diff --git a/.coveragerc b/.coveragerc
index a1bf8c4..9959552 100644
--- a/.coveragerc
+++ b/.coveragerc
@@ -2,10 +2,10 @@
 [run]
 branch = True
 source = hyo2.ssm2
-omit =
-    hyo2/ssm2/app/*
 
 [report]
+omit = */app/*
+
 # Regexes for lines to exclude from consideration
 exclude_lines =
     # Have to re-enable the standard pragma
diff --git a/.github/workflows/ssm_on_windows.yml b/.github/workflows/ssm_on_windows.yml
index f898db7..11c1f55 100644
--- a/.github/workflows/ssm_on_windows.yml
+++ b/.github/workflows/ssm_on_windows.yml
@@ -35,6 +35,6 @@ jobs:
     - name: Test with pytest
       run: |
         pip install coveralls PyYAML pytest pytest-cov
-        py.test --cov --cov-config=.coveragerc
+        py.test --cov-config=.coveragerc --cov
         coverage report -m
-        coveralls
+        coveralls --rcfile=.coveragerc
diff --git a/hyo2/ssm2/lib/atlas/rtofs.py b/hyo2/ssm2/lib/atlas/rtofs.py
index 9d5a380..dadc0d2 100644
--- a/hyo2/ssm2/lib/atlas/rtofs.py
+++ b/hyo2/ssm2/lib/atlas/rtofs.py
@@ -104,6 +104,7 @@ def is_present(self) -> bool:
         return self._has_data_loaded
 
     def _clean_rtofs_folder(self, skip_folder: str | None = None) -> None:
+        # logger.debug("RTOFS folder to clean: %s" % self.data_folder)
         for item in os.listdir(self.data_folder):
             full_path = os.path.join(self.data_folder, item)