step_ipt.value
- # self.min = self.__min_ipt.value
+ def __on_min_changed(self, change):
+ if self.__min_ipt.value < self.__slider.max:
+ self.__slider.min = self.__min_ipt.value
+ else:
+ self.__min_ipt.value = self.__slider.max - self.__step_ipt.value
+ self.min = self.__min_ipt.value
- # def __on_max_changed(self, change):
- # if self.__max_ipt.value > self.__slider.min:
- # self.__slider.max = self.__max_ipt.value
- # else:
- # self.__max_ipt.value = self.__slider.min + self.__step_ipt.value
- # self.max = self.__max_ipt.value
+ def __on_max_changed(self, change):
+ if self.__max_ipt.value > self.__slider.min:
+ self.__slider.max = self.__max_ipt.value
+ else:
+ self.__max_ipt.value = self.__slider.min + self.__step_ipt.value
+ self.max = self.__max_ipt.value
- # def __on_step_changed(self, change):
- # self.__slider.step = self.__step_ipt.value
- # self.step = self.__step_ipt.value
+ def __on_step_changed(self, change):
+ self.__slider.step = self.__step_ipt.value
+ self.step = self.__step_ipt.value
+
+ def __on_precision_changed(self, change):
+ self.__slider.readout_format = f'.{self.__precision_ipt.value}f'
+ self.precision = self.__precision_ipt.value
def __on_slider_changed(self, change):
self.value = self.__slider.value
@@ -278,49 +311,58 @@ class IntEditor(_Editor):
__step_ipt = None
value = Int(0).tag(sync=False)
- min = Int(0).tag(sync=False)
- max = Int(0).tag(sync=False)
+ minvalue = Int(0).tag(sync=False)
+ maxvalue = Int(0).tag(sync=False)
step = Int(0).tag(sync=False)
def __init__(self, value, type='Float', min=1, max=10, step=1, **kwargs):
self.value = int(value)
description = kwargs['name'] if 'no_name' in kwargs and kwargs['no_name'] else 'value'
+ show_advanced_controls = 'advanced' in kwargs and kwargs['advanced']
self.__slider = IntSlider(value, min, max, description=description, continuous_update=False)
- # self.__min_ipt = IntText(min, description='min')
- # self.__max_ipt = IntText(max, description='max')
- # self.__step_ipt = BoundedIntText(step, description='step', min=1, step=step)
+ if show_advanced_controls:
+ self.__min_ipt = IntText(min, description='min')
+ self.__max_ipt = IntText(max, description='max')
+ self.__step_ipt = BoundedIntText(step, description='step', min=1, step=step)
self.__slider.observe(self.__on_slider_changed, names='value')
- # self.__min_ipt.observe(self.__on_min_changed, names='value')
- # self.__max_ipt.observe(self.__on_max_changed, names='value')
- # self.__step_ipt.observe(self.__on_step_changed, names='value')
+ if show_advanced_controls:
+ self.__min_ipt.observe(self.__on_min_changed, names='value')
+ self.__max_ipt.observe(self.__on_max_changed, names='value')
+ self.__step_ipt.observe(self.__on_step_changed, names='value')
+
+ if show_advanced_controls:
+ kwargs['children'] = [
+ self.__slider,
+ self.__min_ipt,
+ self.__max_ipt,
+ self.__step_ipt
+ ]
+ else:
+ kwargs['children'] = [
+ self.__slider
+ ]
- kwargs['children'] = [
- self.__slider,
- # self.__min_ipt,
- # self.__max_ipt,
- # self.__step_ipt
- ]
super().__init__(**kwargs)
- # def __on_min_changed(self, change):
- # if self.__min_ipt.value < self.__slider.max:
- # self.__slider.min = self.__min_ipt.value
- # else:
- # self.__min_ipt.value = self.__slider.max - self.__step_ipt.value
- # self.min = self.__min_ipt.value
+ def __on_min_changed(self, change):
+ if self.__min_ipt.value < self.__slider.max:
+ self.__slider.min = self.__min_ipt.value
+ else:
+ self.__min_ipt.value = self.__slider.max - self.__step_ipt.value
+ self.minvalue = self.__min_ipt.value
- # def __on_max_changed(self, change):
- # if self.__max_ipt.value > self.__slider.min:
- # self.__slider.max = self.__max_ipt.value
- # else:
- # self.__max_ipt.value = self.__slider.min + self.__step_ipt.value
- # self.max = self.__max_ipt.value
+ def __on_max_changed(self, change):
+ if self.__max_ipt.value > self.__slider.min:
+ self.__slider.max = self.__max_ipt.value
+ else:
+ self.__max_ipt.value = self.__slider.min + self.__step_ipt.value
+ self.maxvalue = self.__max_ipt.value
- # def __on_step_changed(self, change):
- # self.__slider.step = self.__step_ipt.value
- # self.step = self.__step_ipt.value
+ def __on_step_changed(self, change):
+ self.__slider.step = self.__step_ipt.value
+ self.step = self.__step_ipt.value
def __on_slider_changed(self, change):
self.value = self.__slider.value
@@ -437,7 +479,7 @@ def __init__(self, index, ambient=[80, 80, 80], specular=[40, 40, 40], emission=
super().__init__(**kwargs)
def __rgb_to_list(self, rgb):
- return [255, 0, 0] if len(rgb) != 7 else [int(v, 16) for v in [rgb[1:][i:i+2] for i in range(0, 6, 2)]]
+ return [255, 0, 0] if len(rgb) != 7 else [int(v, 16) for v in [rgb[1:][i:i + 2] for i in range(0, 6, 2)]]
def __on_index_changed(self, change):
self.index = self.__index.value
@@ -484,9 +526,10 @@ class ParameterEditor(VBox):
__add_category_btn = None
__add_category_txt = None
- __lp = None
+ __lp: LsystemParameters = None
+ __advanced = True
- def __init__(self, lp, filename='', **kwargs):
+ def __init__(self, lp: LsystemParameters, filename='', advanced=True, **kwargs):
self.__lp = lp
self.filename = filename
@@ -497,6 +540,7 @@ def __init__(self, lp, filename='', **kwargs):
self.__save_btn = Button(description='Save changes')
self.__add_category_btn = Button(description='Add category')
self.__add_category_txt = Text(placeholder='category name')
+ self.__advanced = advanced
self.__initialize()
super().__init__([VBox([
@@ -566,7 +610,7 @@ def on_lpy_context_change(self, context):
def __build_gui(self):
children = []
- titles = ['materials']
+ titles = []
item_layout = Layout(
margin='20px',
flex_flow='row wrap'
@@ -574,21 +618,6 @@ def __build_gui(self):
if self.__lp:
- box_materials = HBox(layout=item_layout)
-
- for index, color in self.__lp.get_colors().items():
- editor = make_color_editor(color, index, no_name=True)
- if editor:
- editor.observe(self.__on_editor_changed(color))
- box_materials.children = (*box_materials.children, editor)
-
- children.append(
- VBox([
- self.__menu('materials', box_materials),
- box_materials
- ])
- )
-
for category_name in self.__lp.get_category_names():
box_scalars = HBox(layout=item_layout)
@@ -596,7 +625,7 @@ def __build_gui(self):
for scalar in self.__lp.get_category_scalars(category_name):
- editor = make_scalar_editor(scalar, False)
+ editor = make_scalar_editor(scalar, False, advanced=self.__advanced)
if editor:
editor.observe(self.__on_editor_changed(scalar))
box_scalars.children = (*box_scalars.children, editor)
@@ -616,6 +645,21 @@ def __build_gui(self):
]))
titles.append(category_name)
+ box_materials = HBox(layout=item_layout)
+
+ for index, color in self.__lp.get_colors().items():
+ editor = make_color_editor(color, index, no_name=True)
+ if editor:
+ editor.observe(self.__on_editor_changed(color))
+ box_materials.children = (*box_materials.children, editor)
+ titles.append('materials')
+ children.append(
+ VBox([
+ self.__menu('materials', box_materials),
+ box_materials
+ ])
+ )
+
return (children, titles)
def __menu(self, parameter_type, box, category_name=None):
@@ -625,7 +669,7 @@ def __menu(self, parameter_type, box, category_name=None):
if parameter_type == 'scalars':
- def fn_add(self):
+ def fn_add(self: ParameterEditor):
value = None
@@ -637,15 +681,17 @@ def fn_add(self):
value = True
name = f'{ddn_add.value}_{len(box.children)}'
- scalar = self.__lp.add_scalar(name, value, category=category_name)
- editor = make_scalar_editor(scalar)
- editor.observe(self.__on_editor_changed(scalar))
- box.children = (*box.children, editor)
-
- if self.__auto_save:
- self.__save()
- if self.__auto_apply:
- self.on_lpy_context_change(self.__lp.dumps())
+ self.__lp.add_scalar(name, value, category=category_name)
+ for scalar in self.__lp.get_category_scalars(category_name):
+ if scalar.name == name:
+ editor = make_scalar_editor(scalar)
+ editor.observe(self.__on_editor_changed(scalar))
+ box.children = (*box.children, editor)
+ if self.__auto_save:
+ self.__save()
+ if self.__auto_apply:
+ self.on_lpy_context_change(self.__lp.dumps())
+ break
ddn_add.options = ['Integer', 'Float', 'Bool']
@@ -669,13 +715,10 @@ def fn_add(self):
elif parameter_type == 'curves':
- def fn_add(self):
+ def fn_add(self: ParameterEditor):
name = f'{ddn_add.value}_{len(box.children)}'
- if ddn_add.value == 'Function':
- curve = self.__lp.add_function(name, category=category_name)
- else:
- curve = self.__lp.add_curve(name, category=category_name)
+ curve = self.__lp.add_graphicalparameter(name, value=None, ptype=ddn_add.value, category=category_name)
editor = make_curve_editor(curve)
editor.observe(self.__on_editor_changed(curve))
box.children = (*box.children, editor)
@@ -685,7 +728,7 @@ def fn_add(self):
if self.__auto_apply:
self.on_lpy_context_change(self.__lp.dumps())
- ddn_add.options = ['Curve', 'Function']
+ ddn_add.options = ['Curve2D', 'Function']
btn_add.on_click(lambda x: fn_add(self))
@@ -713,20 +756,19 @@ def on_param_changed(change):
if 'new' in change:
value = change['new']
name = change['name']
- if isinstance(param, BaseScalar):
- if name == 'name':
- param.name = value
- else:
- param.value = value
+ if isinstance(param, BaseScalar) and hasattr(param, name):
+ setattr(param, name, value)
elif isinstance(param, tuple):
if name == 'value':
if isinstance(param[1], (pgl.NurbsCurve2D, pgl.BezierCurve2D)):
param[1].ctrlPointList = pgl.Point3Array([pgl.Vector3(p[0], p[1], 1) for p in value])
+ param[1].setKnotListToDefault()
elif isinstance(param[1], pgl.Polyline2D):
param[1].pointList = pgl.Point2Array([pgl.Vector2(p[0], p[1]) for p in value])
+ param[1].setKnotListToDefault()
else:
param[1].name = value
- if self.__auto_apply:
+ if self.__auto_apply and name == 'value':
self.on_lpy_context_change(self.__lp.dumps())
if self.__auto_save:
self.__save()
diff --git a/pgljupyter/magics.py b/pgljupyter/magics.py
index 76e3fc8..937f424 100644
--- a/pgljupyter/magics.py
+++ b/pgljupyter/magics.py
@@ -4,13 +4,13 @@
)
from ipywidgets import HBox, Layout
-from openalea.lpy import Lsystem
+import openalea.lpy as lpy
from openalea.lpy.lsysparameters import LsystemParameters, BaseScalar
