diff --git a/code/validation/check_truth.txt b/code/validation/check_truth.txt index a94be96ec..18a665ca0 100644 --- a/code/validation/check_truth.txt +++ b/code/validation/check_truth.txt @@ -11576,3 +11576,30 @@ Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub- - The following locations are missing: ['Netherlands']. +Latest check of truth data: 2024-06-10 + +WARNING +Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Deaths.csv' at 2024-06-01: + +- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Cyprus', 'Czechia', 'Denmark', 'Greece', 'Hungary', 'Iceland', 'Ireland', 'Italy', 'Latvia', 'Luxembourg', 'Malta', 'Netherlands', 'Norway', 'Poland', 'Slovakia', 'Slovenia', 'Sweden']. + +WARNING +Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Cases.csv' at 2024-06-01: + +- The following locations are missing: ['Croatia', 'Cyprus', 'Denmark', 'Italy', 'Latvia']. + +WARNING +Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Deaths.csv' at 2024-06-01: + +- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Cyprus', 'Denmark', 'Hungary', 'Iceland', 'Italy', 'Latvia', 'Luxembourg', 'Netherlands', 'Norway']. + +WARNING +Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Cases.csv' at 2024-06-01: + +- The following locations are missing: ['Belgium', 'Croatia', 'Cyprus', 'Denmark', 'Italy', 'Latvia', 'Netherlands', 'Norway', 'Slovakia']. + +WARNING +Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/OWID/truth_OWID-Incident Hospitalizations.csv' at 2024-06-08: + +- The following locations are missing: ['Netherlands']. + diff --git a/data-truth/README.md b/data-truth/README.md index 4f11de941..c76e81ba3 100644 --- a/data-truth/README.md +++ b/data-truth/README.md @@ -74,14 +74,14 @@ indicating data expecting to be substanially revised. Poland, Portugal, Romania, Slovakia, Slovenia, Sweden - Deaths: Bulgaria, Croatia, Cyprus, Czechia, Denmark, Estonia, Greece, - Hungary, Ireland, Italy, Latvia, Liechtenstein, Lithuania, Malta, - Poland, Portugal, Romania, Slovakia, Slovenia, Sweden + Ireland, Italy, Latvia, Liechtenstein, Lithuania, Malta, Poland, + Portugal, Romania, Slovakia, Slovenia, Sweden -- **Data warning!** Recent missing data for cases in: Croatia, Denmark, - Estonia, Italy, and Latvia +- **Data warning!** Recent missing data for cases in: Croatia, Cyprus, + Denmark, Italy, and Latvia -- **Data warning!** Recent missing data for deaths in: Croatia, Denmark, - Estonia, Hungary, Italy, and Latvia +- **Data warning!** Recent missing data for deaths in: Croatia, Cyprus, + Denmark, Italy, and Latvia We further evaluate forecasts of cases and deaths against data provided [ECDC](https://www.ecdc.europa.eu/), which we recommend using as the @@ -139,6 +139,8 @@ indicating data expecting to be substanially revised. ## `geom_line()`: Each group consists of only one observation. ## ℹ Do you need to adjust the group aesthetic? + ## `geom_line()`: Each group consists of only one observation. + ## ℹ Do you need to adjust the group aesthetic? ![Plot of cases](plots/Cases.svg) ![Plot of deaths](plots/Deaths.svg) diff --git a/data-truth/plots/Cases.svg b/data-truth/plots/Cases.svg index ebf5e02a9..dbff5e91a 100644 --- a/data-truth/plots/Cases.svg +++ b/data-truth/plots/Cases.svg @@ -21,1320 +21,1341 @@ - 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- - - - + + + + + - - - - - - + + + + + + @@ -180,22 +180,22 @@ - - - - - + + + + + - - - - - - - + + + + + + + @@ -251,23 +251,23 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -282,23 +282,23 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -313,23 +313,23 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -343,24 +343,24 @@ - - - - - + + + + + - - - - - - - - + + + + + + + + @@ -374,22 +374,22 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -472,21 +472,21 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -500,21 +500,21 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -598,21 +598,21 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -635,21 +635,21 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -663,21 +663,21 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -690,21 +690,21 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -719,23 +719,23 @@ - - - - - + + + + + - - - - - - + + + + + + @@ -1043,42 +1043,42 @@ Czechia -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 Apr Jul Oct Apr Jul Oct -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 Apr 2023 Jul 2023 Oct 2023 @@ -1089,39 +1089,39 @@ Oct 2023 Jan 2024 Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 Apr Jul Oct -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 Apr 2023 Jul 2023 Oct 2023 Jan 2024 Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 Apr 2023 Jul 2023 Oct 2023 @@ -1130,22 +1130,22 @@ Apr Jul Oct -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 Apr Jul Oct Apr Jul Oct -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 Apr 2023 Jul 2023 Oct 2023 @@ -1156,11 +1156,11 @@ Oct 2023 Jan 2024 Apr 2024 -Apr 2023 -Jul 2023 -Oct 2023 -Jan 2024 -Apr 2024 +Apr 2023 +Jul 2023 +Oct 2023 +Jan 2024 +Apr 2024 0 20 40 @@ -1270,6 +1270,6 @@ Deaths Commit date -2024-06-05 +2024-06-10 diff --git a/data-truth/plots/revisions-Hospitalizations.svg b/data-truth/plots/revisions-Hospitalizations.svg index c92325205..ab03b2caa 100644 --- a/data-truth/plots/revisions-Hospitalizations.svg +++ b/data-truth/plots/revisions-Hospitalizations.svg @@ -114,7 +114,7 @@ - + @@ -191,15 +191,15 @@ -2024-03-31 -2024-04-07 -2024-04-14 -2024-04-21 -2024-04-28 -2024-05-05 -2024-05-12 -2024-05-19 -2024-05-26 -2024-06-09 +2024-04-01 +2024-04-08 +2024-04-15 +2024-04-22 +2024-04-29 +2024-05-06 +2024-05-13 +2024-05-20 +2024-05-27 +2024-06-10