Merge latest developments from GEOMAR into release #1138

seb-wahl · 2024-02-19T10:25:19Z

Hi
this will merge mostly FOCIOIFS related developments.
Still contains the bug described by @joakimkjellsson in #1137

…urations

… to runscript

…nto geomar_dev

…terns of NaN during the first time step

… the v1.0.5 Levitus initial data

Feature/add eorca025 standalone

…have been made updated nemo4 example standalone runscripts.

uncomment compiler_mpi in blogin.yaml again

…ate nest1 as true or false

changed for nemo from shlat 2 -> 0 nn_closea 1 -> 0 fixed bgc passive tracer definitions changed the coupling definitions -> oasis version 5.0, xios2.5 r1910 new compiler settings for intel2023_impi2021 (glogin specific with intel_oneapi, maybe this has to be done cleaner?) increased debug level some changes to the runscript yaml

…nto geomar_dev

…ng' into geomar_dev merge Tronje's MOPS developments into geomar_dev

Joakims developments, remove a few hardcoded paths

…grid

…ase_geomar_dev

…2014 with FOCI-MOPS and added bugfixes to the config files.

…nto geomar_dev

Bugfix bracket not closed

…he update.

…om perl installation

seb-wahl and others added 30 commits December 6, 2022 13:12

fix previously introduced bug: use correct archfile with AGRIF config…

e7eb2ed

…urations

added AGRIF configuration without AOW tracer

7b7bb1c

added missint nemo-ORCA05_LIM2_FOCI_AGRIF+echam-6.3.05p2-foci folder

878539a

fix leap year settings

e7a9645

started adding things for Tco399-ORCA12. Also add ln_single_prec_send…

d50db54

… to runscript

Merge branch 'geomar_dev' of https://github.com/esm-tools/esm_tools i…

8cb5960

…nto geomar_dev

oifs annual means was not working. Seems ok now.

241de9e

bugfixes in monitoring for nemo

95793a2

added runscript for spinup-1950 for foci-openifs

28433db

fix small conflict

c2cf835

Merge branch 'geomar_dev' of https://github.com/esm-tools/esm_tools i…

883271a

…nto geomar_dev

added mocsigma and 26.5N AMOC MAX

38b331e

clean up focioifs and fix runoff for AGRIF

4303393

FOCI-OpenIFS-VIKING10 works on glogin with proper runoff remapping

9cdf132

add settings for ORION10X

a39d2d0

added a few foci runscript examples

aa6f8e3

Merge branch 'release' into geomar_dev

daf3af1

added correct nest_refinement for WG10v4

622c93e

first draft of eORCA025.z75.SI3, still crashes with diamond shape pat…

d84a490

…terns of NaN during the first time step

fixed two bugs in nemo postprocessing (date math)

29d55b3

added nemo4.2 configuration that ran 3 years using JRA-55 forcing and…

dcc94a8

… the v1.0.5 Levitus initial data

fixed date bugs in nemo_postprocessing.sh

1e35383

added test queue on HLRN4 machines

3195b9a

Merge pull request #908 from esm-tools/feature/add-eORCA025-standalone

2c399da

Feature/add eorca025 standalone

remove set -vx

6ceb634

focioifs-3.0 compiles, won't run as now NEMO4.2 specific adjustments …

6c570a2

…have been made updated nemo4 example standalone runscripts.

add _nemo4 to compile settings for glogin

4e859e6

uncomment compiler_mpi in blogin.yaml again

fix a typo in blogin.yaml

4126a2e

add TCO95_eORCA025 switch

3b77561

change xml files for NEMO4, and add new OpenIFS dev branch for 3.0

743d3dc

joakimkjellsson and others added 30 commits September 3, 2024 17:09

update oifs env for new nesh, and remove mistral settings

50b4295

switch to new compilers, icc->icx, ifort->ifx

beafb60

set default nest1: false, instead of no. focioifs.yaml needs to evalu…

9b56521

…ate nest1 as true or false

add restart file to restart Tco399+ORCA12 on glogin new nodes

f8ad9dd

fix small syntax error for nesh.yaml

51c91f2

Merge branch 'geomar_dev' of https://github.com/esm-tools/esm_tools i…

5472722

…nto geomar_dev

fix(esm_parser.py): no more complex numbers

527416d

added missing IDEAL tracer definition for FOCI_AGRIF_MOPS configuration

ce1ae1b

Added missing configuration for foci_mops

834cc90

Adapted runscripts to a pre final version -> further test necessary

c23c968

Merge remote-tracking branch 'origin/geomar_dev' into geomar

8fbc557

Merge remote-tracking branch 'origin/feature/mops_agrif_direct_coupli…

bb0c71c

…ng' into geomar_dev merge Tronje's MOPS developments into geomar_dev

make FOCI-MOPS work again after the merge of Tronjes and

0716a9f

Joakims developments, remove a few hardcoded paths

added some comments on namelist changes for nemo in FOCI-OpenIFS 4.0

afd19f6

Ladies and Gentlemen! Introducing: FOCI-OpenIFS 4.1 with eORCA05.L75 …

6d97451

…grid

Merge branch 'release' into feature/merge_release_geomar_dev

1b276bd

Merge remote-tracking branch 'origin/release' into feature/merge_rele…

63783d3

…ase_geomar_dev

Added a yaml file to restart ESM simulations with ssp scenarios from …

3d00162

…2014 with FOCI-MOPS and added bugfixes to the config files.

Merge branch 'geomar_dev' of https://github.com/esm-tools/esm_tools i…

b798691

…nto geomar_dev

Merge branch 'geomar_dev' into geomar

a50f001

fixed name pattern for glogin standard96 compute nodes

5c66d73

Merge branch 'geomar_dev' into geomar

aca32a9

Update oasis.py

f10a75f

Bugfix bracket not closed

Added git to the modules. This is no more a standard librabry since t…

73161e6

…he update.

load git-lfs by default as no system git is available anymore

f33fa89

fix a merge error in geomar branch

0ce9f6e

fixed echam monitoring, added comment to NEMO monitoring

445a7b9

added perl modules for XIOS, NEMO and OIFS compilation, replaces cust…

6655469

…om perl installation

added draft for FOCIOIFS-4.0 runscript on levante for Rene

6601375

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Merge latest developments from GEOMAR into release #1138

Merge latest developments from GEOMAR into release #1138

seb-wahl commented Feb 19, 2024

Merge latest developments from GEOMAR into release #1138

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Merge latest developments from GEOMAR into release #1138

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seb-wahl commented Feb 19, 2024