import openalea.plantgl.all as pgl
from .widgets import SceneWidget, LsystemWidget
from .editors import (
- make_color_editor, make_scalar_editor, make_curve_editor
+ FloatEditor, IntEditor, make_color_editor, make_scalar_editor, make_curve_editor
)
@@ -24,7 +24,8 @@ class PGLMagics(Magics):
@argument('--world', '-w', default=1.0, type=float, help='Size of the 3d scene in meters')
@argument('--unit', '-u', default='m', type=str, help='Unit of the model - m, dm, cm, mm')
@argument('--params', '-p', default='', type=str, help='Name of LsystemParameters instance with a "default" category')
- @argument('--animate', '-a', type=bool, help='Animate Lsystem')
+ @argument('--animate', '-a', help='Animate Lsystem')
+ @argument('--advanced-editor', '-e', help='Show all parameter controls')
def lpy(self, line, cell, local_ns):
args = parse_argstring(self.lpy, line)
@@ -32,7 +33,8 @@ def lpy(self, line, cell, local_ns):
world = args.world
unit = args.unit
lp = local_ns[args.params] if args.params and args.params in local_ns and isinstance(local_ns[args.params], LsystemParameters) else None
- animate = args.animate if args.animate is not None else False
+ animate = args.animate == 'True'
+ advanced = args.advanced_editor == 'True'
context = local_ns
size_display = (int(sizes[0]), int(sizes[1])) if len(sizes) > 1 else (int(sizes[0]), int(sizes[0]))
@@ -49,15 +51,21 @@ def on_value_changed(param):
def fn(change):
if 'new' in change:
value = change['new']
- if isinstance(param, BaseScalar):
- param.value = value
+ name = change['name']
+ if isinstance(param, BaseScalar) and hasattr(param, name):
+ setattr(param, name, value)
+ if name == 'value':
+ lsw.set_parameters(lp.dumps())
+
elif isinstance(param, tuple):
if isinstance(param[1], (pgl.NurbsCurve2D, pgl.BezierCurve2D)):
param[1].ctrlPointList = pgl.Point3Array([pgl.Vector3(p[0], p[1], 1) for p in value])
+ param[1].setKnotListToDefault()
elif isinstance(param[1], pgl.Polyline2D):
param[1].pointList = pgl.Point2Array([pgl.Vector2(p[0], p[1]) for p in value])
+ param[1].setKnotListToDefault()
+ lsw.set_parameters(lp.dumps())
- lsw.set_parameters(lp.dumps())
return fn
def on_material_changed(material):
@@ -73,8 +81,17 @@ def fn(change):
if lp:
for scalar in lp.get_category_scalars():
- editor = make_scalar_editor(scalar, True)
+ editor = make_scalar_editor(scalar, True, advanced=advanced)
if editor:
+ if type(editor) == IntEditor:
+ editor.observe(on_value_changed(scalar), 'minvalue')
+ editor.observe(on_value_changed(scalar), 'maxvalue')
+ elif type(editor) == FloatEditor:
+ editor.observe(on_value_changed(scalar), 'minvalue')
+ editor.observe(on_value_changed(scalar), 'maxvalue')
+ editor.observe(on_value_changed(scalar), 'precision')
+ editor.observe(on_value_changed(scalar), 'step')
+
editor.observe(on_value_changed(scalar), 'value')
editors.append(editor)
@@ -93,7 +110,7 @@ def fn(change):
w, h = lsw.size_display
if len(editors):
return HBox((
- HBox([lsw], layout=Layout(margin='10px', min_width=str(w)+'px', min_height=str(h)+'px')),
+ HBox([lsw], layout=Layout(margin='10px', min_width=str(w) + 'px', min_height=str(h) + 'px')),
HBox(editors, layout=Layout(margin='0', flex_flow='row wrap'))
))
@@ -104,6 +121,8 @@ def fn(change):
@argument('file', type=str, help='L-Py file path')
@argument('--size', '-s', default='400,400', type=str, help='Width and hight of the canvas')
@argument('--cell', '-c', default=1., type=float, help='Size of cell for a single derivation step')
+ @argument('--derive', '-d', default='0,0,1', type=str, help='L-py derivation start, stop and step \
+ (stop = derivationLength if not defined or 0)')
def lpy_plot(self, line):
from math import ceil, sqrt, floor
@@ -116,25 +135,34 @@ def lpy_plot(self, line):
args = parse_argstring(self.lpy_plot, line)
file = args.file
sizes = [int(i.strip()) for i in args.size.split(',')]
+ derive = [int(i.strip()) for i in args.derive.split(',')]
cell = args.cell
size_display = (int(sizes[0]), int(sizes[1])) if len(sizes) > 1 else (int(sizes[0]), int(sizes[0]))
- ls = Lsystem(file)
- rows = cols = ceil(sqrt(ls.derivationLength + 1))
+ ls = lpy.Lsystem(file)
+ if len(derive) == 1:
+ derive = derive + [ls.derivationLength, 1]
+ elif len(derive) == 2:
+ derive = derive + [1]
+ derive[1] = ls.derivationLength if derive[1] == 0 else derive[1]
+ assert derive[0] < derive[1] and derive[2] < derive[1]
+ steps = list(range(*derive))
+ rows = cols = ceil(sqrt(len(steps) + 1))
size = rows * cell
- start = -size/2 + cell/2
+ start = -size / 2 + cell / 2
sw = SceneWidget(size_display=size_display, size_world=size)
sw.add(ls.sceneInterpretation(ls.axiom), position=(start, start, 0))
def plot():
tree = ls.axiom
- for i in range(1, ls.derivationLength):
+ for i in range(len(steps)):
row = floor(i / rows)
col = (i - row * cols)
x = row * cell + start
y = col * cell + start
- tree = ls.derive(tree, i, 1)
+ while ls.getLastIterationNb() < steps[i]:
+ tree = ls.derive(tree, ls.getLastIterationNb() + 1, 1)
sw.add(ls.sceneInterpretation(tree), (x, y, 0))
ip.events.unregister('post_run_cell', plot)
diff --git a/pgljupyter/tests/__init__.py b/pgljupyter/tests/__init__.py
deleted file mode 100644
index e69de29..0000000
diff --git a/pgljupyter/tests/conftest.py b/pgljupyter/tests/conftest.py
deleted file mode 100644
index 6130c01..0000000
--- a/pgljupyter/tests/conftest.py
+++ /dev/null
@@ -1,48 +0,0 @@
-import pytest
-
-from ipykernel.comm import Comm
-from ipywidgets import Widget
-
-class MockComm(Comm):
- """A mock Comm object.
-
- Can be used to inspect calls to Comm's open/send/close methods.
- """
- comm_id = 'a-b-c-d'
- kernel = 'Truthy'
-
- def __init__(self, *args, **kwargs):
- self.log_open = []
- self.log_send = []
- self.log_close = []
- super(MockComm, self).__init__(*args, **kwargs)
-
- def open(self, *args, **kwargs):
- self.log_open.append((args, kwargs))
-
- def send(self, *args, **kwargs):
- self.log_send.append((args, kwargs))
-
- def close(self, *args, **kwargs):
- self.log_close.append((args, kwargs))
-
-_widget_attrs = {}
-undefined = object()
-
-
-@pytest.fixture
-def mock_comm():
- _widget_attrs['_comm_default'] = getattr(Widget, '_comm_default', undefined)
- Widget._comm_default = lambda self: MockComm()
- _widget_attrs['_ipython_display_'] = Widget._ipython_display_
- def raise_not_implemented(*args, **kwargs):
- raise NotImplementedError()
- Widget._ipython_display_ = raise_not_implemented
-
- yield MockComm()
-
- for attr, value in _widget_attrs.items():
- if value is undefined:
- delattr(Widget, attr)
- else:
- setattr(Widget, attr, value)
diff --git a/pgljupyter/tests/test_example.py b/pgljupyter/tests/test_example.py
deleted file mode 100644
index 2490573..0000000
--- a/pgljupyter/tests/test_example.py
+++ /dev/null
@@ -1,8 +0,0 @@
-import pytest
-
-from ..widget import SceneWidget
-
-
-def test_example_creation_blank():
- w = SceneWidget()
- assert w.plane == True
diff --git a/pgljupyter/tests/test_nbextension_path.py b/pgljupyter/tests/test_nbextension_path.py
deleted file mode 100644
index 539a61a..0000000
--- a/pgljupyter/tests/test_nbextension_path.py
+++ /dev/null
@@ -1,8 +0,0 @@
-def test_nbextension_path():
- # Check that magic function can be imported from package root:
- from pgljupyter import _jupyter_nbextension_paths
- # Ensure that it can be called without incident:
- path = _jupyter_nbextension_paths()
- # Some sanity checks:
- assert len(path) == 1
- assert isinstance(path[0], dict)
diff --git a/pgljupyter/widgets.py b/pgljupyter/widgets.py
index 8f67463..09bbc8c 100644
--- a/pgljupyter/widgets.py
+++ b/pgljupyter/widgets.py
@@ -120,7 +120,7 @@ def __init__(self, obj=None, position=(0.0, 0.0, 0.0), scale=1.0, **kwargs):
'data': serialized,
'scene': scene,
'position': position,
- 'scale': scale
+ 'scale': scale
}]
super().__init__(**kwargs)
@@ -136,7 +136,7 @@ def add(self, obj, position=(0, 0, 0), scale=1.0):
'data': serialized,
'scene': scene,
'position': position,
- 'scale': scale
+ 'scale': scale
})
self.send_state('scenes')
@@ -156,7 +156,7 @@ def set_scenes(self, objs, positions=(0., 0., 0.), scales=1.):
'data': serialized,
'scene': scene,
'position': positions[i] if type(positions) == list else positions,
- 'scale': scales[i] if type(scales) == list else scales
+ 'scale': scales[i] if type(scales) == list else scales
})
self.scenes = scenes
diff --git a/pyproject.toml b/pyproject.toml
new file mode 100644
index 0000000..a3ea1be
--- /dev/null
+++ b/pyproject.toml
@@ -0,0 +1,17 @@
+[build-system]
+requires = ["jupyter_packaging~=0.10,<2", "jupyterlab~=3.4"]
+build-backend = "jupyter_packaging.build_api"
+
+[tool.jupyter-packaging.options]
+skip-if-exists = ["pgljupyter/labextension/static/style.js"]
+ensured-targets = ["pgljupyter/labextension/static/style.js", "pgljupyter/labextension/package.json"]
+
+[tool.jupyter-packaging.builder]
+factory = "jupyter_packaging.npm_builder"
+
+[tool.jupyter-packaging.build-args]
+build_cmd = "build:prod"
+npm = ["jlpm"]
+
+[tool.check-manifest]
+ignore = ["pgljupyter/labextension/**", "yarn.lock", ".*", "package-lock.json"]
diff --git a/pytest.ini b/pytest.ini
deleted file mode 100644
index f06ab64..0000000
--- a/pytest.ini
+++ /dev/null
@@ -1,4 +0,0 @@
-[pytest]
-testpaths = pgljupyter/tests examples
-norecursedirs = node_modules .ipynb_checkpoints
-addopts = --nbval --current-env
diff --git a/readthedocs.yml b/readthedocs.yml
deleted file mode 100644
index c972d9c..0000000
--- a/readthedocs.yml
+++ /dev/null
@@ -1,9 +0,0 @@
-type: sphinx
-python:
- version: 3.5
- pip_install: true
- extra_requirements:
- - examples
- - docs
-conda:
- file: docs/environment.yml
diff --git a/setup.cfg b/setup.cfg
index d085b61..e44b810 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,6 +1,2 @@
-[bdist_wheel]
-universal=1
-
-[metadata]
-description-file = README.md
-license_file = LICENSE.txt
+[flake8]
+ignore = E501
diff --git a/setup.py b/setup.py
index 9c23fe3..132d989 100644
--- a/setup.py
+++ b/setup.py
@@ -1,115 +1,93 @@
-#!/usr/bin/env python
-# coding: utf-8
+import json
+import sys
+from pathlib import Path
-# Copyright (c) Jupyter Development Team.
-# Distributed under the terms of the Modified BSD License.
+import setuptools
-from __future__ import print_function
-from glob import glob
-from os.path import join as pjoin
-
-
-from setupbase import (
- create_cmdclass, install_npm, ensure_targets,
- find_packages, combine_commands, ensure_python,
- get_version, HERE
-)
-
-from setuptools import setup
+HERE = Path(__file__).parent.resolve()
+# Get the package info from package.json
+pkg_json = json.loads((HERE / "package.json").read_bytes())
# The name of the project
-name = 'pgljupyter'
+name = "pgljupyter"
-# Ensure a valid python version
-ensure_python('>=3.7')
-
-# Get our version
-version = get_version(pjoin(name, '_version.py'))
-
-nb_path = pjoin(HERE, name, 'nbextension', 'static')
-lab_path = pjoin(HERE, name, 'labextension')
+lab_path = (HERE / pkg_json["jupyterlab"]["outputDir"])
# Representative files that should exist after a successful build
-jstargets = [
- pjoin(nb_path, 'index.js'),
- pjoin(HERE, 'lib', 'labplugin.js'),
+ensured_targets = [
+ str(lab_path / "package.json"),
+ str(lab_path / "static/style.js")
]
-package_data_spec = {
- name: [
- 'nbextension/static/*.*js*',
- 'labextension/*.tgz'
- ]
-}
+labext_name = pkg_json["name"]
data_files_spec = [
- ('share/jupyter/nbextensions/pgljupyter',
- nb_path, '*.js*'),
- ('share/jupyter/lab/extensions', lab_path, '*.tgz'),
- ('etc/jupyter/nbconfig/notebook.d', HERE, 'pgljupyter.json')
+ ("share/jupyter/labextensions/%s" % labext_name, str(lab_path.relative_to(HERE)), "**"),
+ ("share/jupyter/labextensions/%s" % labext_name, str("."), "install.json"),
]
-cmdclass = create_cmdclass(
- 'jsdeps',
- package_data_spec=package_data_spec,
- data_files_spec=data_files_spec
-)
+long_description = (HERE / "README.md").read_text()
-cmdclass['jsdeps'] = combine_commands(
- install_npm(HERE, build_cmd='build:all'),
- ensure_targets(jstargets),
+version = (
+ pkg_json["version"]
+ .replace("-alpha.", "a")
+ .replace("-beta.", "b")
+ .replace("-rc.", "rc")
)
setup_args = dict(
name=name,
- description='PlantGL jupyter widget',
version=version,
- scripts=glob(pjoin('scripts', '*')),
- cmdclass=cmdclass,
- packages=find_packages(),
- author='Jan Vaillant',
- author_email='jan.vaillant@cirad.fr',
- url='https://github.com/jvail/plantgl-jupyter',
- license='Cecill',
- platforms="Linux, Mac OS X, Windows",
- keywords=['Jupyter', 'Widgets', 'IPython', 'L-Py', 'PlantGL'],
- classifiers=[
- 'Intended Audience :: Developers',
- 'Intended Audience :: Science/Research',
- 'Programming Language :: Python',
- 'Programming Language :: Python :: 3.7',
- 'Programming Language :: Python :: 3.8',
- 'Programming Language :: Python :: 3.9',
- 'Framework :: Jupyter',
+ url=pkg_json["homepage"],
+ description=pkg_json["description"],
+ license=pkg_json["license"],
+ license_file="LICENSE",
+ long_description=long_description,
+ long_description_content_type="text/markdown",
+ packages=setuptools.find_packages(),
+ install_requires=[
+ 'openalea.lpy>=3.9.0,<4.0.0',
+ 'openalea.plantgl>=3.14.0,<4.0.0'
],
+ zip_safe=False,
include_package_data=True,
- install_requires=[
- 'ipython>=7.0.0',
- 'jupyterlab>=3.0.0',
- 'ipywidgets>=7.5.0',
- 'openalea.lpy>=3.8.0,<4.0.0',
- 'openalea.plantgl>=3.10.0,<4.0.0'
+ python_requires=">=3.7",
+ platforms="Linux, Mac OS X, Windows",
+ keywords=["Jupyter", "JupyterLab", "JupyterLab3"],
+ classifiers=[
+ "License :: OSI Approved :: BSD License",
+ "Programming Language :: Python",
+ "Programming Language :: Python :: 3",
+ "Programming Language :: Python :: 3.7",
+ "Programming Language :: Python :: 3.8",
+ "Programming Language :: Python :: 3.9",
+ "Programming Language :: Python :: 3.10",
+ "Framework :: Jupyter",
+ "Framework :: Jupyter :: JupyterLab",
+ "Framework :: Jupyter :: JupyterLab :: 3",
+ "Framework :: Jupyter :: JupyterLab :: Extensions",
+ "Framework :: Jupyter :: JupyterLab :: Extensions :: Prebuilt",
],
- python_requires='>=3.7',
- extras_require={
- 'test': [],
- 'examples': [
- # Any requirements for the examples to run
- ],
- 'docs': [
- 'sphinx>=1.5',
- 'recommonmark',
- 'sphinx_rtd_theme',
- 'nbsphinx>=0.2.13,<0.4.0',
- 'jupyter_sphinx',
- 'nbsphinx-link',
- 'pytest_check_links',
- 'pypandoc',
- ],
- },
- entry_points={}
)
-if __name__ == '__main__':
- setup(**setup_args)
+try:
+ from jupyter_packaging import (
+ wrap_installers,
+ npm_builder,
+ get_data_files
+ )
+ post_develop = npm_builder(
+ build_cmd="install:extension", source_dir="src", build_dir=lab_path
+ )
+ setup_args["cmdclass"] = wrap_installers(post_develop=post_develop, ensured_targets=ensured_targets)
+ setup_args["data_files"] = get_data_files(data_files_spec)
+except ImportError as e:
+ import logging
+ logging.basicConfig(format="%(levelname)s: %(message)s")
+ logging.warning("Build tool `jupyter-packaging` is missing. Install it with pip or conda.")
+ if not ("--name" in sys.argv or "--version" in sys.argv):
+ raise e
+
+if __name__ == "__main__":
+ setuptools.setup(**setup_args)
diff --git a/setupbase.py b/setupbase.py
deleted file mode 100644
index b0792ea..0000000
--- a/setupbase.py
+++ /dev/null
@@ -1,718 +0,0 @@
-#!/usr/bin/env python
-# coding: utf-8
-
-# Copyright (c) Jupyter Development Team.
-# Distributed under the terms of the Modified BSD License.
-
-"""
-This file originates from the 'jupyter-packaging' package, and
-contains a set of useful utilities for including npm packages
-within a Python package.
-"""
-from collections import defaultdict
-from os.path import join as pjoin
-import io
-import os
-import functools
-import pipes
-import re
-import shlex
-import subprocess
-import sys
-
-
-# BEFORE importing distutils, remove MANIFEST. distutils doesn't properly
-# update it when the contents of directories change.
-if os.path.exists('MANIFEST'): os.remove('MANIFEST')
-
-
-from distutils.cmd import Command
-from distutils.command.build_py import build_py
-from distutils.command.sdist import sdist
-from distutils import log
-
-from setuptools.command.develop import develop
-from setuptools.command.bdist_egg import bdist_egg
-
-try:
- from wheel.bdist_wheel import bdist_wheel
-except ImportError:
- bdist_wheel = None
-
-if sys.platform == 'win32':
- from subprocess import list2cmdline
-else:
- def list2cmdline(cmd_list):
- return ' '.join(map(pipes.quote, cmd_list))
-
-
-__version__ = '0.2.0'
-
-# ---------------------------------------------------------------------------
-# Top Level Variables
-# ---------------------------------------------------------------------------
-
-HERE = os.path.abspath(os.path.dirname(__file__))
-is_repo = os.path.exists(pjoin(HERE, '.git'))
-node_modules = pjoin(HERE, 'node_modules')
-
-SEPARATORS = os.sep if os.altsep is None else os.sep + os.altsep
-
-npm_path = ':'.join([
- pjoin(HERE, 'node_modules', '.bin'),
- os.environ.get('PATH', os.defpath),
-])
-
-if "--skip-npm" in sys.argv:
- print("Skipping npm install as requested.")
- skip_npm = True
- sys.argv.remove("--skip-npm")
-else:
- skip_npm = False
-
-
-# ---------------------------------------------------------------------------
-# Public Functions
-# ---------------------------------------------------------------------------
-
-def get_version(file, name='__version__'):
- """Get the version of the package from the given file by
- executing it and extracting the given `name`.
- """
- path = os.path.realpath(file)
- version_ns = {}
- with io.open(path, encoding="utf8") as f:
- exec(f.read(), {}, version_ns)
- return version_ns[name]
-
-
-def ensure_python(specs):
- """Given a list of range specifiers for python, ensure compatibility.
- """
- if not isinstance(specs, (list, tuple)):
- specs = [specs]
- v = sys.version_info
- part = '%s.%s' % (v.major, v.minor)
- for spec in specs:
- if part == spec:
- return
- try:
- if eval(part + spec):
- return
- except SyntaxError:
- pass
- raise ValueError('Python version %s unsupported' % part)
-
-
-def find_packages(top=HERE):
- """
- Find all of the packages.
- """
- packages = []
- for d, dirs, _ in os.walk(top, followlinks=True):
- if os.path.exists(pjoin(d, '__init__.py')):
- packages.append(os.path.relpath(d, top).replace(os.path.sep, '.'))
- elif d != top:
- # Do not look for packages in subfolders if current is not a package
- dirs[:] = []
- return packages
-
-
-def update_package_data(distribution):
- """update build_py options to get package_data changes"""
- build_py = distribution.get_command_obj('build_py')
- build_py.finalize_options()
-
-
-class bdist_egg_disabled(bdist_egg):
- """Disabled version of bdist_egg
-
- Prevents setup.py install performing setuptools' default easy_install,
- which it should never ever do.
- """
- def run(self):
- sys.exit("Aborting implicit building of eggs. Use `pip install .` "
- " to install from source.")
-
-
-def create_cmdclass(prerelease_cmd=None, package_data_spec=None,
- data_files_spec=None):
- """Create a command class with the given optional prerelease class.
-
- Parameters
- ----------
- prerelease_cmd: (name, Command) tuple, optional
- The command to run before releasing.
- package_data_spec: dict, optional
- A dictionary whose keys are the dotted package names and
- whose values are a list of glob patterns.
- data_files_spec: list, optional
- A list of (path, dname, pattern) tuples where the path is the
- `data_files` install path, dname is the source directory, and the
- pattern is a glob pattern.
-
- Notes
- -----
- We use specs so that we can find the files *after* the build
- command has run.
-
- The package data glob patterns should be relative paths from the package
- folder containing the __init__.py file, which is given as the package
- name.
- e.g. `dict(foo=['./bar/*', './baz/**'])`
-
- The data files directories should be absolute paths or relative paths
- from the root directory of the repository. Data files are specified
- differently from `package_data` because we need a separate path entry
- for each nested folder in `data_files`, and this makes it easier to
- parse.
- e.g. `('share/foo/bar', 'pkgname/bizz, '*')`
- """
- wrapped = [prerelease_cmd] if prerelease_cmd else []
- if package_data_spec or data_files_spec:
- wrapped.append('handle_files')
- wrapper = functools.partial(_wrap_command, wrapped)
- handle_files = _get_file_handler(package_data_spec, data_files_spec)
-
- if 'bdist_egg' in sys.argv:
- egg = wrapper(bdist_egg, strict=True)
- else:
- egg = bdist_egg_disabled
-
- cmdclass = dict(
- build_py=wrapper(build_py, strict=is_repo),
- bdist_egg=egg,
- sdist=wrapper(sdist, strict=True),
- handle_files=handle_files,
- )
-
- if bdist_wheel:
- cmdclass['bdist_wheel'] = wrapper(bdist_wheel, strict=True)
-
- cmdclass['develop'] = wrapper(develop, strict=True)
- return cmdclass
-
-
-def command_for_func(func):
- """Create a command that calls the given function."""
-
- class FuncCommand(BaseCommand):
-
- def run(self):
- func()
- update_package_data(self.distribution)
-
- return FuncCommand
-
-
-def run(cmd, **kwargs):
- """Echo a command before running it. Defaults to repo as cwd"""
- log.info('> ' + list2cmdline(cmd))
- kwargs.setdefault('cwd', HERE)
- kwargs.setdefault('shell', os.name == 'nt')
- if not isinstance(cmd, (list, tuple)) and os.name != 'nt':
- cmd = shlex.split(cmd)
- cmd_path = which(cmd[0])
- if not cmd_path:
- sys.exit("Aborting. Could not find cmd (%s) in path. "
- "If command is not expected to be in user's path, "
- "use an absolute path." % cmd[0])
- cmd[0] = cmd_path
- return subprocess.check_call(cmd, **kwargs)
-
-
-def is_stale(target, source):
- """Test whether the target file/directory is stale based on the source
- file/directory.
- """
- if not os.path.exists(target):
- return True
- target_mtime = recursive_mtime(target) or 0
- return compare_recursive_mtime(source, cutoff=target_mtime)
-
-
-class BaseCommand(Command):
- """Empty command because Command needs subclasses to override too much"""
- user_options = []
-
- def initialize_options(self):
- pass
-
- def finalize_options(self):
- pass
-
- def get_inputs(self):
- return []
-
- def get_outputs(self):
- return []
-
-
-def combine_commands(*commands):
- """Return a Command that combines several commands."""
-
- class CombinedCommand(Command):
- user_options = []
-
- def initialize_options(self):
- self.commands = []
- for C in commands:
- self.commands.append(C(self.distribution))
- for c in self.commands:
- c.initialize_options()
-
- def finalize_options(self):
- for c in self.commands:
- c.finalize_options()
-
- def run(self):
- for c in self.commands:
- c.run()
- return CombinedCommand
-
-
-def compare_recursive_mtime(path, cutoff, newest=True):
- """Compare the newest/oldest mtime for all files in a directory.
-
- Cutoff should be another mtime to be compared against. If an mtime that is
- newer/older than the cutoff is found it will return True.
- E.g. if newest=True, and a file in path is newer than the cutoff, it will
- return True.
- """
- if os.path.isfile(path):
- mt = mtime(path)
- if newest:
- if mt > cutoff:
- return True
- elif mt < cutoff:
- return True
- for dirname, _, filenames in os.walk(path, topdown=False):
- for filename in filenames:
- mt = mtime(pjoin(dirname, filename))
- if newest: # Put outside of loop?
- if mt > cutoff:
- return True
- elif mt < cutoff:
- return True
- return False
-
-
-def recursive_mtime(path, newest=True):
- """Gets the newest/oldest mtime for all files in a directory."""
- if os.path.isfile(path):
- return mtime(path)
- current_extreme = None
- for dirname, dirnames, filenames in os.walk(path, topdown=False):
- for filename in filenames:
- mt = mtime(pjoin(dirname, filename))
- if newest: # Put outside of loop?
- if mt >= (current_extreme or mt):
- current_extreme = mt
- elif mt <= (current_extreme or mt):
- current_extreme = mt
- return current_extreme
-
-
-def mtime(path):
- """shorthand for mtime"""
- return os.stat(path).st_mtime
-
-
-def install_npm(path=None, build_dir=None, source_dir=None, build_cmd='build', force=False, npm=None):
- """Return a Command for managing an npm installation.
-
- Note: The command is skipped if the `--skip-npm` flag is used.
-
- Parameters
- ----------
- path: str, optional
- The base path of the node package. Defaults to the repo root.
- build_dir: str, optional
- The target build directory. If this and source_dir are given,
- the JavaScript will only be build if necessary.
- source_dir: str, optional
- The source code directory.
- build_cmd: str, optional
- The npm command to build assets to the build_dir.
- npm: str or list, optional.
- The npm executable name, or a tuple of ['node', executable].
- """
-
- class NPM(BaseCommand):
- description = 'install package.json dependencies using npm'
-
- def run(self):
- if skip_npm:
- log.info('Skipping npm-installation')
- return
- node_package = path or HERE
- node_modules = pjoin(node_package, 'node_modules')
- is_yarn = os.path.exists(pjoin(node_package, 'yarn.lock'))
-
- npm_cmd = npm
-
- if npm is None:
- if is_yarn:
- npm_cmd = ['yarn']
- else:
- npm_cmd = ['npm']
-
- if not which(npm_cmd[0]):
- log.error("`{0}` unavailable. If you're running this command "
- "using sudo, make sure `{0}` is available to sudo"
- .format(npm_cmd[0]))
- return
-
- if force or is_stale(node_modules, pjoin(node_package, 'package.json')):
- log.info('Installing build dependencies with npm. This may '
- 'take a while...')
- run(npm_cmd + ['install'], cwd=node_package)
- if build_dir and source_dir and not force:
- should_build = is_stale(build_dir, source_dir)
- else:
- should_build = True
- if should_build:
- run(npm_cmd + ['run', build_cmd], cwd=node_package)
-
- return NPM
-
-
-def ensure_targets(targets):
- """Return a Command that checks that certain files exist.
-
- Raises a ValueError if any of the files are missing.
-
- Note: The check is skipped if the `--skip-npm` flag is used.
- """
-
- class TargetsCheck(BaseCommand):
- def run(self):
- if skip_npm:
- log.info('Skipping target checks')
- return
- missing = [t for t in targets if not os.path.exists(t)]
- if missing:
- raise ValueError(('missing files: %s' % missing))
-
- return TargetsCheck
-
-
-# `shutils.which` function copied verbatim from the Python-3.3 source.
-def which(cmd, mode=os.F_OK | os.X_OK, path=None):
- """Given a command, mode, and a PATH string, return the path which
- conforms to the given mode on the PATH, or None if there is no such
- file.
- `mode` defaults to os.F_OK | os.X_OK. `path` defaults to the result
- of os.environ.get("PATH"), or can be overridden with a custom search
- path.
- """
-
- # Check that a given file can be accessed with the correct mode.
- # Additionally check that `file` is not a directory, as on Windows
- # directories pass the os.access check.
- def _access_check(fn, mode):
- return (os.path.exists(fn) and os.access(fn, mode) and
- not os.path.isdir(fn))
-
- # Short circuit. If we're given a full path which matches the mode
- # and it exists, we're done here.
- if _access_check(cmd, mode):
- return cmd
-
- path = (path or os.environ.get("PATH", os.defpath)).split(os.pathsep)
-
- if sys.platform == "win32":
- # The current directory takes precedence on Windows.
- if os.curdir not in path:
- path.insert(0, os.curdir)
-
- # PATHEXT is necessary to check on Windows.
- pathext = os.environ.get("PATHEXT", "").split(os.pathsep)
- # See if the given file matches any of the expected path extensions.
- # This will allow us to short circuit when given "python.exe".
- matches = [cmd for ext in pathext if cmd.lower().endswith(ext.lower())]
- # If it does match, only test that one, otherwise we have to try
- # others.
- files = [cmd] if matches else [cmd + ext.lower() for ext in pathext]
- else:
- # On other platforms you don't have things like PATHEXT to tell you
- # what file suffixes are executable, so just pass on cmd as-is.
- files = [cmd]
-
- seen = set()
- for dir in path:
- dir = os.path.normcase(dir)
- if dir not in seen:
- seen.add(dir)
- for thefile in files:
- name = os.path.join(dir, thefile)
- if _access_check(name, mode):
- return name
- return None
-
-
-# ---------------------------------------------------------------------------
-# Private Functions
-# ---------------------------------------------------------------------------
-
-
-def _wrap_command(cmds, cls, strict=True):
- """Wrap a setup command
-
- Parameters
- ----------
- cmds: list(str)
- The names of the other commands to run prior to the command.
- strict: boolean, optional
- Wether to raise errors when a pre-command fails.
- """
- class WrappedCommand(cls):
-
- def run(self):
- if not getattr(self, 'uninstall', None):
- try:
- [self.run_command(cmd) for cmd in cmds]
- except Exception:
- if strict:
- raise
- else:
- pass
- # update package data
- update_package_data(self.distribution)
-
- result = cls.run(self)
- return result
- return WrappedCommand
-
-
-def _get_file_handler(package_data_spec, data_files_spec):
- """Get a package_data and data_files handler command.
- """
- class FileHandler(BaseCommand):
-
- def run(self):
- package_data = self.distribution.package_data
- package_spec = package_data_spec or dict()
-
- for (key, patterns) in package_spec.items():
- package_data[key] = _get_package_data(key, patterns)
-
- self.distribution.data_files = _get_data_files(
- data_files_spec, self.distribution.data_files
- )
-
- return FileHandler
-
-
-def _glob_pjoin(*parts):
- """Join paths for glob processing"""
- if parts[0] in ('.', ''):
- parts = parts[1:]
- return pjoin(*parts).replace(os.sep, '/')
-
-
-def _get_data_files(data_specs, existing, top=HERE):
- """Expand data file specs into valid data files metadata.
-
- Parameters
- ----------
- data_specs: list of tuples
- See [create_cmdclass] for description.
- existing: list of tuples
- The existing distrubution data_files metadata.
-
- Returns
- -------
- A valid list of data_files items.
- """
- # Extract the existing data files into a staging object.
- file_data = defaultdict(list)
- for (path, files) in existing or []:
- file_data[path] = files
-
- # Extract the files and assign them to the proper data
- # files path.
- for (path, dname, pattern) in data_specs or []:
- if os.path.isabs(dname):
- dname = os.path.relpath(dname, top)
- dname = dname.replace(os.sep, '/')
- offset = 0 if dname in ('.', '') else len(dname) + 1
- files = _get_files(_glob_pjoin(dname, pattern), top=top)
- for fname in files:
- # Normalize the path.
- root = os.path.dirname(fname)
- full_path = _glob_pjoin(path, root[offset:])
- print(dname, root, full_path, offset)
- if full_path.endswith('/'):
- full_path = full_path[:-1]
- file_data[full_path].append(fname)
-
- # Construct the data files spec.
- data_files = []
- for (path, files) in file_data.items():
- data_files.append((path, files))
- return data_files
-
-
-def _get_files(file_patterns, top=HERE):
- """Expand file patterns to a list of paths.
-
- Parameters
- -----------
- file_patterns: list or str
- A list of glob patterns for the data file locations.
- The globs can be recursive if they include a `**`.
- They should be relative paths from the top directory or
- absolute paths.
- top: str
- the directory to consider for data files
-
- Note:
- Files in `node_modules` are ignored.
- """
- if not isinstance(file_patterns, (list, tuple)):
- file_patterns = [file_patterns]
-
- for i, p in enumerate(file_patterns):
- if os.path.isabs(p):
- file_patterns[i] = os.path.relpath(p, top)
-
- matchers = [_compile_pattern(p) for p in file_patterns]
-
- files = set()
-
- for root, dirnames, filenames in os.walk(top):
- # Don't recurse into node_modules
- if 'node_modules' in dirnames:
- dirnames.remove('node_modules')
- for m in matchers:
- for filename in filenames:
- fn = os.path.relpath(_glob_pjoin(root, filename), top)
- fn = fn.replace(os.sep, '/')
- if m(fn):
- files.add(fn.replace(os.sep, '/'))
-
- return list(files)
-
-
-def _get_package_data(root, file_patterns=None):
- """Expand file patterns to a list of `package_data` paths.
-
- Parameters
- -----------
- root: str
- The relative path to the package root from `HERE`.
- file_patterns: list or str, optional
- A list of glob patterns for the data file locations.
- The globs can be recursive if they include a `**`.
- They should be relative paths from the root or
- absolute paths. If not given, all files will be used.
-
- Note:
- Files in `node_modules` are ignored.
- """
- if file_patterns is None:
- file_patterns = ['*']
- return _get_files(file_patterns, _glob_pjoin(HERE, root))
-
-
-def _compile_pattern(pat, ignore_case=True):
- """Translate and compile a glob pattern to a regular expression matcher."""
- if isinstance(pat, bytes):
- pat_str = pat.decode('ISO-8859-1')
- res_str = _translate_glob(pat_str)
- res = res_str.encode('ISO-8859-1')
- else:
- res = _translate_glob(pat)
- flags = re.IGNORECASE if ignore_case else 0
- return re.compile(res, flags=flags).match
-
-
-def _iexplode_path(path):
- """Iterate over all the parts of a path.
-
- Splits path recursively with os.path.split().
- """
- (head, tail) = os.path.split(path)
- if not head or (not tail and head == path):
- if head:
- yield head
- if tail or not head:
- yield tail
- return
- for p in _iexplode_path(head):
- yield p
- yield tail
-
-
-def _translate_glob(pat):
- """Translate a glob PATTERN to a regular expression."""
- translated_parts = []
- for part in _iexplode_path(pat):
- translated_parts.append(_translate_glob_part(part))
- os_sep_class = '[%s]' % re.escape(SEPARATORS)
- res = _join_translated(translated_parts, os_sep_class)
- return '{res}\\Z(?ms)'.format(res=res)
-
-
-def _join_translated(translated_parts, os_sep_class):
- """Join translated glob pattern parts.
-
- This is different from a simple join, as care need to be taken
- to allow ** to match ZERO or more directories.
- """
- res = ''
- for part in translated_parts[:-1]:
- if part == '.*':
- # drop separator, since it is optional
- # (** matches ZERO or more dirs)
- res += part
- else:
- res += part + os_sep_class
-
- if translated_parts[-1] == '.*':
- # Final part is **
- res += '.+'
- # Follow stdlib/git convention of matching all sub files/directories:
- res += '({os_sep_class}?.*)?'.format(os_sep_class=os_sep_class)
- else:
- res += translated_parts[-1]
- return res
-
-
-def _translate_glob_part(pat):
- """Translate a glob PATTERN PART to a regular expression."""
- # Code modified from Python 3 standard lib fnmatch:
- if pat == '**':
- return '.*'
- i, n = 0, len(pat)
- res = []
- while i < n:
- c = pat[i]
- i = i + 1
- if c == '*':
- # Match anything but path separators:
- res.append('[^%s]*' % SEPARATORS)
- elif c == '?':
- res.append('[^%s]?' % SEPARATORS)
- elif c == '[':
- j = i
- if j < n and pat[j] == '!':
- j = j + 1
- if j < n and pat[j] == ']':
- j = j + 1
- while j < n and pat[j] != ']':
- j = j + 1
- if j >= n:
- res.append('\\[')
- else:
- stuff = pat[i:j].replace('\\', '\\\\')
- i = j + 1
- if stuff[0] == '!':
- stuff = '^' + stuff[1:]
- elif stuff[0] == '^':
- stuff = '\\' + stuff
- res.append('[%s]' % stuff)
- else:
- res.append(re.escape(c))
- return ''.join(res)
diff --git a/src/index.ts b/src/index.ts
index 7b3743e..a487e13 100644
--- a/src/index.ts
+++ b/src/index.ts
@@ -3,3 +3,4 @@ export * from './widgets/geom';
export * from './widgets/widgets';
export * from './widgets/editors';
export * from './widgets/models';
+export * from './labplugin';
diff --git a/src/labplugin.ts b/src/labplugin.ts
index 5186a32..5c6d32f 100644
--- a/src/labplugin.ts
+++ b/src/labplugin.ts
@@ -59,7 +59,8 @@ const registerGeomFileType = (app: JupyterFrontEnd, mimeRegistry: IRenderMimeReg
primaryFileType: app.docRegistry.getFileType(option.primaryFileType),
fileTypes: option.fileTypes,
defaultFor: option.defaultFor,
- defaultRendered: option.defaultRendered
+ defaultRendered: option.defaultRendered,
+
});
app.docRegistry.addWidgetFactory(factory);
};
diff --git a/src/pgljs/plantgl b/src/pgljs/plantgl
index 7ea1add..f31d333 160000
--- a/src/pgljs/plantgl
+++ b/src/pgljs/plantgl
@@ -1 +1 @@
-Subproject commit 7ea1add383b36306dad49fba38e34adf48b80d44
+Subproject commit f31d333670dc5d465ab897e5c8b24020e15cc5fd
diff --git a/src/widgets/controls.ts b/src/widgets/controls.ts
index 153fdcb..e5fa834 100644
--- a/src/widgets/controls.ts
+++ b/src/widgets/controls.ts
@@ -1,5 +1,5 @@
import { render, html } from 'lit-html';
-import { styleMap } from 'lit-html/directives/style-map'
+import { styleMap } from 'lit-html/directives/style-map.js';
import '@material/mwc-switch';
import '@material/mwc-formfield';
import '@material/mwc-icon-button-toggle';
@@ -52,12 +52,13 @@ export class PGLControls {
handlers.onCaptureVideoClicked(evt.target.on)}
style=${styleMap(('MediaRecorder' in window) && (state.capturingVideo || (state.showHeader && !state.showControls)) ? { 'display': 'inline', 'float': 'left' } : { 'display': 'none' })}>
state.showControls = !state.showControls}
style=${styleMap(state.showControls || state.showHeader ? { 'display': 'inline' } : { 'display': 'none' })}>
@@ -65,22 +66,22 @@ export class PGLControls {
- handlers.onFullscreenToggled(evt.target.checked)} ?checked=${state.fullscreen}>
+ handlers.onFullscreenToggled()} ?selected=${state.fullscreen}>
- handlers.onAutoRotateToggled(evt.target.checked)} ?checked=${state.autoRotate}>
+ handlers.onAutoRotateToggled(evt.target.selected)} ?selected=${state.autoRotate}>
- handlers.onPlaneToggled(evt.target.checked)} ?checked=${state.plane}>
+ handlers.onPlaneToggled(evt.target.selected)} ?selected=${state.plane}>
handlers.onFlatShadingToggled(evt.target.checked)} ?checked=${state.flatShading}>
+ @click=${(evt) => handlers.onFlatShadingToggled(evt.target.selected)} ?selected=${state.flatShading}>
handlers.onWireframeToggled(evt.target.checked)} ?checked=${state.wireframe}>
+ @click=${(evt) => handlers.onWireframeToggled(evt.target.selected)} ?selected=${state.wireframe}>
`;
diff --git a/src/widgets/editors.ts b/src/widgets/editors.ts
index 1553406..51fe9b2 100644
--- a/src/widgets/editors.ts
+++ b/src/widgets/editors.ts
@@ -210,21 +210,23 @@ export class _CurveEditorView extends DOMWidgetView {
const drag = () => {
+ const editor = this;
circles.on('.drag', null);
- circles.call( // @ts-ignore
- d3.drag().on('drag', (d, i) => {
- const tx = d3.event.x + dx;
- const ty = d3.event.y + dy;
+ circles.call(
+ d3.drag().on('drag', function (event: any, d) {
+ const i = circles.nodes().indexOf(this);
+ const tx = event.x + dx;
+ const ty = event.y + dy;
if (tx > width - margin || tx < margin || ty > height - margin || ty < margin) {
return;
}
- const x = isFunction && (i === 0 || i === this.controlPoints.length - 1) ? this.controlPoints[i][0] : xScale.invert(d3.event.x);
- const y = yScale.invert(d3.event.y);
- this.controlPoints[i] = [x, y];
+ const x = isFunction && (i === 0 || i === editor.controlPoints.length - 1) ? editor.controlPoints[i][0] : xScale.invert(event.x);
+ const y = yScale.invert(event.y);
+ editor.controlPoints[i] = [x, y];
draw();
- updateModel(this.controlPoints = this.controlPoints.slice());
+ updateModel(editor.controlPoints = editor.controlPoints.slice());
})
);
};
@@ -232,30 +234,33 @@ export class _CurveEditorView extends DOMWidgetView {
drag();
const click = () => {
+ const editor = this;
circles.on('.dblclick', null);
- circles.on('dblclick', (d, i) => {
- d3.event.stopPropagation();
- d3.event.preventDefault();
- if (isFunction && (i === 0 || i === this.controlPoints.length - 1)) {
+ circles.on('dblclick', function (event: any, d) {
+ // @ts-ignore
+ const i = circles.nodes().indexOf(this);
+ event.stopPropagation();
+ event.preventDefault();
+ if (isFunction && (i === 0 || i === editor.controlPoints.length - 1)) {
return;
}
- if (this.controlPoints.length > (this.curveType === CurveType.POLY_LINE ? 2 : 4)) {
- this.controlPoints.splice(i, 1);
- circles.data(this.controlPoints).exit().remove();
+ if (editor.controlPoints.length > (editor.curveType === CurveType.POLY_LINE ? 2 : 4)) {
+ editor.controlPoints.splice(i, 1);
+ circles.data(editor.controlPoints).exit().remove();
draw();
drag();
- this.model.unset('points');
- this.model.set('points', this.controlPoints = this.controlPoints.slice());
- this.touch();
+ editor.model.unset('points');
+ editor.model.set('points', editor.controlPoints = editor.controlPoints.slice());
+ editor.touch();
}
});
};
click();
- svg.on('dblclick', () => {
- d3.event.stopPropagation();
- d3.event.preventDefault();
+ svg.on('dblclick', (event: any) => {
+ event.stopPropagation();
+ event.preventDefault();
const add = (i, p) => {
this.controlPoints.splice(i, 0, p);
circles.remove();
@@ -274,8 +279,8 @@ export class _CurveEditorView extends DOMWidgetView {
this.model.set('points', this.controlPoints = this.controlPoints.slice());
this.touch();
};
- let x = xScale.invert(d3.event.offsetX - dx);
- const y = yScale.invert(d3.event.offsetY - dy);
+ let x = xScale.invert(event.offsetX - dx);
+ const y = yScale.invert(event.offsetY - dy);
let pi = 0;
for (let i = this.controlPoints.length - 1; i >= 0; i--) {
if (this.controlPoints[i][0] < x) {
diff --git a/src/widgets/widgets.ts b/src/widgets/widgets.ts
index ffd7061..ed65a74 100644
--- a/src/widgets/widgets.ts
+++ b/src/widgets/widgets.ts
@@ -196,7 +196,7 @@ export class PGLWidgetView extends DOMWidgetView {
if (!this.pglControlsState.autoRotate) {
window.cancelAnimationFrame(id)
}
- const [x, y, z] = this.camera.position.toArray();
+ // const [x, y, z] = this.camera.position.toArray();
this.orbitControl.update();
this.renderer.render(this.scene, this.camera);
};
diff --git a/tests/karma.conf.js b/tests/karma.conf.js
deleted file mode 100644
index 77f2055..0000000
--- a/tests/karma.conf.js
+++ /dev/null
@@ -1,41 +0,0 @@
-module.exports = function (config) {
- config.set({
- basePath: '..',
- frameworks: ['mocha', 'karma-typescript'],
- reporters: ['mocha', 'karma-typescript'],
- client: {
- mocha: {
- timeout : 10000, // 10 seconds - upped from 2 seconds
- retries: 3 // Allow for slow server on CI.
- }
- },
- files: [
- { pattern: "tests/src/**/*.ts" },
- { pattern: "src/**/*.ts" },
- ],
- exclude: [
- "src/extension.ts",
- ],
- preprocessors: {
- '**/*.ts': ['karma-typescript']
- },
- browserNoActivityTimeout: 31000, // 31 seconds - upped from 10 seconds
- port: 9876,
- colors: true,
- singleRun: true,
- logLevel: config.LOG_DEBUG,
-
-
- karmaTypescriptConfig: {
- tsconfig: 'tsconfig.json',
- reports: {
- "text-summary": "",
- "html": "coverage",
- "lcovonly": {
- "directory": "coverage",
- "filename": "coverage.lcov"
- }
- }
- }
- });
-};
diff --git a/tests/src/index.spec.ts b/tests/src/index.spec.ts
deleted file mode 100644
index 902330a..0000000
--- a/tests/src/index.spec.ts
+++ /dev/null
@@ -1,32 +0,0 @@
-// TODO: Fix tests - e.g. tsconfig rootdir problem
-
-import expect from 'expect.js';
-
-import {
- createTestModel
-} from './utils.spec';
-
-import {
- SceneWidgetModel, SceneWidgetView
-} from '../../src/'
-
-
-describe('SceneWidget', () => {
-
- describe('SceneWidgetModel', () => {
-
- it('should be createable', () => {
- let model = createTestModel(SceneWidgetModel);
- expect(model).to.be.an(SceneWidgetModel);
- });
-
- it('should be createable with a value', () => {
- let state = { plane: false }
- let model = createTestModel(SceneWidgetModel, state);
- expect(model).to.be.an(SceneWidgetModel);
- expect(model.get('plane')).to.be(false);
- });
-
- });
-
-});
diff --git a/tests/src/utils.spec.ts b/tests/src/utils.spec.ts
deleted file mode 100644
index 4361432..0000000
--- a/tests/src/utils.spec.ts
+++ /dev/null
@@ -1,110 +0,0 @@
-import * as widgets from '@jupyter-widgets/base';
-import * as services from '@jupyterlab/services';
-import * as Backbone from 'backbone';
-
-let numComms = 0;
-
-export
-class MockComm {
- target_name = 'dummy';
-
- constructor() {
- this.comm_id = `mock-comm-id-${numComms}`;
- numComms += 1;
- }
- on_close(fn: Function | null) {
- this._on_close = fn;
- }
- on_msg(fn: Function | null) {
- this._on_msg = fn;
- }
- _process_msg(msg: services.KernelMessage.ICommMsgMsg) {
- if (this._on_msg) {
- return this._on_msg(msg);
- } else {
- return Promise.resolve();
- }
- }
- close(): string {
- if (this._on_close) {
- this._on_close();
- }
- return 'dummy';
- }
- send(): string {
- return 'dummy';
- }
-
- open(): string {
- return 'dummy';
- }
- comm_id: string;
- _on_msg: Function | null = null;
- _on_close: Function | null = null;
-}
-
-export
-class DummyManager extends widgets.ManagerBase {
- constructor() {
- super();
- this.el = window.document.createElement('div');
- }
-
- display_view(msg: services.KernelMessage.IMessage, view: Backbone.View, options: any) {
- // TODO: make this a spy
- // TODO: return an html element
- return Promise.resolve(view).then(view => {
- this.el.appendChild(view.el);
- view.on('remove', () => console.log('view removed', view));
- return view.el;
- });
- }
-
- protected loadClass(className: string, moduleName: string, moduleVersion: string): Promise {
- if (moduleName === '@jupyter-widgets/base') {
- if ((widgets as any)[className]) {
- return Promise.resolve((widgets as any)[className]);
- } else {
- return Promise.reject(`Cannot find class ${className}`)
- }
- } else if (moduleName === 'jupyter-datawidgets') {
- if (this.testClasses[className]) {
- return Promise.resolve(this.testClasses[className]);
- } else {
- return Promise.reject(`Cannot find class ${className}`)
- }
- } else {
- return Promise.reject(`Cannot find module ${moduleName}`);
- }
- }
-
- _get_comm_info() {
- return Promise.resolve({});
- }
-
- _create_comm() {
- return Promise.resolve(new MockComm());
- }
-
- el: HTMLElement;
-
- testClasses: { [key: string]: any } = {};
-}
-
-
-export
-interface Constructor {
- new (attributes?: any, options?: any): T;
-}
-
-export
-function createTestModel(constructor: Constructor, attributes?: any): T {
- let id = widgets.uuid();
- let widget_manager = new DummyManager();
- let modelOptions = {
- widget_manager: widget_manager,
- model_id: id,
- }
-
- return new constructor(attributes, modelOptions);
-}
diff --git a/tests/tsconfig.json b/tests/tsconfig.json
deleted file mode 100644
index e85192d..0000000
--- a/tests/tsconfig.json
+++ /dev/null
@@ -1,12 +0,0 @@
-{
- "extends": "../tsconfig.json",
- "compilerOptions": {
- "outDir": "build",
- "skipLibCheck": true,
- "sourceMap": true,
- "rootDir": "src"
- },
- "include": [
- "tests/src/*.ts"
- ]
-}
diff --git a/tsconfig.json b/tsconfig.json
index f4e119e..be0a954 100644
--- a/tsconfig.json
+++ b/tsconfig.json
@@ -4,18 +4,19 @@
"noImplicitAny": false,
"declaration": true,
"esModuleInterop":true,
- "lib": ["dom"],
- "module": "ESNext",
+ "lib": ["es2017", "dom"],
+ "module": "esnext",
"moduleResolution": "node",
- "noEmitOnError": false,
- "noUnusedLocals": false,
+ "noEmitOnError": true,
+ "noUnusedLocals": true,
"outDir": "lib",
- "rootDir": "src",
"resolveJsonModule": true,
+ "rootDir": "src",
"skipLibCheck": true,
"sourceMap": true,
"strict": true,
- "target": "ES2017"
+ "strictPropertyInitialization": false,
+ "target": "es2017",
},
"include": [
"src/widgets/**/*.ts",
diff --git a/webpack.config.js b/webpack.config.js
index caabeef..b577cae 100644
--- a/webpack.config.js
+++ b/webpack.config.js
@@ -3,6 +3,16 @@ const version = require('./package.json').version;
// const BundleAnalyzerPlugin = require('webpack-bundle-analyzer').BundleAnalyzerPlugin;
const TerserPlugin = require('terser-webpack-plugin');
+const optimization = {
+ minimizer: [
+ new TerserPlugin({
+ parallel: true,
+ cache: true,
+ sourceMap: false
+ })
+ ]
+}
+
// Custom webpack rules
const rules = [
{ test: /\.ts$/, loader: 'ts-loader' },
@@ -53,8 +63,8 @@ module.exports = [
performance: {
hints: false
},
+ optimization: optimization,
plugins: [
- new TerserPlugin(),
// new BundleAnalyzerPlugin()
]
},
@@ -82,8 +92,8 @@ module.exports = [
module: {
rules: rules
},
+ optimization: optimization,
plugins: [
- new TerserPlugin(),
// new BundleAnalyzerPlugin()
],
externals: [
@@ -122,6 +132,7 @@ module.exports = [
// devtool: '',
externals,
resolve,
+ optimization: optimization,
performance: {
hints: false
}
From 904ab82b943ee6c78060768343bed3f84edc610d Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Thu, 26 May 2022 11:29:56 +0200
Subject: [PATCH 02/20] v2.0 (wip)
---
binder/Dockerfile | 11 -------
binder/environment.yml | 13 +++++++++
docker/README.md | 6 ----
docker/build.Dockerfile | 63 -----------------------------------------
docker/conda.Dockerfile | 21 --------------
docker/dev.Dockerfile | 10 -------
6 files changed, 13 insertions(+), 111 deletions(-)
delete mode 100644 binder/Dockerfile
create mode 100644 binder/environment.yml
delete mode 100644 docker/README.md
delete mode 100644 docker/build.Dockerfile
delete mode 100644 docker/conda.Dockerfile
delete mode 100644 docker/dev.Dockerfile
diff --git a/binder/Dockerfile b/binder/Dockerfile
deleted file mode 100644
index c293744..0000000
--- a/binder/Dockerfile
+++ /dev/null
@@ -1,11 +0,0 @@
-FROM jvail/plantgl-jupyter:2.0.0
-
-ARG NB_USER=jovyan
-ARG NB_UID=1000
-
-COPY . /home/${NB_USER}
-USER root
-RUN chown -R ${NB_UID} /home/${NB_USER}
-WORKDIR /home/${NB_USER}
-
-USER ${NB_USER}
diff --git a/binder/environment.yml b/binder/environment.yml
new file mode 100644
index 0000000..c76b871
--- /dev/null
+++ b/binder/environment.yml
@@ -0,0 +1,13 @@
+name: pgljupyter
+channels:
+ - fredboudon
+ - conda-forge
+dependencies:
+ - python=3.9
+ - jupyterlab=3.4
+ - ipywidgets=7.6
+ - openalea.lpy=3.9
+ - openalea.plantgl=3.14
+ - pip
+ - pip:
+ - pgljupyter
diff --git a/docker/README.md b/docker/README.md
deleted file mode 100644
index da6c38d..0000000
--- a/docker/README.md
+++ /dev/null
@@ -1,6 +0,0 @@
-just some snippets ..
-
-docker build --rm -f "docker/conda.Dockerfile" -t plantgl-jupyter:conda --network=host .
-docker run --rm -p 8888:8888 -v $PWD/examples:/home/jovyan/work plantgl-jupyter:conda jupyter lab
-
-docker run -it --rm -p 8080:8080 -v $PWD/examples:/examples plantgl-jupyter:build jupyter lab --port=8080 --allow-root --ip=0.0.0.0 --notebook-dir=/examples
diff --git a/docker/build.Dockerfile b/docker/build.Dockerfile
deleted file mode 100644
index cab5afd..0000000
--- a/docker/build.Dockerfile
+++ /dev/null
@@ -1,63 +0,0 @@
-FROM node:12-buster AS base
-
-WORKDIR /build
-
-RUN apt-get update && apt-get install -y git build-essential cmake \
- sudo r-base libboost-all-dev python3-dev libboost-python-dev python3-pip python3-pyqt5 pyqt5-dev-tools \
- zlib1g-dev libpng-dev libjpeg-dev libbz2-dev \
- libgl-dev libglu1-mesa libglu1-mesa-dev libgl1-mesa-dev libgl1-mesa-glx libgl1-mesa-dri freeglut3-dev \
- libqt5opengl5 qtbase5-dev libqt5x11extras5-dev libqhull-dev libcgal-dev libann-dev bison libeigen3-dev libfl-dev && \
- git clone https://github.com/google/draco.git && cd draco \
- git checkout tags/1.3.6 && \
- mkdir build && cd build && cmake -DBUILD_SHARED_LIBS=ON -DCMAKE_INSTALL_PREFIX=/opt ../ && make -j4 && make install && \
- git clone https://github.com/emscripten-core/emsdk.git && \
- cd emsdk && ./emsdk install latest && ./emsdk activate latest
-
-# FROM base AS r
-# RUN apt-get install -y r-base r-cran-vgam r-cran-multcomp r-cran-combinat && \
-# apt-get clean
-
-FROM base AS oa
-RUN git clone https://github.com/fredboudon/deploy.git && \
- git clone https://github.com/fredboudon/mtg.git
-
-FROM oa as plantgl
-ENV PREFIX /opt
-RUN git clone https://github.com/fredboudon/plantgl.git && cd plantgl && \
- sed -i '/set(Boost_NO_SYSTEM_PATHS ON)/c\set(Boost_NO_SYSTEM_PATHS OFF)' CMakeLists.txt && \
- mkdir build && cd build && cmake -DCMAKE_INSTALL_PREFIX=/opt -DCMAKE_BUILD_TYPE=Release ../ && \
- make -j4 && make install
-
-FROM plantgl as lpy
-ENV PREFIX /opt
-RUN git clone https://github.com/fredboudon/lpy.git && cd lpy && \
- sed -i '/set(Boost_NO_SYSTEM_PATHS ON)/c\set(Boost_NO_SYSTEM_PATHS OFF)' CMakeLists.txt && \
- mkdir build && cd build && cmake -DCMAKE_INSTALL_PREFIX=/opt -DCMAKE_BUILD_TYPE=Release -DPLANTGL_ROOT=/opt/plantgl ../ -DBOOST_INCLUDEDIR=/usr/include/boost && \
- make -j4 && make install
-
-FROM lpy as pgljupyter
-SHELL ["/bin/bash", "-c"]
-RUN git clone https://github.com/jvail/plantgl-jupyter.git && cd plantgl-jupyter && \
- git checkout bgeom-viewer && cd src/pgljs && npm install && cp -a /build/plantgl/* ./plantgl && cd ../.. && \
- source /build/emsdk/emsdk_env.sh && npm install && npm run build:pgljs && npm run build
-
-FROM python:3.7.8-slim-buster as py
-COPY --from=pgljupyter /build /build
-COPY --from=pgljupyter /opt /opt
-RUN apt-get update && apt-get install --no-install-recommends -y libboost-all-dev
-
-FROM py as deploy
-ENV PREFIX /opt
-RUN pip3 install --no-cache-dir toml matplotlib pandas future qtconsole numpy jupyter jupyterlab && \
- jupyter labextension install --no-build @jupyter-widgets/jupyterlab-manager && \
- cd /build/deploy && pip3 install . && \
- cd /build/mtg && pip3 install . && \
- cd /build/plantgl && pip3 install . && \
- cd /build/lpy && pip3 install . && \
- cd /build/plantgl-jupyter && pip3 install . && \
- jupyter nbextension install --overwrite --py pgljupyter && \
- jupyter nbextension enable --py pgljupyter && \
- jupyter labextension install --dev-build=False .
-
-WORKDIR /
-ENTRYPOINT []
diff --git a/docker/conda.Dockerfile b/docker/conda.Dockerfile
deleted file mode 100644
index 02ba3cd..0000000
--- a/docker/conda.Dockerfile
+++ /dev/null
@@ -1,21 +0,0 @@
-FROM jupyter/base-notebook:lab-3.0.16
-USER root
-SHELL ["/bin/bash", "-c"]
-RUN apt-get update && apt-get install --no-upgrade --no-install-recommends -y libgl1-mesa-dev && \
- apt-get clean && \
- apt-get autoremove -y && \
- rm -rf /var/lib/apt/lists/* && \
- conda install -y -c fredboudon -c conda-forge 'openalea.lpy>=3.6.0' 'ipywidgets>=7.5.0' 'ipython>=7.0.0' xarray-simlab pandas matplotlib rpy2 && \
- jupyter labextension install --no-build @jupyter-widgets/jupyterlab-manager && \
- pip3 install pgljupyter --no-cache && \
- jupyter lab build && \
- conda clean -y --all --force-pkgs-dirs && \
- jupyter lab clean && \
- jlpm cache clean && \
- npm cache clean --force && \
- rm -fr /tmp/*
-
-USER 1000
-WORKDIR $HOME
-# RUN rm -fr work
-ENTRYPOINT []
diff --git a/docker/dev.Dockerfile b/docker/dev.Dockerfile
deleted file mode 100644
index 6a0a7e0..0000000
--- a/docker/dev.Dockerfile
+++ /dev/null
@@ -1,10 +0,0 @@
-FROM plantgl-jupyter:build AS plantgl-jupyter-dev
-ARG USER_ID=1000
-RUN echo "root:root" | chpasswd && \
- groupadd -g ${USER_ID} user && \
- useradd --create-home --shell /bin/bash --uid ${USER_ID} --gid ${USER_ID} user && \
- echo "user:user" | chpasswd && \
- adduser user sudo && \
- chsh -s /bin/bash root
-USER ${USER_ID}
-WORKDIR /home/user
From 6efe5982b69841073923d3f9996f06da3523fd28 Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Thu, 26 May 2022 11:51:58 +0200
Subject: [PATCH 03/20] v2.0 (wip)
---
binder/apt.txt | 1 +
environment-dev.yml | 10 +++++-----
2 files changed, 6 insertions(+), 5 deletions(-)
create mode 100644 binder/apt.txt
diff --git a/binder/apt.txt b/binder/apt.txt
new file mode 100644
index 0000000..f359f07
--- /dev/null
+++ b/binder/apt.txt
@@ -0,0 +1 @@
+libgl1-mesa-glx
diff --git a/environment-dev.yml b/environment-dev.yml
index 6ebd5ad..c2db8c1 100644
--- a/environment-dev.yml
+++ b/environment-dev.yml
@@ -3,12 +3,12 @@ channels:
- fredboudon
- conda-forge
dependencies:
- - python=3.9.*
- - jupyterlab=3.4.*
+ - python=3.9
+ - jupyterlab=3.4
- jupyter-packaging
- - ipywidgets=7.6.*
- - openalea.lpy=3.9.*
- - openalea.plantgl=3.14.*
+ - ipywidgets=7.6
+ - openalea.lpy=3.9
+ - openalea.plantgl=3.14
- flake8
- pip
- pip:
From c2f01e8596e70d2c94b37676f9b9626e8dfaa10c Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Thu, 26 May 2022 12:10:47 +0200
Subject: [PATCH 04/20] v2.0 (wip)
---
README.md | 18 ++++--------------
1 file changed, 4 insertions(+), 14 deletions(-)
diff --git a/README.md b/README.md
index fd02691..7fab363 100644
--- a/README.md
+++ b/README.md
@@ -2,6 +2,8 @@
[PlantGL](https://github.com/fredboudon/plantgl) & [L-Py](https://github.com/fredboudon/lpy) jupyter widgets
+[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/fredboudon/plantgl-jupyter/HEAD?labpath=%2Fexamples%2Fbroccoli.ipynb)
+
![Leuvenberg](docs/lpy_leuwenberg.gif)
@@ -103,6 +105,7 @@ Arguments:
- `--unit`, `-u` enum: same as `unit`
- `--params`, `-p` LsystemParameters: name of LsystemParameters instance
- `--animate`, `-a` True: runs animation automatically
+- `--advanced-editor`, `-e` False: show/hide advanced parameter controls
Example:
@@ -157,6 +160,7 @@ Arguments:
- `arg0`, string: L-Py file
- `--size`, `-s` int,int: width and hight of the canvas
- `--cell`, `-c` float: size of cell for a single derivation step
+- `--derive`, `-d` int[,int[,int]]: start, stop, step derivation
Example:
@@ -185,7 +189,6 @@ conda create -y -n pgl -c fredboudon -c conda-forge \
```bash
conda activate pgl
-jupyter labextension install @jupyter-widgets/jupyterlab-manager
pip install pgljupyter
```
@@ -248,16 +251,3 @@ pip uninstall pgljupyter
In development mode, you will also need to remove the symlink created by `jupyter labextension develop`
command. To find its location, you can run `jupyter labextension list` to figure out where the `labextensions`
folder is located. Then you can remove the symlink named `pgljupyter` within that folder.
-
-## Docker
-
-Run jupyter as docker container locally. Replace `/examples` with the path to your notebooks.
-Tag `latest` might not always be up-to-date since docker is primarily used for binder
-
-```
-docker pull jvail/plantgl-jupyter:1.1.0
-docker run --rm \
- -p 8888:8888 \
- -v $PWD/examples:/home/jovyan/work jvail/plantgl-jupyter:1.1.0 \
- jupyter lab
-```
From 21fe85a7be6d047167e617ac21fd73ee8f39fb4f Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Thu, 26 May 2022 16:40:54 +0200
Subject: [PATCH 05/20] v2.0 (wip)
---
.../_static/embed-bundle.js.LICENSE.txt | 128 ++++++++++++++++++
1 file changed, 128 insertions(+)
create mode 100644 docs/source/_static/embed-bundle.js.LICENSE.txt
diff --git a/docs/source/_static/embed-bundle.js.LICENSE.txt b/docs/source/_static/embed-bundle.js.LICENSE.txt
new file mode 100644
index 0000000..743b1b3
--- /dev/null
+++ b/docs/source/_static/embed-bundle.js.LICENSE.txt
@@ -0,0 +1,128 @@
+/**
+ * @license
+ * Copyright 2010-2022 Three.js Authors
+ * SPDX-License-Identifier: MIT
+ */
+
+/**
+ * @license
+ * Copyright 2016 Google Inc.
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in
+ * all copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ * THE SOFTWARE.
+ */
+
+/**
+ * @license
+ * Copyright 2017 Google Inc.
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in
+ * all copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ * THE SOFTWARE.
+ */
+
+/**
+ * @license
+ * Copyright 2017 Google LLC
+ * SPDX-License-Identifier: BSD-3-Clause
+ */
+
+/**
+ * @license
+ * Copyright 2018 Google LLC
+ * SPDX-License-Identifier: Apache-2.0
+ */
+
+/**
+ * @license
+ * Copyright 2018 Google LLC
+ * SPDX-License-Identifier: BSD-3-Clause
+ */
+
+/**
+ * @license
+ * Copyright 2019 Google LLC
+ * SPDX-License-Identifier: Apache-2.0
+ */
+
+/**
+ * @license
+ * Copyright 2019 Google LLC
+ * SPDX-License-Identifier: BSD-3-Clause
+ */
+
+/**
+ * @license
+ * Copyright 2020 Google LLC
+ * SPDX-License-Identifier: Apache-2.0
+ */
+
+/**
+ * @license
+ * Copyright 2021 Google Inc.
+ *
+ * Permission is hereby granted, free of charge, to any person obtaining a copy
+ * of this software and associated documentation files (the "Software"), to deal
+ * in the Software without restriction, including without limitation the rights
+ * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ * copies of the Software, and to permit persons to whom the Software is
+ * furnished to do so, subject to the following conditions:
+ *
+ * The above copyright notice and this permission notice shall be included in
+ * all copies or substantial portions of the Software.
+ *
+ * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ * THE SOFTWARE.
+ */
+
+/**
+ * @license
+ * Copyright 2021 Google LLC
+ * SPDX-LIcense-Identifier: Apache-2.0
+ */
+
+/**
+ * @license
+ * Copyright 2021 Google LLC
+ * SPDX-License-Identifier: Apache-2.0
+ */
+
+/**
+ * @license
+ * Copyright 2021 Google LLC
+ * SPDX-License-Identifier: BSD-3-Clause
+ */
From 378f5796d23dcb67036b1f87c0d9dbcba453b2fd Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Fri, 27 May 2022 15:03:46 +0200
Subject: [PATCH 06/20] Bump version & update RELEASE
---
RELEASE.md | 84 ++++++++++++++++++++++++++---------------
package-lock.json | 2 +-
package.json | 6 +--
pgljupyter/_frontend.py | 2 +-
pgljupyter/_version.py | 2 +-
5 files changed, 60 insertions(+), 36 deletions(-)
diff --git a/RELEASE.md b/RELEASE.md
index 671ad5b..8e8b1b8 100644
--- a/RELEASE.md
+++ b/RELEASE.md
@@ -1,44 +1,68 @@
-# Releasing
+## Manual release
-## bump version in **all** relevant files:
+This extension can be distributed as Python packages. All of the Python packaging instructions in the `pyproject.toml` file to wrap your extension in a Python package. Before generating a package, we first need to install `build`.
- - package.json
- - package-lock.json
- - binder/Dockerfile
- - pgljupyter/_frontend.py
- - pgljupyter/_version.py
+```bash
+pip install build twine
+```
- And update README
+## Bump version in **all** relevant files
-## commit all changes
+- package.json
+- package-lock.json
+- pgljupyter/_frontend.py
+- pgljupyter/_version.py
-## test if npm builds and publish npm pkg
- npm run clean
- npm run build:all
- npm publish
+## Update README
-## build python pkgs and publish them
+- version
+- API spec
+- descriptions
- Check that there are not multiple versions in dist/ that will be published, packed together
+## Commit all changes in branch develop
- npm run clean
- python3 setup.py sdist bdist_wheel
- twine upload dist/*{0.x.xx}*
+## Clean-up everything
-## merge changes into master and push
+```bash
+npm run clean:all
+```
-## tag and check if docker build was successful
+## Build python pkgs and publish them
- git tag -a v0.x.xx -m "v0.x.xx"
- git push --tags
+Activate conda dev env and emsdk e.g.
-## if docker build failed
+```bash
+conda activate pgljupyter-dev
+source ~/emsdk/emsdk_env.sh
+```
- - fix docker build
- - delete tag in local and remote:
- git push --delete origin v0.x.xx
- git tag -d v0.x.xx
- - re-tag with the **same** tag you just removed to trigger a new docker build:
- git tag -a v0.x.xx -m "v0.x.xx"
- git push --tags
+To create a Python source package (`.tar.gz`) and the binary package (`.whl`) in the `dist/` directory, do:
+
+```bash
+python -m build
+```
+
+Make sure there are no old/oudated files in dist/
+Then to upload the package to PyPI, do:
+
+```bash
+twine upload dist/*
+```
+
+## Test if npm builds and publish npm pkg
+
+```bash
+npm run clean:all
+npm run build:all
+npm login
+npm publish
+```
+
+## Merge changes into master, tag and push
+
+```bash
+git push
+git tag -a v{version} -m "v{version}"
+git push --tags
+```
diff --git a/package-lock.json b/package-lock.json
index d533d2d..f194cfd 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -1,6 +1,6 @@
{
"name": "pgljupyter",
- "version": "2.0.0",
+ "version": "2.0.0-beta.0",
"lockfileVersion": 1,
"requires": true,
"dependencies": {
diff --git a/package.json b/package.json
index 900b01e..3571399 100644
--- a/package.json
+++ b/package.json
@@ -1,6 +1,6 @@
{
"name": "pgljupyter",
- "version": "2.0.0-beta",
+ "version": "2.0.0-beta.0",
"description": "PlantGL and L-Py Jupyter widgets",
"keywords": [
"jupyter",
@@ -40,8 +40,8 @@
"clean:lib": "rimraf lib tsconfig.tsbuildinfo",
"clean:lintcache": "rimraf .eslintcache .stylelintcache",
"clean:labextension": "rimraf pgljupyter/labextension",
- "clean:nbextension": "rimraf ts-widget-extension/nbextension/static/index.js",
- "clean:all": "jlpm clean:lib && jlpm clean:labextension && jlpm clean:nbextension && jlpm clean:lintcache",
+ "clean:nbextension": "rimraf ts-widget-extension/nbextension/static/index.js",
+ "clean:all": "rimraf dist && jlpm clean:lib && jlpm clean:labextension && jlpm clean:nbextension && jlpm clean:lintcache",
"install:extension": "jlpm build"
},
"dependencies": {
diff --git a/pgljupyter/_frontend.py b/pgljupyter/_frontend.py
index ccf09b6..fd5ed4d 100644
--- a/pgljupyter/_frontend.py
+++ b/pgljupyter/_frontend.py
@@ -3,4 +3,4 @@
"""
module_name = "pgljupyter"
-module_version = "^2.0.0-beta"
+module_version = "^2.0.0-beta.0"
diff --git a/pgljupyter/_version.py b/pgljupyter/_version.py
index c748977..9c61fa6 100644
--- a/pgljupyter/_version.py
+++ b/pgljupyter/_version.py
@@ -1,2 +1,2 @@
-version_info = (2, 0, 0, '-beta')
+version_info = (2, 0, 0, '-beta.0')
__version__ = ".".join(map(str, version_info))
From 272c7625b59b247cfa09508ac5f5fcd8c0af0d29 Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Fri, 27 May 2022 15:55:31 +0200
Subject: [PATCH 07/20] Update deps & Release & Readme
---
README.md | 7 ++-
RELEASE.md | 5 +-
environment-dev.yml | 3 +-
package-lock.json | 134 +++++++++++++++++++++++++++++++++-----------
package.json | 2 +-
5 files changed, 110 insertions(+), 41 deletions(-)
diff --git a/README.md b/README.md
index 7fab363..7cb0da1 100644
--- a/README.md
+++ b/README.md
@@ -2,6 +2,8 @@
[PlantGL](https://github.com/fredboudon/plantgl) & [L-Py](https://github.com/fredboudon/lpy) jupyter widgets
+Currently supports openalea.lpy>=3.9.0 and openalea.plantgl>=3.14.0 from conda channel ['fredboudon'](https://anaconda.org/fredboudon/openalea.lpy).
+
[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/fredboudon/plantgl-jupyter/HEAD?labpath=%2Fexamples%2Fbroccoli.ipynb)
@@ -179,12 +181,11 @@ Tutorial:
### Install with pip - inside conda env
-Building JupyterLab extensions requires nodejs. In case it is not available on your system add `nodejs` to the
-`conda create` command. Some examples also require `matplotlib`, `xarray-simlab` and `rpy2`.
+Some examples also require `matplotlib`, `xarray-simlab` and `rpy2`.
```bash
conda create -y -n pgl -c fredboudon -c conda-forge \
- openalea.lpy jupyterlab ipywidgets ipython=7 pip
+ openalea.lpy jupyterlab ipywidgets pip
```
```bash
diff --git a/RELEASE.md b/RELEASE.md
index 8e8b1b8..087ae72 100644
--- a/RELEASE.md
+++ b/RELEASE.md
@@ -36,8 +36,7 @@ Activate conda dev env and emsdk e.g.
conda activate pgljupyter-dev
source ~/emsdk/emsdk_env.sh
```
-
-To create a Python source package (`.tar.gz`) and the binary package (`.whl`) in the `dist/` directory, do:
+You need build and twine installed. To create a Python source package (`.tar.gz`) and the binary package (`.whl`) in the `dist/` directory, do:
```bash
python -m build
@@ -47,7 +46,7 @@ Make sure there are no old/oudated files in dist/
Then to upload the package to PyPI, do:
```bash
-twine upload dist/*
+twine upload dist/pgljupyter-*
```
## Test if npm builds and publish npm pkg
diff --git a/environment-dev.yml b/environment-dev.yml
index c2db8c1..5827386 100644
--- a/environment-dev.yml
+++ b/environment-dev.yml
@@ -12,6 +12,5 @@ dependencies:
- flake8
- pip
- pip:
- # build & release: see https://github.com/jupyterlab/extension-cookiecutter-ts
+ # for build & release: see https://github.com/jupyterlab/extension-cookiecutter-ts
- build
- - twine
diff --git a/package-lock.json b/package-lock.json
index f194cfd..8192a0f 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -7902,14 +7902,13 @@
}
},
"enhanced-resolve": {
- "version": "4.5.0",
- "resolved": "https://registry.npmjs.org/enhanced-resolve/-/enhanced-resolve-4.5.0.tgz",
- "integrity": "sha512-Nv9m36S/vxpsI+Hc4/ZGRs0n9mXqSWGGq49zxb/cJfPAQMbUtttJAlNPS4AQzaBdw/pKskw5bMbekT/Y7W/Wlg==",
+ "version": "5.9.3",
+ "resolved": "https://registry.npmjs.org/enhanced-resolve/-/enhanced-resolve-5.9.3.tgz",
+ "integrity": "sha512-Bq9VSor+kjvW3f9/MiiR4eE3XYgOl7/rS8lnSxbRbF3kS0B2r+Y9w5krBWxZgDxASVZbdYrn5wT4j/Wb0J9qow==",
"dev": true,
"requires": {
- "graceful-fs": "^4.1.2",
- "memory-fs": "^0.5.0",
- "tapable": "^1.0.0"
+ "graceful-fs": "^4.2.4",
+ "tapable": "^2.2.0"
}
},
"enquirer": {
@@ -7942,6 +7941,7 @@
"version": "0.1.8",
"resolved": "https://registry.npmjs.org/errno/-/errno-0.1.8.tgz",
"integrity": "sha512-dJ6oBr5SQ1VSd9qkk7ByRgb/1SH4JZjCHSW/mr63/QcXO9zLVxvJ6Oy13nio03rxpSnVDDjFor75SjVeZWPW/A==",
+ "optional": true,
"requires": {
"prr": "~1.0.1"
}
@@ -10846,16 +10846,6 @@
"timers-ext": "^0.1.7"
}
},
- "memory-fs": {
- "version": "0.5.0",
- "resolved": "https://registry.npmjs.org/memory-fs/-/memory-fs-0.5.0.tgz",
- "integrity": "sha512-jA0rdU5KoQMC0e6ppoNRtpp6vjFq6+NY7r8hywnC7V+1Xj/MtHwGIbB1QaK/dunyjWteJzmkpd7ooeWg10T7GA==",
- "dev": true,
- "requires": {
- "errno": "^0.1.3",
- "readable-stream": "^2.0.1"
- }
- },
"memorystream": {
"version": "0.3.1",
"resolved": "https://registry.npmjs.org/memorystream/-/memorystream-0.3.1.tgz",
@@ -11893,7 +11883,8 @@
"prr": {
"version": "1.0.1",
"resolved": "https://registry.npmjs.org/prr/-/prr-1.0.1.tgz",
- "integrity": "sha1-0/wRS6BplaRexok/SEzrHXj19HY="
+ "integrity": "sha1-0/wRS6BplaRexok/SEzrHXj19HY=",
+ "optional": true
},
"psl": {
"version": "1.8.0",
@@ -13336,9 +13327,9 @@
}
},
"tapable": {
- "version": "1.1.3",
- "resolved": "https://registry.npmjs.org/tapable/-/tapable-1.1.3.tgz",
- "integrity": "sha512-4WK/bYZmj8xLr+HUCODHGF1ZFzsYffasLUgEiMBY4fgtltdO6B4WJtlSbPaDTLpYTcGVwM2qLnFTICEcNxs3kA==",
+ "version": "2.2.1",
+ "resolved": "https://registry.npmjs.org/tapable/-/tapable-2.2.1.tgz",
+ "integrity": "sha512-GNzQvQTOIP6RyTfE2Qxb8ZVlNmw0n88vp1szwWRimP02mnTsx3Wtn5qRdqY9w2XduFNUgvOwhNnQsjwCp+kqaQ==",
"dev": true
},
"tar": {
@@ -13565,23 +13556,102 @@
"dev": true
},
"ts-loader": {
- "version": "5.4.5",
- "resolved": "https://registry.npmjs.org/ts-loader/-/ts-loader-5.4.5.tgz",
- "integrity": "sha512-XYsjfnRQCBum9AMRZpk2rTYSVpdZBpZK+kDh0TeT3kxmQNBDVIeUjdPjY5RZry4eIAb8XHc4gYSUiUWPYvzSRw==",
+ "version": "9.3.0",
+ "resolved": "https://registry.npmjs.org/ts-loader/-/ts-loader-9.3.0.tgz",
+ "integrity": "sha512-2kLLAdAD+FCKijvGKi9sS0OzoqxLCF3CxHpok7rVgCZ5UldRzH0TkbwG9XECKjBzHsAewntC5oDaI/FwKzEUog==",
"dev": true,
"requires": {
- "chalk": "^2.3.0",
- "enhanced-resolve": "^4.0.0",
- "loader-utils": "^1.0.2",
- "micromatch": "^3.1.4",
- "semver": "^5.0.1"
+ "chalk": "^4.1.0",
+ "enhanced-resolve": "^5.0.0",
+ "micromatch": "^4.0.0",
+ "semver": "^7.3.4"
},
"dependencies": {
- "semver": {
- "version": "5.7.1",
- "resolved": "https://registry.npmjs.org/semver/-/semver-5.7.1.tgz",
- "integrity": "sha512-sauaDf/PZdVgrLTNYHRtpXa1iRiKcaebiKQ1BJdpQlWH2lCvexQdX55snPFyK7QzpudqbCI0qXFfOasHdyNDGQ==",
+ "ansi-styles": {
+ "version": "4.3.0",
+ "resolved": "https://registry.npmjs.org/ansi-styles/-/ansi-styles-4.3.0.tgz",
+ "integrity": "sha512-zbB9rCJAT1rbjiVDb2hqKFHNYLxgtk8NURxZ3IZwD3F6NtxbXZQCnnSi1Lkx+IDohdPlFp222wVALIheZJQSEg==",
+ "dev": true,
+ "requires": {
+ "color-convert": "^2.0.1"
+ }
+ },
+ "braces": {
+ "version": "3.0.2",
+ "resolved": "https://registry.npmjs.org/braces/-/braces-3.0.2.tgz",
+ "integrity": "sha512-b8um+L1RzM3WDSzvhm6gIz1yfTbBt6YTlcEKAvsmqCZZFw46z626lVj9j1yEPW33H5H+lBQpZMP1k8l+78Ha0A==",
+ "dev": true,
+ "requires": {
+ "fill-range": "^7.0.1"
+ }
+ },
+ "chalk": {
+ "version": "4.1.2",
+ "resolved": "https://registry.npmjs.org/chalk/-/chalk-4.1.2.tgz",
+ "integrity": "sha512-oKnbhFyRIXpUuez8iBMmyEa4nbj4IOQyuhc/wy9kY7/WVPcwIO9VA668Pu8RkO7+0G76SLROeyw9CpQ061i4mA==",
+ "dev": true,
+ "requires": {
+ "ansi-styles": "^4.1.0",
+ "supports-color": "^7.1.0"
+ }
+ },
+ "color-convert": {
+ "version": "2.0.1",
+ "resolved": "https://registry.npmjs.org/color-convert/-/color-convert-2.0.1.tgz",
+ "integrity": "sha512-RRECPsj7iu/xb5oKYcsFHSppFNnsj/52OVTRKb4zP5onXwVF3zVmmToNcOfGC+CRDpfK/U584fMg38ZHCaElKQ==",
+ "dev": true,
+ "requires": {
+ "color-name": "~1.1.4"
+ }
+ },
+ "color-name": {
+ "version": "1.1.4",
+ "resolved": "https://registry.npmjs.org/color-name/-/color-name-1.1.4.tgz",
+ "integrity": "sha512-dOy+3AuW3a2wNbZHIuMZpTcgjGuLU/uBL/ubcZF9OXbDo8ff4O8yVp5Bf0efS8uEoYo5q4Fx7dY9OgQGXgAsQA==",
"dev": true
+ },
+ "fill-range": {
+ "version": "7.0.1",
+ "resolved": "https://registry.npmjs.org/fill-range/-/fill-range-7.0.1.tgz",
+ "integrity": "sha512-qOo9F+dMUmC2Lcb4BbVvnKJxTPjCm+RRpe4gDuGrzkL7mEVl/djYSu2OdQ2Pa302N4oqkSg9ir6jaLWJ2USVpQ==",
+ "dev": true,
+ "requires": {
+ "to-regex-range": "^5.0.1"
+ }
+ },
+ "is-number": {
+ "version": "7.0.0",
+ "resolved": "https://registry.npmjs.org/is-number/-/is-number-7.0.0.tgz",
+ "integrity": "sha512-41Cifkg6e8TylSpdtTpeLVMqvSBEVzTttHvERD741+pnZ8ANv0004MRL43QKPDlK9cGvNp6NZWZUBlbGXYxxng==",
+ "dev": true
+ },
+ "micromatch": {
+ "version": "4.0.5",
+ "resolved": "https://registry.npmjs.org/micromatch/-/micromatch-4.0.5.tgz",
+ "integrity": "sha512-DMy+ERcEW2q8Z2Po+WNXuw3c5YaUSFjAO5GsJqfEl7UjvtIuFKO6ZrKvcItdy98dwFI2N1tg3zNIdKaQT+aNdA==",
+ "dev": true,
+ "requires": {
+ "braces": "^3.0.2",
+ "picomatch": "^2.3.1"
+ }
+ },
+ "semver": {
+ "version": "7.3.7",
+ "resolved": "https://registry.npmjs.org/semver/-/semver-7.3.7.tgz",
+ "integrity": "sha512-QlYTucUYOews+WeEujDoEGziz4K6c47V/Bd+LjSSYcA94p+DmINdf7ncaUinThfvZyu13lN9OY1XDxt8C0Tw0g==",
+ "dev": true,
+ "requires": {
+ "lru-cache": "^6.0.0"
+ }
+ },
+ "to-regex-range": {
+ "version": "5.0.1",
+ "resolved": "https://registry.npmjs.org/to-regex-range/-/to-regex-range-5.0.1.tgz",
+ "integrity": "sha512-65P7iz6X5yEr1cwcgvQxbbIw7Uk3gOy5dIdtZ4rDveLqhrdJP+Li/Hx6tyK0NEb+2GCyneCMJiGqrADCSNk8sQ==",
+ "dev": true,
+ "requires": {
+ "is-number": "^7.0.0"
+ }
}
}
},
diff --git a/package.json b/package.json
index 3571399..1e0dd9c 100644
--- a/package.json
+++ b/package.json
@@ -81,7 +81,7 @@
"style-loader": "^1.3.0",
"svg-inline-loader": "^0.8.2",
"terser-webpack-plugin": "^3.1.0",
- "ts-loader": "^5.2.1",
+ "ts-loader": "^9.3.0",
"typescript": "^4.6.4",
"webpack": "^5.72.1",
"webpack-bundle-analyzer": "^3.9.0",
From 607960bb731204ae5db113052904041ff60aecdc Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Fri, 27 May 2022 18:55:55 +0200
Subject: [PATCH 08/20] Fix derivation step (fredboudon#56)
---
pgljupyter/widgets.py | 7 +++++--
1 file changed, 5 insertions(+), 2 deletions(-)
diff --git a/pgljupyter/widgets.py b/pgljupyter/widgets.py
index 09bbc8c..8a2c4ff 100644
--- a/pgljupyter/widgets.py
+++ b/pgljupyter/widgets.py
@@ -290,7 +290,7 @@ def set_parameters(self, parameters):
self.__codes[0],
lp.generate_py_code()
]), self.__extra_context)
- self.derivationLength = self.__lsystem.derivationLength + 1
+ self.derivationLength = self.__lsystem.derivationLength
self.__trees = []
self.__trees.append(self.__lsystem.axiom)
self.__derivationStep = self.__derivationStep if self.__derivationStep < self.derivationLength else self.derivationLength - 1
@@ -313,11 +313,13 @@ def __initialize_lsystem(self):
self.__lp.generate_py_code()
]), self.__extra_context)
self.__derivationStep = 0
+ # the axiom is treated as derivationStep 0 therefor we need one step more
self.derivationLength = self.__lsystem.derivationLength + 1
self.__trees = [self.__lsystem.axiom]
def __on_custom_msg(self, widget, content, buffers):
if 'derive' in content:
+ print(content)
step = content['derive']
if step < self.derivationLength:
if step < len(self.__trees):
@@ -357,6 +359,7 @@ def __derive(self, step):
self.__set_scene(step)
break
else:
- self.__trees.append(self.__lsystem.derive(self.__trees[-1], len(self.__trees), 1))
+ # do derive len(self.__trees) - 1 because we are one step ahead since the axiom is step 0
+ self.__trees.append(self.__lsystem.derive(self.__trees[-1], len(self.__trees) - 1, 1))
else:
raise ValueError(f'derivation step {step} out of Lsystem bounds')
From ed43db70ecd54dcd252666d9955c1d331e336a80 Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Sat, 28 May 2022 08:18:51 +0200
Subject: [PATCH 09/20] Reload file on rewind (fredboudon#60)
---
pgljupyter/widgets.py | 25 ++++++++++++++-----------
1 file changed, 14 insertions(+), 11 deletions(-)
diff --git a/pgljupyter/widgets.py b/pgljupyter/widgets.py
index 8a2c4ff..345611f 100644
--- a/pgljupyter/widgets.py
+++ b/pgljupyter/widgets.py
@@ -213,16 +213,7 @@ def __init__(self, filename=None, code=None, unit=Unit.none, animate=False, dump
self.__lsystem = lpy.Lsystem()
self.__extra_context = context
self.__lp = lp
- code_ = ''
- if self.__filename and Path(self.__filename).is_file():
- with io.open(self.__filename, 'r') as file:
- code_ = file.read()
- else:
- self.is_magic = True
- code_ = code
-
- self.__codes = code_.split(lpy.LpyParsing.InitialisationBeginTag)
- self.__codes.insert(1, f'\n{lpy.LpyParsing.InitialisationBeginTag}\n')
+ self.__read_code(code)
self.unit = unit
self.animate = animate
@@ -245,6 +236,17 @@ def editor(self):
else:
return None
+ def __read_code(self, code=None):
+ if self.__filename and Path(self.__filename).is_file():
+ with io.open(self.__filename, 'r') as file:
+ code = file.read()
+ else:
+ self.is_magic = True
+ code = code or ''
+
+ self.__codes = code.split(lpy.LpyParsing.InitialisationBeginTag)
+ self.__codes.insert(1, f'\n{lpy.LpyParsing.InitialisationBeginTag}\n')
+
def __initialize_parameters(self):
self.__lp = LsystemParameters()
if not self.is_magic:
@@ -319,7 +321,7 @@ def __initialize_lsystem(self):
def __on_custom_msg(self, widget, content, buffers):
if 'derive' in content:
- print(content)
+ # print(content)
step = content['derive']
if step < self.derivationLength:
if step < len(self.__trees):
@@ -330,6 +332,7 @@ def __on_custom_msg(self, widget, content, buffers):
self.__rewind()
def __rewind(self):
+ self.__read_code()
self.__initialize_lsystem()
self.__set_scene(0)
From ce20688ed40863109ac91887bde3e7efafe1c507 Mon Sep 17 00:00:00 2001
From: jvail <6503378+jvail@users.noreply.github.com>
Date: Sat, 28 May 2022 08:19:13 +0200
Subject: [PATCH 10/20] Update gif
---
docs/lpy_leuwenberg.gif | Bin 2000440 -> 3720732 bytes
1 file changed, 0 insertions(+), 0 deletions(-)
diff --git a/docs/lpy_leuwenberg.gif b/docs/lpy_leuwenberg.gif
index 3d29c7b290e31fc23e95458b9596b76f826b0ccf..0a0f503538dddd29327888970b8e59620ef34515 100644
GIT binary patch
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